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Cell. Biol.", "date": "2013", "authors": "Y\u00fcce \u00d6zlem, West Stephen C", "reference": { "type": "PubMed", "id": "23149945", "url": "https://pubmed.ncbi.nlm.nih.gov/23149945" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z333-1", "protein_name": "Helicase senataxin", "gene_name": "SETX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13263-1", "protein_name": "Transcription intermediary factor 1-beta", "gene_name": "TRIM28", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78527-1", "protein_name": "DNA-dependent protein kinase catalytic subunit", "gene_name": "PRKDC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23149945", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GANP regulates recruitment of AID to immunoglobulin variable regions by modulating transcription and nucleosome occupancy.", "journal": "Nat. Commun.", "date": "2013", "authors": "Singh SK, Maeda K, Eid MM, Almofty SA, Ono M, Pham P, Goodman MF, Sakaguchi N", "reference": { "type": "PubMed", "id": "23652018", "url": "https://pubmed.ncbi.nlm.nih.gov/23652018" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11388-1", "protein_name": "DNA topoisomerase 2-alpha", "gene_name": "TOP2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9WUU9-1", "protein_name": "Germinal-center associated nuclear protein", "gene_name": "Mcm3ap", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NR30-1", "protein_name": "Nucleolar RNA helicase 2", "gene_name": "DDX21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08211-1", "protein_name": "ATP-dependent RNA helicase A", "gene_name": "DHX9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49790-1", "protein_name": "Nuclear pore complex protein Nup153", "gene_name": "NUP153", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60318-1", "protein_name": "Germinal-center associated nuclear protein", "gene_name": "MCM3AP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00267-1", "protein_name": "Transcription elongation factor SPT5", "gene_name": "SUPT5H", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00148-1", "protein_name": "ATP-dependent RNA helicase DDX39A", "gene_name": "DDX39A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P37198-1", "protein_name": "Nuclear pore glycoprotein p62", "gene_name": "NUP62", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23652018", "abstract": "", "glycosylation": [], 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural mimicry in transcription regulation of human RNA polymerase II by the DNA helicase RECQL5.", "journal": "Nature structural & molecular biology", "date": "2013-07", "authors": "Kassube Susanne A, Jinek Martin, Fang Jie, Tsutakawa Susan, Nogales Eva", "reference": { "type": "PubMed", "id": "23748380", "url": "https://pubmed.ncbi.nlm.nih.gov/23748380" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94762-1", "protein_name": "ATP-dependent DNA helicase Q5", "gene_name": "RECQL5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23748380", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Loss of acetylation and loss of regulation of growth-factor-induced gene expression; when associated with R-1838; R-1859; R-1866; R-1887; R-1908; R-1922 and R-1936.", "evidence": [ { "database": "UniProtKB", "id": "P08775", "url": "https://www.uniprot.org/uniprotkb/P08775" }, { "database": "PubMed", "id": "24207025", "url": "https://pubmed.ncbi.nlm.nih.gov/24207025" }, { "database": "PubMed", "id": "17526739", "url": "https://pubmed.ncbi.nlm.nih.gov/17526739" } ], "uniprot_canonical_ac": "P08775-1" }, { "start_pos": 1887, "end_pos": 1887, "sequence_org": "K", "sequence_mut": "R", "comment": "Loss of ubiquitination, no effect on interaction with WWP2; when associated with R-1859; R-1866; R-1873; R-1908 and R-1922. 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"uniprot_canonical_ac": "P24928-1" }, { "start_pos": 1930, "end_pos": 1930, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "Phosphotyrosine", "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" }, { "database": "PubMed", "id": "26566685", "url": "https://pubmed.ncbi.nlm.nih.gov/26566685" }, { "database": "iPTMnet", "id": "P24928", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P24928" }, { "database": "PubMed", "id": "15144186", "url": "https://pubmed.ncbi.nlm.nih.gov/15144186" }, { "database": "PubMed", "id": "19413330", "url": "https://pubmed.ncbi.nlm.nih.gov/19413330" } ], "site_lbl": "Tyr1930", "uniprot_canonical_ac": "P24928-1" }, { "start_pos": 1931, "end_pos": 1931, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" }, { "database": "PubMed", "id": "21406692", "url": "https://pubmed.ncbi.nlm.nih.gov/21406692" }, { "database": "PubMed", "id": "19690332", "url": "https://pubmed.ncbi.nlm.nih.gov/19690332" }, { "database": "PubMed", "id": "26566685", "url": "https://pubmed.ncbi.nlm.nih.gov/26566685" }, { "database": "iPTMnet", "id": "P24928", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P24928" } ], "site_lbl": "Ser1931", "uniprot_canonical_ac": "P24928-1" }, { "start_pos": 1933, "end_pos": 1933, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine", "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" }, { "database": "PubMed", "id": "26566685", "url": "https://pubmed.ncbi.nlm.nih.gov/26566685" }, { "database": "iPTMnet", "id": "P24928", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P24928" } ], "site_lbl": "Thr1933", "uniprot_canonical_ac": "P24928-1" } ], "record_id": "pubmed.26566685", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 