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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Coregulator Sin3a Promotes Postnatal Murine beta-Cell Fitness by Regulating Genes in Ca(2+) Homeostasis, Cell Survival, Vesicle Biosynthesis, Glucose Metabolism, and Stress Response.", "journal": "Diabetes", "date": "2020", "authors": "Yang X, Graff SM, Heiser CN, Ho KH, Chen B, Simmons AJ, Southard-Smith AN, David G, Jacobson DA, Kaverina I, Wright CVE, Lau KS, Gu G", "reference": { "type": "PubMed", "id": "32245798", "url": "https://pubmed.ncbi.nlm.nih.gov/32245798" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q62141-4", "protein_name": "Paired amphipathic helix protein Sin3b", "gene_name": "Sin3b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q62141", "url": "https://www.uniprot.org/uniprotkb/Q62141" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.32245798", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intestinal cell kinase (ICK) localizes to the crypt region and requires a dual phosphorylation site found in map kinases.", "journal": "J. Cell. Physiol.", "date": "2000", "authors": "Togawa K, Yan YX, Inomoto T, Slaugenhaupt S, Rustgi AK", "reference": { "type": "PubMed", "id": "10699974", "url": "https://pubmed.ncbi.nlm.nih.gov/10699974" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9JKV2-1", "protein_name": "Serine/threonine-protein kinase ICK", "gene_name": "Cilk1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UPZ9-1", "protein_name": "Serine/threonine-protein kinase ICK", "gene_name": "CILK1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9JKV2", "url": "https://www.uniprot.org/uniprotkb/Q9JKV2" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 157, "end_pos": 157, "sequence_org": "T", "sequence_mut": "A", "comment": "Reduction of activity and loss of autophosphorylation. 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Complete loss of kinase activity and of nuclear localization; when associated with A-271 and A-272.", "evidence": [ { "database": "UniProtKB", "id": "Q9JKV2", "url": "https://www.uniprot.org/uniprotkb/Q9JKV2" }, { "database": "PubMed", "id": "15988018", "url": "https://pubmed.ncbi.nlm.nih.gov/15988018" } ], "uniprot_canonical_ac": "Q9JKV2-1" }, { "start_pos": 271, "end_pos": 271, "sequence_org": "K", "sequence_mut": "A", "comment": "Partial loss of kinase activity. Complete loss of kinase activity and of nuclear localization; when associated with A-270 and A-272.", "evidence": [ { "database": "UniProtKB", "id": "Q9JKV2", "url": "https://www.uniprot.org/uniprotkb/Q9JKV2" }, { "database": "PubMed", "id": "15988018", "url": "https://pubmed.ncbi.nlm.nih.gov/15988018" } ], "uniprot_canonical_ac": "Q9JKV2-1" }, { "start_pos": 272, "end_pos": 272, "sequence_org": "R", "sequence_mut": "A", "comment": "Complete loss of kinase activity and of nuclear localization. Complete loss of kinase activity and of nuclear localization; when associated with A-270 and A-272.", "evidence": [ { "database": "UniProtKB", "id": "Q9JKV2", "url": "https://www.uniprot.org/uniprotkb/Q9JKV2" }, { "database": "PubMed", "id": "15988018", "url": "https://pubmed.ncbi.nlm.nih.gov/15988018" } ], "uniprot_canonical_ac": "Q9JKV2-1" }, { "start_pos": 33, "end_pos": 33, "sequence_org": "K", "sequence_mut": "R", "comment": "Loss of kinase activity; no effect on nuclear subcellular location.", "evidence": [ { "database": "UniProtKB", "id": "Q9JKV2", "url": "https://www.uniprot.org/uniprotkb/Q9JKV2" }, { "database": "PubMed", "id": "15988018", "url": "https://pubmed.ncbi.nlm.nih.gov/15988018" } ], "uniprot_canonical_ac": "Q9JKV2-1" } ], "phosphorylation": [ { "start_pos": 157, "end_pos": 157, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine; by CDK7", "evidence": [ { "database": "UniProtKB", "id": "Q9JKV2", "url": 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Gastroenterol.", "date": "2002", "authors": "Wang L, Kaneko S, Kagaya M, Ohno H, Honda M, Kobayashi K", "reference": { "type": "PubMed", "id": "12108679", "url": "https://pubmed.ncbi.nlm.nih.gov/12108679" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BMF4-1", "protein_name": "Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial", "gene_name": "Dlat", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BMF4", "url": "https://www.uniprot.org/uniprotkb/Q8BMF4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.12108679", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Grace Miranda, Lee Denis, Lei Joshua, DePamphilis Melanie, Buehler Darya, Hu Rong, Ward-Shaw Ella, Blaine-Sauer Simon, Lavoie Nathalie, White Elizabeth A, Munger Karl, Lambert Paul F", "reference": { "type": "PubMed", "id": "37036883", "url": "https://pubmed.ncbi.nlm.nih.gov/37036883" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q62130-1", "protein_name": "Tyrosine-protein phosphatase non-receptor type 14", "gene_name": "Ptpn14", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q62130", "url": "https://www.uniprot.org/uniprotkb/Q62130" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.37036883", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sertoli cell PUMILIO proteins modulate mouse testis size through translational control of cell cycle regulators.", "journal": "Biology of reproduction", "date": "2022", "authors": "Zhao T, Xiao T, Cao D, Xia W, Gao L, Cheng L, Zang M, Li X, Xu EY", "reference": { "type": "PubMed", "id": "35678316", "url": "https://pubmed.ncbi.nlm.nih.gov/35678316" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q80U78-1", "protein_name": "Pumilio homolog 1", "gene_name": "Pum1", "tax_name": 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and convergent extension during mouse gastrulation.", "journal": "Development (Cambridge, England)", "date": "2009-06", "authors": "Yen Wei Wei, Williams Margot, Periasamy Ammasi, Conaway Mark, Burdsal Carol, Keller Raymond, Lu Xiaowei, Sutherland Ann", "reference": { "type": "PubMed", "id": "19439496", "url": "https://pubmed.ncbi.nlm.nih.gov/19439496" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BKG3-1", "protein_name": "Inactive tyrosine-protein kinase 7", "gene_name": "Ptk7", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BKG3", "url": "https://www.uniprot.org/uniprotkb/Q8BKG3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.19439496", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Norris Dominic P, Dean Charlotte H, Henderson Deborah J, Murdoch Jennifer N", "reference": { "type": "PubMed", "id": "20704721", "url": "https://pubmed.ncbi.nlm.nih.gov/20704721" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BKG3-1", "protein_name": "Inactive tyrosine-protein kinase 7", "gene_name": "Ptk7", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BKG3", "url": "https://www.uniprot.org/uniprotkb/Q8BKG3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.20704721", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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