[ { "title": "Phosphate transport in Arabidopsis: Pht1;1 and Pht1;4 play a major role in phosphate acquisition from both low- and high-phosphate environments.", "journal": "The Plant journal : for cell and molecular biology", "date": "2004-08", "authors": "Shin Heungsop, Shin Hwa-Soo, Dewbre Gary R, Harrison Maria J", "reference": { "type": "PubMed", "id": "15272879", "url": "https://pubmed.ncbi.nlm.nih.gov/15272879" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VYM2-1", "protein_name": "Inorganic phosphate transporter 1-1", "gene_name": "PHT1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96303-1", "protein_name": "Inorganic phosphate transporter 1-4", "gene_name": "PHT1-4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VYM2", "url": "https://www.uniprot.org/uniprotkb/Q8VYM2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15272879", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Promoter of Arabidopsis thaliana phosphate transporter gene drives root-specific expression of transgene in rice.", "journal": "J. Biosci. Bioeng.", "date": "2005", "authors": "Koyama Takayoshi, Ono Toshiro, Shimizu Masami, Jinbo Tetsuro, Mizuno Rie, Tomita Keiji, Mitsukawa Norihiro, Kawazu Tetsu, Kimura Tetsuya, Ohmiya Kunio, Sakka Kazuo", "reference": { "type": "PubMed", "id": "16233751", "url": "https://pubmed.ncbi.nlm.nih.gov/16233751" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VYM2-1", "protein_name": "Inorganic phosphate transporter 1-1", "gene_name": "PHT1-1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VYM2", "url": "https://www.uniprot.org/uniprotkb/Q8VYM2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16233751", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1 is a plant-specific SEC12-related protein that enables the endoplasmic reticulum exit of a high-affinity phosphate transporter in Arabidopsis.", "journal": "Plant Cell", "date": "2005", "authors": "Gonz\u00e1lez Esperanza, Solano Roberto, Rubio Vicente, Leyva Antonio, Paz-Ares Javier", "reference": { "type": "PubMed", "id": "16284308", "url": "https://pubmed.ncbi.nlm.nih.gov/16284308" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VYM2-1", "protein_name": "Inorganic phosphate transporter 1-1", "gene_name": "PHT1-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GYE0-1", "protein_name": "SEC12-like protein 1", "gene_name": "PHF1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VYM2", "url": "https://www.uniprot.org/uniprotkb/Q8VYM2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16284308", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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[] } ] }, { "title": "The plastid-specific ribosomal proteins of Arabidopsis thaliana can be divided into non-essential proteins and genuine ribosomal proteins.", "journal": "Plant J.", "date": "2012", "authors": "Tiller Nadine, Weingartner Magdalena, Thiele Wolfram, Maximova Eugenia, Sch\u00f6ttler Mark A, Bock Ralph", "reference": { "type": "PubMed", "id": "21923745", "url": "https://pubmed.ncbi.nlm.nih.gov/21923745" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VYM4-1", "protein_name": "Small ribosomal subunit protein cS22", "gene_name": "PSRP2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92959-1", "protein_name": "Large ribosomal subunit protein uL24c", "gene_name": "RPL24", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VYM4", "url": "https://www.uniprot.org/uniprotkb/Q8VYM4" } ], "common_name": "Mouse-ear cress", "glygen_name": 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"Molecular and cellular biology", "date": "2005-12", "authors": "Ebbs Michelle L, Bartee Lisa, Bender Judith", "reference": { "type": "PubMed", "id": "16287862", "url": "https://pubmed.ncbi.nlm.nih.gov/16287862" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZ17-1", "protein_name": "Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6", "gene_name": "SUVH6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GZB6-1", "protein_name": "Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4", "gene_name": "SUVH4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VZ17", "url": "https://www.uniprot.org/uniprotkb/Q8VZ17" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16287862", "abstract": "", "glycosylation": [], "mutagenesis": [], 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Wurster Karl, Stahl Mark, Bassham Diane C, Vierstra Richard D, Parker Jane E, Bautor Jaqueline, Molina Antonio, Escudero Viviana, Shindo Takayuki, van der Hoorn Renier A L, Gust Andrea A, N\u00fcrnberger Thorsten", "reference": { "type": "PubMed", "id": "21332848", "url": "https://pubmed.ncbi.nlm.nih.gov/21332848" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZ52-1", "protein_name": "Ubiquitin-like-conjugating enzyme ATG10", "gene_name": "ATG10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VB2-1", "protein_name": "Autophagy-related protein 18a", "gene_name": "ATG18A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VZ52", "url": "https://www.uniprot.org/uniprotkb/Q8VZ52" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21332848", 