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Biol.", "date": "2013", "authors": "Cheng Shijun, Liu Renyi, Gallie Daniel R", "reference": { "type": "PubMed", "id": "24041411", "url": "https://pubmed.ncbi.nlm.nih.gov/24041411" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8W4Q4-1", "protein_name": "MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3", "gene_name": "MRF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80548-1", "protein_name": "MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 2", "gene_name": "MRF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BR1-1", "protein_name": "MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1", "gene_name": "MRF1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9STL9-1", "protein_name": "MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 4", "gene_name": "MRF4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", 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"Proceedings of the National Academy of Sciences of the United States of America", "date": "2010-02-16", "authors": "Krebs Melanie, Beyhl Diana, G\u00f6rlich Esther, Al-Rasheid Khaled A S, Marten Irene, Stierhof York-Dieter, Hedrich Rainer, Schumacher Karin", "reference": { "type": "PubMed", "id": "20133698", "url": "https://pubmed.ncbi.nlm.nih.gov/20133698" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8W4S4-1", "protein_name": "V-type proton ATPase subunit a3", "gene_name": "VHA-a3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SJT7-1", "protein_name": "V-type proton ATPase subunit a2", "gene_name": "VHA-a2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8W4S4", "url": "https://www.uniprot.org/uniprotkb/Q8W4S4" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], 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Biol. Chem.", "date": "2002", "authors": "Bailey Shaun, Thompson Elinor, Nixon Peter J, Horton Peter, Mullineaux Conrad W, Robinson Colin, Mann Nicholas H", "reference": { "type": "PubMed", "id": "11717304", "url": "https://pubmed.ncbi.nlm.nih.gov/11717304" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8W585-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 8, chloroplastic", "gene_name": "FTSH8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q1PDW5-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 6, chloroplastic", "gene_name": "FTSH6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80860-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 2, chloroplastic", "gene_name": "FTSH2; VAR2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8W585", "url": "https://www.uniprot.org/uniprotkb/Q8W585" } ], 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Two types of FtsH protease subunits are required for chloroplast biogenesis and Photosystem II repair in Arabidopsis.", "journal": "Plant Cell", "date": "2005", "authors": "Zaltsman Adi, Ori Naomi, Adam Zach", "reference": { "type": "PubMed", "id": "16126834", "url": "https://pubmed.ncbi.nlm.nih.gov/16126834" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8W585-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 8, chloroplastic", "gene_name": "FTSH8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FH02-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 5, chloroplastic", "gene_name": "FTSH5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39102-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 1, chloroplastic", "gene_name": "FTSH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80860-1", "protein_name": "ATP-dependent zinc metalloprotease FTSH 2, chloroplastic", "gene_name": "FTSH2; VAR2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", 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Stanislas Thomas, Vain Thomas, Claverol St\u00e9phane, Gustavsson Anna, Lin Deshu, Grebe Markus, Bhalerao Rishikesh P", "reference": { "type": "PubMed", "id": "30770391", "url": "https://pubmed.ncbi.nlm.nih.gov/30770391" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93VH1-1", "protein_name": "Protein YIP4b", "gene_name": "YIP4B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64614-1", "protein_name": "Protein YIP4a", "gene_name": "YIP4A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38912-1", "protein_name": "Rac-like GTP-binding protein ARAC3", "gene_name": "ARAC3; RAC3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38919-1", "protein_name": "Rac-like GTP-binding protein ARAC4", "gene_name": "ARAC4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38937-1", "protein_name": "Rac-like GTP-binding protein ARAC5", "gene_name": "ARAC5", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": 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J.", "date": "2009", "authors": "Gregory Allison L, Hurley Brenden A, Tran Hue T, Valentine Alexander J, She Yi-Min, Knowles Vicki L, Plaxton William C", "reference": { "type": "PubMed", "id": "19228119", "url": "https://pubmed.ncbi.nlm.nih.gov/19228119" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93VK0-1", "protein_name": "Phosphoenolpyruvate carboxylase kinase 2", "gene_name": "PPCK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SPK4-1", "protein_name": "Phosphoenolpyruvate