[ { "title": "The human enamel protein gene amelogenin is expressed from both the X and the Y chromosomes.", "journal": "Am. J. Hum. Genet.", "date": "1992", "authors": "Salido EC, Yen PH, Koprivnikar K, Yu LC, Shapiro LJ", "reference": { "type": "PubMed", "id": "1734713", "url": "https://pubmed.ncbi.nlm.nih.gov/1734713" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q99217-1", "protein_name": "Amelogenin, X isoform", "gene_name": "AMELX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99218-2", "protein_name": "Amelogenin, Y isoform", "gene_name": "AMELY", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q99217", "url": "https://www.uniprot.org/uniprotkb/Q99217" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1734713", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } 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Cloning of cytosolic 5'-nucleotidase-I.", "journal": "The Journal of biological chemistry", "date": "1999", "authors": "Sala-Newby GB, Skladanowski AC, Newby AC", "reference": { "type": "PubMed", "id": "10364222", "url": "https://pubmed.ncbi.nlm.nih.gov/10364222" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43598-1", "protein_name": "5-hydroxymethyl-dUMP N-hydrolase", "gene_name": 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"reference": { "type": "PubMed", "id": "10484776", "url": "https://pubmed.ncbi.nlm.nih.gov/10484776" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": 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human hydroxypyruvate/glyoxylate reductase.", "journal": "Biochimica et biophysica acta", "date": "1999", "authors": "Rumsby G, Cregeen DP", "reference": { "type": "PubMed", "id": "10524214", "url": "https://pubmed.ncbi.nlm.nih.gov/10524214" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Mammalian 5'(3')-deoxyribonucleotidase, cDNA cloning, and overexpression of the enzyme in Escherichia coli and mammalian cells.", "journal": "The Journal of biological chemistry", "date": "2000", "authors": "Rampazzo C, Johansson M, Gallinaro L, Ferraro P, Hellman U, Karlsson A, Reichard P, Bianchi V", "reference": { "type": "PubMed", "id": "10681516", "url": "https://pubmed.ncbi.nlm.nih.gov/10681516" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43598-1", "protein_name": "5-hydroxymethyl-dUMP N-hydrolase", "gene_name": "DNPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY32-1", "protein_name": "Inosine triphosphate pyrophosphatase", "gene_name": "ITPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96P26-1", "protein_name": "Cytosolic 5'-nucleotidase 1B", "gene_name": "NT5C1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00491-1", "protein_name": "Purine nucleoside phosphorylase", "gene_name": "PNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47989-1", "protein_name": "Xanthine dehydrogenase/oxidase", "gene_name": "XDH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2T3-1", "protein_name": "Guanine deaminase", "gene_name": "GDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49902-1", "protein_name": "Cytosolic purine 5'-nucleotidase", "gene_name": "NT5C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9JM14-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and characterization of HAOX1, HAOX2, and HAOX3, three human peroxisomal 2-hydroxy acid oxidases.", "journal": "The Journal of biological chemistry", "date": "2000", "authors": "Jones JM, Morrell JC, Gould SJ", "reference": { "type": "PubMed", "id": "10777549", "url": "https://pubmed.ncbi.nlm.nih.gov/10777549" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C024-1", "protein_name": "Peroxisomal coenzyme A diphosphatase NUDT7", "gene_name": "NUDT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MXV4-1", 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10989446", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43598-1", "protein_name": "5-hydroxymethyl-dUMP N-hydrolase", "gene_name": "DNPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY32-1", "protein_name": "Inosine triphosphate pyrophosphatase", "gene_name": "ITPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96P26-1", 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"uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49902-1", "protein_name": "Cytosolic purine 5'-nucleotidase", "gene_name": "NT5C2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11083867", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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"gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00491-1", "protein_name": "Purine nucleoside phosphorylase", "gene_name": "PNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47989-1", "protein_name": "Xanthine dehydrogenase/oxidase", "gene_name": "XDH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2T3-1", "protein_name": "Guanine deaminase", "gene_name": "GDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49902-1", "protein_name": 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"field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human mitochondrial 5'-deoxyribonucleotidase. Overproduction in cultured cells and functional aspects.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Gallinaro L, Crovatto K, Rampazzo C, Pontarin G, Ferraro P, Milanesi E, Reichard P, Bianchi V", "reference": { "type": "PubMed", "id": "12124385", "url": "https://pubmed.ncbi.nlm.nih.gov/12124385" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": 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deoxyribonucleotidase.", "journal": "Nature structural biology", "date": "2002", "authors": "Rinaldo-Matthis A, Rampazzo C, Reichard P, Bianchi V, Nordlund P", "reference": { "type": "PubMed", "id": "12352955", "url": "https://pubmed.ncbi.nlm.nih.gov/12352955" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel human uridine phosphorylase.", "journal": "Biochemical and biophysical research communications", "date": "2003", "authors": "Johansson M", "reference": { "type": "PubMed", "id": "12849978", "url": "https://pubmed.ncbi.nlm.nih.gov/12849978" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00142-1", "protein_name": "Thymidine kinase 2, mitochondrial", "gene_name": "TK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWZ5-1", "protein_name": "Uridine-cytidine kinase-like 1", "gene_name": "UCKL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { 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"uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12899834", "abstract": "", 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"n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mammalian 5'-nucleotidases.", "journal": "The Journal of biological chemistry", "date": "2003", "authors": "Bianchi V, Spychala J", "reference": { "type": "PubMed", "id": "12947102", "url": "https://pubmed.ncbi.nlm.nih.gov/12947102" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43598-1", "protein_name": "5-hydroxymethyl-dUMP N-hydrolase", "gene_name": "DNPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY32-1", "protein_name": "Inosine triphosphate pyrophosphatase", "gene_name": "ITPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96P26-1", "protein_name": "Cytosolic 5'-nucleotidase 1B", "gene_name": "NT5C1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00491-1", "protein_name": "Purine nucleoside phosphorylase", "gene_name": "PNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47989-1", "protein_name": "Xanthine dehydrogenase/oxidase", "gene_name": "XDH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2T3-1", "protein_name": "Guanine deaminase", "gene_name": "GDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49902-1", "protein_name": "Cytosolic purine 5'-nucleotidase", "gene_name": "NT5C2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12947102", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hydroxyproline metabolism. II. Enzymatic preparation and properties of Delta 1-pyrroline-3-hydroxy-5-carboxylic acid.", "journal": "The Journal of biological chemistry", "date": "1960", "authors": "ADAMS E, GOLDSTONE A", "reference": { "type": "PubMed", "id": "13681368", "url": "https://pubmed.ncbi.nlm.nih.gov/13681368" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.13681368", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hydroxyproline metabolism. IV. Enzymatic synthesis of gamma-hydroxyglutamate from Delta 1-pyrroline-3-hydroxy-5-carboxylate.", "journal": "The Journal of biological chemistry", "date": "1960", "authors": "ADAMS