[ { "title": "Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2018-04-03", "authors": "Salanenka Yuliya, Verstraeten Inge, L\u00f6fke Christian, Tabata Kaori, Naramoto Satoshi, Glanc Matou\u0161, Friml Ji\u0159\u00ed", "reference": { "type": "PubMed", "id": "29463731", "url": "https://pubmed.ncbi.nlm.nih.gov/29463731" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P57742-1", "protein_name": "Prefoldin subunit 5", "gene_name": "PFD5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q2HIK4-1", "protein_name": "Prefoldin subunit 6", "gene_name": "PFD6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P57742", "url": "https://www.uniprot.org/uniprotkb/P57742" } ], "common_name": 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freezing tolerance.", "journal": "Plant physiology", "date": "2008-09", "authors": "Chen Qin-Fang, Xiao Shi, Chye Mee-Len", "reference": { "type": "PubMed", "id": "18621979", "url": "https://pubmed.ncbi.nlm.nih.gov/18621979" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P57752-1", "protein_name": "Acyl-CoA-binding domain-containing protein 6", "gene_name": "ACBP6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P57752", "url": "https://www.uniprot.org/uniprotkb/P57752" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18621979", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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in Arabidopsis.", "journal": "Planta", "date": "2002-06", "authors": "Okada Kazunori, Kawaide Hiroshi, Kuzuyama Tomohisa, Seto Haruo, Curtis Ian S, Kamiya Yuji", "reference": { "type": "PubMed", "id": "12029484", "url": "https://pubmed.ncbi.nlm.nih.gov/12029484" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P69834-1", "protein_name": "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic", "gene_name": "ISPD", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P69834", "url": "https://www.uniprot.org/uniprotkb/P69834" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12029484", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The crystal structure of a plant 2C-methyl-D-erythritol 4-phosphate cytidylyltransferase exhibits a distinct quaternary structure compared to bacterial homologues and a possible role in feedback regulation for cytidine monophosphate.", "journal": "FEBS J.", "date": "2006", "authors": "Gabrielsen Mads, Kaiser Johannes, Rohdich Felix, Eisenreich Wolfgang, Laupitz Ralf, Bacher Adelbert, Bond Charles S, Hunter William N", "reference": { "type": "PubMed", "id": "16478479", "url": "https://pubmed.ncbi.nlm.nih.gov/16478479" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P69834-1", "protein_name": "2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic", "gene_name": "ISPD", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P69834", "url": "https://www.uniprot.org/uniprotkb/P69834" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16478479", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Biol.", "date": "2006", "authors": "Perry Andrew J, Hulett Joanne M, Liki\u0107 Vladimir A, Lithgow Trevor, Gooley Paul R", "reference": { "type": "PubMed", "id": "16461275", "url": "https://pubmed.ncbi.nlm.nih.gov/16461275" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P82874-1", "protein_name": "Mitochondrial import receptor subunit TOM20-3", "gene_name": "TOM20-3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P82874", "url": "https://www.uniprot.org/uniprotkb/P82874" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16461275", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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U.S.A.", "date": "1997", "authors": "Liang F, Cunningham K W, Harper J F, Sze H", "reference": { "type": "PubMed", "id": "9238019", "url": "https://pubmed.ncbi.nlm.nih.gov/9238019" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P92939-1", "protein_name": "Calcium-transporting ATPase 1, endoplasmic reticulum-type", "gene_name": "ECA1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P92939", "url": "https://www.uniprot.org/uniprotkb/P92939" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9238019", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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U.S.A.", "date": "1998", "authors": "Bick J A, Aslund F, Chen Y, Leustek T", "reference": { "type": "PubMed", "id": "9653199", "url": "https://pubmed.ncbi.nlm.nih.gov/9653199" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P92979-1", "protein_name": "5'-adenylylsulfate reductase 1, chloroplastic", "gene_name": "APR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P92979", "url": "https://www.uniprot.org/uniprotkb/P92979" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9653199", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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Genet.", "date": "1996", "authors": "Peng Z, Lu Q, Verma D P", "reference": { "type": "PubMed", "id": "9003320", "url": "https://pubmed.ncbi.nlm.nih.gov/9003320" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P92983-1", "protein_name": "Proline dehydrogenase 1, mitochondrial", "gene_name": "POX1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "P92983", "url": "https://www.uniprot.org/uniprotkb/P92983" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9003320", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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J.", "reference": { "type": "PubMed", "id": "12231822", "url": "https://pubmed.ncbi.nlm.nih.gov/12231822" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q04836-1", "protein_name": "31 kDa ribonucleoprotein, chloroplastic", "gene_name": "CP31A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q04836", "url": "https://www.uniprot.org/uniprotkb/Q04836" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12231822", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RNP-T, a ribonucleoprotein from Arabidopsis thaliana, contains two RNP-80 motifs and a novel acidic repeat arranged in an alpha-helix conformation.", "journal": "Plant Mol. 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "An Arabidopsis chloroplast RNA-binding protein gene encodes multiple mRNAs with different 5' ends.", "journal": "Plant Physiol.", "date": "1994", "authors": "Cheng S H, Cline K, DeLisle A J", "reference": { "type": "PubMed", "id": "7972518", "url": "https://pubmed.ncbi.nlm.nih.gov/7972518" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q04836-1", "protein_name": "31 kDa ribonucleoprotein, chloroplastic", "gene_name": "CP31A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q04836", "url": "https://www.uniprot.org/uniprotkb/Q04836" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7972518", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": 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J.", "date": "1993", "authors": "Dumas R, Curien G, DeRose R T, Douce R", "reference": { "type": "PubMed", "id": "8379936", "url": "https://pubmed.ncbi.nlm.nih.gov/8379936" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q05758-1", "protein_name": "Ketol-acid reductoisomerase, chloroplastic", "gene_name": "F14P22.200", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q05758", "url": "https://www.uniprot.org/uniprotkb/Q05758" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8379936", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nucleotide sequence and characterization of a cDNA encoding the acetohydroxy acid isomeroreductase from Arabidopsis thaliana.", "journal": "Plant Mol. 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K.", "reference": { "type": "PubMed", "id": "12232208", "url": "https://pubmed.ncbi.nlm.nih.gov/12232208" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q06327-1", "protein_name": "Linoleate 9S-lipoxygenase 1", "gene_name": "LOX1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q06327", "url": "https://www.uniprot.org/uniprotkb/Q06327" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12232208", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": 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