[ { "title": "The SOCS-box of HIV-1 Vif interacts with ElonginBC by induced-folding to recruit its Cul5-containing ubiquitin ligase complex.", "journal": "PLoS Pathog.", "date": "2010", "authors": "Bergeron Julien R C, Huthoff Hendrik, Veselkov Dennis A, Beavil Rebecca L, Simpson Peter J, Matthews Stephen J, Malim Michael H, Sanderson Mark R", "reference": { "type": "PubMed", "id": "20532212", "url": "https://pubmed.ncbi.nlm.nih.gov/20532212" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93034-1", "protein_name": "Cullin-5", "gene_name": "CUL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15369-1", "protein_name": "Elongin-C", "gene_name": "ELOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15370-1", "protein_name": "Elongin-B", "gene_name": "ELOB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q93034", "url": "https://www.uniprot.org/uniprotkb/Q93034" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20532212", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Kaposi's sarcoma-associated herpesvirus-encoded latency-associated nuclear antigen reduces interleukin-8 expression in endothelial cells and impairs neutrophil chemotaxis by degrading nuclear p65.", "journal": "J. Virol.", "date": "2011", "authors": "Li Xiaofan, Liang Deguang, Lin Xianzhi, Robertson Erle S, Lan Ke", "reference": { "type": "PubMed", "id": "21697472", "url": "https://pubmed.ncbi.nlm.nih.gov/21697472" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93034-1", "protein_name": "Cullin-5", "gene_name": "CUL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15369-1", "protein_name": "Elongin-C", "gene_name": "ELOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15370-1", "protein_name": "Elongin-B", "gene_name": "ELOB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04206-1", "protein_name": "Transcription factor p65", "gene_name": "RELA", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q93034", "url": "https://www.uniprot.org/uniprotkb/Q93034" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": 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Norstedt Gunnar, Flores-Morales Amilcar", "reference": { "type": "PubMed", "id": "21980433", "url": "https://pubmed.ncbi.nlm.nih.gov/21980433" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93034-1", "protein_name": "Cullin-5", "gene_name": "CUL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBF6-1", "protein_name": "RING-box protein 2", "gene_name": "RNF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15369-1", "protein_name": "Elongin-C", "gene_name": "ELOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10912-1", "protein_name": "Growth hormone receptor", "gene_name": "GHR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15370-1", "protein_name": "Elongin-B", "gene_name": "ELOB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14508-1", "protein_name": "Suppressor of cytokine signaling 2", "gene_name": "SOCS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16882-1", "protein_name": "Growth hormone receptor", 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Biol. Chem.", "date": "2017", "authors": "Weems JC, Slaughter BD, Unruh JR, Boeing S, Hall SM, McLaird MB, Yasukawa T, Aso T, Svejstrup JQ, Conaway JW, Conaway RC", "reference": { "type": "PubMed", "id": "28292928", "url": "https://pubmed.ncbi.nlm.nih.gov/28292928" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93034-1", "protein_name": "Cullin-5", "gene_name": "CUL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14241-2", "protein_name": "Elongin-A", "gene_name": "ELOA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03468-1", "protein_name": "DNA excision repair protein ERCC-6", "gene_name": "ERCC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63187-1", "protein_name": "Elongin-A", "gene_name": "Eloa", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q93034", "url": "https://www.uniprot.org/uniprotkb/Q93034" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28292928", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "BIK ubiquitination by the E3 ligase Cul5-ASB11 determines cell fate during cellular stress.", "journal": "J. Cell Biol.", "date": "2019", "authors": "Chen FY, Huang MY, Lin YM, Ho CH, Lin SY, Chen HY, Hung MC, Chen