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"Kim Tae-Wuk, Hwang Jung-Yun, Kim Young-Soo, Joo Se-Hwan, Chang Soo Chul, Lee June Seung, Takatsuto Suguru, Kim Seong-Ki", "reference": { "type": "PubMed", "id": "16024588", "url": "https://pubmed.ncbi.nlm.nih.gov/16024588" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q940V4-1", "protein_name": "Cytochrome P450 85A2", "gene_name": "CYP85A2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FMA5-1", "protein_name": "Cytochrome P450 85A1", "gene_name": "CYP85A1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q940V4", "url": "https://www.uniprot.org/uniprotkb/Q940V4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16024588", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"Q941D6", "url": "https://www.uniprot.org/uniprotkb/Q941D6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.29061669", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Rice histone deacetylase 10 and Arabidopsis histone deacetylase 14 genes encode N-acetylserotonin deacetylase, which catalyzes conversion of N-acetylserotonin into serotonin, a reverse reaction for melatonin biosynthesis in plants.", "journal": "Journal of pineal research", "date": "2018-03", "authors": "Lee Kyungjin, Lee Hyoung Yool, Back Kyoungwhan", "reference": { "type": "PubMed", "id": "29247559", "url": "https://pubmed.ncbi.nlm.nih.gov/29247559" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q941D6-1", "protein_name": "Histone deacetylase 14, chloroplastic", "gene_name": "HDA14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q941D6", "url": "https://www.uniprot.org/uniprotkb/Q941D6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.29247559", "abstract": "", 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"sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Requirement of calcium binding, myristoylation, and protein-protein interaction for the copine BON1 function in Arabidopsis.", "journal": "J. Biol. Chem.", "date": "2010", "authors": "Li Yongqing, Gou Mingyue, Sun Qi, Hua Jian", "reference": { "type": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q941L2-1", "protein_name": "BON1-associated protein 1", "gene_name": "BAP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q941L3-1", "protein_name": "Protein BONZAI 1", "gene_name": "BON1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q941L2", "url": "https://www.uniprot.org/uniprotkb/Q941L2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 122, "end_pos": 122, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect; when associated with A-124. No effect; when associated with A-269. Loss of function; when associated with A-63; A-69 and A-124. Loss of function, but no effect on targeting; when associated with A-63; A-69; A-124; A-209; A-215 and A-269.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 124, "end_pos": 124, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect; when associated with A-122. Loss of function; when associated with A-63; A-69 and A-122. Loss of function, but no effect on targeting; when associated with A-63; A-69; A-122; A-209; A-215 and A-269.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 209, "end_pos": 209, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect; when associated with A-215. Loss of function; when associated with A-215 and A-269. Loss of function, but no effect on targeting; when associated with A-63; A-69; A-122; A-124; A-215 and A-269.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 215, "end_pos": 215, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect; when associated with A-209. Loss of function; when associated with A-209 and A-269. Loss of function, but no effect on targeting; when associated with A-63; A-69; A-122; A-124; A-209 and A-269.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 269, "end_pos": 269, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect. No effect; when associated with A-122. Loss of function; when associated with A-209 and A-215. Loss of function, but no effect on targeting; when associated with A-63; A-69; A-122; A-124; A-209 and A-215.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 2, "end_pos": 2, "sequence_org": "G", "sequence_mut": "A", "comment": "Loss of function and altered targeting.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 350, "end_pos": 350, "sequence_org": "A", "sequence_mut": "V", "comment": "Loss of function and reduced interaction with BAP1; when associated with A-353.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 353, "end_pos": 353, "sequence_org": "G", "sequence_mut": "A", "comment": "Loss of function and reduced interaction with BAP1; when associated with V-350.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 391, "end_pos": 391, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 391, "end_pos": 391, "sequence_org": "K", "sequence_mut": "NAAIRS", "comment": "Loss of function and loss of interaction with BAP1.