33 }, { "field": "total_sites", "count": 33 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Selective Recognition of H3.1K36 Dimethylation/H4K16 Acetylation Facilitates the Regulation of All-trans-retinoic Acid (ATRA)-responsive Genes by Putative Chromatin Reader ZMYND8.", "journal": "J. Biol. Chem.", "date": "2016", "authors": "Adhikary Santanu, Sanyal Sulagna, Basu Moitri, Sengupta Isha, Sen Sabyasachi, Srivastava Dushyant Kumar, Roy Siddhartha, Das Chandrima", "reference": { "type": "PubMed", "id": "26655721", "url": "https://pubmed.ncbi.nlm.nih.gov/26655721" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15326-1", "protein_name": "Zinc finger MYND domain-containing protein 11", "gene_name": "ZMYND11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 227, "end_pos": 228, "sequence_org": "YN", "sequence_mut": "AA", "comment": "Decreases interaction with histone H3K4me0 and histone H4K16ac.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULU4", "url": "https://www.uniprot.org/uniprotkb/Q9ULU4" }, { "database": "PubMed", "id": "27477906", "url": "https://pubmed.ncbi.nlm.nih.gov/27477906" }, { "database": "PubMed", "id": "26655721", "url": "https://pubmed.ncbi.nlm.nih.gov/26655721" } ], "uniprot_canonical_ac": "Q9ULU4-1" }, { "start_pos": 307, "end_pos": 307, "sequence_org": "F", "sequence_mut": "A", "comment": "Severely decreases interaction with histone H3.1K36me2.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULU4", "url": "https://www.uniprot.org/uniprotkb/Q9ULU4" }, { "database": "PubMed", "id": "26655721", "url": "https://pubmed.ncbi.nlm.nih.gov/26655721" } ], "uniprot_canonical_ac": "Q9ULU4-1" } ], "record_id": "pubmed.26655721", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Methylation of RNA polymerase II non-consensus Lysine residues marks early transcription in mammalian cells.", "journal": "eLife", "date": "2015", "authors": "Dias JD, Rito T, Torlai Triglia E, Kukalev A, Ferrai C, Chotalia M, Brookes E, Kimura H, Pombo A", 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"database": "UniProtKB", "id": "P08775", "url": "https://www.uniprot.org/uniprotkb/P08775" }, { "database": "PubMed", "id": "26687004", "url": "https://pubmed.ncbi.nlm.nih.gov/26687004" } ], "uniprot_canonical_ac": "P08775-1" }, { "start_pos": 1859, "end_pos": 1859, "sequence_org": "K", "sequence_mut": "S", "comment": "Loss of methylation and dimethylation but no effect on phosphorylation; when associated with S-1838; S-1866; S-1873; S-1887; S-1908; S-1922 and S-1936. Highly decreases methylation and dimethylation; when associated with S-1866; S-1873; S-1887; S-1908; S-1922 and S-1936. Decreases methylation but no effect on dimethylation; when associated with S-1866; S-1887; S-1908 and S-1936.", "evidence": [ { "database": "UniProtKB", "id": "P08775", "url": "https://www.uniprot.org/uniprotkb/P08775" }, { "database": "PubMed", "id": "26687004", "url": "https://pubmed.ncbi.nlm.nih.gov/26687004" } ], "uniprot_canonical_ac": "P08775-1" }, { "start_pos": 1866, "end_pos": 1866, "sequence_org": "K", "sequence_mut": "S", "comment": "Loss of methylation and dimethylation but no effect on phosphorylation; when associated with S-1838; S-1859; S-1873; S-1887; S-1908; S-1922 and S-1936. Highly decreases methylation and dimethylation; when associated with S-1859; S-1873; S-1887; S-1908; S-1922 and S-1936. Decreases methylation but no effect on dimethylation; when associated with S-1859; S-1887; S-1908 and S-1936.", "evidence": [ { "database": "UniProtKB", "id": "P08775", "url": "https://www.uniprot.org/uniprotkb/P08775" }, { "database": "PubMed", "id": "26687004", "url": "https://pubmed.ncbi.nlm.nih.gov/26687004" } ], "uniprot_canonical_ac": "P08775-1" }, { "start_pos": 1873, "end_pos": 1873, "sequence_org": "K", "sequence_mut": "S", "comment": "Loss of methylation and dimethylation but no effect on phosphorylation; when associated with S-1838; S-1859; S-1866; S-1887; S-1908; S-1922 and S-1936. Highly decreases methylation and dimethylation; when associated with S-1859; S-1866; S-1887; S-1908 and S-1936.", "evidence": [ { "database": "UniProtKB", "id": "P08775", "url": "https://www.uniprot.org/uniprotkb/P08775" }, { "database": "PubMed", "id": "26687004", "url": "https://pubmed.ncbi.nlm.nih.gov/26687004" } ], "uniprot_canonical_ac": "P08775-1" }, { "start_pos": 1887, "end_pos": 1887, "sequence_org": "K", "sequence_mut": "S", "comment": "Loss of methylation and dimethylation but no effect on phosphorylation; when associated with S-1838; S-1859; S-1866; S-1873; S-1908; S-1922 and S-1936. Highly decreases methylation and dimethylation; when associated with S-1859; S-1866; S-1873; S-1908; S-1922 and S-1936. Decreases methylation but no effect on dimethylation; when associated with S-1859; S-1866; S-1908 and S-1936.", "evidence": [ { "database": "UniProtKB", "id": "P08775", "url": "https://www.uniprot.org/uniprotkb/P08775" }, { "database": "PubMed", "id": "26687004", "url": "https://pubmed.ncbi.nlm.nih.gov/26687004" } ], "uniprot_canonical_ac": "P08775-1" }, { "start_pos": 1908, "end_pos": 1908, "sequence_org": "K", "sequence_mut": "S", "comment": "Loss of methylation and dimethylation but no effect on phosphorylation; when associated with S-1838; S-1859; S-1866; S-1873; S-1887; S-1922 and S-1936. Highly decreases methylation and dimethylation; when