E, GOLDSTONE A", "reference": { "type": "PubMed", "id": "13681370", "url": "https://pubmed.ncbi.nlm.nih.gov/13681370" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43272-4", "protein_name": "Proline dehydrogenase 1, mitochondrial", "gene_name": "PRODH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.13681370", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": 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Hoffmann GF, Voit T, Wevers RA, Rutsch F, van Gennip AH", "reference": { "type": "PubMed", "id": "15385443", "url": "https://pubmed.ncbi.nlm.nih.gov/15385443" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": 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"Coulter-Mackie MB, Lian Q, Wong SG", "reference": { "type": "PubMed", "id": "15802217", "url": "https://pubmed.ncbi.nlm.nih.gov/15802217" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": 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has thymidine phosphorylase activity.", "journal": "Biochemical and biophysical research communications", "date": "1992", "authors": "Usuki K, Saras J, Waltenberger J, Miyazono K, Pierce G, Thomason A, Heldin CH", "reference": { "type": "PubMed", "id": "1590793", "url": "https://pubmed.ncbi.nlm.nih.gov/1590793" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00142-1", "protein_name": "Thymidine kinase 2, mitochondrial", "gene_name": "TK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWZ5-1", "protein_name": "Uridine-cytidine kinase-like 1", "gene_name": "UCKL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27707-1", "protein_name": "Deoxycytidine kinase", "gene_name": "DCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04183-1", "protein_name": "Thymidine kinase, cytosolic", "gene_name": "TK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32320-1", "protein_name": "Cytidine deaminase", "gene_name": "CDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08623-1", "protein_name": "Pseudouridine-5'-phosphatase", "gene_name": "PUDP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HA47-1", "protein_name": "Uridine-cytidine kinase 1", "gene_name": "UCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZX2-1", "protein_name": "Uridine-cytidine kinase 2", "gene_name": "UCK2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": 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D-aspartate oxidase from beef kidney.", "journal": "The Journal of biological chemistry", "date": "1992", "authors": "Negri A, Ceciliani F, Tedeschi G, Simonic T, Ronchi S", "reference": { "type": "PubMed", "id": "1601857", "url": "https://pubmed.ncbi.nlm.nih.gov/1601857" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", 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"P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1601857", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The importance of having a mentor, and how to find one.", "journal": "Gastrointestinal endoscopy", "date": "2006", "authors": "Stone CD", "reference": { "type": "PubMed", "id": "16377327", "url": "https://pubmed.ncbi.nlm.nih.gov/16377327" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of human D-amino acid oxidase.", "journal": "FEBS letters", "date": "2006", "authors": "Molla G, Sacchi S, Bernasconi M, Pilone MS, Fukui K, Polegioni L", "reference": { "type": "PubMed", "id": "16616139", "url": "https://pubmed.ncbi.nlm.nih.gov/16616139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of mutations associated with peroxisome-to-mitochondrion mistargeting of alanine/glyoxylate aminotransferase in primary hyperoxaluria type 1.", "journal": "The Journal of cell biology", "date": "1990", "authors": "Purdue PE, Takada Y, Danpure CJ", "reference": { "type": "PubMed", "id": "1703535", "url": "https://pubmed.ncbi.nlm.nih.gov/1703535" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": 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"uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1703535", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Purification and characterization of recombinant human liver glycolate oxidase.", "journal": "Archives of biochemistry and biophysics", "date": "2007", "authors": "Vignaud C, Pietrancosta N, Williams EL, Rumsby G, Lederer F", "reference": { "type": "PubMed", "id": "17669354", "url": "https://pubmed.ncbi.nlm.nih.gov/17669354" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": 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lowers asymmetric dimethylarginine and protects from inhibition of nitric oxide production.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Rodionov RN, Murry DJ, Vaulman SF, Stevens JW, Lentz SR", "reference": { "type": "PubMed", "id": "20018850", "url": "https://pubmed.ncbi.nlm.nih.gov/20018850" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "Q9BZQ4-1", "protein_name": "Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2", "gene_name": "NMNAT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y8-1", "protein_name": "Protein mono-ADP-ribosyltransferase PARP16", "gene_name": "PARP16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5VYX0-1", "protein_name": "Renalase", "gene_name": "RNLS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N695-1", "protein_name": "Sodium-coupled monocarboxylate transporter 1", "gene_name": "SLC5A8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y226-1", "protein_name": "Solute carrier family 22 member 13", "gene_name": "SLC22A13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H1U9-1", "protein_name": "Mitochondrial nicotinamide adenine dinucleotide transporter SLC25A51", "gene_name": "SLC25A51", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43598-1", "protein_name": "5-hydroxymethyl-dUMP N-hydrolase", "gene_name": "DNPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28907-1", "protein_name": "ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1", "gene_name": "CD38", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA69-1", "protein_name": "Glutamine-dependent NAD(+) synthetase", "gene_name": "NADSYN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95544-1", "protein_name": "NAD kinase", "gene_name": "NADK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96T66-1", "protein_name": "Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3", "gene_name": "NMNAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NWW6-1", "protein_name": "Nicotinamide riboside kinase 1", "gene_name": "NMRK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPI5-1", "protein_name": "Nicotinamide riboside kinase 2", "gene_name": "NMRK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY32-1", "protein_name": "Inosine triphosphate pyrophosphatase", "gene_name": "ITPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2NL67-1", "protein_name": "Protein mono-ADP-ribosyltransferase PARP6", "gene_name": "PARP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3A8-1", "protein_name": "Protein mono-ADP-ribosyltransferase PARP8", "gene_name": "PARP8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXQ6-1", "protein_name": "Protein mono-ADP-ribosyltransferase PARP9", "gene_name": "PARP9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96P26-1", "protein_name": "Cytosolic 5'-nucleotidase 1B", "gene_name": "NT5C1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BQG2-1", "protein_name": "NAD-capped RNA hydrolase NUDT12", "gene_name": "NUDT12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q53GL7-1", "protein_name": "Protein mono-ADP-ribosyltransferase PARP10", "gene_name": "PARP10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00491-1", "protein_name": "Purine nucleoside phosphorylase", "gene_name": "PNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NCW5-1", "protein_name": "NAD(P)H-hydrate epimerase", "gene_name": "NAXE", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47989-1", "protein_name": "Xanthine dehydrogenase/oxidase", "gene_name": "XDH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10588-1", "protein_name": "ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2", "gene_name": "BST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAN9-1", "protein_name": "Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1", "gene_name": "NMNAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6XQN6-1", "protein_name": "Nicotinate phosphoribosyltransferase", "gene_name": "NAPRT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2T3-1", "protein_name": "Guanine