[ { "title": "Stress induces tRNA cleavage by angiogenin in mammalian cells.", "journal": "FEBS letters", "date": "2009", "authors": "Fu H, Feng J, Liu Q, Sun F, Tie Y, Zhu J, Xing R, Sun Z, Zheng X", "reference": { "type": "PubMed", "id": "19114040", "url": "https://pubmed.ncbi.nlm.nih.gov/19114040" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UPY3-1", "protein_name": "Endoribonuclease Dicer", "gene_name": "DICER1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21570-1", "protein_name": "Angiogenin", "gene_name": "Ang", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P03950-1", "protein_name": "Angiogenin", "gene_name": "ANG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQ52-1", "protein_name": "Zinc phosphodiesterase ELAC protein 2", "gene_name": "ELAC2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UPY3", "url": "https://www.uniprot.org/uniprotkb/Q9UPY3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19114040", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A TARBP2 mutation in human cancer impairs microRNA processing and DICER1 function.", "journal": "Nat. Genet.", "date": "2009", "authors": "Melo Sonia A, Ropero Santiago, Moutinho Catia, Aaltonen Lauri A, Yamamoto Hiroyuki, Calin George A, Rossi Simona, Fernandez Agustin F, Carneiro Fatima, Oliveira Carla, Ferreira Bibiana, Liu Chang-Gong, Villanueva Alberto, Capella Gabriel, Schwartz Simo, Shiekhattar Ramin, Esteller Manel", "reference": { "type": "PubMed", "id": "19219043", "url": "https://pubmed.ncbi.nlm.nih.gov/19219043" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UPY3-1", "protein_name": "Endoribonuclease Dicer", "gene_name": "DICER1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15633-1", "protein_name": "RISC-loading complex subunit TARBP2", "gene_name": "TARBP2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UPY3", "url": "https://www.uniprot.org/uniprotkb/Q9UPY3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens 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"type": "PubMed", "id": "19332886", "url": "https://pubmed.ncbi.nlm.nih.gov/19332886" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UPY3-1", "protein_name": "Endoribonuclease Dicer", "gene_name": "DICER1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03950-1", "protein_name": "Angiogenin", "gene_name": "ANG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQ52-1", "protein_name": "Zinc phosphodiesterase ELAC protein 2", "gene_name": "ELAC2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UPY3", "url": "https://www.uniprot.org/uniprotkb/Q9UPY3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19332886", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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fragments (tRFs).", "journal": "Genes & development", "date": "2009", "authors": "Lee YS, Shibata Y, Malhotra A, Dutta A", "reference": { "type": "PubMed", "id": "19933153", "url": "https://pubmed.ncbi.nlm.nih.gov/19933153" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UPY3-1", "protein_name": "Endoribonuclease Dicer", "gene_name": "DICER1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03950-1", "protein_name": "Angiogenin", "gene_name": "ANG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQ52-1", "protein_name": "Zinc phosphodiesterase ELAC protein 2", "gene_name": "ELAC2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UPY3", "url": "https://www.uniprot.org/uniprotkb/Q9UPY3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19933153", "abstract": "", "glycosylation": [], 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"Selitsky SR, Baran-Gale J, Honda M, Yamane D, Masaki T, Fannin EE, Guerra B, Shirasaki T, Shimakami T, Kaneko S, Lanford RE, Lemon SM, Sethupathy P", "reference": { "type": "PubMed", "id": "25567797", "url": "https://pubmed.ncbi.nlm.nih.gov/25567797" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UPY3-1", "protein_name": "Endoribonuclease Dicer", "gene_name": "DICER1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P03950-1", "protein_name": "Angiogenin", "gene_name": "ANG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQ52-1", "protein_name": "Zinc phosphodiesterase ELAC protein 2", "gene_name": "ELAC2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UPY3", "url": "https://www.uniprot.org/uniprotkb/Q9UPY3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25567797", "abstract": "", 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U.S.A.", "date": "2010", "authors": "James V, Zhang Y, Foxler DE, de Moor CH, Kong YW, Webb TM, Self TJ, Feng Y, Lagos D, Chu CY, Rana TM, Morley SJ, Longmore GD, Bushell M, Sharp TV", "reference": { "type": "PubMed", "id": "20616046", "url": "https://pubmed.ncbi.nlm.nih.gov/20616046" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IU60-1", "protein_name": "m7GpppN-mRNA hydrolase", "gene_name": "DCP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UGP4-1", "protein_name": "LIM domain-containing protein 1", "gene_name": "LIMD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06730-1", "protein_name": "Eukaryotic translation initiation factor 