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 63, "end_pos": 63, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect. No effect; when associated with A-69. Loss of function; when associated with A-69; A-122 and A-124. Loss of function, but no effect on targeting; when associated with A-69; A-122; A-124; A-209; A-215 and A-269.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" }, { "start_pos": 69, "end_pos": 69, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect; when associated with A-63. Loss of function; when associated with A-63; A-122 and A-124. Loss of function, but no effect on targeting; when associated with A-63; A-122; A-124; A-209; A-215 and A-269.", "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" }, { "database": "PubMed", "id": "20634289", "url": "https://pubmed.ncbi.nlm.nih.gov/20634289" } ], "uniprot_canonical_ac": "Q941L3-1" } ], "record_id": "pubmed.20634289", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A humidity-sensitive Arabidopsis copine mutant exhibits precocious cell death and increased disease resistance.", "journal": "Plant Cell", "date": "2001", "authors": "Jambunathan N, Siani J M, McNellis T W", "reference": { "type": "PubMed", "id": "11595798", "url": "https://pubmed.ncbi.nlm.nih.gov/11595798" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q941L3-1", "protein_name": "Protein BONZAI 1", "gene_name": "BON1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11595798", "abstract": "", "glycosylation": [], 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of Arabidopsis COPINE 1 gene expression in response to pathogens and abiotic stimuli.", "journal": "Plant Physiol.", "date": "2003", "authors": "Jambunathan Niranjani, McNellis Timothy W", "reference": { "type": "PubMed", "id": "12857819", "url": "https://pubmed.ncbi.nlm.nih.gov/12857819" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q941L3-1", "protein_name": "Protein BONZAI 1", "gene_name": "BON1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12857819", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transgenic expression of the von Willebrand A domain of the BONZAI 1/COPINE 1 protein triggers a lesion-mimic phenotype in Arabidopsis.", "journal": "Planta", "date": "2005", "authors": "Liu Jianxin, Jambunathan Niranjani, McNellis Timothy W", "reference": { "type": "PubMed", "id": "15843967", "url": "https://pubmed.ncbi.nlm.nih.gov/15843967" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q941L3-1", "protein_name": "Protein BONZAI 1", "gene_name": "BON1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Evidence that the BONZAI1/COPINE1 protein is a calcium- and pathogen-responsive defense suppressor.", "journal": "Plant molecular biology", "date": "2009-01", "authors": "Lee Tzuu-Fen, McNellis Timothy W", "reference": { "type": "PubMed", "id": "18855102", "url": "https://pubmed.ncbi.nlm.nih.gov/18855102" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q941L3-1", "protein_name": "Protein BONZAI 1", "gene_name": "BON1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q941L3", "url": "https://www.uniprot.org/uniprotkb/Q941L3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18855102", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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F", "date": "2005", "authors": "Bitto Eduard, Bingman Craig A, Allard Simon T M, Wesenberg Gary E, Phillips George N", "reference": { "type": "PubMed", "id": "16511115", "url": "https://pubmed.ncbi.nlm.nih.gov/16511115" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q949P3-1", "protein_name": "Damage-control phosphatase At2g17340", "gene_name": "F5J6.10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q949P3", "url": "https://www.uniprot.org/uniprotkb/Q949P3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16511115", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q949Q5", "url": "https://www.uniprot.org/uniprotkb/Q949Q5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11801243", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"2012-12", "authors": "Li Baohai, Li Qing, Xiong Liming, Kronzucker Herbert J, Kr\u00e4mer Ute, Shi Weiming", "reference": { "type": "PubMed", "id": "23064408", "url": "https://pubmed.ncbi.nlm.nih.gov/23064408" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q949Y5-1", "protein_name": "Probable zinc metalloprotease EGY1, chloroplastic", "gene_name": "EGY1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q949Y5", "url": "https://www.uniprot.org/uniprotkb/Q949Y5" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.23064408", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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J.", "date": "2007", "authors": "Arnaud Nicolas, Ravet Karl, Borlotti Andrea, Touraine Brigitte, Boucherez Jossia, Fizames C\u00e9cile, Briat Jean-Fran\u00e7ois, Cellier Fran\u00e7oise, Gaymard