associated with S-1859; S-1866; S-1873; S-1887; S-1922 and S-1936. Decreases methylation but no effect on dimethylation; when associated with S-1859; S-1866; S-1887 and S-1936.", "evidence": [ { "database": "UniProtKB", "id": "P08775", "url": "https://www.uniprot.org/uniprotkb/P08775" }, { "database": "PubMed", "id": "26687004", "url": "https://pubmed.ncbi.nlm.nih.gov/26687004" } ], "uniprot_canonical_ac": "P08775-1" }, { "start_pos": 1922, "end_pos": 1922, "sequence_org": "K", "sequence_mut": "S", "comment": "Loss of methylation and dimethylation but no effect on phosphorylation; when associated with S-1838; S-1859; S-1866; S-1873; S-1887; S-1908 and S-1936. Highly decreases methylation and dimethylation; when associated with S-1859; S-1866; S-1873; S-1887; S-1908 and S-1936.", "evidence": [ { "database": "UniProtKB", "id": "P08775", "url": "https://www.uniprot.org/uniprotkb/P08775" }, { "database": "PubMed", "id": "26687004", "url": "https://pubmed.ncbi.nlm.nih.gov/26687004" } ], "uniprot_canonical_ac": "P08775-1" }, { "start_pos": 1936, "end_pos": 1936, "sequence_org": "K", "sequence_mut": "S", "comment": "Loss of methylation and dimethylation but no effect on phosphorylation; when associated with S-1838; S-1859; S-1866; S-1873; S-1887; S-1908 and S-1922. Highly decreases methylation and dimethylation; when associated with S-1859; S-1866; S-1873; S-1887; S-1908 and S-1922. Decreases methylation but no effect on dimethylation; when associated with S-1859; S-1866 and S-1887.", "evidence": [ { "database": "UniProtKB", "id": "P08775", "url": "https://www.uniprot.org/uniprotkb/P08775" }, { "database": "PubMed", "id": "26687004", "url": "https://pubmed.ncbi.nlm.nih.gov/26687004" } ], "uniprot_canonical_ac": "P08775-1" } ], "record_id": "pubmed.26687004", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SMN and symmetric arginine dimethylation of RNA polymerase II C-terminal domain control termination.", "journal": "Nature", "date": "2016", "authors": "Zhao DY, Gish G, Braunschweig U, Li Y, Ni Z, Schmitges FW, Zhong G, Liu K, Li W, Moffat J, Vedadi M, Min J, Pawson TJ, Blencowe BJ, Greenblatt JF", "reference": { "type": "PubMed", "id": "26700805", "url": "https://pubmed.ncbi.nlm.nih.gov/26700805" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z333-1", "protein_name": "Helicase senataxin", "gene_name": "SETX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7E2-1", "protein_name": "Tudor domain-containing protein 3", "gene_name": "TDRD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14744-1", "protein_name": "Protein arginine N-methyltransferase 5", "gene_name": "PRMT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0D6-1", "protein_name": "5'-3' exoribonuclease 2", "gene_name": "XRN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16637-1", "protein_name": "Survival motor neuron protein", "gene_name": "SMN1; SMN2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 1810, "end_pos": 1810, "sequence_org": "R", "sequence_mut": "A", "comment": "Misexpression of a variety of small nuclear RNAs and small nucleolar RNAs. Loss of interaction with TDRD3 and SMN1/SMN2.", "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" }, { "database": "PubMed", "id": "26700805", "url": "https://pubmed.ncbi.nlm.nih.gov/26700805" }, { "database": "PubMed", "id": "21454787", "url": "https://pubmed.ncbi.nlm.nih.gov/21454787" } ], "uniprot_canonical_ac": "P24928-1" } ], "record_id": "pubmed.26700805", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Distributive O-GlcNAcylation on the Highly Repetitive C-Terminal Domain of RNA Polymerase II.", "journal": "Biochemistry", "date": "2016", "authors": "Lu L, Fan D, Hu CW, Worth M, Ma ZX, Jiang J", "reference": { "type": "PubMed", "id": "26807597", "url": "https://pubmed.ncbi.nlm.nih.gov/26807597" }, "referenced_glycans": [ { "glytoucan_ac": "G49108TO" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "glycosylation": [ { "glytoucan_ac": 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[] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 3 }, { "field": "total_sites", "count": 3 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 3 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 1 }, { "field": "exact_sites", "count": 3 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "exact_o_linked_glycan_sites", "count": 3 }, { "field": "exact_o_linked_glycans", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "filter_code", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human RNA Polymerase II Promoter Recruitment in Vitro Is Regulated by O-Linked N-Acetylglucosaminyltransferase (OGT).", "journal": "The Journal of biological chemistry", "date": "2016", "authors": "Lewis BA, Burlingame AL, 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therapeutics", "date": "2016", "authors": "Yi JM, Huan XJ, Song SS, Zhou H, Wang YQ, Miao ZH", "reference": { "type": "PubMed", "id": "27197304", "url": "https://pubmed.ncbi.nlm.nih.gov/27197304" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 1878, "end_pos": 1878, "kinase_uniprot_canonical_ac": "P50613-1", "kinase_gene_name": "CDK7", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "P24928", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/P24928" }, { "database": "PubMed", "id": "27197304", "url": 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"title": "Transcription Dynamics Prevent RNA-Mediated Genomic Instability through SRPK2-Dependent DDX23 