4E", "gene_name": "EIF4E", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26196-1", "protein_name": "Probable ATP-dependent RNA helicase DDX6", "gene_name": "DDX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IF1-1", "protein_name": "LIM domain-containing protein ajuba", "gene_name": "AJUBA", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NIX2-1", "protein_name": "Wilms tumor protein 1-interacting protein", "gene_name": "WTIP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UL18", "url": "https://www.uniprot.org/uniprotkb/Q9UL18" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20616046", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "HIV-1 replication and APOBEC3 antiviral activity are not regulated by P bodies.", "journal": "J. Virol.", "date": "2012", "authors": "Phalora Prabhjeet K, Sherer Nathan M, Wolinsky Steven M, Swanson Chad M, Malim Michael H", "reference": { "type": "PubMed", "id": "22915799", "url": "https://pubmed.ncbi.nlm.nih.gov/22915799" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UH17-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3B", "gene_name": "APOBEC3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NTF7-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3H", "gene_name": "APOBEC3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUX4-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3F", "gene_name": "APOBEC3F", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AK3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3D", "gene_name": "APOBEC3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26196-1", "protein_name": "Probable ATP-dependent RNA helicase DDX6", "gene_name": "DDX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31941-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3A", "gene_name": "APOBEC3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRW3-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3C", "gene_name": "APOBEC3C", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UL18", "url": "https://www.uniprot.org/uniprotkb/Q9UL18" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22915799", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The making of a slicer: activation of human Argonaute-1.", "journal": "Cell reports", "date": "2013", "authors": "Faehnle CR, Elkayam E, Haase AD, Hannon GJ, 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], "uniprot_canonical_ac": "Q9UKV8-1" }, { "start_pos": 676, "end_pos": 676, "sequence_org": "F", "sequence_mut": "M", "comment": "Impairs RNA cleavage.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" }, { "database": "PubMed", "id": "23746446", "url": "https://pubmed.ncbi.nlm.nih.gov/23746446" } ], "uniprot_canonical_ac": "Q9UKV8-1" }, { "start_pos": 676, "end_pos": 676, "sequence_org": "F", "sequence_mut": "R", "comment": "Impairs RNA cleavage.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" }, { "database": "PubMed", "id": "23746446", "url": "https://pubmed.ncbi.nlm.nih.gov/23746446" } ], "uniprot_canonical_ac": "Q9UKV8-1" }, { "start_pos": 676, "end_pos": 676, "sequence_org": "F", "sequence_mut": "V", "comment": "Abrogates RNA cleavage.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" }, { "database": 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"sequence_mut": "R", "comment": "Abrogates RNA cleavage.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" }, { "database": "PubMed", "id": "15800637", "url": "https://pubmed.ncbi.nlm.nih.gov/15800637" }, { "database": "PubMed", "id": "23746446", "url": "https://pubmed.ncbi.nlm.nih.gov/23746446" } ], "uniprot_canonical_ac": "Q9UKV8-1" } ], "record_id": "pubmed.23746446", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Eukaryote-specific insertion elements control human ARGONAUTE slicer activity.", "journal": "Cell reports", "date": "2013", "authors": "Nakanishi K, Ascano M, Gogakos T, Ishibe-Murakami S, Serganov AA, Briskin D, Morozov P, Tuschl T, Patel DJ", "reference": { "type": "PubMed", "id": "23809764", "url": "https://pubmed.ncbi.nlm.nih.gov/23809764" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UL18", "url": "https://www.uniprot.org/uniprotkb/Q9UL18" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 670, "end_pos": 670, "sequence_org": "P", "sequence_mut": "S", "comment": "Confers modest RNA cleavage activity; when associated with Q-675 and H-805.", "evidence": [ { "database": "UniProtKB", "id": "Q9UL18", "url": "https://www.uniprot.org/uniprotkb/Q9UL18" }, { "database": "PubMed", "id": "23809764", "url": "https://pubmed.ncbi.nlm.nih.gov/23809764" } ], "uniprot_canonical_ac": "Q9UL18-1" }, { "start_pos": 675, "end_pos": 675, "sequence_org": "P", "sequence_mut": "Q", "comment": "Does not confer enzyme activity by itself. Confers low RNA cleavage activity; when associated with H-805. Confers modest RNA cleavage activity; when associated with S-670 and H-805.", "evidence": [ { "database": "UniProtKB", "id": "Q9UL18", "url": "https://www.uniprot.org/uniprotkb/Q9UL18" }, { "database": "PubMed", "id": "23809764", "url": "https://pubmed.ncbi.nlm.nih.gov/23809764" } ], "uniprot_canonical_ac": "Q9UL18-1" }, { "start_pos": 805, "end_pos": 805, "sequence_org": "R", "sequence_mut": "H", "comment": "Does not confer enzyme activity by itself. 