RH", "reference": { "type": "PubMed", "id": "31387940", "url": "https://pubmed.ncbi.nlm.nih.gov/31387940" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93034-1", "protein_name": "Cullin-5", "gene_name": "CUL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBF6-1", "protein_name": "RING-box protein 2", "gene_name": "RNF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15369-1", "protein_name": "Elongin-C", "gene_name": "ELOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15370-1", "protein_name": "Elongin-B", "gene_name": "ELOB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXH4-1", "protein_name": "Ankyrin repeat and SOCS box protein 11", "gene_name": "ASB11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13323-1", "protein_name": "Bcl-2-interacting killer", "gene_name": "BIK", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q93034", "url": "https://www.uniprot.org/uniprotkb/Q93034" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31387940", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure and dynamics of the ASB9 CUL-RING E3 ligase.", "journal": "Nat. 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[] } ] }, { "title": "Rab40-Cullin5 complex regulates EPLIN and actin cytoskeleton dynamics during cell migration.", "journal": "The Journal of cell biology", "date": "2021", "authors": "Linklater ES, Duncan ED, Han KJ, Kaupinis A, Valius M, Lyons TR, Prekeris R", "reference": { "type": "PubMed", "id": "33999101", "url": "https://pubmed.ncbi.nlm.nih.gov/33999101" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93034-1", "protein_name": "Cullin-5", "gene_name": "CUL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHB6-1", "protein_name": "LIM domain and actin-binding protein 1", "gene_name": "LIMA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12829-1", "protein_name": "Ras-related protein Rab-40B", "gene_name": "RAB40B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q93034", "url": "https://www.uniprot.org/uniprotkb/Q93034" } ], "common_name": "Human", 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Decreased cell directionality, chemotactic migration and invasion. Decreased levels of actin ruffles. 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Decreased localization to the plasma membrane; increaded localization to lysosomes and late endosomes.", "evidence": [ { "database": "UniProtKB", "id": "P10114", "url": "https://www.uniprot.org/uniprotkb/P10114" }, { "database": "PubMed", "id": "1900290", "url": "https://pubmed.ncbi.nlm.nih.gov/1900290" }, { "database": "PubMed", "id": "15342639", "url": "https://pubmed.ncbi.nlm.nih.gov/15342639" }, { "database": "PubMed", "id": "35293963", "url": "https://pubmed.ncbi.nlm.nih.gov/35293963" } ], "uniprot_canonical_ac": "P10114-1" } ], "record_id": "pubmed.35293963", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human Protein-l-isoaspartate O-Methyltransferase Domain-Containing Protein 1 (PCMTD1) Associates with Cullin-RING Ligase Proteins.", "journal": "Biochemistry", "date": "2022", "authors": "Warmack RA, Pang EZ, Peluso E, Lowenson JD, Ong JY, Torres JZ, Clarke SG", "reference": { "type": "PubMed", "id": "35486881", "url": "https://pubmed.ncbi.nlm.nih.gov/35486881" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93034-1", "protein_name": "Cullin-5", "gene_name": "CUL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15369-1", "protein_name": "Elongin-C", "gene_name": "ELOC", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and analysis of expression of human VACM-1, a cullin gene family member located on chromosome 11q22-23.", "journal": "Genome research", "date": "1997-01", "authors": "Byrd P J, Stankovic T, McConville C M, Smith A D, Cooper P R, Taylor A M", "reference": { "type": "PubMed", "id": "9037604", "url": "https://pubmed.ncbi.nlm.nih.gov/9037604" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93034-1", "protein_name": "Cullin-5", "gene_name": "CUL5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q93034", "url": "https://www.uniprot.org/uniprotkb/Q93034" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9037604", "abstract": "", "glycosylation": [], 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{ "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nedd8 