Phosphorylation.", "journal": "Cell reports", "date": "2017", "authors": "Sridhara SC, Carvalho S, Grosso AR, Gallego-Paez LM, Carmo-Fonseca M, de Almeida SF", "reference": { "type": "PubMed", "id": "28076779", "url": "https://pubmed.ncbi.nlm.nih.gov/28076779" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUQ8-1", "protein_name": "Probable ATP-dependent RNA helicase DDX23", "gene_name": "DDX23", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96SB4-2", "protein_name": "SRSF protein kinase 1", "gene_name": "SRPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78362-1", "protein_name": "SRSF protein kinase 2", "gene_name": "SRPK2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", 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[] } ] }, { "title": "The human initiator is a distinct and abundant element that is precisely positioned in focused core promoters.", "journal": "Genes & development", "date": "2017-01-01", "authors": "Vo Ngoc Long, Cassidy California Jack, Huang Cassidy Yunjing, Duttke Sascha H C, Kadonaga James T", "reference": { "type": "PubMed", "id": "28108474", "url": "https://pubmed.ncbi.nlm.nih.gov/28108474" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28108474", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"database": "UniProtKB", "id": "P24928", "url": "https://www.uniprot.org/uniprotkb/P24928" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34526721", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ARMC5 is part of an RPB1-specific ubiquitin ligase implicated in adrenal hyperplasia.", "journal": "Nucleic acids research", "date": "2022", "authors": "Lao L, Bourdeau I, Gagliardi L, He X, Shi W, Hao B, Tan M, Hu Y, Peng J, Coulombe B, Torpy DJ, Scott HS, Lacroix A, Luo H, Wu J", "reference": { "type": "PubMed", "id": "35687106", "url": "https://pubmed.ncbi.nlm.nih.gov/35687106" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P24928-1", "protein_name": "DNA-directed RNA polymerase II subunit RPB1", "gene_name": "POLR2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5EBP3-1", "protein_name": "Armadillo repeat-containing protein 5", "gene_name": "Armc5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96C12-1", "protein_name": "Armadillo repeat-containing protein 5", "gene_name": "ARMC5", "tax_name": "Human" }, { 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"gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP 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"uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17624330", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"PubMed", "id": "18323778", "url": "https://pubmed.ncbi.nlm.nih.gov/18323778" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, mitochondrial", "gene_name": "ATP5MF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36542-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48201-1", "protein_name": "ATP synthase F(0) complex subunit C3, mitochondrial", "gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56385-1", "protein_name": "ATP synthase F(0) complex subunit e, mitochondrial", "gene_name": "ATP5ME", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06055-1", "protein_name": "ATP synthase F(0) complex subunit C2, mitochondrial", "gene_name": "ATP5MC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XKP0-1", "protein_name": "MICOS complex subunit MIC13", "gene_name": "MICOS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXV4-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": 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"taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18323778", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Structure of dimeric F1F0-ATP synthase.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Couoh-Cardel SJ, Uribe-Carvajal S, Wilkens S, Garcia-Trejo JJ", "reference": { "type": "PubMed", "id": "20833715", "url": "https://pubmed.ncbi.nlm.nih.gov/20833715" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, mitochondrial", "gene_name": "ATP5MF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36542-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48201-1", "protein_name": "ATP synthase F(0) complex subunit C3, mitochondrial", "gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56385-1", "protein_name": "ATP synthase F(0) complex subunit e, mitochondrial", "gene_name": "ATP5ME", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06055-1", "protein_name": "ATP synthase F(0) complex subunit C2, mitochondrial", "gene_name": "ATP5MC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XKP0-1", "protein_name": "MICOS complex subunit MIC13", "gene_name": "MICOS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXV4-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20833715", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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Biol. Chem.", "date": "2011", "authors": "Darshi M, Mendiola VL, Mackey MR, Murphy AN, Koller A, Perkins GA, Ellisman MH, Taylor SS", "reference": { "type": "PubMed", "id": "21081504", "url": "https://pubmed.ncbi.nlm.nih.gov/21081504" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BGH2-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "Samm50", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P58281-1", "protein_name": "Dynamin-like GTPase OPA1, mitochondrial", "gene_name": "Opa1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60313-1", "protein_name": "Dynamin-like