Fr\u00e9d\u00e9ric", "reference": { "type": "PubMed", "id": "17437406", "url": "https://pubmed.ncbi.nlm.nih.gov/17437406" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q94A28-1", "protein_name": "Aconitate hydratase 2, mitochondrial", "gene_name": "ACO2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q42560-1", "protein_name": "Aconitate hydratase 1", "gene_name": "ACO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIB9-1", "protein_name": "Aconitate hydratase 3, mitochondrial", "gene_name": "ACO3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94A28", "url": "https://www.uniprot.org/uniprotkb/Q94A28" } ], "common_name": "Mouse-ear 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predictor.", "journal": "Plant Physiol.", "date": "2014", "authors": "Taylor Nicolas L, Fenske Ricarda, Castleden Ian, Tomaz Tiago, Nelson Clark J, Millar A Harvey", "reference": { "type": "PubMed", "id": "24296071", "url": "https://pubmed.ncbi.nlm.nih.gov/24296071" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q94A28-1", "protein_name": "Aconitate hydratase 2, mitochondrial", "gene_name": "ACO2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIB9-1", "protein_name": "Aconitate hydratase 3, mitochondrial", "gene_name": "ACO3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94A28", "url": "https://www.uniprot.org/uniprotkb/Q94A28" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.24296071", "abstract": "", "glycosylation": [], "mutagenesis": [], 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "mRNA biogenesis-related helicase eIF4AIII from Arabidopsis thaliana is an important factor for abiotic stress adaptation.", "journal": "Plant cell reports", "date": "2016-05", "authors": "Pascuan Cecilia, Frare Romina, Alleva Karina, Ayub Nicol\u00e1s Daniel, Soto Gabriela", "reference": { "type": "PubMed", "id": "26883227", "url": "https://pubmed.ncbi.nlm.nih.gov/26883227" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q94A52-1", "protein_name": "Eukaryotic initiation factor 4A-III homolog", "gene_name": "EIF4A3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94A52", "url": "https://www.uniprot.org/uniprotkb/Q94A52" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.26883227", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The RNA Polymerase II C-Terminal Domain Phosphatase-Like Protein FIERY2/CPL1 Interacts with eIF4AIII and Is Essential for Nonsense-Mediated mRNA Decay in Arabidopsis.", "journal": "The Plant cell", "date": "2016-03", "authors": "Cui Peng, Chen Tao, Qin Tao, Ding Feng, Wang Zhenyu, Chen Hao, Xiong Liming", "reference": { "type": "PubMed", "id": "26887918", "url": "https://pubmed.ncbi.nlm.nih.gov/26887918" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q94A52-1", "protein_name": "Eukaryotic initiation factor 4A-III homolog", "gene_name": "EIF4A3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FVW4-1", "protein_name": "Regulator of nonsense transcripts UPF3", "gene_name": "UPF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q5YDB6-1", "protein_name": "RNA polymerase II C-terminal domain phosphatase-like 1", "gene_name": "CPL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94A52", "url": "https://www.uniprot.org/uniprotkb/Q94A52" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 100, "end_pos": 100, "sequence_org": "S", "sequence_mut": "D", "comment": "Increases cytoplasmic localization; when associated with D-101.", "evidence": [ { "database": "UniProtKB", "id": "Q94A52", "url": "https://www.uniprot.org/uniprotkb/Q94A52" }, { "database": "PubMed", "id": "26887918", "url": "https://pubmed.ncbi.nlm.nih.gov/26887918" } ], "uniprot_canonical_ac": "Q94A52-1" }, { "start_pos": 101, "end_pos": 101, "sequence_org": "S", "sequence_mut": "D", "comment": "Increases cytoplasmic localization; when associated with D-100.", "evidence": [ { "database": "UniProtKB", "id": "Q94A52", "url": "https://www.uniprot.org/uniprotkb/Q94A52" }, { "database": "PubMed", "id": "26887918", "url": "https://pubmed.ncbi.nlm.nih.gov/26887918" } ], "uniprot_canonical_ac": "Q94A52-1" } ], "phosphorylation": [ { "start_pos": 100, "end_pos": 100, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q94A52", "url": "https://www.uniprot.org/uniprotkb/Q94A52" }, { "database": "PubMed", "id": "26887918", "url": "https://pubmed.ncbi.nlm.nih.gov/26887918" }, { "database": "iPTMnet", "id": "Q94A52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q94A52" } ], "site_lbl": "Ser100", "uniprot_canonical_ac": "Q94A52-1" }, { "start_pos": 101, "end_pos": 101, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "Q94A52", "url": "https://www.uniprot.org/uniprotkb/Q94A52" }, { "database": "PubMed", "id": "26887918", "url": "https://pubmed.ncbi.nlm.nih.gov/26887918" }, { "database": "iPTMnet", "id": "Q94A52", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q94A52" } ], "site_lbl": "Ser101", "uniprot_canonical_ac": "Q94A52-1" } ], "record_id": "pubmed.26887918", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 