modification of cul-1 activates SCF(beta(TrCP))-dependent ubiquitination of IkappaBalpha.", "journal": "Molecular and cellular biology", "date": "2000", "authors": "Read MA, Brownell JE, Gladysheva TB, Hottelet M, Parent LA, Coggins MB, Pierce JW, Podust VN, Luo RS, Chau V, Palombella VJ", "reference": { "type": "PubMed", "id": "10713156", "url": "https://pubmed.ncbi.nlm.nih.gov/10713156" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10713156", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Yeast homolog of human SAG/ROC2/Rbx2/Hrt2 is essential for cell growth, but not for germination: chip profiling implicates its role in cell cycle regulation.", "journal": "Oncogene", "date": "2000", "authors": "Swaroop M, Wang Y, Miller P, Duan H, Jatkoe T, Madore SJ, Sun Y", "reference": { "type": "PubMed", "id": "10851089", "url": "https://pubmed.ncbi.nlm.nih.gov/10851089" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBF6-1", "protein_name": "RING-box protein 2", "gene_name": "RNF7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10851089", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural basis for phosphodependent substrate selection and orientation by the SCFCdc4 ubiquitin ligase.", "journal": "Cell", "date": "2003", "authors": "Orlicky S, Tang X, Willems A, Tyers M, Sicheri F", "reference": { "type": "PubMed", "id": "12553912", "url": "https://pubmed.ncbi.nlm.nih.gov/12553912" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46531-1", "protein_name": "Neurogenic locus notch homolog protein 1", "gene_name": "NOTCH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62877-1", "protein_name": "E3 ubiquitin-protein ligase RBX1", "gene_name": "RBX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52286-1", "protein_name": "Suppressor of kinetochore protein 1", "gene_name": "SKP1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P63208-1", "protein_name": "S-phase kinase-associated protein 1", "gene_name": "SKP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12553912", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Fbx7 functions in the SCF complex regulating Cdk1-cyclin B-phosphorylated hepatoma up-regulated protein (HURP) proteolysis by a proline-rich region.", "journal": "J. Biol. Chem.", "date": "2004", "authors": "Hsu JM, Lee YC, Yu CT, Huang CY", "reference": { "type": "PubMed", "id": "15145941", "url": "https://pubmed.ncbi.nlm.nih.gov/15145941" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06493-1", "protein_name": "Cyclin-dependent kinase 1", "gene_name": "CDK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15398-2", "protein_name": "Disks large-associated protein 5", "gene_name": "DLGAP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3I1-1", "protein_name": "F-box only protein 7", "gene_name": "FBXO7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], 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Acta", "date": "2006", "authors": "Maragno AL, Baqui MM, Gomes MD", "reference": { "type": "PubMed", "id": "16714087", "url": "https://pubmed.ncbi.nlm.nih.gov/16714087" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q641X7-1", "protein_name": "F-box only protein 25", "gene_name": "Fbxo25", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q91Z62-1", "protein_name": "F-box only protein 32", "gene_name": "Fbxo32", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9D2Y6-1", "protein_name": "F-box only protein 25", "gene_name": "Fbxo25", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16714087", 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Cell. Biol.", "date": "2006", "authors": "Sabile A, Meyer AM, Wirbelauer C, Hess D, Kogel U, Scheffner M, Krek W", "reference": { "type": "PubMed", "id": "16880511", "url": "https://pubmed.ncbi.nlm.nih.gov/16880511" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13309-1", "protein_name": "S-phase kinase-associated protein 2", "gene_name": "SKP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKB1-1", "protein_name": "F-box/WD repeat-containing protein 11", "gene_name": "FBXW11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46527-1", "protein_name": "Cyclin-dependent kinase inhibitor 1B", "gene_name": "CDKN1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19474-1", "protein_name": "E3 