GTPase OPA1, mitochondrial", "gene_name": "OPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9CRB9-1", "protein_name": "MICOS complex subunit Mic19", "gene_name": "Chchd3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CAQ8-1", "protein_name": "MICOS complex subunit Mic60", "gene_name": "Immt", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P0DMV9-1", "protein_name": "Heat shock 70 kDa protein 1B", "gene_name": "HSPA1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0DMV8-1", "protein_name": "Heat shock 70 kDa protein 1A", "gene_name": "HSPA1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 11, "end_pos": 11, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "Q9NX63", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q9NX63" }, { "database": "PubMed", "id": "21081504", "url": "https://pubmed.ncbi.nlm.nih.gov/21081504" } ], "site_lbl": "Thr11", "uniprot_canonical_ac": "Q9NX63-1" } ], "mutagenesis": [ { "start_pos": 195, "end_pos": 204, "sequence_org": "ATDRGSESDK", "sequence_mut": "", "comment": "Abolished cleavage at position S3.", "evidence": [ { "database": "UniProtKB", "id": "O60313", "url": "https://www.uniprot.org/uniprotkb/O60313" }, { "database": "PubMed", "id": "33237841", "url": "https://pubmed.ncbi.nlm.nih.gov/33237841" }, { "database": "PubMed", "id": "21081504", "url": "https://pubmed.ncbi.nlm.nih.gov/21081504" } ], "uniprot_canonical_ac": "O60313-1" }, { "start_pos": 200, "end_pos": 204, "sequence_org": "SESDK", "sequence_mut": "", "comment": "Abolished cleavage at position S3.", "evidence": [ { "database": "UniProtKB", "id": "O60313", "url": "https://www.uniprot.org/uniprotkb/O60313" }, { "database": "PubMed", "id": "33237841", "url": "https://pubmed.ncbi.nlm.nih.gov/33237841" }, { "database": "PubMed", "id": "21081504", "url": "https://pubmed.ncbi.nlm.nih.gov/21081504" } ], "uniprot_canonical_ac": "O60313-1" }, { "start_pos": 2, "end_pos": 2, "sequence_org": "G", "sequence_mut": "A", "comment": "Loss of SAMM50-binding. Reduced affinity toward OPA1. No effect on IMMT-binding.", "evidence": [ { "database": "UniProtKB", "id": "Q9CRB9", "url": "https://www.uniprot.org/uniprotkb/Q9CRB9" }, { "database": "PubMed", "id": "21081504", "url": "https://pubmed.ncbi.nlm.nih.gov/21081504" } ], "uniprot_canonical_ac": "Q9CRB9-1" } ], "record_id": "pubmed.21081504", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 10 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Macromolecular organization of ATP synthase and complex I in whole mitochondria.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011", "authors": "Davies KM, Strauss M, Daum B, Kief JH, Osiewacz HD, Rycovska A, Zickermann V, Kuhlbrandt W", "reference": { "type": "PubMed", "id": "21836051", "url": "https://pubmed.ncbi.nlm.nih.gov/21836051" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, mitochondrial", "gene_name": "ATP5MF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36542-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48201-1", "protein_name": "ATP synthase F(0) complex subunit C3, mitochondrial", "gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56385-1", "protein_name": "ATP synthase F(0) complex subunit e, mitochondrial", "gene_name": "ATP5ME", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06055-1", "protein_name": "ATP synthase F(0) complex subunit C2, mitochondrial", "gene_name": "ATP5MC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XKP0-1", "protein_name": "MICOS complex subunit MIC13", "gene_name": "MICOS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXV4-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21836051", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "MINOS1 is a conserved component of mitofilin complexes and required for mitochondrial function and cristae organization.", "journal": "Mol. Biol. Cell", "date": "2012", "authors": "Alkhaja AK, Jans DC, Nikolov M, Vukotic M, Lytovchenko O, Ludewig F, Schliebs W, Riedel D, Urlaub H, Jakobs S, Deckers M", "reference": { "type": "PubMed", "id": "22114354", "url": "https://pubmed.ncbi.nlm.nih.gov/22114354" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96VH5-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MIC10", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, mitochondrial", "gene_name": "ATP5MF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36542-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48201-1", "protein_name": "ATP synthase F(0) complex subunit C3, mitochondrial", "gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56385-1", "protein_name": "ATP synthase F(0) complex subunit e, mitochondrial", "gene_name": "ATP5ME", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06055-1", "protein_name": "ATP synthase F(0) complex subunit C2, mitochondrial", "gene_name": "ATP5MC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XKP0-1", "protein_name": "MICOS complex subunit MIC13", "gene_name": "MICOS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXV4-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP 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"uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22114354", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 34 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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Biol. Chem.", "date": "2012", "authors": "An J, Shi J, He Q, Lui K, Liu Y, Huang Y, Sheikh