2 }, { "field": "total_sites", "count": 2 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Alternative splicing of Myb-related genes MYR1 and MYR2 may modulate activities through changes in dimerization, localization, or protein folding.", "journal": "Plant Signal. Behav.", "date": "2013", "authors": "Zhao Chengsong, Beers Eric", "reference": { "type": "PubMed", "id": "24309816", "url": "https://pubmed.ncbi.nlm.nih.gov/24309816" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q94A57-1", "protein_name": "Protein PHR1-LIKE 2", "gene_name": "PHL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK47-1", "protein_name": "Myb-related protein 1", "gene_name": "MYR1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAJ7-1", "protein_name": "Protein PHR1-LIKE 3", "gene_name": "PHL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SQQ9-1", "protein_name": "Myb-related protein 2", "gene_name": "MYR2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94A57", "url": "https://www.uniprot.org/uniprotkb/Q94A57" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 70, "end_pos": 70, "sequence_org": "K", "sequence_mut": "A", "comment": "Partly directed to one or more nuclear spots. Partly located to extra-nuclear aggregates; when associated with A-74 or A-78. Complete loss of nuclear localization; when associated with A-74 and A-78.", "evidence": [ { "database": "UniProtKB", "id": "Q9SQQ9", "url": "https://www.uniprot.org/uniprotkb/Q9SQQ9" }, { "database": "PubMed", "id": "24309816", "url": "https://pubmed.ncbi.nlm.nih.gov/24309816" } ], "uniprot_canonical_ac": "Q9SQQ9-1" }, { "start_pos": 70, "end_pos": 70, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on nuclear localization. No effect nuclear localization; when associated with R-74 and R-78.", "evidence": [ { "database": "UniProtKB", "id": "Q9SQQ9", "url": "https://www.uniprot.org/uniprotkb/Q9SQQ9" }, { "database": "PubMed", "id": "24309816", "url": "https://pubmed.ncbi.nlm.nih.gov/24309816" } ], "uniprot_canonical_ac": "Q9SQQ9-1" }, { "start_pos": 72, "end_pos": 72, "sequence_org": "T", "sequence_mut": "A", "comment": "In isoform 1 and isoform 3; no effect on nuclear localization.", "evidence": [ { "database": "UniProtKB", "id": "Q9SQQ9", "url": "https://www.uniprot.org/uniprotkb/Q9SQQ9" }, { "database": "PubMed", "id": "24309816", "url": "https://pubmed.ncbi.nlm.nih.gov/24309816" } ], "uniprot_canonical_ac": "Q9SQQ9-1" }, { "start_pos": 72, "end_pos": 72, "sequence_org": "T", "sequence_mut": "E", "comment": "In isoform 1; partial localization to one or more nuclear spots. In isoform 3; increased localization to nuclear spots.", "evidence": [ { "database": "UniProtKB", "id": "Q9SQQ9", "url": "https://www.uniprot.org/uniprotkb/Q9SQQ9" }, { "database": "PubMed", "id": "24309816", "url": "https://pubmed.ncbi.nlm.nih.gov/24309816" } ], "uniprot_canonical_ac": "Q9SQQ9-1" }, { "start_pos": 74, "end_pos": 74, "sequence_org": "K", "sequence_mut": "A", "comment": "Partly directed to one or more nuclear spots. Partly located to extra-nuclear aggregates; when associated with A-70 or A-78. Complete loss of nuclear localization; when associated with A-74 and A-78.", "evidence": [ { "database": "UniProtKB", "id": "Q9SQQ9", "url": "https://www.uniprot.org/uniprotkb/Q9SQQ9" }, { "database": "PubMed", "id": "24309816", "url": "https://pubmed.ncbi.nlm.nih.gov/24309816" } ], "uniprot_canonical_ac": "Q9SQQ9-1" }, { "start_pos": 74, "end_pos": 74, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on nuclear localization. No effect nuclear localization; when associated with R-70 and R-78.", "evidence": [ { "database": "UniProtKB", "id": "Q9SQQ9", "url": "https://www.uniprot.org/uniprotkb/Q9SQQ9" }, { "database": "PubMed", "id": "24309816", "url": "https://pubmed.ncbi.nlm.nih.gov/24309816" } ], "uniprot_canonical_ac": "Q9SQQ9-1" }, { "start_pos": 78, "end_pos": 78, "sequence_org": "K", "sequence_mut": "A", "comment": "Partly located to extra-nuclear aggregates; when associated with A-70 or A-74. Complete loss of nuclear localization; when associated with A-70 and A-74.", "evidence": [ { "database": "UniProtKB", "id": "Q9SQQ9", "url": "https://www.uniprot.org/uniprotkb/Q9SQQ9" }, { "database": "PubMed", "id": "24309816", "url": "https://pubmed.ncbi.nlm.nih.gov/24309816" } ], "uniprot_canonical_ac": "Q9SQQ9-1" }, { "start_pos": 78, "end_pos": 78, "sequence_org": "K", "sequence_mut": "R", "comment": "No effect on nuclear localization. No effect nuclear localization; when associated with R-70 and R-74.", "evidence": [ { "database": "UniProtKB", "id": "Q9SQQ9", "url": "https://www.uniprot.org/uniprotkb/Q9SQQ9" }, { "database": "PubMed", "id": "24309816", "url": "https://pubmed.ncbi.nlm.nih.gov/24309816" } ], "uniprot_canonical_ac": "Q9SQQ9-1" } ], "record_id": "pubmed.24309816", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SIS8, a