ubiquitin-protein ligase TRIM21", "gene_name": "TRIM21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63208-1", "protein_name": "S-phase 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Chem.", "date": "2007", "authors": "Abida WM, Nikolaev A, Zhao W, Zhang W, Gu W", "reference": { "type": "PubMed", "id": "17098746", "url": "https://pubmed.ncbi.nlm.nih.gov/17098746" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XK2-1", "protein_name": "F-box only protein 11", "gene_name": "FBXO11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17098746", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of cullin-based E3 ubiquitin ligases in intact mammalian cells -- evidence for cullin dimerization.", "journal": "Cell. 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Biol. Chem.", "date": "2008", "authors": "Glenn KA, Nelson RF, Wen HM, Mallinger AJ, Paulson HL", "reference": { "type": "PubMed", "id": "18203720", "url": "https://pubmed.ncbi.nlm.nih.gov/18203720" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6DIA9-1", "protein_name": "F-box only protein 27", "gene_name": "Fbxo27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9QZM8-1", "protein_name": "F-box only protein 17", "gene_name": "Fbxo17", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8NI29-1", "protein_name": "F-box only protein 27", "gene_name": "FBXO27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRD1-1", "protein_name": "F-box only protein 6", "gene_name": "FBXO6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BK26-1", "protein_name": "F-box only protein 44", "gene_name": "Fbxo44", "tax_name": "Mouse" }, { 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Antioxidant-induced phosphorylation of tyrosine 486 leads to rapid nuclear export of Bach1 that allows Nrf2 to bind to the antioxidant response element and activate defensive gene expression.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Kaspar JW, Jaiswal AK", "reference": { "type": "PubMed", "id": "19897490", "url": "https://pubmed.ncbi.nlm.nih.gov/19897490" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": 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"title": "Related F-box proteins control cell death in Caenorhabditis elegans and human lymphoma.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2013", "authors": "Chiorazzi M, Rui L, Yang Y, Ceribelli M, Tishbi N, Maurer CW, Ranuncolo SM, Zhao H, Xu W, Chan WC, Jaffe ES, Gascoyne RD, Campo E, Rosenwald A, Ott G, Delabie J, Rimsza LM, Shaham S, Staudt LM", "reference": { "type": "PubMed", "id": "23431138", "url": "https://pubmed.ncbi.nlm.nih.gov/23431138" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10415-1", "protein_name": "Apoptosis regulator Bcl-2", "gene_name": "BCL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK96-1", "protein_name": "F-box only protein 10", "gene_name": "FBXO10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63208-1", "protein_name": "S-phase 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Myeloma overexpressed 2 (Myeov2) regulates L11 subnuclear localization through Nedd8 modification.", "journal": "PLoS ONE", "date": "2013", "authors": "Ebina M, Tsuruta F, Katoh MC, Kigoshi Y, Someya A, Chiba T", "reference": { "type": "PubMed", "id": "23776465", "url": "https://pubmed.ncbi.nlm.nih.gov/23776465" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXC6-2", "protein_name": "COP9 signalosome complex subunit 9", "gene_name": "COPS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13618-1", "protein_name": "Cullin-3", "gene_name": "CUL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92905-1", "protein_name": "COP9 signalosome complex subunit 5", "gene_name": "COPS5", "tax_name": "Human" } ], 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Parallel SCF adaptor capture proteomics reveals a role for SCFFBXL17 in NRF2 activation via BACH1 repressor turnover.", "journal": "Molecular cell", "date": "2013", "authors": "Tan MK, Lim HJ, Bennett EJ, Shi Y, Harper JW", "reference": { "type": "PubMed", "id": "24035498", "url": "https://pubmed.ncbi.nlm.nih.gov/24035498" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13309-1", "protein_name": "S-phase kinase-associated protein 