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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "POZ domain transcription factor, FBI-1, represses transcription of ADH5/FDH by interacting with the zinc finger and interfering with DNA binding activity of Sp1.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Lee DK, Suh D, Edenberg HJ, Hur MW", "reference": { "type": "PubMed", "id": "12004059", "url": "https://pubmed.ncbi.nlm.nih.gov/12004059" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95365-1", "protein_name": "Zinc finger and BTB domain-containing protein 7A", "gene_name": "ZBTB7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08047-1", "protein_name": "Transcription factor Sp1", "gene_name": "SP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12004059", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Flexible DNA binding of the BTB/POZ-domain protein FBI-1.", "journal": "The Journal of biological chemistry", "date": "2003", "authors": "Pessler F, Hernandez N", "reference": { "type": "PubMed", "id": "12750370", "url": "https://pubmed.ncbi.nlm.nih.gov/12750370" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95365-1", "protein_name": "Zinc finger and BTB domain-containing protein 7A", "gene_name": "ZBTB7A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12750370", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure of the POZ domain of human LRF, a master regulator of oncogenesis.", "journal": "Biochem. Biophys. Res. Commun.", "date": "2006", "authors": "Schubot Florian D, Tropea Joseph E, Waugh David S", "reference": { "type": "PubMed", "id": "17052694", "url": "https://pubmed.ncbi.nlm.nih.gov/17052694" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95365-1", "protein_name": "Zinc finger and BTB domain-containing protein 7A", "gene_name": "ZBTB7A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17052694", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structure of the BTB domain from the LRF/ZBTB7 transcriptional regulator.", "journal": "Protein Sci.", "date": "2007", "authors": "Stogios Peter J, Chen Lu, Priv\u00e9 Gilbert G", "reference": { "type": "PubMed", "id": "17189472", "url": "https://pubmed.ncbi.nlm.nih.gov/17189472" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95365-1", "protein_name": "Zinc finger and BTB domain-containing protein 7A", "gene_name": "ZBTB7A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17189472", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of pokemon 1 activity by sumoylation.", "journal": "Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology", "date": "2007", "authors": "Roh HE, Lee MN, Jeon BN, Choi WI, Kim YJ, Yu MY, Hur MW", "reference": { "type": "PubMed", "id": "17595526", "url": "https://pubmed.ncbi.nlm.nih.gov/17595526" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95365-1", "protein_name": "Zinc finger and BTB domain-containing protein 7A", "gene_name": "ZBTB7A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 354, "end_pos": 354, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation with SUMO1. No effect on promoter binding.", "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" }, { "database": "PubMed", "id": "17595526", "url": "https://pubmed.ncbi.nlm.nih.gov/17595526" } ], "uniprot_canonical_ac": "O95365-1" }, { "start_pos": 371, "end_pos": 371, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation with SUMO1. No effect on promoter binding.", "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" }, { "database": "PubMed", "id": "17595526", "url": "https://pubmed.ncbi.nlm.nih.gov/17595526" } ], "uniprot_canonical_ac": "O95365-1" }, { "start_pos": 379, "end_pos": 379, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation with SUMO1. Decreased transcription repression activity. No effect on promoter binding.", "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" }, { "database": "PubMed", "id": "17595526", "url": "https://pubmed.ncbi.nlm.nih.gov/17595526" } ], "uniprot_canonical_ac": "O95365-1" }, { "start_pos": 383, "end_pos": 383, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation with SUMO1. No effect on promoter binding.", "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" }, { "database": "PubMed", "id": "17595526", "url": "https://pubmed.ncbi.nlm.nih.gov/17595526" } ], "uniprot_canonical_ac": "O95365-1" }, { "start_pos": 396, "end_pos": 396, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation with SUMO1. Decreased transcription repression activity. No effect on promoter binding.", "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" }, { "database": "PubMed", "id": "17595526", "url": "https://pubmed.ncbi.nlm.nih.gov/17595526" } ], "uniprot_canonical_ac": "O95365-1" }, { "start_pos": 486, "end_pos": 486, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation with SUMO1. No effect on promoter binding. No effect on nuclear localization.", "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" }, { "database": "PubMed", "id": "17595526", "url": "https://pubmed.ncbi.nlm.nih.gov/17595526" } ], "uniprot_canonical_ac": "O95365-1" }, { "start_pos": 487, "end_pos": 487, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation with SUMO1. No effect on promoter binding. No effect