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Genet.", "date": "2017", "authors": "Braun DA, Rao J, Mollet G, Schapiro D, Daugeron MC, Tan W, Gribouval O, Boyer O, Revy P, Jobst-Schwan T, Schmidt JM, Lawson JA, Schanze D, Ashraf S, Ullmann JFP, Hoogstraten CA, Boddaert N, Collinet B, Martin G, Liger D, Lovric S, Furlano M, Guerrera IC, Sanchez-Ferras O, Hu JF, Boschat AC, Sanquer S, Menten B, Vergult S, De Rocker N, Airik M, Hermle T, Shril S, Widmeier E, Gee HY, Choi WI, Sadowski CE, Pabst WL, Warejko JK, Daga A, Basta T, Matejas V, Scharmann K, Kienast SD, Behnam B, Beeson B, Begtrup A, Bruce M, Ch'ng GS, Lin SP, Chang JH, Chen CH, Cho MT, Gaffney PM, Gipson PE, Hsu CH, Kari JA, Ke YY, Kiraly-Borri C, Lai WM, Lemyre E, Littlejohn RO, Masri A, Moghtaderi M, Nakamura K, Ozaltin F, Praet M, Prasad C, Prytula A, Roeder ER, Rump P, Schnur RE, Shiihara T, Sinha MD, Soliman NA, Soulami K, Sweetser DA, Tsai WH, Tsai JD, Topaloglu R, Vester U, Viskochil DH, Vatanavicharn N, Waxler JL, Wierenga KJ, Wolf MTF, Wong SN, Leidel SA, Truglio G, Dedon PC, Poduri A, Mane S, Lifton RP, Bouchard M, Kannu P, Chitayat D, Magen D, Callewaert B, van Tilbeurgh H, Zenker M, Antignac C, Hildebrandt F", "reference": { "type": "PubMed", "id": "28805828", "url": "https://pubmed.ncbi.nlm.nih.gov/28805828" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9CR70-1", "protein_name": "EKC/KEOPS complex subunit Lage3", "gene_name": "Lage3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "F1QZ15-1", "protein_name": "EKC/KEOPS complex subunit TPRKB", "gene_name": "tprkb", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q5RHZ6-1", "protein_name": "tRNA N6-adenosine threonylcarbamoyltransferase", "gene_name": "osgep", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q14657-1", "protein_name": "EKC/KEOPS complex subunit LAGE3", "gene_name": "LAGE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BWU5-1", "protein_name": "tRNA N6-adenosine threonylcarbamoyltransferase", "gene_name": "Osgep", 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Biol. Chem.", "date": "1990", "authors": "Granger BL, Green SA, Gabel CA, Howe CL, Mellman I, Helenius A", "reference": { "type": "PubMed", "id": "2142158", "url": "https://pubmed.ncbi.nlm.nih.gov/2142158" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P11438-1", "protein_name": "Lysosome-associated membrane glycoprotein 1", "gene_name": "Lamp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P17047-1", "protein_name": "Lysosome-associated membrane glycoprotein 2", "gene_name": "Lamp2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P17046-1", "protein_name": "Lysosome-associated membrane glycoprotein 2", "gene_name": "Lamp2", "tax_name": "Rat" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P11438", "url": "https://www.uniprot.org/uniprotkb/P11438" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.2142158", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The lysosomal polypeptide transporter TAPL is stabilized by interaction with LAMP-1 and LAMP-2.", "journal": "J. Cell Sci.", "date": "2012", "authors": "Demirel \u00d6zlem, Jan Irina, Wolters Dirk, Blanz Judith, Saftig Paul, Tamp\u00e9 Robert, Abele Rupert", "reference": { "type": "PubMed", "id": "22641697", "url": "https://pubmed.ncbi.nlm.nih.gov/22641697" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P11438-1", "protein_name": "Lysosome-associated membrane glycoprotein 1", "gene_name": "Lamp1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P17047-1", "protein_name": "Lysosome-associated membrane glycoprotein 2", "gene_name": "Lamp2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P11279-1", "protein_name": "Lysosome-associated membrane glycoprotein 1", "gene_name": "LAMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13473-1", "protein_name": "Lysosome-associated membrane glycoprotein 2", "gene_name": "LAMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP78-1", "protein_name": "ABC-type oligopeptide transporter ABCB9", "gene_name": "ABCB9", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P11438", "url": "https://www.uniprot.org/uniprotkb/P11438" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.22641697", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The disulfide structure of mouse lysosome-associated membrane protein 1.", "journal": "J. 