2", "gene_name": "SKP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62877-1", "protein_name": "E3 ubiquitin-protein ligase RBX1", "gene_name": "RBX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60675-1", "protein_name": "Transcription factor MafK", "gene_name": "MAFK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF56-1", "protein_name": "F-box/LRR-repeat protein 17", "gene_name": "FBXL17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14867-1", "protein_name": "Transcription regulator protein BACH1", "gene_name": "BACH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63208-1", "protein_name": "S-phase kinase-associated protein 1", "gene_name": "SKP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24035498", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Oncogenic function of SCCRO5/DCUN1D5 requires its Neddylation E3 activity and nuclear localization.", "journal": "Clin. Cancer Res.", "date": "2014", "authors": "Bommelje CC, Weeda VB, Huang G, Shah K, Bains S, Buss E, Shaha M, Gonen M, Ghossein R, Ramanathan SY, Singh B", "reference": { "type": "PubMed", "id": "24192928", "url": "https://pubmed.ncbi.nlm.nih.gov/24192928" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62877-1", "protein_name": "E3 ubiquitin-protein ligase RBX1", "gene_name": "RBX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61081-1", "protein_name": "NEDD8-conjugating enzyme Ubc12", "gene_name": "UBE2M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13618-1", "protein_name": "Cullin-3", "gene_name": "CUL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13617-1", "protein_name": "Cullin-2", "gene_name": "CUL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86VP6-1", "protein_name": "Cullin-associated NEDD8-dissociated protein 1", "gene_name": "CAND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTE7-1", "protein_name": "DCN1-like protein 5", "gene_name": "DCUN1D5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 195, "end_pos": 195, "sequence_org": "D", "sequence_mut": "N", "comment": "Loss of interaction with RBX1, CUL1 and CAND1.", "evidence": [ { "database": "UniProtKB", "id": "Q9BTE7", "url": "https://www.uniprot.org/uniprotkb/Q9BTE7" }, { "database": "PubMed", "id": "24192928", "url": "https://pubmed.ncbi.nlm.nih.gov/24192928" } ], "uniprot_canonical_ac": "Q9BTE7-1" }, { "start_pos": 219, "end_pos": 219, "sequence_org": "A", "sequence_mut": "R", "comment": "Loss of interaction with RBX1, CUL1 and CAND1. Loss of interaction with CUL1, CUL2, CUL3, CUL4A, CUL5, CAND1 and RBX1; when associated with A-195 and A-225. Does not affect localization at nucleus; when associated with A-195 and A-225.", "evidence": [ { "database": "UniProtKB", "id": "Q9BTE7", "url": "https://www.uniprot.org/uniprotkb/Q9BTE7" }, { "database": "PubMed", "id": "26906416", "url": "https://pubmed.ncbi.nlm.nih.gov/26906416" }, { "database": "PubMed", "id": "24192928", "url": "https://pubmed.ncbi.nlm.nih.gov/24192928" } ], "uniprot_canonical_ac": "Q9BTE7-1" }, { "start_pos": 225, "end_pos": 225, "sequence_org": "D", "sequence_mut": "N", "comment": "Loss of interaction with RBX1, CUL1, CUL2, CUL3 and CAND1. Does not affect interaction with UBE2M and NEDD8. Fails to augment Cul3 neddylation beyond basal levels.", "evidence": [ { "database": "UniProtKB", "id": "Q9BTE7", "url": "https://www.uniprot.org/uniprotkb/Q9BTE7" }, { "database": "PubMed", "id": "24192928", "url": "https://pubmed.ncbi.nlm.nih.gov/24192928" } ], "uniprot_canonical_ac": "Q9BTE7-1" }, { "start_pos": 226, "end_pos": 226, "sequence_org": "E", "sequence_mut": "A", "comment": "Loss of interaction with RBX1, CUL1, CUL2, CUL3 and CAND1. Does not affect interaction with UBE2M and NEDD8. Fails to augment Cul3 neddylation beyond basal levels.", "evidence": [ { "database": "UniProtKB", "id": "Q9BTE7", "url": "https://www.uniprot.org/uniprotkb/Q9BTE7" }, { "database": "PubMed", "id": "24192928", "url": "https://pubmed.ncbi.nlm.nih.gov/24192928" } ], "uniprot_canonical_ac": "Q9BTE7-1" } ], "record_id": "pubmed.24192928", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Degradation of Cep68 and PCNT cleavage mediate Cep215 removal from the PCM to allow centriole separation, disengagement and licensing.", "journal": "Nature cell biology", "date": "2015", "authors": "Pagan