MS", "reference": { "type": "PubMed", "id": "22228767", "url": "https://pubmed.ncbi.nlm.nih.gov/22228767" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRI5-1", "protein_name": "Disrupted in schizophrenia 1 protein", "gene_name": "DISC1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22228767", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sam50 functions in mitochondrial intermembrane space bridging and biogenesis of respiratory complexes.", "journal": "Mol. Cell. Biol.", "date": "2012", "authors": "Ott C, Ross K, Straub S, Thiede B, Gotz M, Goosmann C, Krischke M, Mueller MJ, Krohne G, Rudel T, Kozjak-Pavlovic V", "reference": { "type": "PubMed", "id": "22252321", "url": "https://pubmed.ncbi.nlm.nih.gov/22252321" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit 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"protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": 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Cell Biol.", "date": "2014", "authors": "Pfanner N, van der Laan M, Amati P, Capaldi RA, Caudy AA, Chacinska A, Darshi M, Deckers M, Hoppins S, Icho T, Jakobs S, Ji J, Kozjak-Pavlovic V, Meisinger C, Odgren PR, Park SK, Rehling P, Reichert AS, Sheikh MS, Taylor SS, Tsuchida N, van der Bliek AM, van der Klei IJ, Weissman JS, Westermann B, Zha J, Neupert W, Nunnari J", "reference": { "type": "PubMed", "id": "24687277", "url": "https://pubmed.ncbi.nlm.nih.gov/24687277" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50087-1", "protein_name": "MICOS subunit MIC26", "gene_name": "MIC26", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P50945-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "MIC27", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P36112-1", "protein_name": "MICOS complex subunit 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The non-glycosylated isoform of MIC26 is a constituent of the mammalian MICOS complex and promotes formation of crista junctions.", "journal": "Biochimica et biophysica acta", "date": "2015", "authors": "Koob S, Barrera M, Anand R, Reichert AS", "reference": { "type": "PubMed", "id": "25764979", "url": "https://pubmed.ncbi.nlm.nih.gov/25764979" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, mitochondrial", "gene_name": "ATP5MF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36542-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48201-1", "protein_name": "ATP synthase F(0) complex subunit C3, mitochondrial", "gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15388-1", "protein_name": "Mitochondrial import receptor subunit TOM20 homolog", "gene_name": "TOMM20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25764979", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 34 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Detailed analysis of the human mitochondrial contact site complex indicate a hierarchy of subunits.", "journal": "PloS one", "date": "2015", "authors": "Ott C, Dorsch E, Fraunholz M, Straub S, Kozjak-Pavlovic V", "reference": { "type": "PubMed", "id": "25781180", "url": "https://pubmed.ncbi.nlm.nih.gov/25781180" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, 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"protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25781180", 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "QIL1 is a novel mitochondrial protein required for MICOS complex stability and cristae morphology.", "journal": "eLife", "date": "2015", "authors": "Guarani V, McNeill EM, Paulo JA, Huttlin EL, Frohlich F, Gygi SP, Van Vactor D, Harper JW", "reference": { "type": "PubMed", "id": "25997101", "url": "https://pubmed.ncbi.nlm.nih.gov/25997101" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, mitochondrial", "gene_name": "ATP5MF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36542-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48201-1", "protein_name": "ATP synthase F(0) complex subunit C3, mitochondrial", "gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56385-1", "protein_name": "ATP synthase F(0) complex subunit e, mitochondrial", "gene_name": "ATP5ME", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06055-1", "protein_name": "ATP synthase F(0) complex subunit C2, mitochondrial", "gene_name": "ATP5MC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XKP0-1", "protein_name": "MICOS complex subunit MIC13", "gene_name": "MICOS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXV4-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9VVH3-1", "protein_name": "MICOS complex subunit MIC13 homolog QIL1", "gene_name": "QIL1", "tax_name": "Fruit fly" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25997101", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 34 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Oxidation Status of Mic19 Regulates MICOS Assembly.", "journal": "Molecular and cellular biology", "date": "2015", "authors": "Sakowska P, Jans DC, Mohanraj K, Riedel D, Jakobs S, Chacinska A", "reference": { "type": "PubMed", "id": "26416881", "url": "https://pubmed.ncbi.nlm.nih.gov/26416881" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56385-1", "protein_name": "ATP synthase F(0) complex subunit e, mitochondrial", "gene_name": "ATP5ME", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06055-1", "protein_name": "ATP synthase F(0) complex subunit C2, mitochondrial", "gene_name": "ATP5MC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XKP0-1", "protein_name": "MICOS complex subunit