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Commun.", "date": "2007", "authors": "Zheng Gang, Ning Jinying, Yang Yu-Chung", "reference": { "type": "PubMed", "id": "17950244", "url": "https://pubmed.ncbi.nlm.nih.gov/17950244" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96PM5-1", "protein_name": "RING finger and CHY zinc finger domain-containing protein 1", "gene_name": "RCHY1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96PM5", "url": "https://www.uniprot.org/uniprotkb/Q96PM5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17950244", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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T, Carmi R, Haider NB, Searby CC, Shastri M, Beck G, Wright AF, Iannaccone A, Elbedour K, Riise R, Baldi A, Raas-Rothschild A, Gorman SW, Duhl DM, Jacobson SG, Casavant T, Stone EM, Sheffield VC", "reference": { "type": "PubMed", "id": "11381270", "url": "https://pubmed.ncbi.nlm.nih.gov/11381270" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96RK4-1", "protein_name": "BBSome complex member BBS4", "gene_name": "BBS4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96RK4", "url": "https://www.uniprot.org/uniprotkb/Q96RK4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11381270", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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analysis: a rapid and sensitive mutation screening technique.", "journal": "Human mutation", "date": "2003", "authors": "Hoskins BE, Thorn A, Scambler PJ, Beales PL", "reference": { "type": "PubMed", "id": "12872256", "url": "https://pubmed.ncbi.nlm.nih.gov/12872256" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q96RK4-1", "protein_name": "BBSome complex member BBS4", "gene_name": "BBS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXC9-1", "protein_name": "BBSome complex member BBS2", "gene_name": "BBS2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q96RK4", "url": "https://www.uniprot.org/uniprotkb/Q96RK4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12872256", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ 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functional studies of the intracellular tyrosine kinase MATK gene and its translated product.", "journal": "J. Biol. Chem.", "date": "1995", "authors": "Avraham S, Jiang S, Ota S, Fu Y, Deng B, Dowler LL, White RA, Avraham H", "reference": { "type": "PubMed", "id": "7530249", "url": "https://pubmed.ncbi.nlm.nih.gov/7530249" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42679-1", "protein_name": "Megakaryocyte-associated tyrosine-protein kinase", "gene_name": "MATK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12931-1", "protein_name": "Proto-oncogene tyrosine-protein kinase Src", "gene_name": "SRC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P42679", "url": "https://www.uniprot.org/uniprotkb/P42679" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 530, "end_pos": 530, "kinase_uniprot_canonical_ac": "P42679-1", "kinase_gene_name": "MATK", "residue": "Tyr", "comment": "", "evidence": [ { 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tyrosine kinase, HYL (hematopoietic consensus tyrosine-lacking kinase).", "journal": "Oncogene", "date": "1994", "authors": "Sakano S, Iwama A, Inazawa J, Ariyama T, Ohno M, Suda T", "reference": { "type": "PubMed", "id": "8134117", "url": "https://pubmed.ncbi.nlm.nih.gov/8134117" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42679-1", "protein_name": "Megakaryocyte-associated tyrosine-protein kinase", "gene_name": "MATK", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P42679", "url": "https://www.uniprot.org/uniprotkb/P42679" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8134117", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Res.", "date": "1987", "authors": "Agarwal D P, Goedde H W", "reference": { "type": "PubMed", "id": "3610592", "url": "https://pubmed.ncbi.nlm.nih.gov/3610592" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P05091-1", "protein_name": "Aldehyde dehydrogenase, mitochondrial", "gene_name": "ALDH2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P05091", "url": "https://www.uniprot.org/uniprotkb/P05091" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3610592", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mitochondrial aldehyde dehydrogenase. 