carboxylase kinase 1", "gene_name": "PPCK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9MAH0-1", "protein_name": "Phosphoenolpyruvate carboxylase 1", "gene_name": "PPC1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93VK0", "url": "https://www.uniprot.org/uniprotkb/Q93VK0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", 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U.S.A.", "date": "2008", "authors": "Matsumoto-Kitano Miho, Kusumoto Takami, Tarkowski Petr, Kinoshita-Tsujimura Kaori, V\u00e1clav\u00edkov\u00e1 Katerina, Miyawaki Kaori, Kakimoto Tatsuo", "reference": { "type": "PubMed", "id": "19074290", "url": "https://pubmed.ncbi.nlm.nih.gov/19074290" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93WC9-1", "protein_name": "Adenylate isopentenyltransferase 3, chloroplastic", "gene_name": "IPT3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93WC9", "url": "https://www.uniprot.org/uniprotkb/Q93WC9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19074290", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Implications for its role in sulfur and selenium metabolism.", "journal": "Plant Physiol.", "date": "2002", "authors": "Pilon-Smits Elizabeth A H, Garifullina Gulnara F, Abdel-Ghany Salah, Kato Shin-Ichiro, Mihara Hisaaki, Hale Kerry L, Burkhead Jason L, Esaki Nobuyoshi, Kurihara Tatsuo, Pilon Marinus", "reference": { "type": "PubMed", "id": "12427997", "url": "https://pubmed.ncbi.nlm.nih.gov/12427997" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93WX6-1", "protein_name": "Cysteine desulfurase 1, chloroplastic", "gene_name": "NFS2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93WX6", "url": "https://www.uniprot.org/uniprotkb/Q93WX6" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12427997", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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"authors": "Manara Anna, DalCorso Giovanni, Guzzo Flavia, Furini Antonella", "reference": { "type": "PubMed", "id": "25809944", "url": "https://pubmed.ncbi.nlm.nih.gov/25809944" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93Y08-1", "protein_name": "Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic", "gene_name": "ABC1K8", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "B9DGY1-1", "protein_name": "Protein ACTIVITY OF BC1 COMPLEX KINASE 7, chloroplastic", "gene_name": "ABC1K7; SIA1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93Y08", "url": "https://www.uniprot.org/uniprotkb/Q93Y08" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25809944", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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perspectives.", "journal": "Plant Physiol.", "date": "2007", "authors": "Raffaele Sylvain, Mongrand S\u00e9bastien, Gamas Pascal, Niebel Andreas, Ott Thomas", "reference": { "type": "PubMed", "id": "17984200", "url": "https://pubmed.ncbi.nlm.nih.gov/17984200" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93YN8-1", "protein_name": "Remorin 4.1", "gene_name": "REM4.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFA5-1", "protein_name": "Remorin 1.4", "gene_name": "MRO11.21; REM1.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93758-1", "protein_name": "Remorin 4.2", "gene_name": "REM4.2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93YN8", "url": "https://www.uniprot.org/uniprotkb/Q93YN8" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], 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"authors": "Son Seungmin, Oh Chang Jae, An Chung Sun", "reference": { "type": "PubMed", "id": "25289013", "url": "https://pubmed.ncbi.nlm.nih.gov/25289013" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93YN8-1", "protein_name": "Remorin 4.1", "gene_name": "REM4.1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FFA5-1", "protein_name": "Remorin 1.4", "gene_name": "MRO11.21; REM1.4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93758-1", "protein_name": "Remorin 4.2", "gene_name": "REM4.2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93YN8", "url": "https://www.uniprot.org/uniprotkb/Q93YN8" } ], "common_name": "Mouse-ear cress", "glygen_name": 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Academy of Sciences of the United States of America", "date": "2005-08-30", "authors": "Stevenson-Paulik Jill, Bastidas Robert J, Chiou Shean-Tai, Frye Roy A, York John D", "reference": { "type": "PubMed", "id": "16107538", "url": "https://pubmed.ncbi.nlm.nih.gov/16107538" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93YN9-1", "protein_name": "Inositol-pentakisphosphate 2-kinase", "gene_name": "IPK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLT2-1", "protein_name": "Inositol polyphosphate multikinase beta", "gene_name": "IPK2b", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93YN9", "url": "https://www.uniprot.org/uniprotkb/Q93YN9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16107538", "abstract": "", "glycosylation": [], 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Natl. Acad. Sci. U.S.A.", "date": "2010", "authors": "Gonz\u00e1lez Beatriz, Ba\u00f1os-Sanz