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Further evidence of a causal association between AGO1, a critical regulator of microRNA formation, and intellectual disability/autism spectrum disorder.", "journal": "European journal of medical genetics", "date": "2019", "authors": "Sakaguchi A, Yamashita Y, Ishii T, Uehara T, Kosaki K, Takahashi T, Takenouchi T", "reference": { "type": "PubMed", "id": "30213762", "url": "https://pubmed.ncbi.nlm.nih.gov/30213762" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UL18", "url": "https://www.uniprot.org/uniprotkb/Q9UL18" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.30213762", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Stolerman Elliot, Washington Camerun, Louie Ray, Lanpher Brendan C, Kemppainen Jennifer L, Innes Micheil, Kooy Frank, Meuwissen Marije, Goldenberg Alice, Lecoquierre Francois, Vera Gabriella, Diderich Karin E M, Sheidley Beth, El Achkar Christelle Moufawad, Park Meredith, Hamdan Fadi F, Michaud Jacques L, Lewis Ann J, Zweier Christiane, Reis Andr\u00e9, Wagner Matias, Weigand Heike, Journel Hubert, Keren Boris, Passemard Sandrine, Mignot Cyril, van Gassen Koen, Brilstra Eva H, Itzikowitz Gina, O'Heir Emily, Allen Jake, Donald Kirsten A, Korf Bruce Richard, Skelton Tammi, Thompson Michelle, Robin Nathaniel H, Rudy Natasha L, Dobyns William B, Foss Kimberly, Zarate Yuri Alexander, Bosanko Katherine A, Alembik Yves, Durand Benjamin, Tran Mau-Them Frederic, Ranza Emmanuelle, Blanc Xavier, Antonarakis Stylianos E, McWalter Kirsty, Torti Erin, Millan Francisca, Dameron Amy, Tokita Mari, Zimmermann Michael T, Klee Eric W, Piton Amelie, Gerard Benedicte", "reference": { "type": "PubMed", "id": 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"LINC01116 modulates EMT process via binding with AGO1 mRNA in oesophageal squamous cell carcinoma.", "journal": "Biochimica et biophysica acta. Molecular cell research", "date": "2023-03-27", "authors": "Fang Xin, Ren Li-Hua, Shrestha Sachin Mulmi, Ji Qinghua, Xu Zeyan, Wang Dan, Ding Qitao, Liang Xiao, Shi Rui-Hua", "reference": { "type": "PubMed", "id": "36990227", "url": "https://pubmed.ncbi.nlm.nih.gov/36990227" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UL18", "url": "https://www.uniprot.org/uniprotkb/Q9UL18" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36990227", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and characterization of a novel human gene containing 4 ankyrin repeat domains.", "journal": "Cell. Mol. Biol. Lett.", "date": "2005", "authors": "Li J, Ji C, Zheng H, Fei X, Zheng M, Dai J, Gu S, Xie Y, Mao Y", "reference": { "type": "PubMed", "id": "15809689", "url": "https://pubmed.ncbi.nlm.nih.gov/15809689" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z713-1", "protein_name": "Ankyrin repeat domain-containing protein 37", "gene_name": "ANKRD37", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2M1-1", "protein_name": "LRP2-binding protein", "gene_name": "LRP2BP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z713", "url": "https://www.uniprot.org/uniprotkb/Q7Z713" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15809689", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The autocrine motility factor receptor gene encodes a novel type of seven transmembrane protein.", "journal": "FEBS letters", "date": "1999", "authors": "Shimizu K, Tani M, Watanabe H, Nagamachi Y, Niinaka Y, Shiroishi T, Ohwada S, Raz A, Yokota J", "reference": { "type": "PubMed", "id": "10456327", "url": "https://pubmed.ncbi.nlm.nih.gov/10456327" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV5-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9R049-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "Amfr", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV5", "url": "https://www.uniprot.org/uniprotkb/Q9UKV5" } ], "common_name": 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"Purification of human tumor cell autocrine motility factor and molecular cloning of its receptor.", "journal": "J. Biol. Chem.", "date": "1991", "authors": "Watanabe H, Carmi P, Hogan V, Raz T, Silletti S, Nabi I R, Raz A", "reference": { "type": "PubMed", "id": "1649192", "url": "https://pubmed.ncbi.nlm.nih.gov/1649192" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV5-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV5", "url": "https://www.uniprot.org/uniprotkb/Q9UKV5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1649192", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P54727-1", "protein_name": "Lysine-specific demethylase RAD23B", "gene_name": "RAD23B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62191-1", "protein_name": "26S proteasome regulatory subunit 4", "gene_name": "PSMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04323-1", "protein_name": "UBX domain-containing protein 