[ { "title": "Adenosine triphosphate binding cassette (ABC) transporters are expressed and regulated during terminal keratinocyte differentiation: a potential role for ABCA7 in epidermal lipid reorganization.", "journal": "The Journal of investigative dermatology", "date": "2003-09", "authors": "Kielar Danuta, Kaminski Wolfgang E, Liebisch Gerhard, Piehler Armin, Wenzel J\u00fcrgen J, M\u00f6hle Christoph, Heimerl Susanne, Langmann Thomas, Friedrich Sven O, B\u00f6ttcher Alfred, Barlage Stefan, Drobnik Wolfgang, Schmitz Gerd", "reference": { "type": "PubMed", "id": "12925201", "url": "https://pubmed.ncbi.nlm.nih.gov/12925201" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IZY2-1", "protein_name": "Phospholipid-transporting ATPase ABCA7", "gene_name": "ABCA7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IZY2", "url": "https://www.uniprot.org/uniprotkb/Q8IZY2" } ], 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ABCA4 and disease-causing mutants.", "journal": "The Journal of biological chemistry", "date": "2013", "authors": "Quazi F, Molday RS", "reference": { "type": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IZY2-1", "protein_name": "Phospholipid-transporting ATPase ABCA7", "gene_name": "ABCA7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95477-1", "protein_name": "Phospholipid-transporting ATPase ABCA1", "gene_name": "ABCA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78363-1", "protein_name": "Retinal-specific phospholipid-transporting ATPase ABCA4", "gene_name": "ABCA4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IZY2", "url": "https://www.uniprot.org/uniprotkb/Q8IZY2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 100, "end_pos": 100, "sequence_org": "S", "sequence_mut": "C", "comment": "Highly decreased protein abundance. Highly decreased ATPase activity. Highly decreased phospholipid translocase activity.", "evidence": [ { "database": "UniProtKB", "id": "O95477", "url": "https://www.uniprot.org/uniprotkb/O95477" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" } ], "uniprot_canonical_ac": "O95477-1" }, { "start_pos": 1512, "end_pos": 1512, "sequence_org": "T", "sequence_mut": "M", "comment": "Moderately decreased protein abundance. Does not affect ATPase activity. Moderately decreased phospholipid translocase activity.", "evidence": [ { "database": "UniProtKB", "id": "O95477", "url": "https://www.uniprot.org/uniprotkb/O95477" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" } ], "uniprot_canonical_ac": "O95477-1" }, { "start_pos": 1952, "end_pos": 1952, "sequence_org": "K", "sequence_mut": "M", "comment": "Inhibits ATPase activity; when associated with M-939. Decreases translocase activity; when associated with M-939. Does not affect protein subcellular localization in plasma membrane and endosome; when associated with M-939.", "evidence": [ { "database": "UniProtKB", "id": "O95477", "url": "https://www.uniprot.org/uniprotkb/O95477" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" } ], "uniprot_canonical_ac": "O95477-1" }, { "start_pos": 593, "end_pos": 593, "sequence_org": "F", "sequence_mut": "L", "comment": "Moderately decreased protein abundance. Highly decreased ATPase activity. Highly decreased phospholipid translocase activity.", "evidence": [ { "database": "UniProtKB", "id": "O95477", "url": "https://www.uniprot.org/uniprotkb/O95477" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" } ], "uniprot_canonical_ac": "O95477-1" }, { "start_pos": 939, "end_pos": 939, "sequence_org": "K", "sequence_mut": "M", "comment": "Inhibits ATPase activity; when associated with M-1952. Decreases translocase activity; when associated with M-1952. Does not affect protein subcellular localization in plasma membrane and endosome; when associated with M-1952.", "evidence": [ { "database": "UniProtKB", "id": "O95477", "url": "https://www.uniprot.org/uniprotkb/O95477" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" } ], "uniprot_canonical_ac": "O95477-1" }, { "start_pos": 1502, "end_pos": 1502, "sequence_org": "C", "sequence_mut": "R", "comment": "Moderately decreased protein abundance. Moderately decreased ATPase activity. Moderately decreased