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Mol. Biol.", "date": "2001", "authors": "Ramakrishnan B, Qasba PK", "reference": { "type": "PubMed", "id": "11419947", "url": "https://pubmed.ncbi.nlm.nih.gov/11419947" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P29752-1", "protein_name": "Alpha-lactalbumin", "gene_name": "Lalba", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P08037-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P11166-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 1", "gene_name": "SLC2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00709-1", "protein_name": "Alpha-lactalbumin", "gene_name": "LALBA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15291-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P29752", "url": "https://www.uniprot.org/uniprotkb/P29752" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11419947", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Alpha-lactalbumin (LA) stimulates milk beta-1,4-galactosyltransferase I (beta 4Gal-T1) to transfer glucose from UDP-glucose to N-acetylglucosamine. 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Mol. Biol.", "date": "2003", "authors": "Ramasamy V, Ramakrishnan B, Boeggeman E, Qasba PK", "reference": { "type": "PubMed", "id": "12927542", "url": "https://pubmed.ncbi.nlm.nih.gov/12927542" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P29752-1", "protein_name": "Alpha-lactalbumin", "gene_name": "Lalba", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P08037-1", "protein_name": "Beta-1,4-galactosyltransferase 1", "gene_name": "B4GALT1", "tax_name": "Bovine" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P29752", "url": "https://www.uniprot.org/uniprotkb/P29752" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 314, "end_pos": 314, "sequence_org": "W", "sequence_mut": "A", "comment": "Reduces galactosyltransferase activity, lactose synthase activity and substrate binding by 99%.", "evidence": [ { "database": 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Chem.", "date": "2005", "authors": "Mizuhara E, Nakatani T, Minaki Y, Sakamoto Y, Ono Y", "reference": { "type": "PubMed", "id": "15528197", "url": "https://pubmed.ncbi.nlm.nih.gov/15528197" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P52955-1", "protein_name": "Transcription factor LBX1", "gene_name": "Lbx1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BX46-1", "protein_name": "SKI family transcriptional corepressor 1", "gene_name": "Skor1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P52955", "url": "https://www.uniprot.org/uniprotkb/P52955" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15528197", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { 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alpha 5, and widespread expression in adult mouse tissues.", "journal": "J. Biol. Chem.", "date": "1995", "authors": "Miner JH, Lewis RM, Sanes JR", "reference": { "type": "PubMed", "id": "7499364", "url": "https://pubmed.ncbi.nlm.nih.gov/7499364" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61001-1", "protein_name": "Laminin subunit alpha-5", "gene_name": "Lama5", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61001", "url": "https://www.uniprot.org/uniprotkb/Q61001" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7499364", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { 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Chem.", "date": "1995", "authors": "Galliano M F, Aberdam D, Aguzzi A, Ortonne J P, Meneguzzi G", "reference": { "type": "PubMed", "id": "7665604", "url": "https://pubmed.ncbi.nlm.nih.gov/7665604" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61789-1", "protein_name": "Laminin subunit alpha-3", "gene_name": "Lama3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61789", "url": "https://www.uniprot.org/uniprotkb/Q61789" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7665604", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Assignment of mouse nicein genes to chromosomes 1 and 18.", "journal": "Mamm. Genome", "date": "1994", "authors": "Aberdam D, Galliano MF, Mattei MG, Pisani-Spadafora A, Ortonne JP, Meneguzzi