JK, Marzio A, Jones MJ, Saraf A, Jallepalli PV, Florens L, Washburn MP, Pagano M", "reference": { "type": "PubMed", "id": "25503564", "url": "https://pubmed.ncbi.nlm.nih.gov/25503564" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53350-1", "protein_name": "Serine/threonine-protein kinase PLK1", "gene_name": "PLK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95613-1", "protein_name": "Pericentrin", "gene_name": "PCNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SN8-1", "protein_name": "CDK5 regulatory subunit-associated protein 2", "gene_name": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Multiple UBXN family members inhibit retrovirus and lentivirus production and canonical NFkappaBeta signaling by stabilizing IkappaBalpha.", "journal": "PLoS Pathog.", "date": "2017", "authors": "Hu Y, O'Boyle K, Auer J, Raju S, You F, Wang P, Fikrig E, Sutton RE", "reference": { "type": "PubMed", "id": "28152074", "url": "https://pubmed.ncbi.nlm.nih.gov/28152074" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04323-1", "protein_name": "UBX domain-containing protein 1", "gene_name": "UBXN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": 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"Muhar Matthias F, Farnung Jakob, Cernakova Martina, Hofmann Raphael, Henneberg Lukas T, Pfleiderer Moritz M, Denoth-Lippuner Annina, Kal\u010dic Filip, Nievergelt Ajse S, Peters Al-Bayati Marwa, Sidiropoulos Nikolaos D, Beier Viola, Mann Matthias, Jessberger Sebastian, Jinek Martin, Schulman Brenda A, Bode Jeffrey W, Corn Jacob E", "reference": { "type": "PubMed", "id": "39880951", "url": "https://pubmed.ncbi.nlm.nih.gov/39880951" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XUX0-1", "protein_name": "F-box only protein 31", "gene_name": "FBXO31", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 309, "end_pos": 309, "sequence_org": "Y", "sequence_mut": "A", "comment": "Abolished ability to promote ubiquitination of amidated proteins.", "evidence": [ { "database": "UniProtKB", "id": "Q5XUX0", "url": "https://www.uniprot.org/uniprotkb/Q5XUX0" }, { "database": "PubMed", "id": "39880951", "url": "https://pubmed.ncbi.nlm.nih.gov/39880951" } ], "uniprot_canonical_ac": "Q5XUX0-1" }, { "start_pos": 337, "end_pos": 337, "sequence_org": "I", "sequence_mut": "D", "comment": "Abolished ability to promote ubiquitination of amidated proteins.", "evidence": [ { "database": "UniProtKB", "id": "Q5XUX0", "url": "https://www.uniprot.org/uniprotkb/Q5XUX0" }, { "database": "PubMed", "id": "39880951", "url": "https://pubmed.ncbi.nlm.nih.gov/39880951" } ], "uniprot_canonical_ac": "Q5XUX0-1" }, { "start_pos": 343, "end_pos": 343, "sequence_org": "T", "sequence_mut": "V", "comment": "Abolished ability to promote ubiquitination of amidated proteins.", "evidence": [ { 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"cul-1 is required for cell cycle exit in C. elegans and identifies a novel gene family.", "journal": "Cell", "date": "1996", "authors": "Kipreos ET, Lander LE, Wing JP, He WW, Hedgecock EM", "reference": { "type": "PubMed", "id": "8681378", "url": "https://pubmed.ncbi.nlm.nih.gov/8681378" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13618-1", "protein_name": "Cullin-3", "gene_name": "CUL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13617-1", "protein_name": "Cullin-2", "gene_name": "CUL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13619-1", "protein_name": "Cullin-4A", "gene_name": "CUL4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13620-2", "protein_name": "Cullin-4B", "gene_name": "CUL4B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", 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regulator gene, which maps to chromosome 21q22.1.", "journal": "Human genetics", "date": "1998", "authors": "Blouin JL, Duriaux Sail G, Guipponi M, Rossier C, Pappasavas MP, Antonarakis SE", "reference": { "type": "PubMed", "id": "9544839", "url": "https://pubmed.ncbi.nlm.nih.gov/9544839" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13309-1", "protein_name": "S-phase kinase-associated protein 2", "gene_name": "SKP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62877-1", "protein_name": "E3 ubiquitin-protein ligase