putative mitogen-activated protein kinase kinase kinase, regulates sugar-resistant seedling development in Arabidopsis.", "journal": "Plant J.", "date": "2014", "authors": "Huang Yadong, Li Chun Yao, Qi Yiping, Park Sungjin, Gibson Susan I", "reference": { "type": "PubMed", "id": "24320620", "url": "https://pubmed.ncbi.nlm.nih.gov/24320620" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q94A84-1", "protein_name": "UDP-glycosyltransferase 72E1", "gene_name": "UGT72E1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9U5-1", "protein_name": "Probable serine/threonine-protein kinase SIS8", "gene_name": "SIS8", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q94A84", "url": "https://www.uniprot.org/uniprotkb/Q94A84" } ], "common_name": 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partitioning, sugar signaling, and seed yield in Arabidopsis.", "journal": "Plant physiology", "date": "2010-10", "authors": "Wingenter Karina, Schulz Alexander, Wormit Alexandra, Wic Stefan, Trentmann Oliver, Hoermiller Imke I, Heyer Arnd G, Marten Irene, Hedrich Rainer, Neuhaus H Ekkehard", "reference": { "type": "PubMed", "id": "20709831", "url": "https://pubmed.ncbi.nlm.nih.gov/20709831" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96290-1", "protein_name": "Monosaccharide-sensing protein 1", "gene_name": "MSSP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q96290", "url": "https://www.uniprot.org/uniprotkb/Q96290" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20709831", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Exp. Bot.", "date": "2006", "authors": "Chen Jin-Gui, Ullah Hemayet, Temple Brenda, Liang Jiansheng, Guo Jianjun, Alonso Jos\u00e9 M, Ecker Joseph R, Jones Alan M", "reference": { "type": "PubMed", "id": "16829549", "url": "https://pubmed.ncbi.nlm.nih.gov/16829549" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C4Z6-1", "protein_name": "Small ribosomal subunit protein RACK1y", "gene_name": "RACK1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O24456-1", "protein_name": "Small ribosomal subunit protein RACK1z", "gene_name": "RACK1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV28-1", "protein_name": "Small ribosomal subunit protein RACK1x", "gene_name": "RACK1C", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C4Z6", "url": "https://www.uniprot.org/uniprotkb/Q9C4Z6" } ], "common_name": "Mouse-ear cress", "glygen_name": 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"authors": "Guo Jianjun, Chen Jin-Gui", "reference": { "type": "PubMed", "id": "18947417", "url": "https://pubmed.ncbi.nlm.nih.gov/18947417" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C4Z6-1", "protein_name": "Small ribosomal subunit protein RACK1y", "gene_name": "RACK1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O24456-1", "protein_name": "Small ribosomal subunit protein RACK1z", "gene_name": "RACK1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LV28-1", "protein_name": "Small ribosomal subunit protein RACK1x", "gene_name": "RACK1C", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C4Z6", "url": "https://www.uniprot.org/uniprotkb/Q9C4Z6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18947417", "abstract": "", 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Biol. Chem.", "date": "2001", "authors": "Yahalom A, Kim T H, Winter E, Karniol B, von Arnim A G, Chamovitz D A", "reference": { "type": "PubMed", "id": "11029466", "url": "https://pubmed.ncbi.nlm.nih.gov/11029466" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C5Z3-1", "protein_name": "Eukaryotic translation initiation factor 3 subunit E", "gene_name": "TIF3E1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94JU3-1", "protein_name": "COP9 signalosome complex subunit 7", "gene_name": "CSN7; FUS5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C5Z3", "url": "https://www.uniprot.org/uniprotkb/Q9C5Z3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11029466", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and characterization of a proteolysis-resistant fragment containing the PCI domain in the Arabidopsis thaliana INT6/eIF3e translation factor.", "journal": "Cell Biochem. Biophys.", "date": "2006", "authors": "Murai Marcelo J, Carneiro Fl\u00e1via R G, Gozzo Fabio C, Ierardi Daniela F, Pertinhez Thelma A, Zanchin Nilson I T", "reference": { "type": "PubMed", "id": "16679540", "url": "https://pubmed.ncbi.nlm.nih.gov/16679540" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C5Z3-1", "protein_name": "Eukaryotic translation initiation factor 3 subunit E", "gene_name": "TIF3E1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C5Z3", "url": "https://www.uniprot.org/uniprotkb/Q9C5Z3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16679540", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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"url": "https://www.uniprot.org/uniprotkb/Q9C639" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15563470", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Lhca5 