G", "reference": { "type": "PubMed", "id": "8012114", "url": "https://pubmed.ncbi.nlm.nih.gov/8012114" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61789-1", "protein_name": "Laminin subunit alpha-3", "gene_name": "Lama3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61789", "url": "https://www.uniprot.org/uniprotkb/Q61789" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8012114", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Sequence and expression of murine type I hair keratins mHa2 and mHa3.", "journal": "Exp. Cell Res.", "date": "1994", "authors": "Winter H, Siry P, Tobiasch E, Schweizer J", "reference": { "type": "PubMed", "id": "7514534", "url": "https://pubmed.ncbi.nlm.nih.gov/7514534" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61897-1", "protein_name": "Keratin, type I cuticular Ha3-II", "gene_name": "Krt33b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62168-1", "protein_name": "Keratin, type I cuticular Ha2", "gene_name": "Krt32", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61897", "url": "https://www.uniprot.org/uniprotkb/Q61897" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7514534", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Serine-rich ultra high sulfur protein gene expression in murine hair and skin during the hair cycle.", "journal": "J. Biol. Chem.", "date": "1990", "authors": "Wood L, Mills M, Hatzenbuhler N, Vogeli G", "reference": { "type": "PubMed", "id": "2250030", "url": "https://pubmed.ncbi.nlm.nih.gov/2250030" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q62220-1", "protein_name": "Keratin-associated protein 5-4", "gene_name": "Krtap5-4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q64507-1", "protein_name": "Keratin-associated protein 5-1", "gene_name": "Krtap5-1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q62220", "url": "https://www.uniprot.org/uniprotkb/Q62220" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.2250030", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q8K1H9-1", "protein_name": "Odorant-binding protein 2a", "gene_name": "Obp2a", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q6JVL5", "url": "https://www.uniprot.org/uniprotkb/Q6JVL5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15363845", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The LRIG gene family has three vertebrate paralogs widely expressed in human and mouse tissues and a homolog in Ascidiacea.", "journal": "Genomics", "date": "2004", "authors": "Guo Dongsheng, Holmlund Camilla, Henriksson Roger, Hedman H\u00e5kan", "reference": { "type": "PubMed", "id": "15203213", "url": "https://pubmed.ncbi.nlm.nih.gov/15203213" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6P1C6-1", "protein_name": "Leucine-rich repeats and immunoglobulin-like domains protein 3", "gene_name": "Lrig3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6UXM1-1", "protein_name": "Leucine-rich repeats and immunoglobulin-like domains protein 3", "gene_name": "LRIG3", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 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protein synthesis in mouse pancreas at the translational level without increase in mRNA.", "journal": "Am. 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Physiol.", "date": "2004", "authors": "Sans Maria Dolors, Lee Sae-Hong, D'Alecy Louis G, Williams John A", "reference": { "type": "PubMed", "id": "15117679", "url": "https://pubmed.ncbi.nlm.nih.gov/15117679" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6P8U6-1", "protein_name": "Pancreatic triacylglycerol lipase", "gene_name": "Pnlip", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q6P8U6", "url": "https://www.uniprot.org/uniprotkb/Q6P8U6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.15117679", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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Chen J, Fan Y, Peng T, Sadayappan S, Wang Y, Fan GC", "reference": { "type": "PubMed", "id": "35757735", "url": "https://pubmed.ncbi.nlm.nih.gov/35757735" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q810Z1-1", "protein_name": "Epididymal-specific lipocalin-10", "gene_name": "Lcn10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6JVE6-1", "protein_name": "Epididymal-specific