deaminase", "gene_name": "GDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW45-1", "protein_name": "ATP-dependent (S)-NAD(P)H-hydrate dehydratase", "gene_name": "NAXD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15274-1", "protein_name": "Nicotinate-nucleotide pyrophosphorylase [carboxylating]", "gene_name": "QPRT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49902-1", "protein_name": "Cytosolic purine 5'-nucleotidase", "gene_name": "NT5C2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2129526", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 46 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { 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"table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00491-1", "protein_name": "Purine nucleoside phosphorylase", "gene_name": "PNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47989-1", "protein_name": "Xanthine dehydrogenase/oxidase", "gene_name": "XDH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2T3-1", "protein_name": "Guanine deaminase", "gene_name": "GDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49902-1", "protein_name": "Cytosolic purine 5'-nucleotidase", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Alanine-glyoxylate aminotransferase-2 metabolizes endogenous methylarginines, regulates NO, and controls blood pressure.", "journal": "Arteriosclerosis, thrombosis, and vascular biology", "date": "2012", "authors": "Caplin B, Wang Z, Slaviero A, Tomlinson J, Dowsett L, Delahaye M, Salama A, Wheeler DC, Leiper J", "reference": { "type": "PubMed", "id": "23023372", "url": "https://pubmed.ncbi.nlm.nih.gov/23023372" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3UEG6-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "Agxt2", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Partial purification and properties of an AMP-specific soluble 5'-nucleotidase from pigeon heart.", "journal": "The Biochemical journal", "date": "1990", "authors": "Skladanowski AC, Newby AC", "reference": { "type": "PubMed", "id": "2344353", "url": "https://pubmed.ncbi.nlm.nih.gov/2344353" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43598-1", "protein_name": "5-hydroxymethyl-dUMP N-hydrolase", "gene_name": "DNPH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BY32-1", "protein_name": "Inosine triphosphate pyrophosphatase", "gene_name": "ITPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96P26-1", "protein_name": "Cytosolic 5'-nucleotidase 1B", "gene_name": "NT5C1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00491-1", "protein_name": "Purine nucleoside phosphorylase", "gene_name": "PNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P47989-1", "protein_name": "Xanthine dehydrogenase/oxidase", "gene_name": "XDH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2T3-1", "protein_name": "Guanine deaminase", "gene_name": "GDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49902-1", "protein_name": "Cytosolic purine 5'-nucleotidase", "gene_name": "NT5C2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2344353", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", 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"count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human peroxisomal L-alanine: glyoxylate aminotransferase. Evolutionary loss of a mitochondrial targeting signal by point mutation of the initiation codon.", "journal": "The Biochemical journal", "date": "1990", "authors": "Takada Y, Kaneko N, Esumi H, Purdue PE, Danpure CJ", "reference": { "type": "PubMed", "id": "2363689", "url": "https://pubmed.ncbi.nlm.nih.gov/2363689" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2363689", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", 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}, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Association of the AGXT2 V140I polymorphism with risk for coronary heart disease in a Chinese population.", "journal": "Journal of atherosclerosis and thrombosis", "date": "2014", "authors": "Zhou JP, Bai YP, Hu XL, Kuang DB, Shi RZ, Xiong Y, Zhang W, Xia J, Chen BL, Yang TL, Chen XP", "reference": { "type": "PubMed", "id": "24834905", "url": "https://pubmed.ncbi.nlm.nih.gov/24834905" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24834905", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43272-4", "protein_name": "Proline dehydrogenase 1, mitochondrial", "gene_name": "PRODH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25697095", "abstract": 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Ferdinandusse S", "reference": { "type": "PubMed", "id": "26858947", "url": "https://pubmed.ncbi.nlm.nih.gov/26858947" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Distribution of ecto-5'-nucleotidase on subsets of human T and B lymphocytes as detected by indirect immunofluorescence using goat antibodies.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "1987", "authors": "Thompson LF, Ruedi JM, Low MG, Clement LT", "reference": { "type": "PubMed", "id": "2826576", "url": "https://pubmed.ncbi.nlm.nih.gov/2826576" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2826576", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Kidney and liver are the main organs of expression of a key metabolic enzyme alanine:glyoxylate aminotransferase 2 in humans.", "journal": "Atheroscler. 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and sequencing of a cDNA encoding alanine-glyoxylate aminotransferase 2 from rat kidney.", "journal": "Journal of biochemistry", "date": "1995", "authors": "Lee IS, Muragaki Y, Ideguchi T, Hase T, Tsuji M, Ooshima A, Okuno E, Kido R", "reference": { "type": "PubMed", "id": "7592550", "url": "https://pubmed.ncbi.nlm.nih.gov/7592550" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q64565-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "Agxt2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q8TBG4-1", "protein_name": "Ethanolamine-phosphate phospho-lyase", "gene_name": "ETNPPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7592550", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "cDNA cloning and chromosome mapping of human dihydropyrimidine dehydrogenase, an enzyme associated with 5-fluorouracil toxicity and congenital thymine uraciluria.", "journal": "The Journal of biological chemistry", "date": "1994", "authors": "Yokota H, Fernandez-Salguero P, Furuya H, Lin K, McBride OW, Podschun B, Schnackerz KD, Gonzalez FJ", "reference": { "type": "PubMed", "id": "8083224", "url": "https://pubmed.ncbi.nlm.nih.gov/8083224" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q28943-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Pig" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8083224", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural and functional characterization of the human brain D-aspartate oxidase.", "journal": "Journal of biochemistry", "date": "1997", "authors": "Setoyama C, Miura R", "reference": { "type": "PubMed", "id": "9163533", "url": "https://pubmed.ncbi.nlm.nih.gov/9163533" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86XE5-1", "protein_name": "4-hydroxy-2-oxoglutarate aldolase, mitochondrial", "gene_name": "HOGA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UF12-1", "protein_name": "Hydroxyproline dehydrogenase", "gene_name": "PRODH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99489-1", "protein_name": "D-aspartate oxidase", "gene_name": "DDO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14749-1", "protein_name": "Glycine N-methyltransferase", "gene_name": "GNMT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30038-1", "protein_name": "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial", "gene_name": "ALDH4A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJM8-1", "protein_name": "2-Hydroxyacid oxidase 1", "gene_name": "HAO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21549-1", "protein_name": "Alanine--glyoxylate aminotransferase", "gene_name": "AGXT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBQ7-1", "protein_name": "Glyoxylate reductase/hydroxypyruvate reductase", "gene_name": "GRHPR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14920-1", "protein_name": "D-amino-acid oxidase", "gene_name": "DAO", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00505-1", "protein_name": "Aspartate aminotransferase, mitochondrial", "gene_name": "GOT2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9163533", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Dihydropyrimidinase