interaction with plant photosystem I.", "journal": "FEBS Lett.", "date": "2006", "authors": "Lucinski Robert, Schmid Volkmar H R, Jansson Stefan, Klimmek Frank", "reference": { "type": "PubMed", "id": "17107674", "url": "https://pubmed.ncbi.nlm.nih.gov/17107674" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C639-1", "protein_name": "Photosystem I chlorophyll a/b-binding protein 5, chloroplastic", "gene_name": "LHCA5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SY97-1", "protein_name": "Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic", "gene_name": "LHCA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYW8-1", "protein_name": "Photosystem I chlorophyll a/b-binding protein 2, chloroplastic", "gene_name": "LHCA2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C639", "url": "https://www.uniprot.org/uniprotkb/Q9C639" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17107674", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { 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"sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The role of Lhca complexes in the supramolecular organization of higher plant photosystem I.", "journal": "J. Biol. Chem.", "date": "2009", "authors": "Wientjes Emilie, Oostergetel Gert T, Jansson Stefan, Boekema Egbert J, Croce Roberta", "reference": { "type": "PubMed", "id": "19139095", "url": "https://pubmed.ncbi.nlm.nih.gov/19139095" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C639-1", "protein_name": "Photosystem I chlorophyll a/b-binding protein 5, chloroplastic", "gene_name": "LHCA5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SY97-1", "protein_name": "Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic", "gene_name": "LHCA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYW8-1", "protein_name": "Photosystem I chlorophyll a/b-binding protein 2, chloroplastic", "gene_name": "LHCA2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C639", "url": "https://www.uniprot.org/uniprotkb/Q9C639" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19139095", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The role of the individual Lhcas in photosystem I excitation energy trapping.", "journal": "Biophysical journal", "date": "2011-08-03", "authors": "Wientjes Emilie, van Stokkum Ivo H M, van Amerongen Herbert, Croce Roberta", "reference": { "type": "PubMed", "id": "21806943", "url": "https://pubmed.ncbi.nlm.nih.gov/21806943" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C639-1", "protein_name": "Photosystem I chlorophyll a/b-binding protein 5, chloroplastic", "gene_name": "LHCA5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P27521-1", "protein_name": "Chlorophyll a-b binding protein 4, chloroplastic", "gene_name": "LHCA4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q01667-1", "protein_name": "Chlorophyll a-b binding protein 6, chloroplastic", "gene_name": "LHCA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SY97-1", "protein_name": "Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic", "gene_name": "LHCA3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SYW8-1", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis LTPG is a glycosylphosphatidylinositol-anchored lipid transfer protein required for export of lipids to the plant surface.", "journal": "The Plant cell", "date": "2009-04", "authors": "Debono Allan, Yeats Trevor H, Rose Jocelyn K C, Bird David, Jetter Reinhard, Kunst Ljerka, Samuels Lacey", "reference": { "type": "PubMed", "id": "19366900", "url": "https://pubmed.ncbi.nlm.nih.gov/19366900" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C7F7-1", "protein_name": "Non-specific lipid transfer protein GPI-anchored 1", "gene_name": "LTPG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C7F7", "url": "https://www.uniprot.org/uniprotkb/Q9C7F7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], 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thaliana.", "journal": "Plant & cell physiology", "date": "2012-08", "authors": "Kim Hyojin, Lee Saet Buyl, Kim Hae Jin, Min Myung Ki, Hwang Inhwan, Suh Mi Chung", "reference": { "type": "PubMed", "id": "22891199", "url": "https://pubmed.ncbi.nlm.nih.gov/22891199" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C7F7-1", "protein_name": "Non-specific lipid transfer protein GPI-anchored 1", "gene_name": "LTPG1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZH5-1", "protein_name": "Non-specific lipid transfer protein GPI-anchored 2", "gene_name": "LTPG2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9C7F7", "url": "https://www.uniprot.org/uniprotkb/Q9C7F7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22891199", "abstract": "", 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