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Detection of a new site of methylation at isomerized L-aspartyl residues.", "journal": "The Journal of biological chemistry", "date": "1984-09-10", "authors": "Murray E D, Clarke S", "reference": { "type": "PubMed", "id": "6469980", "url": "https://pubmed.ncbi.nlm.nih.gov/6469980" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P22061-1", "protein_name": "Protein-L-isoaspartate(D-aspartate) O-methyltransferase", "gene_name": "PCMT1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P22061", "url": "https://www.uniprot.org/uniprotkb/P22061" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.6469980", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Amino acid polymorphisms of the human L-isoaspartyl/D-aspartyl methyltransferase involved in protein repair.", "journal": "Biochem. Biophys. Res. 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gene for human aromatic L-amino acid decarboxylase (DDC) to chromosome 7p13-->p11 by in situ hybridisation.", "journal": "Cytogenet. Cell Genet.", "date": "1992", "authors": "Craig S P, Thai A L, Weber M, Craig I W", "reference": { "type": "PubMed", "id": "1395716", "url": "https://pubmed.ncbi.nlm.nih.gov/1395716" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20711-1", "protein_name": "Aromatic-L-amino-acid decarboxylase", "gene_name": "DDC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20711", "url": "https://www.uniprot.org/uniprotkb/P20711" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1395716", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Aromatic L-amino acid decarboxylase deficiency: clinical features, treatment, and prognosis.", "journal": "Neurology", "date": "2004", "authors": "Pons R, Ford B, Chiriboga CA, Clayton PT, Hinton V, Hyland K, Sharma R, De Vivo DC", "reference": { "type": "PubMed", "id": "15079002", "url": "https://pubmed.ncbi.nlm.nih.gov/15079002" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20711-1", "protein_name": "Aromatic-L-amino-acid decarboxylase", "gene_name": "DDC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20711", "url": "https://www.uniprot.org/uniprotkb/P20711" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15079002", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and characterization of a novel form of the human L-dopa decarboxylase mRNA.", "journal": "Neurochem. 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[] } ] }, { "title": "Open conformation of human DOPA decarboxylase reveals the mechanism of PLP addition to Group II decarboxylases.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2011", "authors": "Giardina G, Montioli R, Gianni S, Cellini B, Paiardini A, Voltattorni CB, Cutruzzola F", "reference": { "type": "PubMed", "id": "22143761", "url": "https://pubmed.ncbi.nlm.nih.gov/22143761" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P20711-1", "protein_name": "Aromatic-L-amino-acid decarboxylase", "gene_name": "DDC", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P20711", "url": "https://www.uniprot.org/uniprotkb/P20711" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22143761", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The APC/C E3 ligase subunit ANAPC11 mediates FOXO3 protein degradation to promote cell proliferation and lymph node metastasis in urothelial bladder cancer.", "journal": "Cell death & disease", "date": "2023-08-12", "authors": "Yan Dong, He Qingqing, Pei Lu, Yang Meihua, Huang Lifang, Kong Jianqiu, He Wang, Liu Hao, Xu Shizhong, Qin Haide, Lin Tianxin, Huang Jian", "reference": { "type": "PubMed", "id": "37573356", "url": "https://pubmed.ncbi.nlm.nih.gov/37573356" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NYG5-1", "protein_name": "Anaphase-promoting complex subunit 11", "gene_name": "ANAPC11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NYG5", "url": "https://www.uniprot.org/uniprotkb/Q9NYG5" } ], 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex.", "journal": "Proteins", "date": "2013", "authors": "Kim KR, Park SH, Kim HS, Rhee KH, Kim BG, Kim DG, Park MS, Kim HJ, Kim S, Han BW", "reference": { "type": "PubMed", "id": "23609930", "url": "https://pubmed.ncbi.nlm.nih.gov/23609930" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P14868-1", "protein_name": "Aspartate--tRNA ligase, cytoplasmic", "gene_name": "DARS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78539-1", "protein_name": "Sushi repeat-containing protein SRPX", "gene_name": "SRPX", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P14868", "url": "https://www.uniprot.org/uniprotkb/P14868" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "phosphorylation": [ { "start_pos": 239, "end_pos": 239, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Tyr", "comment": "", "evidence": [ { 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