lipocalin-10", "gene_name": "LCN10", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q810Z1", "url": "https://www.uniprot.org/uniprotkb/Q810Z1" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.35757735", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structural insights into modulation and selectivity of transsynaptic neurexin-LRRTM interaction.", "journal": "Nature communications", "date": "2018", "authors": "Yamagata A, Goto-Ito S, Sato Y, Shiroshima T, Maeda A, Watanabe M, Saitoh T, Maenaka K, Terada T, Yoshida T, Uemura T, Fukai S", "reference": { "type": "PubMed", "id": "30262834", "url": "https://pubmed.ncbi.nlm.nih.gov/30262834" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BGA3-1", "protein_name": "Leucine-rich repeat transmembrane neuronal protein 2", "gene_name": "Lrrtm2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O43300-1", "protein_name": "Leucine-rich repeat transmembrane neuronal protein 2", "gene_name": "LRRTM2", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", 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LRRTM2 in developing and mature hippocampal circuits.", "journal": "eLife", "date": "2022", "authors": "Dhume SH, Connor SA, Mills F, Tari PK, Au-Yeung SHM, Karimi B, Oku S, Roppongi RT, Kawabe H, Bamji SX, Wang YT, Brose N, Jackson MF, Craig AM, Siddiqui TJ", "reference": { "type": "PubMed", "id": "35662394", "url": "https://pubmed.ncbi.nlm.nih.gov/35662394" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BGA3-1", "protein_name": "Leucine-rich repeat transmembrane neuronal protein 2", "gene_name": "Lrrtm2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K377-1", "protein_name": "Leucine-rich repeat transmembrane neuronal protein 1", "gene_name": "Lrrtm1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BGA3", "url": "https://www.uniprot.org/uniprotkb/Q8BGA3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "RBPJ/CBF1 interacts with L3MBTL3/MBT1 to promote repression of Notch signaling via histone demethylase KDM1A/LSD1.", "journal": "EMBO J.", "date": "2017", "authors": "Xu T, Park SS, Giaimo BD, Hall D, Ferrante F, Ho DM, Hori K, Anhezini L, Ertl I, Bartkuhn M, Zhang H, Milon E, Ha K, Conlon KP, Kuick R, Govindarajoo B, Zhang Y, Sun Y, Dou Y, Basrur V, Elenitoba-Johnson KS, Nesvizhskii AI, Ceron J, Lee CY, Borggrefe T, Kovall RA, Rual JF", "reference": { "type": "PubMed", "id": "29030483", "url": 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"sequence_mut": "E", "comment": "No effect on interaction with L3MBTL3.", "evidence": [ { "database": "UniProtKB", "id": "P31266", "url": "https://www.uniprot.org/uniprotkb/P31266" }, { "database": "PubMed", "id": "29030483", "url": "https://pubmed.ncbi.nlm.nih.gov/29030483" } ], "uniprot_canonical_ac": "P31266-1" }, { "start_pos": 425, "end_pos": 425, "sequence_org": "E", "sequence_mut": "R", "comment": "No effect on interaction with L3MBTL3.", "evidence": [ { "database": "UniProtKB", "id": "P31266", "url": "https://www.uniprot.org/uniprotkb/P31266" }, { "database": "PubMed", "id": "29030483", "url": "https://pubmed.ncbi.nlm.nih.gov/29030483" } ], "uniprot_canonical_ac": "P31266-1" } ], "record_id": "pubmed.29030483", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Methylated DNMT1 and E2F1 are targeted for proteolysis by L3MBTL3 and CRL4(DCAF5) ubiquitin ligase.", "journal": "Nature communications", "date": "2018", "authors": "Leng F, Yu J, Zhang C, Alejo S, Hoang N, Sun H, Lu F, Zhang H", "reference": { "type": "PubMed", "id": "29691401", "url": "https://pubmed.ncbi.nlm.nih.gov/29691401" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BLB7-1", "protein_name": "Lethal(3)malignant brain tumor-like protein 3", "gene_name": "L3mbtl3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P26358-1", "protein_name": "DNA (cytosine-5)-methyltransferase 1", "gene_name": "DNMT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01094-1", "protein_name": "Transcription factor E2F1", "gene_name": "E2F1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q80T85-1", "protein_name": "DDB1- and CUL4-associated factor 5", "gene_name": "Dcaf5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96JM7-1", "protein_name": "Lethal(3)malignant brain tumor-like protein 