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"21395886", "url": "https://pubmed.ncbi.nlm.nih.gov/21395886" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZ52-1", "protein_name": "Ubiquitin-like-conjugating enzyme ATG10", "gene_name": "ATG10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93VB2-1", "protein_name": "Autophagy-related protein 18a", "gene_name": "ATG18A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8S8P5-1", "protein_name": "Probable WRKY transcription factor 33", "gene_name": "WRKY33", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M367-1", "protein_name": "Beclin-1-like protein", "gene_name": "ATG6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VZ52", "url": "https://www.uniprot.org/uniprotkb/Q8VZ52" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], 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acetate activation for entry into the glyoxylate cycle.", "journal": "The Journal of biological chemistry", "date": "2005-01-28", "authors": "Turner James E, Greville Karen, Murphy Elaine C, Hooks Mark A", "reference": { "type": "PubMed", "id": "15533942", "url": "https://pubmed.ncbi.nlm.nih.gov/15533942" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZF1-1", "protein_name": "Acetate/butyrate--CoA ligase AAE7, peroxisomal", "gene_name": "AAE7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VZF1", "url": "https://www.uniprot.org/uniprotkb/Q8VZF1" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15533942", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures.", "journal": "Plant Physiol.", "date": "2004", "authors": "Guan Yu, Nothnagel Eugene A", "reference": { "type": "PubMed", "id": "15235117", "url": "https://pubmed.ncbi.nlm.nih.gov/15235117" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZG2-1", "protein_name": "Protein HYPER-SENSITIVITY-RELATED 4", "gene_name": "HSR4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGT8-1", "protein_name": "Temperature-induced lipocalin-1", "gene_name": "TIL", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VZG2", "url": "https://www.uniprot.org/uniprotkb/Q8VZG2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15235117", "abstract": "", 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Biol.", "date": "2005", "authors": "Pandey Ajay-Kumar, Ger Mang-Jye, Huang Hsiang-En, Yip Mei-Kuen, Zeng Jiqing, Feng Teng-Yung", "reference": { "type": "PubMed", "id": "16270229", "url": "https://pubmed.ncbi.nlm.nih.gov/16270229" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZG2-1", "protein_name": "Protein HYPER-SENSITIVITY-RELATED 4", "gene_name": "HSR4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VZG2", "url": "https://www.uniprot.org/uniprotkb/Q8VZG2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16270229", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"2017-05", "authors": "Mat\u00edas-Hern\u00e1ndez Luis, Jiang Weimin, Yang Ke, Tang Kexuan, Brodelius Peter E, Pelaz Soraya", "reference": { "type": "PubMed", "id": "28207974", "url": "https://pubmed.ncbi.nlm.nih.gov/28207974" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZQ2-1", "protein_name": "Transcription factor MYB61", "gene_name": "MYB61", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VZQ2", "url": "https://www.uniprot.org/uniprotkb/Q8VZQ2" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.28207974", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"The sng2 mutant of Arabidopsis is defective in the gene encoding the serine carboxypeptidase-like protein sinapoylglucose:choline sinapoyltransferase.", "journal": "The Plant journal : for cell and molecular biology", "date": "2001-10", "authors": "Shirley A M, McMichael C M, Chapple C", "reference": { "type": "PubMed", "id": "11696189", "url": "https://pubmed.ncbi.nlm.nih.gov/11696189" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VZU3-1", "protein_name": "Serine carboxypeptidase-like 19", "gene_name": "SCPL19", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8VZU3", "url": "https://www.uniprot.org/uniprotkb/Q8VZU3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11696189", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Alamillo J M, Sim\u00f3n-Mateo C, P\u00e9rez J J, Fern\u00e1ndez-Fern\u00e1ndez M R, Olszewski N E, Garc\u00eda J A", "reference": { "type": "PubMed", "id": "16014901", "url": "https://pubmed.ncbi.nlm.nih.gov/16014901" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M8Y0-1", "protein_name": "Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC", "gene_name": "SEC", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M8Y0", "url": "https://www.uniprot.org/uniprotkb/Q9M8Y0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16014901", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A single-nucleotide exon found in Arabidopsis.", "journal": "Sci. Rep.", "date": "2015", "authors": "Guo Lei, Liu Chun-Ming", "reference": { "type": "PubMed", "id": "26657562", "url": "https://pubmed.ncbi.nlm.nih.gov/26657562" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9M9L0-1", "protein_name": "Anaphase-promoting complex subunit 11", "gene_name": "APC11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9M9L0", "url": "https://www.uniprot.org/uniprotkb/Q9M9L0" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.26657562", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequence diversity and haplotype associations with phenotypic responses to crowding: GIGANTEA affects fruit set in Arabidopsis thaliana.", "journal": "Molecular ecology", "date": "2007-07", "authors": "Brock Marcus T, Tiffin Peter, Weinig Cynthia", "reference": { "type": "PubMed", "id": "17614917", "url": "https://pubmed.ncbi.nlm.nih.gov/17614917" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8W2F3-1", "protein_name": "Transcription factor PIF4", "gene_name": "PIF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80536-1", "protein_name": "Transcription factor PIF3", "gene_name": "PIF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q05466-1", "protein_name": "Homeobox-leucine zipper protein HAT4", "gene_name": "HAT4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8W2F3", 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Altered chloroplast biogenesis. Normal interaction with PIF proteins (e.g. PIF1 and PIF3), but defect in their degradation upon red light stimuli. 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Sammer Michaela, Koranda Manfred, Neum\u00fcller Ralph, Betschinger J\u00f6rg, Knoblich J\u00fcrgen A, Teige Markus, Eisenhaber Frank", "reference": { "type": "PubMed", "id": "19029837", "url": "https://pubmed.ncbi.nlm.nih.gov/19029837" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8W4I7-1", "protein_name": "Calcium-dependent protein kinase 13", "gene_name": "CPK13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38868-1", "protein_name": "Calcium-dependent protein kinase 9", "gene_name": "CPK9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38870-1", "protein_name": "Calcium-dependent protein kinase 2", "gene_name": "CPK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38872-1", "protein_name": "Calcium-dependent protein kinase 6", "gene_name": "CPK6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8W4I7", 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encoding a flower-specific transcription factor, is regulated by COP1.", "journal": "The Plant journal : for cell and molecular biology", "date": "2002-04", "authors": "Shin Byongchul, Choi Goh, Yi Hankuil, Yang Seungchan, Cho Insook, Kim Jonghyun, Lee Seunghee, Paek Nam-Chon, Kim Jae-Hong, Song Pill-Soon, Choi Giltsu", "reference": { "type": "PubMed", "id": "11967090", "url": "https://pubmed.ncbi.nlm.nih.gov/11967090" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LK95-1", "protein_name": "Transcription factor MYB21", "gene_name": "MYB21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43254-1", "protein_name": "E3 ubiquitin-protein ligase COP1", "gene_name": "COP1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LK95", "url": "https://www.uniprot.org/uniprotkb/Q9LK95" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", 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biology", "date": "2006-06", "authors": "Mandaokar Ajin, Thines Bryan, Shin Byongchul, Lange B Markus, Choi Goh, Koo Yeon J, Yoo Yung J, Choi Yang D, Choi Giltsu, Browse John", "reference": { "type": "PubMed", "id": "16805732", "url": "https://pubmed.ncbi.nlm.nih.gov/16805732" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9LK95-1", "protein_name": "Transcription factor MYB21", "gene_name": "MYB21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LD44-1", "protein_name": "NAC transcription factor 56", "gene_name": "NAC056", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SPG9-1", "protein_name": "Transcription factor MYB24", "gene_name": "MYB24", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9LK95", "url": "https://www.uniprot.org/uniprotkb/Q9LK95" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", 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Virol.", "date": "2004", "authors": "Dunoyer P, Thomas C, Harrison S, Revers F, Maule A", "reference": { "type": "PubMed", "id": "14963126", "url": "https://pubmed.ncbi.nlm.nih.gov/14963126" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9S736-1", "protein_name": "Protein OBERON 1", "gene_name": "OBE1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LUB7-1", "protein_name": "Protein OBERON 2", "gene_name": "OBE2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q9S736", "url": "https://www.uniprot.org/uniprotkb/Q9S736" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14963126", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"journal": "The Plant cell", "date": "2011-03", "authors": "Yang Xue-Yong, Chen Zi-Wei, Xu Tao, Qu Zhe, Pan Xiao-Di, Qin Xing-Hua, Ren Dong-Tao, Liu Guo-Qin", "reference": { "type": "PubMed", "id": "21406623", "url": "https://pubmed.ncbi.nlm.nih.gov/21406623" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8W1Y3-1", "protein_name": "Kinesin-like protein KIN-14F", "gene_name": "KIN14F; KP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SMX3-1", "protein_name": "Mitochondrial outer membrane protein porin 3", "gene_name": "VDAC3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q8W1Y3", "url": "https://www.uniprot.org/uniprotkb/Q8W1Y3" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21406623", "abstract": "", "glycosylation": [], "mutagenesis": 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