deficiency: structural organization, chromosomal localization, and mutation analysis of the human dihydropyrimidinase gene.", "journal": "American journal of human genetics", "date": "1998", "authors": "Hamajima N, Kouwaki M, Vreken P, Matsuda K, Sumi S, Imaeda M, Ohba S, Kidouchi K, Nonaka M, Sasaki M, Tamaki N, Endo Y, De Abreu R, Rotteveel J, van Kuilenburg A, van Gennip A, Togari H, Wada Y", "reference": { "type": "PubMed", "id": "9718352", "url": "https://pubmed.ncbi.nlm.nih.gov/9718352" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BYV1-1", "protein_name": "Alanine--glyoxylate aminotransferase 2, mitochondrial", "gene_name": "AGXT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPB1-1", "protein_name": "5'(3')-deoxyribonucleotidase, mitochondrial", "gene_name": "NT5M", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD5-1", "protein_name": "5'(3')-deoxyribonucleotidase, cytosolic type", "gene_name": "NT5C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95045-1", "protein_name": "Uridine phosphorylase 2", "gene_name": "UPP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBR1-1", "protein_name": "Beta-ureidopropionase", "gene_name": "UPB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21589-1", "protein_name": "5'-nucleotidase", "gene_name": "NT5E", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXI3-1", "protein_name": "Cytosolic 5'-nucleotidase 1A", "gene_name": "NT5C1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19971-1", "protein_name": "Thymidine phosphorylase", "gene_name": "TYMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14117-1", "protein_name": "Dihydropyrimidinase", "gene_name": "DPYS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12882-1", "protein_name": "Dihydropyrimidine dehydrogenase [NADP(+)]", "gene_name": "DPYD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16831-1", "protein_name": "Uridine phosphorylase 1", "gene_name": "UPP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BYV1", "url": "https://www.uniprot.org/uniprotkb/Q9BYV1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9718352", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 11 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] 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"taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H2P0", "url": "https://www.uniprot.org/uniprotkb/Q9H2P0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19923857", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A SWI/SNF-related autism syndrome caused by de novo mutations in ADNP.", "journal": "Nat. Genet.", "date": "2014", "authors": "Helsmoortel C\u00e9line, Vulto-van Silfhout Anneke T, Coe Bradley P, Vandeweyer Geert, Rooms Liesbeth, van den Ende Jenneke, Schuurs-Hoeijmakers Janneke H M, Marcelis Carlo L, Willemsen Marjolein H, Vissers Lisenka E L M, Yntema Helger G, Bakshi Madhura, Wilson Meredith, Witherspoon Kali T, Malmgren Helena, Nordgren Ann, Anner\u00e9n G\u00f6ran, Fichera Marco, Bosco Paolo, Romano Corrado, de Vries Bert B A, Kleefstra Tjitske, Kooy R Frank, Eichler Evan E, Van der Aa Nathalie", "reference": { "type": "PubMed", "id": "24531329", "url": "https://pubmed.ncbi.nlm.nih.gov/24531329" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2P0-1", "protein_name": "Activity-dependent neuroprotector homeobox protein", "gene_name": "ADNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13185-1", "protein_name": "Chromobox protein homolog 3", "gene_name": "CBX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83916-1", "protein_name": "Chromobox protein homolog 1", "gene_name": "CBX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ32-1", "protein_name": "Activity-dependent neuroprotector homeobox protein 2", "gene_name": "ADNP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H2P0", "url": "https://www.uniprot.org/uniprotkb/Q9H2P0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24531329", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 32 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Activity-dependent neuroprotective protein recruits HP1 and CHD4 to control lineage-specifying genes.", "journal": "Nature", "date": "2018", "authors": "Ostapcuk V, Mohn F, Carl SH, Basters A, Hess D, Iesmantavicius V, Lampersberger L, Flemr M, Pandey A, Thoma NH, Betschinger J, Buhler M", "reference": { "type": "PubMed", "id": "29795351", "url": "https://pubmed.ncbi.nlm.nih.gov/29795351" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H2P0-1", "protein_name": "Activity-dependent neuroprotector homeobox protein", "gene_name": "ADNP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13185-1", "protein_name": "Chromobox protein homolog 3", "gene_name": "CBX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P83916-1", "protein_name": "Chromobox protein homolog 1", "gene_name": "CBX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IQ32-1", "protein_name": "Activity-dependent neuroprotector homeobox protein 2", "gene_name": "ADNP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": 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"uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { 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"uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00762-1", "protein_name": "Ubiquitin-conjugating enzyme E2 C", "gene_name": "UBE2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13761-1", "protein_name": "Runt-related transcription factor 3", "gene_name": "RUNX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01106-2", "protein_name": "Myc proto-oncogene protein", "gene_name": "MYC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51965-1", "protein_name": "Ubiquitin-conjugating enzyme E2 E1", "gene_name": "UBE2E1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9B1-1", "protein_name": "Histone-lysine N-methyltransferase EHMT1", "gene_name": "EHMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCS4-1", "protein_name": "Transcription factor 7-like 1", "gene_name": "TCF7L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13042-1", "protein_name": "Cell division cycle protein 16 homolog", "gene_name": "CDC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM11-1", "protein_name": "Fizzy-related protein homolog", "gene_name": "FZR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHZ8-1", "protein_name": "Anaphase-promoting complex subunit CDC26", "gene_name": "CDC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95231-1", "protein_name": "Homeobox protein VENTX", "gene_name": "VENTX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04206-1", "protein_name": "Transcription factor p65", "gene_name": "RELA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10201372", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 43 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The cyclin D1 gene is a target of the beta-catenin/LEF-1 pathway.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1999", "authors": "Shtutman M, Zhurinsky J, Simcha I, Albanese C, D'Amico M, Pestell R, Ben-Ze'ev A", "reference": { "type": "PubMed", "id": "10318916", "url": "https://pubmed.ncbi.nlm.nih.gov/10318916" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJX4-1", "protein_name": "Anaphase-promoting complex subunit 5", "gene_name": "ANAPC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJX5-1", "protein_name": "Anaphase-promoting complex subunit 4", "gene_name": "ANAPC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H1A4-1", "protein_name": "Anaphase-promoting complex subunit 1", "gene_name": "ANAPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60006-1", "protein_name": "Anaphase-promoting complex subunit 15", "gene_name": "ANAPC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJX3-1", "protein_name": "Anaphase-promoting complex subunit 7", "gene_name": "ANAPC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DE5-1", "protein_name": "Anaphase-promoting complex subunit 16", "gene_name": "ANAPC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19838-1", "protein_name": "Nuclear factor NF-kappa-B p105 subunit", "gene_name": "NFKB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07333-1", "protein_name": "Macrophage colony-stimulating factor 1 receptor", "gene_name": "CSF1R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05231-1", "protein_name": "Interleukin-6", "gene_name": "IL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42771-1", "protein_name": "Cyclin-dependent kinase inhibitor 