MIC13", "gene_name": "MICOS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXV4-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26416881", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evolution and structural organization of the mitochondrial contact site (MICOS) complex and the mitochondrial intermembrane space bridging (MIB) complex.", "journal": "Biochimica et biophysica acta", "date": "2016", "authors": "Huynen MA, Muhlmeister M, Gotthardt K, Guerrero-Castillo S, Brandt U", "reference": { "type": "PubMed", "id": "26477565", "url": "https://pubmed.ncbi.nlm.nih.gov/26477565" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, 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subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mitofilin and CHCHD6 physically interact with Sam50 to sustain cristae structure.", "journal": "Scientific reports", "date": "2015", "authors": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mic13 Is Essential for Formation of Crista Junctions in Mammalian Cells.", "journal": "PloS one", "date": "2016", "authors": "Anand R, Strecker V, Urbach J, Wittig I, Reichert AS", "reference": { "type": "PubMed", "id": "27479602", "url": "https://pubmed.ncbi.nlm.nih.gov/27479602" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, mitochondrial", "gene_name": "ATP5MF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36542-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48201-1", "protein_name": "ATP synthase F(0) complex subunit C3, mitochondrial", "gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56385-1", "protein_name": "ATP synthase F(0) complex subunit e, mitochondrial", "gene_name": "ATP5ME", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06055-1", "protein_name": "ATP synthase F(0) complex subunit C2, mitochondrial", "gene_name": "ATP5MC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XKP0-1", "protein_name": "MICOS complex subunit MIC13", "gene_name": "MICOS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXV4-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27479602", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mitochondrial hepato-encephalopathy due to deficiency of QIL1/MIC13 (C19orf70), a MICOS complex subunit.", "journal": "European journal of human genetics : EJHG", "date": "2016", "authors": "Zeharia A, Friedman JR, Tobar A, Saada A, Konen O, Fellig Y, Shaag A, Nunnari J, Elpeleg O", "reference": { "type": "PubMed", "id": "27485409", "url": "https://pubmed.ncbi.nlm.nih.gov/27485409" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, mitochondrial", "gene_name": "ATP5MF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36542-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48201-1", "protein_name": "ATP synthase F(0) complex subunit C3, mitochondrial", "gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56385-1", "protein_name": "ATP synthase F(0) complex subunit e, mitochondrial", "gene_name": "ATP5ME", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06055-1", "protein_name": "ATP synthase F(0) complex subunit C2, mitochondrial", "gene_name": "ATP5MC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XKP0-1", "protein_name": "MICOS complex subunit MIC13", "gene_name": "MICOS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXV4-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13505-1", "protein_name": "Metaxin-1", "gene_name": "MTX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUR5-1", "protein_name": "MICOS complex subunit MIC26", "gene_name": "APOO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48047-1", "protein_name": "ATP synthase peripheral stalk subunit OSCP, mitochondrial", "gene_name": "ATP5PO", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27485409", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "QIL1 mutation causes MICOS disassembly and early onset fatal mitochondrial encephalopathy with liver disease.", "journal": "eLife", "date": "2016", "authors": "Guarani V, Jardel C, Chretien D, Lombes A, Benit P, Labasse C, Lacene E, Bourillon A, Imbard A, Benoist JF, Dorboz I, Gilleron M, Goetzman ES, Gaignard P, Slama A, Elmaleh-Berges M, Romero NB, Rustin P, Ogier de Baulny H, Paulo JA, Harper JW, Schiff M", "reference": { "type": "PubMed", "id": "27623147", "url": "https://pubmed.ncbi.nlm.nih.gov/27623147" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRQ6-1", "protein_name": "MICOS complex subunit MIC25", "gene_name": "CHCHD6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75964-1", "protein_name": "ATP synthase F(0) complex subunit g, mitochondrial", "gene_name": "ATP5MG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24539-1", "protein_name": "ATP synthase peripheral stalk subunit b, mitochondrial", "gene_name": "ATP5PB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99766-1", "protein_name": "ATP synthase subunit s, mitochondrial", "gene_name": "DMAC2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56381-1", "protein_name": "ATP synthase F(1) complex subunit epsilon, mitochondrial", "gene_name": "ATP5F1E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30049-1", "protein_name": "ATP synthase F(1) complex subunit delta, mitochondrial", "gene_name": "ATP5F1D", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75947-1", "protein_name": "ATP synthase peripheral stalk subunit d, mitochondrial", "gene_name": "ATP5PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00846-1", "protein_name": "ATP synthase F(0) complex