1", "gene_name": "UBXN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUN8-1", "protein_name": "Derlin-1", "gene_name": "DERL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IV0-1", "protein_name": "Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase", "gene_name": "NGLY1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55072-1", "protein_name": "Transitional endoplasmic reticulum ATPase", "gene_name": "VCP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14697-1", "protein_name": "Neutral 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"Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV5", "url": "https://www.uniprot.org/uniprotkb/Q9UKV5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18524852", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 16 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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Biol. Chem.", "date": "2011", "authors": "H\u00e4nzelmann Petra, Schindelin Hermann", "reference": { "type": "PubMed", "id": "21914798", "url": "https://pubmed.ncbi.nlm.nih.gov/21914798" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV5-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55072-1", "protein_name": "Transitional endoplasmic reticulum ATPase", "gene_name": "VCP", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV5", "url": "https://www.uniprot.org/uniprotkb/Q9UKV5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21914798", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RING finger palmitoylation of the endoplasmic reticulum Gp78 E3 ubiquitin ligase.", "journal": "FEBS letters", "date": "2012", "authors": "Fairbank M, Huang K, El-Husseini A, Nabi IR", "reference": { "type": "PubMed", "id": "22728137", "url": "https://pubmed.ncbi.nlm.nih.gov/22728137" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV5-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6R6-1", "protein_name": "Palmitoyltransferase ZDHHC6", "gene_name": "ZDHHC6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV5", "url": "https://www.uniprot.org/uniprotkb/Q9UKV5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 341, "end_pos": 344, "sequence_org": "CAIC", "sequence_mut": "AAIA", "comment": "Decreased palmitoylation.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKV5", "url": "https://www.uniprot.org/uniprotkb/Q9UKV5" }, { "database": "PubMed", "id": "22728137", "url": "https://pubmed.ncbi.nlm.nih.gov/22728137" } ], "uniprot_canonical_ac": "Q9UKV5-1" }, { "start_pos": 356, "end_pos": 356, "sequence_org": "C", "sequence_mut": "A", "comment": "Decreased palmitoylation. 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"date": "2014", "authors": "Liu Y, Soetandyo N, Lee JG, Liu L, Xu Y, Clemons WM Jr, Ye Y", "reference": { "type": "PubMed", "id": "24424410", "url": "https://pubmed.ncbi.nlm.nih.gov/24424410" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV5-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46379-1", "protein_name": "Large proline-rich protein BAG6", "gene_name": "BAG6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11441-1", "protein_name": "Ubiquitin-like protein 4A", "gene_name": "UBL4A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92995-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 13", "gene_name": "USP13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV5", "url": "https://www.uniprot.org/uniprotkb/Q9UKV5" } ], "common_name": "Human", "glygen_name": "Human", 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Cell", "date": "2018", "authors": "Bersuker K, Peterson CWH, To M, Sahl SJ, Savikhin V, Grossman EA, Nomura DK, Olzmann JA", "reference": { "type": "PubMed", "id": "29275994", "url": "https://pubmed.ncbi.nlm.nih.gov/29275994" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV5-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUN8-1", "protein_name": "Derlin-1", "gene_name": "DERL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD1-1", "protein_name": "UPF0729 protein C18orf32", "gene_name": "C18orf32", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV5", "url": "https://www.uniprot.org/uniprotkb/Q9UKV5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29275994", "abstract": "", "glycosylation": [], 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Schwaede Abigail, Kuntz Nancy, Palculict Timothy Blake, Abbas Safdar, Umair Muhammad, AlMuhaizea Mohammed, Colak Dilek, AlQudairy Hanan, Alsagob Maysoon, Pereira Catarina, Trunzo Roberta, Karageorgou Vasiliki, Bertoli-Avella Aida M, Bauer Peter, Bouman Arjan, Hoefsloot Lies H, van Ham Tjakko J, Issa Mahmoud, Zaki Maha S, Gleeson Joseph G, Willemsen Rob, Kaya Namik, Arold Stefan T, Maroofian Reza, Sanderson Leslie E, Barakat Tahsin Stefan", "reference": { "type": "PubMed", "id": "37119330", "url": "https://pubmed.ncbi.nlm.nih.gov/37119330" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV5-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "AMFR", "tax_name": "Human" }, { "uniprot_canonical_ac": "A0A8M9PPK1-1", "protein_name": "Squalene synthase", "gene_name": "fdft1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "F1QB30-1", "protein_name": "E3 ubiquitin-protein ligase AMFR", "gene_name": "amfra", "tax_name": "Zebrafish" } 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