2A", "gene_name": "CDKN2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KQ7-1", "protein_name": "Histone-lysine N-methyltransferase EHMT2", "gene_name": "EHMT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51668-1", "protein_name": "Ubiquitin-conjugating enzyme E2 D1", "gene_name": "UBE2D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17676-1", "protein_name": "CCAAT/enhancer-binding protein beta", "gene_name": "CEBPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36402-5", "protein_name": "Transcription factor 7", "gene_name": "TCF7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJU2-1", "protein_name": "Lymphoid enhancer-binding factor 1", "gene_name": "LEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQB0-1", "protein_name": "Transcription factor 7-like 2", "gene_name": "TCF7L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35222-1", "protein_name": "Catenin beta-1", "gene_name": "CTNNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16763-1", "protein_name": "Ubiquitin-conjugating enzyme E2 S", "gene_name": "UBE2S", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM13-1", "protein_name": "Anaphase-promoting complex subunit 10", "gene_name": "ANAPC10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJX6-1", "protein_name": "Anaphase-promoting complex subunit 2", "gene_name": "ANAPC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJX2-1", "protein_name": "Cell division cycle protein 23 homolog", "gene_name": "CDC23", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYG5-1", "protein_name": "Anaphase-promoting complex subunit 11", "gene_name": "ANAPC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24385-1", "protein_name": "G1/S-specific cyclin-D1", "gene_name": "CCND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30260-1", "protein_name": "Cell division cycle protein 27 homolog", "gene_name": "CDC27", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00762-1", "protein_name": "Ubiquitin-conjugating enzyme E2 C", "gene_name": "UBE2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13761-1", "protein_name": "Runt-related transcription factor 3", "gene_name": "RUNX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01106-2", "protein_name": "Myc proto-oncogene protein", "gene_name": "MYC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51965-1", "protein_name": "Ubiquitin-conjugating enzyme E2 E1", "gene_name": "UBE2E1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9B1-1", "protein_name": "Histone-lysine N-methyltransferase EHMT1", "gene_name": "EHMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCS4-1", "protein_name": "Transcription factor 7-like 1", "gene_name": "TCF7L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13042-1", "protein_name": "Cell division cycle protein 16 homolog", "gene_name": "CDC16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UM11-1", "protein_name": "Fizzy-related protein homolog", "gene_name": "FZR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHZ8-1", "protein_name": "Anaphase-promoting complex subunit CDC26", "gene_name": "CDC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95231-1", "protein_name": "Homeobox protein VENTX", "gene_name": "VENTX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04206-1", "protein_name": "Transcription factor p65", "gene_name": "RELA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10318916", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 43 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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"gene_name": "CTNNA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14923-1", "protein_name": "Junction plakoglobin", "gene_name": "JUP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60716-1", "protein_name": "Catenin delta-1", "gene_name": "CTNND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55287-1", "protein_name": "Cadherin-11", "gene_name": "CDH11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZ11-1", "protein_name": "Disintegrin and metalloproteinase domain-containing protein 33", "gene_name": "ADAM33", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10320525", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 16 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Oligomerization is required for p53 to be efficiently ubiquitinated by MDM2.", "journal": "The Journal of biological chemistry", "date": "1999", "authors": "Maki CG", "reference": { "type": "PubMed", "id": "10347217", "url": "https://pubmed.ncbi.nlm.nih.gov/10347217" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC52-1", "protein_name": "Chromobox protein homolog 8", "gene_name": "CBX8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", 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"uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42772-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor B", "gene_name": "CDKN2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15910-1", "protein_name": "Histone-lysine N-methyltransferase EZH2", "gene_name": "EZH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14781-1", "protein_name": "Chromobox protein homolog 2", "gene_name": "CBX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10599-1", "protein_name": "Thioredoxin", "gene_name": "TXN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKE5-1", "protein_name": "TRAF2 and NCK-interacting protein kinase", "gene_name": "TNIK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45985-1", "protein_name": "Dual specificity 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95503-1", "protein_name": "Chromobox protein homolog 6", "gene_name": "CBX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35226-1", "protein_name": "Polycomb complex protein BMI-1", "gene_name": "BMI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78364-1", "protein_name": "Polyhomeotic-like protein 1", "gene_name": "PHC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99496-1", "protein_name": "E3 ubiquitin-protein ligase RING2", "gene_name": "RNF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06587-1", "protein_name": "E3 ubiquitin-protein ligase RING1", "gene_name": "RING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14188-1", "protein_name": "Transcription factor 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"H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11802-1", "protein_name": "Cyclin-dependent kinase 4", "gene_name": "CDK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00534-1", "protein_name": "Cyclin-dependent kinase 6", "gene_name": "CDK6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42773-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor C", "gene_name": "CDKN2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14186-1", "protein_name": "Transcription factor Dp-1", "gene_name": "TFDP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00716-1", "protein_name": "Transcription factor E2F3", "gene_name": "E2F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14209-1", "protein_name": "Transcription factor E2F2", "gene_name": "E2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15054-2", "protein_name": "Lysine-specific demethylase 6B", "gene_name": "KDM6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15759-1", "protein_name": "Mitogen-activated protein kinase 11", "gene_name": "MAPK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15022-1", "protein_name": "Polycomb protein SUZ12", "gene_name": "SUZ12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00257-1", "protein_name": "E3 SUMO-protein ligase CBX4", "gene_name": "CBX4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99683-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 5", "gene_name": "MAP3K5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10347217", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"authors": "Lutterbach B, Westendorf JJ, Linggi B, Isaac S, Seto E, Hiebert SW", "reference": { "type": "PubMed", "id": "10617663", "url": "https://pubmed.ncbi.nlm.nih.gov/10617663" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96LA8-1", "protein_name": "Protein arginine N-methyltransferase 6", "gene_name": "PRMT6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15047-1", "protein_name": "Histone-lysine 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"protein_name": "Set1/Ash2 histone methyltransferase complex subunit ASH2", "gene_name": "ASH2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C005-1", "protein_name": "Protein