phospholipid translocase activity.", "evidence": [ { "database": "UniProtKB", "id": "P78363", "url": "https://www.uniprot.org/uniprotkb/P78363" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" } ], "uniprot_canonical_ac": "P78363-1" }, { "start_pos": 1978, "end_pos": 1978, "sequence_org": "K", "sequence_mut": "M", "comment": "Inhibits ATPase activity; when associated with M-969. Decreases translocase activity; when associated with M-969. Does not affect protein subcellular localization in endoplasmic reticulum; when associated with M-969. Loss of ATP-dependent all-trans-retinal transport; when associated with M-1978. Loss in N-retinylidene-PE transfer activity. Inhibits ATPase activity with increasing retinal concentration. Does not affect ATP-independent N-retinylidene-PE binding. Does not affect ATP-dependent of N-retinylidene-PE release. Significantly reduces PE flippase activity. Inhibition of retinal-stimulated ATP hydrolysis.", "evidence": [ { "database": "UniProtKB", "id": "P78363", "url": "https://www.uniprot.org/uniprotkb/P78363" }, { "database": "PubMed", "id": "11017087", "url": "https://pubmed.ncbi.nlm.nih.gov/11017087" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" }, { "database": "PubMed", "id": "22735453", "url": "https://pubmed.ncbi.nlm.nih.gov/22735453" } ], "uniprot_canonical_ac": "P78363-1" }, { "start_pos": 2107, "end_pos": 2107, "sequence_org": "R", "sequence_mut": "P", "comment": "Highly decreased protein abundance. Highly decreased ATPase activity. Highly decreased phospholipid translocase activity.", "evidence": [ { "database": "UniProtKB", "id": "P78363", "url": "https://www.uniprot.org/uniprotkb/P78363" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" } ], "uniprot_canonical_ac": "P78363-1" }, { "start_pos": 2180, "end_pos": 2180, "sequence_org": "P", "sequence_mut": "L", "comment": "Does not affect protein abundance. Does not affect ATPase activity. Moderately decreased phospholipid translocase activity.", "evidence": [ { "database": "UniProtKB", "id": "P78363", "url": "https://www.uniprot.org/uniprotkb/P78363" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" } ], "uniprot_canonical_ac": "P78363-1" }, { "start_pos": 969, "end_pos": 969, "sequence_org": "K", "sequence_mut": "M", "comment": "Inhibits ATPase activity; when associated with M-1978. Decreases translocase activity; when associated with M-1978. Does not affect protein subcellular localization in endoplasmic reticulum; when associated with M-1978. Loss of ATP-dependent all-trans-retinal transport; when associated with M-1978. Loss in N-retinylidene-PE transfer activity. Inhibits ATPase activity with increasing retinal concentration. Does not affect N-retinylidene-PE binding. Impairs ATP-dependent release of N-retinylidene-PE. Significantly reduces PE flippase activity.", "evidence": [ { "database": "UniProtKB", "id": "P78363", "url": "https://www.uniprot.org/uniprotkb/P78363" }, { "database": "PubMed", "id": "24097981", "url": "https://pubmed.ncbi.nlm.nih.gov/24097981" }, { "database": "PubMed", "id": "22735453", "url": "https://pubmed.ncbi.nlm.nih.gov/22735453" } ], "uniprot_canonical_ac": "P78363-1" } ], "record_id": "pubmed.24097981", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Loss-of-function variants in ABCA7 confer risk of Alzheimer's disease.", "journal": "Nat. Genet.", "date": "2015", "authors": "Steinberg Stacy, Stefansson Hreinn, Jonsson Thorlakur, Johannsdottir Hrefna, Ingason Andres, Helgason Hannes, Sulem Patrick, Magnusson Olafur Th, Gudjonsson Sigurjon A, Unnsteinsdottir Unnur, Kong Augustine, Helisalmi Seppo, Soininen Hilkka, Lah James J, , Aarsland Dag, Fladby Tormod, Ulstein Ingun D, Djurovic Srdjan, Sando Sigrid B, White Linda R, Knudsen Gun-Peggy, Westlye Lars T, Selb\u00e6k Geir, Giegling Ina, Hampel Harald, Hiltunen Mikko, Levey Allan I, Andreassen Ole A, Rujescu Dan, Jonsson Palmi V, Bjornsson Sigurbjorn, Snaedal Jon, Stefansson Kari", "reference": { "type": "PubMed", "id": "25807283", "url": "https://pubmed.ncbi.nlm.nih.gov/25807283" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IZY2-1", "protein_name": "Phospholipid-transporting ATPase