3", "gene_name": "L3MBTL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60341-1", "protein_name": "Lysine-specific histone demethylase 1A", "gene_name": "KDM1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JK2-1", "protein_name": "DDB1- and CUL4-associated factor 5", "gene_name": "DCAF5", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BLB7", "url": "https://www.uniprot.org/uniprotkb/Q8BLB7" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 142, "end_pos": 142, "sequence_org": "K", "sequence_mut": "A", "comment": "Loss of interaction with L3MBTL3 and DCAF5. Loss of ubiquitination by the CRL4-DCAF5 E3 ubiquitin ligase complex.", "evidence": [ { "database": "UniProtKB", "id": "P26358", "url": "https://www.uniprot.org/uniprotkb/P26358" }, { "database": "PubMed", "id": "29691401", "url": "https://pubmed.ncbi.nlm.nih.gov/29691401" } ], "uniprot_canonical_ac": "P26358-1" }, { "start_pos": 185, "end_pos": 185, "sequence_org": "K", "sequence_mut": "R", "comment": "Abrogates methylation by SETD7. Loss of interaction with L3MBTL3. 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"count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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Loss of ubiquitination by the CRL4-DCAF5 E3 ubiquitin ligase complex. 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the kidney induces TRAF2/6-mediated signals to prevent infection by uropathogenic bacteria.", "journal": "Nature communications", "date": "2014", "authors": "Su X, Min S, Cao S, Yan H, Zhao Y, Li H, Chai L, Mei S, Yang J, Zhang Y, Zhang Z, Liu F, Sun W, Che Y, Yang R", "reference": { "type": "PubMed", "id": "25026888", "url": "https://pubmed.ncbi.nlm.nih.gov/25026888" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BZT5-1", "protein_name": "Leucine-rich repeat-containing protein 19", "gene_name": "Lrrc19", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9Y4K3-1", "protein_name": "TNF receptor-associated factor 6", "gene_name": "TRAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P39429-1", "protein_name": "TNF receptor-associated factor 2", "gene_name": "Traf2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P70196-1", "protein_name": "TNF receptor-associated factor 6", "gene_name": "Traf6", "tax_name": "Mouse" }, { "uniprot_canonical_ac": 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healing in pressure ulcers in mice.", "journal": "Organogenesis", "date": "2018", "authors": "Sun J, Wang Z, Wang X", "reference": { "type": "PubMed", "id": "29461900", "url": "https://pubmed.ncbi.nlm.nih.gov/29461900" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BZT5-1", "protein_name": "Leucine-rich repeat-containing protein 19", "gene_name": "Lrrc19", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BZT5", "url": "https://www.uniprot.org/uniprotkb/Q8BZT5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.29461900", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "LRRC19 Promotes Permeability of the Gut Epithelial Barrier Through Degrading PKC-zeta and PKCiota/lambda to Reduce Expression of ZO1, ZO3, and Occludin.", "journal": "Inflammatory bowel diseases", "date": "2021", "authors": "Su X, Wei J, Qi H, Jin M, Zhang Q, Zhang Y, Zhang C, Yang R", "reference": { "type": "PubMed", "id": "33501933", "url": "https://pubmed.ncbi.nlm.nih.gov/33501933" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BZT5-1", "protein_name": "Leucine-rich 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Desulfovibrio vulgaris interacts with novel gut epithelial immune receptor LRRC19 and exacerbates colitis.", "journal": "Microbiome", "date": "2024-01-03", "authors": "Xie Runxiang, Gu Yu, Li Mengfan, Li Lingfeng, Yang Yunwei, Sun Yue, Zhou Bingqian, Liu Tianyu, Wang Sinan, Liu Wentian, Yang Rongcun, Su Xiaomin, Zhong Weilong, Wang Bangmao, Cao Hailong", "reference": { "type": "PubMed", "id": "38172943", "url": "https://pubmed.ncbi.nlm.nih.gov/38172943" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BZT5-1", "protein_name": "Leucine-rich repeat-containing protein 19", "gene_name": "Lrrc19", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BZT5", "url": "https://www.uniprot.org/uniprotkb/Q8BZT5" } ], "common_name": "Mouse", 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