dpy-30 homolog", "gene_name": "DPY30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99873-1", "protein_name": "Protein arginine N-methyltransferase 1", "gene_name": "PRMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", 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"uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04759-1", "protein_name": "Protein kinase C theta type", "gene_name": "PRKCQ", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24844-1", "protein_name": "Myosin regulatory light polypeptide 9", "gene_name": "MYL9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, 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"uniprot_canonical_ac": "O95503-1", "protein_name": "Chromobox protein homolog 6", "gene_name": "CBX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35226-1", "protein_name": "Polycomb complex protein BMI-1", "gene_name": "BMI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78364-1", "protein_name": "Polyhomeotic-like protein 1", "gene_name": "PHC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99496-1", "protein_name": "E3 ubiquitin-protein ligase RING2", "gene_name": "RNF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06587-1", "protein_name": "E3 ubiquitin-protein ligase RING1", "gene_name": "RING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14188-1", "protein_name": "Transcription factor Dp-2", "gene_name": "TFDP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", 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{ "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11802-1", "protein_name": "Cyclin-dependent kinase 4", "gene_name": "CDK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00534-1", "protein_name": "Cyclin-dependent kinase 6", "gene_name": "CDK6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42773-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor C", "gene_name": "CDKN2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14186-1", "protein_name": "Transcription factor Dp-1", "gene_name": "TFDP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00716-1", "protein_name": "Transcription factor E2F3", "gene_name": "E2F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14209-1", "protein_name": "Transcription factor E2F2", "gene_name": "E2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15054-2", "protein_name": "Lysine-specific demethylase 6B", "gene_name": "KDM6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone 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"protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10772813", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 91 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural basis for the heterodimeric interaction between the acute leukaemia-associated transcription factors AML1 and CBFbeta.", "journal": "The EMBO journal", "date": "2000", "authors": "Warren AJ, Bravo J, Williams RL, Rabbitts TH", "reference": { "type": "PubMed", "id": "10856244", "url": "https://pubmed.ncbi.nlm.nih.gov/10856244" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13951-1", "protein_name": "Core-binding factor subunit beta", "gene_name": "CBFB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29590-1", "protein_name": "Protein PML", "gene_name": "PML", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30281-1", "protein_name": "G1/S-specific cyclin-D3", "gene_name": "CCND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01196-1", "protein_name": "Runt-related transcription factor 1", "gene_name": "RUNX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06124-2", "protein_name": "Tyrosine-protein phosphatase non-receptor type 11", "gene_name": "PTPN11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24385-1", "protein_name": "G1/S-specific cyclin-D1", "gene_name": "CCND1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P30279-1", "protein_name": "G1/S-specific cyclin-D2", "gene_name": "CCND2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00534-1", "protein_name": "Cyclin-dependent kinase 6", "gene_name": "CDK6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12931-1", "protein_name": "Proto-oncogene tyrosine-protein kinase Src", "gene_name": "SRC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10856244", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "c-Jun inhibits transforming growth factor beta-mediated transcription by repressing Smad3 transcriptional activity.", "journal": "The Journal of biological chemistry", "date": "2000", "authors": "Dennler S, Prunier C, Ferrand N, Gauthier JM, Atfi A", "reference": { "type": "PubMed", "id": "10871633", "url": "https://pubmed.ncbi.nlm.nih.gov/10871633" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC52-1", "protein_name": "Chromobox protein homolog 8", "gene_name": "CBX8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B 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}, { "uniprot_canonical_ac": "P52564-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 6", "gene_name": "MAP2K6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16644-1", "protein_name": "MAP kinase-activated protein kinase 3", "gene_name": "MAPKAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49137-1", "protein_name": "MAP kinase-activated protein kinase 2", "gene_name": "MAPKAPK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW41-1", "protein_name": "MAP kinase-activated protein kinase 5", "gene_name": "MAPKAPK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14733-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 7", "gene_name": "MAP2K7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDX5-1", "protein_name": "Polyhomeotic-like protein 3", "gene_name": "PHC3", 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"uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13498-1", "protein_name": "Cytochrome b-245 light chain", "gene_name": "CYBA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFA2-1", "protein_name": "NADPH oxidase organizer 1", "gene_name": "NOXO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95819-1", "protein_name": "Mitogen-activated protein kinase kinase kinase kinase 4", "gene_name": "MAP4K4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41221-1", "protein_name": "Protein Wnt-5a", "gene_name": "WNT5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55273-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor D", "gene_name": "CDKN2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95503-1", "protein_name": "Chromobox protein homolog 6", "gene_name": "CBX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35226-1", "protein_name": "Polycomb complex protein BMI-1", "gene_name": "BMI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78364-1", "protein_name": "Polyhomeotic-like protein 1", "gene_name": "PHC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99496-1", "protein_name": "E3 ubiquitin-protein ligase RING2", "gene_name": "RNF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06587-1", "protein_name": "E3 ubiquitin-protein ligase RING1", "gene_name": "RING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14188-1", "protein_name": "Transcription factor Dp-2", "gene_name": "TFDP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4C8-1", "protein_name": "Misshapen-like kinase 1", "gene_name": "MINK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01574-1", "protein_name": "Interferon beta", "gene_name": "IFNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11802-1", "protein_name": "Cyclin-dependent kinase 4", "gene_name": "CDK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00534-1", "protein_name": "Cyclin-dependent kinase 6", "gene_name": "CDK6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42773-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor C", "gene_name": "CDKN2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14186-1", "protein_name": "Transcription factor Dp-1", "gene_name": "TFDP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00716-1", "protein_name": "Transcription factor E2F3", "gene_name": "E2F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14209-1", "protein_name": "Transcription factor E2F2", "gene_name": "E2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15054-2", "protein_name": "Lysine-specific demethylase 6B", "gene_name": "KDM6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15759-1", "protein_name": "Mitogen-activated protein kinase 