on nuclear localization.", "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" }, { "database": "PubMed", "id": "17595526", "url": "https://pubmed.ncbi.nlm.nih.gov/17595526" } ], "uniprot_canonical_ac": "O95365-1" }, { "start_pos": 536, "end_pos": 536, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation with SUMO1. Decreased transcription repression activity. No effect on promoter binding.", "evidence": [ { "database": "UniProtKB", "id": "O95365", "url": "https://www.uniprot.org/uniprotkb/O95365" }, { "database": "PubMed", "id": "17595526", "url": "https://pubmed.ncbi.nlm.nih.gov/17595526" } ], "uniprot_canonical_ac": "O95365-1" }, { "start_pos": 539, "end_pos": 539, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on sumoylation with SUMO1. Decreased transcription repression activity. 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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Characterization of the human CD8 alpha gene.", "journal": "J. Immunol.", "date": "1989", "authors": "Norment A M, Lonberg N, Lacy E, Littman D R", "reference": { "type": "PubMed", "id": "2496167", "url": "https://pubmed.ncbi.nlm.nih.gov/2496167" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01732-1", "protein_name": "T-cell surface glycoprotein CD8 alpha chain", "gene_name": "CD8A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01732", "url": "https://www.uniprot.org/uniprotkb/P01732" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2496167", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A secreted form of the human lymphocyte cell surface molecule CD8 arises from alternative splicing.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "1989", "authors": "Giblin P, Ledbetter J A, Kavathas P", "reference": { "type": "PubMed", "id": "2536941", "url": "https://pubmed.ncbi.nlm.nih.gov/2536941" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P01732-1", "protein_name": "T-cell surface glycoprotein CD8 alpha chain", "gene_name": "CD8A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P01732", "url": "https://www.uniprot.org/uniprotkb/P01732" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2536941", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"Association between CEP72 genotype and persistent neuropathy in survivors of childhood acute lymphoblastic leukemia.", "journal": "Leukemia", "date": "2022", "authors": "Goodenough CG, Diouf B, Yang W, Sapkota Y, Finch ER, Lu L, Partin RE, Wogksch MD, Hudson MM, Robison LL, Wang Z, Jeha S, Evans WE, Ness KK", "reference": { "type": "PubMed", "id": "34980876", "url": "https://pubmed.ncbi.nlm.nih.gov/34980876" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P209-1", "protein_name": "Centrosomal protein of 72 kDa", "gene_name": "CEP72", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P209", "url": "https://www.uniprot.org/uniprotkb/Q9P209" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34980876", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": 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a zinc metalloenzyme.", "journal": "Archives of biochemistry and biophysics", "date": "1998", "authors": "Millian NS, Garrow TA", "reference": { "type": "PubMed", "id": "9681996", "url": "https://pubmed.ncbi.nlm.nih.gov/9681996" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93088-1", "protein_name": "Betaine--homocysteine S-methyltransferase 1", "gene_name": "BHMT", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q93088", "url": "https://www.uniprot.org/uniprotkb/Q93088" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9681996", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural basis of DNA bridging by barrier-to-autointegration factor.", "journal": "Biochemistry", "date": "2000", "authors": "Umland T C, Wei S Q, Craigie R, Davies D R", "reference": { "type": "PubMed", "id": "10924106", "url": "https://pubmed.ncbi.nlm.nih.gov/10924106" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75531-1", "protein_name": "Barrier-to-autointegration factor", "gene_name": "BANF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", 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[] } ] }, { "title": "Both the structure and DNA binding function of the barrier-to-autointegration factor contribute to reconstitution of HIV type 1 integration in vitro.", "journal": "The Journal of biological chemistry", "date": "2000", "authors": "Harris D, Engelman A", "reference": { "type": "PubMed", "id": "11005805", "url": "https://pubmed.ncbi.nlm.nih.gov/11005805" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75531-1", "protein_name": "Barrier-to-autointegration factor", "gene_name": "BANF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75531", "url": "https://www.uniprot.org/uniprotkb/O75531" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 14, "end_pos": 14, "sequence_org": "P", "sequence_mut": "A", "comment": "No effect on LEMD3/MAN1 and enhances histone H1/H3 binding.", 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histone H1/H3 and LEMD3/MAN1 binding. Fails to promote HIV-1 genome integration.", "evidence": [ { "database": "UniProtKB", "id": "O75531", "url": "https://www.uniprot.org/uniprotkb/O75531" }, { "database": "PubMed", "id": "15681850", "url": "https://pubmed.ncbi.nlm.nih.gov/15681850" }, { "database": "PubMed", "id": "16203725", "url": "https://pubmed.ncbi.nlm.nih.gov/16203725" }, { "database": "PubMed", "id": "11005805", "url": "https://pubmed.ncbi.nlm.nih.gov/11005805" } ], "uniprot_canonical_ac": "O75531-1" }, { "start_pos": 26, "end_pos": 26, "sequence_org": "I", "sequence_mut": "K", "comment": "Fails to promote HIV-1 genome integration.", "evidence": [ { "database": "UniProtKB", "id": "O75531", "url": "https://www.uniprot.org/uniprotkb/O75531" }, { "database": "PubMed", "id": "15681850", "url": "https://pubmed.ncbi.nlm.nih.gov/15681850" }, { "database": "PubMed", "id": "16203725", "url": "https://pubmed.ncbi.nlm.nih.gov/16203725" }, { "database": "PubMed", "id": "11005805", "url": "https://pubmed.ncbi.nlm.nih.gov/11005805" } ], "uniprot_canonical_ac": "O75531-1" }, { "start_pos": 41, "end_pos": 41, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on histone H1/H3 and LEMD3/MAN1 binding.", "evidence": [ { "database": "UniProtKB", "id": "O75531", "url": "https://www.uniprot.org/uniprotkb/O75531" }, { "database": "PubMed", "id": "15681850", "url": "https://pubmed.ncbi.nlm.nih.gov/15681850" }, { "database": "PubMed", "id": "16203725", "url": "https://pubmed.ncbi.nlm.nih.gov/16203725" }, { "database": "PubMed", "id": "11005805", "url": "https://pubmed.ncbi.nlm.nih.gov/11005805" } ], "uniprot_canonical_ac": "O75531-1" }, { "start_pos": 41, "end_pos": 41, "sequence_org": "K", "sequence_mut": "E", "comment": "Reduces histone H1/H3 binding.", "evidence": [ { "database": "UniProtKB", "id": "O75531", "url": "https://www.uniprot.org/uniprotkb/O75531" }, { "database": "PubMed", "id": "15681850", "url": "https://pubmed.ncbi.nlm.nih.gov/15681850" }, { "database": "PubMed", "id": "16203725", "url": "https://pubmed.ncbi.nlm.nih.gov/16203725" }, { "database": "PubMed", "id": "11005805", "url": "https://pubmed.ncbi.nlm.nih.gov/11005805" } ], "uniprot_canonical_ac": "O75531-1" }, { "start_pos": 50, "end_pos": 50, "sequence_org": "L", "sequence_mut": "A", "comment": "Reduces LEMD3/MAN1 binding. No effect on Histone H1/H3 binding.", "evidence": [ { "database": "UniProtKB", "id": "O75531", "url": "https://www.uniprot.org/uniprotkb/O75531" }, { "database": "PubMed", "id": "15681850", "url": "https://pubmed.ncbi.nlm.nih.gov/15681850" }, { "database": "PubMed", "id": "16203725", "url": "https://pubmed.ncbi.nlm.nih.gov/16203725" }, { "database": "PubMed", "id": "11005805", "url": "https://pubmed.ncbi.nlm.nih.gov/11005805" } ], "uniprot_canonical_ac": "O75531-1" }, { "start_pos": 50, "end_pos": 50, "sequence_org": "L", "sequence_mut": "K", "comment": "Fails to promote HIV-1 genome integration.", "evidence": [ { "database": "UniProtKB", "id": "O75531", "url": "https://www.uniprot.org/uniprotkb/O75531" }, { "database": "PubMed", "id": "15681850", "url": "https://pubmed.ncbi.nlm.nih.gov/15681850" }, { "database": "PubMed", "id": "16203725", "url": "https://pubmed.ncbi.nlm.nih.gov/16203725" }, { "database": "PubMed", "id": "11005805", "url": "https://pubmed.ncbi.nlm.nih.gov/11005805" } ], "uniprot_canonical_ac": "O75531-1" }, { "start_pos": 53, "end_pos": 53, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on LEMD3/MAN1 binding. 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Virol.", "date": "2003", "authors": "Lin Chou-Wen, Engelman Alan", "reference": { "type": "PubMed", "id": "12663813", "url": "https://pubmed.ncbi.nlm.nih.gov/12663813" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75531-1", "protein_name": "Barrier-to-autointegration factor", "gene_name": "BANF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75531", "url": "https://www.uniprot.org/uniprotkb/O75531" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12663813", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Barrier-to-autointegration factor BAF binds p55 Gag and matrix and is a host component of human immunodeficiency virus type 1 virions.", "journal": "J. Virol.", "date": "2003", "authors": "Mansharamani Malini, Graham David R M, Monie Daphne, Lee Kenneth K, Hildreth James E K, Siliciano Robert F, Wilson Katherine L", "reference": { "type": "PubMed", "id": "14645565", "url": "https://pubmed.ncbi.nlm.nih.gov/14645565" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75531-1", "protein_name": "Barrier-to-autointegration factor", "gene_name": "BANF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75531", "url": "https://www.uniprot.org/uniprotkb/O75531" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14645565", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "BAF: roles in chromatin, nuclear structure and retrovirus integration.", "journal": "Trends Cell Biol.", "date": "2004", "authors": "Segura-Totten Miriam, Wilson Katherine L", "reference": { "type": "PubMed", "id": "15130582", "url": "https://pubmed.ncbi.nlm.nih.gov/15130582" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75531-1", "protein_name": "Barrier-to-autointegration factor", "gene_name": "BANF1", "tax_name": "Human" } ], 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional disruption of the moloney murine leukemia virus preintegration complex by vaccinia-related kinases.", 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