subunit a", "gene_name": "MT-ATP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03928-1", "protein_name": "ATP synthase F(0) complex subunit 8", "gene_name": "MT-ATP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P18859-1", "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "ATP5PF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56134-1", "protein_name": "ATP synthase F(0) complex subunit f, mitochondrial", "gene_name": "ATP5MF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36542-1", "protein_name": "ATP synthase F(1) complex subunit gamma, mitochondrial", "gene_name": "ATP5F1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48201-1", "protein_name": "ATP synthase F(0) complex subunit C3, mitochondrial", "gene_name": "ATP5MC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56385-1", "protein_name": "ATP synthase F(0) complex subunit e, mitochondrial", "gene_name": "ATP5ME", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06055-1", "protein_name": "ATP synthase F(0) complex subunit C2, mitochondrial", "gene_name": "ATP5MC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XKP0-1", "protein_name": "MICOS complex subunit MIC13", "gene_name": "MICOS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXV4-1", "protein_name": "MICOS complex subunit MIC27", "gene_name": "APOOL", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75431-1", "protein_name": "Metaxin-2", "gene_name": "MTX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y512-1", "protein_name": "Sorting and assembly machinery component 50 homolog", "gene_name": "SAMM50", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVH1-1", "protein_name": "DnaJ homolog subfamily C member 11", "gene_name": "DNAJC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06576-1", "protein_name": "ATP synthase F(1) complex subunit beta, mitochondrial", "gene_name": "ATP5F1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25705-1", "protein_name": "ATP synthase F(1) complex subunit alpha, mitochondrial", "gene_name": "ATP5F1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56378-1", "protein_name": "ATP synthase F(0) complex subunit j, mitochondrial", "gene_name": "ATP5MJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05496-1", "protein_name": "ATP synthase F(0) complex subunit C1, mitochondrial", "gene_name": "ATP5MC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17152-1", "protein_name": "Transmembrane protein 11, mitochondrial", "gene_name": "TMEM11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IX5-1", "protein_name": "ATP synthase F(0) complex subunit k, mitochondrial", "gene_name": "ATP5MK", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "OPA1 and MICOS Regulate mitochondrial crista dynamics and formation.", "journal": "Cell death & disease", "date": "2020-10-31", "authors": "Hu Chao, Shu Li, Huang Xiaoshuai, Yu Jianglong, Li Liuju, Gong Longlong, Yang Meigui, Wu Zhida, Gao Zhi, Zhao Yungang, Chen Liangyi, Song Zhiyin", "reference": { "type": "PubMed", "id": "33130824", "url": "https://pubmed.ncbi.nlm.nih.gov/33130824" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NX63-1", "protein_name": "MICOS complex subunit MIC19", "gene_name": "CHCHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16891-1", "protein_name": "MICOS complex subunit MIC60", "gene_name": "IMMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5TGZ0-1", "protein_name": "MICOS complex subunit MIC10", "gene_name": "MICOS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60313-1", "protein_name": "Dynamin-like GTPase OPA1, mitochondrial", "gene_name": "OPA1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NX63", "url": "https://www.uniprot.org/uniprotkb/Q9NX63" } ], 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Heterozygous HESX1 mutations associated with isolated congenital pituitary hypoplasia and septo-optic dysplasia.", "journal": "Human molecular genetics", "date": "2001", "authors": "Thomas PQ, Dattani MT, Brickman JM, McNay D, Warne G, Zacharin M, Cameron F, Hurst J, Woods K, Dunger D, Stanhope R, Forrest S, Robinson IC, Beddington RS", "reference": { "type": "PubMed", "id": "11136712", "url": "https://pubmed.ncbi.nlm.nih.gov/11136712" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UBX0-1", "protein_name": "Homeobox expressed in ES cells 1", "gene_name": "HESX1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UBX0", "url": "https://www.uniprot.org/uniprotkb/Q9UBX0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11136712", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The unique amino-terminal region of the PDE4D5 cAMP phosphodiesterase isoform confers preferential interaction with beta-arrestins.", "journal": "J. Biol. Chem.", "date": "2003", "authors": "Bolger Graeme B, McCahill Angela, Huston Elaine, Cheung York-Fong, McSorley Theresa, Baillie George S, Houslay Miles D", "reference": { "type": "PubMed", "id": "14500724", "url": "https://pubmed.ncbi.nlm.nih.gov/14500724" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q08499-1", "protein_name": "3',5'-cyclic-AMP phosphodiesterase 4D", "gene_name": "PDE4D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29067-1", "protein_name": "Beta-arrestin-2", "gene_name": "Arrb2", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q08499", "url": "https://www.uniprot.org/uniprotkb/Q08499" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14500724", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]