11", "gene_name": "MAPK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UR1-1", "protein_name": "NADPH oxidase activator 1", "gene_name": "NOXA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15022-1", "protein_name": "Polycomb protein SUZ12", "gene_name": "SUZ12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92997-1", "protein_name": "Segment polarity protein dishevelled homolog DVL-3", "gene_name": "DVL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00257-1", "protein_name": "E3 SUMO-protein ligase CBX4", "gene_name": "CBX4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99683-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 5", "gene_name": "MAP3K5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10871633", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 101 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Induction, binding specificity and function of human ICOS.", "journal": "European journal of immunology", "date": "2000", "authors": "Beier KC, Hutloff A, Dittrich AM, Heuck C, Rauch A, Buchner K, Ludewig B, Ochs HD, Mages HW, Kroczek RA", "reference": { "type": "PubMed", "id": "11169414", "url": "https://pubmed.ncbi.nlm.nih.gov/11169414" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06400-1", "protein_name": "Retinoblastoma-associated protein", "gene_name": "RB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42229-1", "protein_name": "Signal transducer and activator of transcription 5A", "gene_name": "STAT5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26358-1", "protein_name": "DNA (cytosine-5)-methyltransferase 1", "gene_name": "DNMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17275-1", "protein_name": "Transcription factor JunB", "gene_name": "JUNB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13616-1", "protein_name": "Cullin-1", "gene_name": "CUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13651-1", "protein_name": "Interleukin-10 receptor subunit alpha", "gene_name": "IL10RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17676-1", "protein_name": "CCAAT/enhancer-binding protein beta", "gene_name": "CEBPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16548-1", "protein_name": "Bcl-2-related protein A1", "gene_name": "BCL2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29350-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 6", "gene_name": "PTPN6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08050-1", "protein_name": "Forkhead box protein M1", "gene_name": "FOXM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62877-1", "protein_name": "E3 ubiquitin-protein ligase RBX1", "gene_name": "RBX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06748-1", "protein_name": "Nucleophosmin", "gene_name": "NPM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15672-1", "protein_name": "Twist-related protein 1", "gene_name": "TWIST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15306-1", "protein_name": "Interferon regulatory factor 4", "gene_name": "IRF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6W8-1", "protein_name": "Inducible T-cell costimulator", "gene_name": "ICOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62753-1", "protein_name": "Small ribosomal subunit protein eS6", "gene_name": "RPS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14635-1", "protein_name": "G2/mitotic-specific cyclin-B1", "gene_name": "CCNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43403-1", "protein_name": "Tyrosine-protein kinase ZAP-70", "gene_name": "ZAP70", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10144-1", "protein_name": "Granzyme B", "gene_name": "GZMB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14222-1", "protein_name": "Perforin-1", "gene_name": "PRF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WB0-1", "protein_name": "Zinc finger C3HC-type protein 1", "gene_name": "ZC3HC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63208-1", "protein_name": "S-phase kinase-associated protein 1", "gene_name": "SKP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } 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"uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01094-1", "protein_name": "Transcription factor E2F1", "gene_name": "E2F1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41134-1", "protein_name": "DNA-binding protein inhibitor ID-1", "gene_name": "ID1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42771-1", "protein_name": "Cyclin-dependent kinase inhibitor 2A", "gene_name": "CDKN2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42772-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor B", "gene_name": "CDKN2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15036-1", "protein_name": "Protein C-ets-2", "gene_name": "ETS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide 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"CDK6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42773-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor C", "gene_name": "CDKN2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14186-1", "protein_name": "Transcription factor Dp-1", "gene_name": "TFDP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00716-1", "protein_name": "Transcription factor E2F3", "gene_name": "E2F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14209-1", "protein_name": "Transcription factor E2F2", "gene_name": "E2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08047-1", "protein_name": "Transcription factor Sp1", "gene_name": "SP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11234019", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Use of chromatin immunoprecipitation to clone novel E2F target promoters.", "journal": "Molecular and cellular biology", "date": "2001", "authors": "Weinmann AS, Bartley SM, Zhang T, Zhang MQ, Farnham PJ", "reference": { "type": "PubMed", "id": "11564866", "url": "https://pubmed.ncbi.nlm.nih.gov/11564866" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCK5-1", "protein_name": "Protein argonaute-4", "gene_name": "AGO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HC52-1", "protein_name": "Chromobox protein homolog 8", "gene_name": "CBX8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL18-1", "protein_name": "Protein argonaute-1", "gene_name": "AGO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPQ9-3", "protein_name": "Trinucleotide repeat-containing gene 6B protein", "gene_name": "TNRC6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCJ0-3", "protein_name": "Trinucleotide repeat-containing gene 6C protein", "gene_name": "TNRC6C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10276-1", "protein_name": "Retinoic acid receptor alpha", "gene_name": "RARA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16539-1", "protein_name": "Mitogen-activated protein kinase 14", "gene_name": "MAPK14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28482-1", "protein_name": "Mitogen-activated protein kinase 1", "gene_name": "MAPK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45984-1", "protein_name": "Mitogen-activated protein kinase 9", "gene_name": "MAPK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01094-1", "protein_name": "Transcription factor E2F1", "gene_name": "E2F1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53779-1", "protein_name": "Mitogen-activated protein kinase 10", "gene_name": "MAPK10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15744-1", "protein_name": "CCAAT/enhancer-binding protein epsilon", "gene_name": "CEBPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99062-1", "protein_name": "Granulocyte colony-stimulating factor receptor", "gene_name": "CSF3R", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52564-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 6", "gene_name": "MAP2K6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17542-1", "protein_name": "T-cell acute lymphocytic leukemia protein 1", "gene_name": "TAL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16644-1", "protein_name": "MAP kinase-activated protein kinase 3", "gene_name": "MAPKAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49137-1", "protein_name": "MAP kinase-activated protein kinase 2", "gene_name": "MAPKAPK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13951-1", "protein_name": "Core-binding factor subunit beta", "gene_name": "CBFB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IW41-1", "protein_name": "MAP kinase-activated protein kinase 