RBX1", "gene_name": "RBX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60675-1", "protein_name": "Transcription factor MafK", "gene_name": "MAFK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF56-1", "protein_name": "F-box/LRR-repeat protein 17", "gene_name": "FBXL17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14867-1", "protein_name": "Transcription regulator protein BACH1", "gene_name": "BACH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63208-1", "protein_name": "S-phase kinase-associated protein 1", "gene_name": "SKP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human CUL-1, but not other cullin family members, selectively interacts with SKP1 to form a complex with SKP2 and cyclin A.", "journal": "Cell growth & differentiation : the molecular biology journal of the American Association for Cancer Research", "date": "1998-06", "authors": "Michel J J, Xiong Y", "reference": { "type": "PubMed", "id": "9663463", "url": "https://pubmed.ncbi.nlm.nih.gov/9663463" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13618-1", "protein_name": "Cullin-3", "gene_name": "CUL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9WTX6-1", "protein_name": "Cullin-1", "gene_name": "Cul1", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q13616", "url": "https://www.uniprot.org/uniprotkb/Q13616" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9663463", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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Mol. Genet.", "date": "2010", "authors": "Rothenberg C, Srinivasan D, Mah L, Kaushik S, Peterhoff CM, Ugolino J, Fang S, Cuervo AM, Nixon RA, Monteiro MJ", "reference": { "type": "PubMed", "id": "20529957", "url": "https://pubmed.ncbi.nlm.nih.gov/20529957" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H492-1", "protein_name": "Microtubule-associated protein 1 light chain 3 alpha", "gene_name": "MAP1LC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHD9-1", "protein_name": "Ubiquilin-2", "gene_name": "UBQLN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXW4-1", "protein_name": "Microtubule-associated protein 1 light chain 3 gamma", "gene_name": "MAP1LC3C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZQ8-1", "protein_name": "Microtubule-associated protein 1 light chain 3 beta", "gene_name": "MAP1LC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMX0-1", "protein_name": "Ubiquilin-1", "gene_name": "UBQLN1", "tax_name": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Adaptor complex AP2/PICALM, through interaction with LC3, targets Alzheimer's APP-CTF for terminal degradation via autophagy.", "journal": "Proc. 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U.S.A.", "date": "2013", "authors": "Tian Yuan, Chang Jerry C, Fan Emily Y, Flajolet Marc, Greengard Paul", "reference": { "type": "PubMed", "id": "24067654", "url": "https://pubmed.ncbi.nlm.nih.gov/24067654" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H492-1", "protein_name": "Microtubule-associated protein 1 light chain 3 alpha", "gene_name": "MAP1LC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13492-1", "protein_name": "Phosphatidylinositol-binding clathrin assembly protein", "gene_name": "PICALM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H492", "url": "https://www.uniprot.org/uniprotkb/Q9H492" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24067654", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ 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"FEBS letters", "date": "2011", "authors": "Zou X, Shen J, Chen F, Ting K, Zheng Z, Pang S, Zara JN, Adams JS, Soo C, Zhang X", "reference": { "type": "PubMed", "id": "21723284", "url": "https://pubmed.ncbi.nlm.nih.gov/21723284" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q92832-1", "protein_name": "Protein kinase C-binding protein NELL1", "gene_name": "NELL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UW56-1", "protein_name": "All-trans retinoic acid-induced differentiation factor", "gene_name": "ATRAID", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q92832", "url": "https://www.uniprot.org/uniprotkb/Q92832" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21723284", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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