Jose Ignacio, Villate Maider, Brearley Charles Alistair, Sanz-Aparicio Julia", "reference": { "type": "PubMed", "id": "20453199", "url": "https://pubmed.ncbi.nlm.nih.gov/20453199" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93YN9-1", "protein_name": "Inositol-pentakisphosphate 2-kinase", "gene_name": "IPK1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93YN9", "url": "https://www.uniprot.org/uniprotkb/Q93YN9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20453199", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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F", "date": "2012", "authors": "Ba\u00f1os-Sanz Jose Ignacio, Sanz-Aparicio Julia, Brearley Charles A, Gonz\u00e1lez Beatriz", "reference": { "type": "PubMed", "id": "22684075", "url": "https://pubmed.ncbi.nlm.nih.gov/22684075" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93YN9-1", "protein_name": "Inositol-pentakisphosphate 2-kinase", "gene_name": "IPK1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93YN9", "url": "https://www.uniprot.org/uniprotkb/Q93YN9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22684075", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Conformational changes in inositol 1,3,4,5,6-pentakisphosphate 2-kinase upon substrate binding: role of N-terminal lobe and enantiomeric substrate preference.", "journal": "J. Biol. Chem.", "date": "2012", "authors": "Ba\u00f1os-Sanz Jos\u00e9 Ignacio, Sanz-Aparicio Julia, Whitfield Hayley, Hamilton Chris, Brearley Charles A, Gonz\u00e1lez Beatriz", "reference": { "type": "PubMed", "id": "22745128", "url": "https://pubmed.ncbi.nlm.nih.gov/22745128" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93YN9-1", "protein_name": "Inositol-pentakisphosphate 2-kinase", "gene_name": "IPK1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93YN9", "url": "https://www.uniprot.org/uniprotkb/Q93YN9" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22745128", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure and evolution of linalool synthase.", "journal": "Mol. 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Evol.", "date": "1998", "authors": "Cseke L, Dudareva N, Pichersky E", "reference": { "type": "PubMed", "id": "12572612", "url": "https://pubmed.ncbi.nlm.nih.gov/12572612" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93YV0-1", "protein_name": "(E,E)-geranyllinalool synthase", "gene_name": "GES", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93YV0", "url": "https://www.uniprot.org/uniprotkb/Q93YV0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12572612", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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volatiles are biosynthesized by a single P450 enzyme (CYP82G1) in Arabidopsis.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2010", "authors": "Lee Sungbeom, Badieyan Somayesadat, Bevan David R, Herde Marco, Gatz Christiane, Tholl Dorothea", "reference": { "type": "PubMed", "id": "21088219", "url": "https://pubmed.ncbi.nlm.nih.gov/21088219" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93YV0-1", "protein_name": "(E,E)-geranyllinalool synthase", "gene_name": "GES", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LSF8-1", "protein_name": "Dimethylnonatriene synthase", "gene_name": "CYP82G1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93YV0", "url": "https://www.uniprot.org/uniprotkb/Q93YV0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21088219", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Cardiolipin synthase of Arabidopsis thaliana.", "journal": "FEBS letters", "date": "2005-04-11", "authors": "Nowicki Marcin, M\u00fcller Frank, Frentzen Margrit", "reference": { "type": "PubMed", "id": "15811335", "url": "https://pubmed.ncbi.nlm.nih.gov/15811335" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93YW7-1", "protein_name": "Cardiolipin synthase (CMP-forming)", "gene_name": "CLS", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q93YW7", "url": "https://www.uniprot.org/uniprotkb/Q93YW7" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 199, "end_pos": 199, "sequence_org": "G", "sequence_mut": "D", "comment": "Decreases activity 10-fold.", "evidence": [ { "database": "UniProtKB", "id": 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[] } ] }, { "title": "The elongata mutants identify a functional Elongator complex in plants with a role in cell proliferation during organ growth.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2005-05-24", "authors": "Nelissen Hilde, Fleury Delphine, Bruno Leonardo, Robles Pedro, De Veylder Lieven, Traas Jan, Micol Jos\u00e9 Luis, Van Montagu Marc, Inz\u00e9 Dirk, Van Lijsebettens Mieke", "reference": { "type": "PubMed", "id": "15894610", "url": "https://pubmed.ncbi.nlm.nih.gov/15894610" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q93ZR1-1", "protein_name": "Elongator complex protein 3", "gene_name": "HAG3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C778-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FNA4-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", 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