5", "gene_name": "MAPKAPK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13887-1", "protein_name": "Krueppel-like factor 5", "gene_name": "KLF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14733-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 7", "gene_name": "MAP2K7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08887-1", "protein_name": "Interleukin-6 receptor subunit alpha", "gene_name": "IL6R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDX5-1", "protein_name": "Polyhomeotic-like protein 3", "gene_name": "PHC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75530-1", "protein_name": "Polycomb protein EED", "gene_name": "EED", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42771-1", "protein_name": "Cyclin-dependent kinase inhibitor 2A", "gene_name": "CDKN2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42772-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor B", "gene_name": "CDKN2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15910-1", "protein_name": "Histone-lysine N-methyltransferase EZH2", "gene_name": "EZH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17676-1", "protein_name": "CCAAT/enhancer-binding protein beta", "gene_name": "CEBPB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49715-1", "protein_name": "CCAAT/enhancer-binding protein alpha", "gene_name": "CEBPA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01196-1", "protein_name": "Runt-related transcription factor 1", "gene_name": "RUNX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14781-1", "protein_name": "Chromobox protein homolog 2", "gene_name": "CBX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10599-1", "protein_name": "Thioredoxin", "gene_name": "TXN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35659-1", "protein_name": "Protein DEK", "gene_name": "DEK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJU2-1", "protein_name": "Lymphoid enhancer-binding factor 1", "gene_name": "LEF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKE5-1", "protein_name": "TRAF2 and NCK-interacting protein kinase", "gene_name": "TNIK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01543-1", "protein_name": "Friend leukemia integration 1 transcription factor", "gene_name": "FLI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45985-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 4", "gene_name": "MAP2K4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46734-1", "protein_name": "Dual specificity mitogen-activated protein kinase kinase 3", "gene_name": "MAP2K3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXK0-1", "protein_name": "Polyhomeotic-like protein 2", "gene_name": "PHC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03164-1", "protein_name": "Histone-lysine N-methyltransferase 2A", "gene_name": "KMT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9G7-1", "protein_name": "Protein argonaute-3", "gene_name": "AGO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10242-1", "protein_name": "Transcriptional activator Myb", "gene_name": "MYB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95819-1", "protein_name": "Mitogen-activated protein kinase kinase kinase kinase 4", "gene_name": "MAP4K4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17947-1", "protein_name": "Transcription factor PU.1", "gene_name": "SPI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45983-1", "protein_name": "Mitogen-activated protein kinase 8", "gene_name": "MAPK8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40763-1", "protein_name": "Signal transducer and activator of transcription 3", "gene_name": "STAT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23769-1", "protein_name": "Endothelial transcription factor GATA-2", "gene_name": "GATA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62979-1", "protein_name": "Ubiquitin-ribosomal protein eS31 fusion protein", "gene_name": "RPS27A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55273-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor D", "gene_name": "CDKN2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99684-1", "protein_name": "Zinc finger protein Gfi-1", "gene_name": "GFI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCE1-1", "protein_name": "RNA helicase MOV-10", "gene_name": "MOV10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95503-1", "protein_name": "Chromobox protein homolog 6", "gene_name": "CBX6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35226-1", "protein_name": "Polycomb complex protein BMI-1", "gene_name": "BMI1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01106-2", "protein_name": "Myc proto-oncogene protein", "gene_name": "MYC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78364-1", "protein_name": "Polyhomeotic-like protein 1", "gene_name": "PHC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99496-1", "protein_name": "E3 ubiquitin-protein ligase RING2", "gene_name": "RNF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06587-1", "protein_name": "E3 ubiquitin-protein ligase RING1", "gene_name": "RING1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14188-1", "protein_name": "Transcription factor Dp-2", "gene_name": "TFDP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N4C8-1", "protein_name": "Misshapen-like kinase 1", "gene_name": "MINK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01574-1", "protein_name": "Interferon beta", "gene_name": "IFNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11802-1", "protein_name": "Cyclin-dependent kinase 4", "gene_name": "CDK4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38936-1", "protein_name": "Cyclin-dependent kinase inhibitor 1", "gene_name": "CDKN1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24941-1", "protein_name": "Cyclin-dependent kinase 2", "gene_name": "CDK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00534-1", "protein_name": "Cyclin-dependent kinase 6", "gene_name": "CDK6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42773-1", "protein_name": "Cyclin-dependent kinase 4 inhibitor C", "gene_name": "CDKN2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG47-1", "protein_name": "Polyubiquitin-B", "gene_name": "UBB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27361-1", "protein_name": "Mitogen-activated protein kinase 3", "gene_name": "MAPK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62987-1", "protein_name": "Ubiquitin-ribosomal protein eL40 fusion protein", "gene_name": "UBA52", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14186-1", "protein_name": "Transcription factor Dp-1", "gene_name": "TFDP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00716-1", "protein_name": "Transcription factor E2F3", "gene_name": "E2F3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14209-1", "protein_name": "Transcription factor E2F2", "gene_name": "E2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15054-2", "protein_name": "Lysine-specific demethylase 6B", "gene_name": "KDM6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15759-1", "protein_name": "Mitogen-activated protein kinase 11", "gene_name": "MAPK11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15022-1", "protein_name": "Polycomb protein SUZ12", "gene_name": "SUZ12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01100-1", "protein_name": "Protein c-Fos", "gene_name": "FOS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05412-1", "protein_name": "Transcription factor Jun", "gene_name": "JUN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15151-1", "protein_name": "Protein Mdm4", "gene_name": "MDM4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00257-1", "protein_name": "E3 SUMO-protein ligase CBX4", "gene_name": "CBX4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99683-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 5", "gene_name": "MAP3K5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0CG48-1", "protein_name": "Polyubiquitin-C", "gene_name": "UBC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00987-1", "protein_name": "E3 ubiquitin-protein ligase Mdm2", "gene_name": "MDM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04637-1", "protein_name": "Cellular tumor antigen p53", "gene_name": "TP53", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCK5", "url": "https://www.uniprot.org/uniprotkb/Q9HCK5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11564866", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 115 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]