ABCA7", "gene_name": "ABCA7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": 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} ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Alzheimer's disease patients: a targeted resequencing study.", "journal": "Lancet Neurol.", "date": "2015", "authors": "Cuyvers Elise, De Roeck Arne, Van den Bossche Tobi, Van Cauwenberghe Caroline, Bettens Karolien, Vermeulen Steven, Mattheijssens Maria, Peeters Karin, Engelborghs Sebastiaan, Vandenbulcke Mathieu, Vandenberghe Rik, De Deyn Peter P, Van Broeckhoven Christine, Sleegers Kristel", "reference": { "type": "PubMed", "id": "26141617", "url": "https://pubmed.ncbi.nlm.nih.gov/26141617" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IZY2-1", "protein_name": "Phospholipid-transporting ATPase ABCA7", "gene_name": "ABCA7", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IZY2", "url": "https://www.uniprot.org/uniprotkb/Q8IZY2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26141617", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": 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Cell", "date": "2003", "authors": "Stopak Kim, de Noronha Carlos, Yonemoto Wes, Greene Warner C", "reference": { "type": "PubMed", "id": "14527406", "url": "https://pubmed.ncbi.nlm.nih.gov/14527406" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14527406", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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retrovirus.", "journal": "Trends Mol. Med.", "date": "2003", "authors": "Vartanian Jean-Pierre, Sommer Peter, Wain-Hobson Simon", "reference": { "type": "PubMed", "id": "14557052", "url": "https://pubmed.ncbi.nlm.nih.gov/14557052" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14557052", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "HIV-1 Vif: counteracting innate antiretroviral defenses.", "journal": "Mol. Ther.", "date": "2003", "authors": "Cullen Bryan R", "reference": { "type": "PubMed", "id": "14565218", "url": "https://pubmed.ncbi.nlm.nih.gov/14565218" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14565218", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ 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Bleiber G, Duggal P, Nelson G, May M, Mangeat B, Alobwede I, Trono D, Vlahov D, Donfield S, Goedert JJ, Phair J, Buchbinder S, O'Brien SJ, Telenti A, Winkler CA", "reference": { "type": "PubMed", "id": "15452227", "url": "https://pubmed.ncbi.nlm.nih.gov/15452227" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15452227", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Sci.", "date": "2009", "authors": "Chiu Ya-Lin, Greene Warner C", "reference": { "type": "PubMed", "id": "19008196", "url": "https://pubmed.ncbi.nlm.nih.gov/19008196" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19008196", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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agent in defense.", "journal": "Trends Biochem. Sci.", "date": "2011", "authors": "Smith Harold C", "reference": { "type": "PubMed", "id": "21239176", "url": "https://pubmed.ncbi.nlm.nih.gov/21239176" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21239176", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { 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[] } ] }, { "title": "First-in-class small molecule inhibitors of the single-strand DNA cytosine deaminase APOBEC3G.", "journal": "ACS Chem. Biol.", "date": "2012", "authors": "Li Ming, Shandilya Shivender M D, Carpenter Michael A, Rathore Anurag, Brown William L, Perkins Angela L, Harki Daniel A, Solberg Jonathan, Hook Derek J, Pandey Krishan K, Parniak Michael A, Johnson Jeffrey R, Krogan Nevan J, Somasundaran Mohan, Ali Akbar, Schiffer Celia A, Harris Reuben S", "reference": { "type": "PubMed", "id": "22181350", "url": "https://pubmed.ncbi.nlm.nih.gov/22181350" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22181350", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The cellular antiviral protein APOBEC3G interacts with HIV-1 reverse transcriptase and inhibits its function during viral replication.", "journal": "J. Virol.", "date": "2012", "authors": "Wang Xiaoxia, Ao Zhujun, Chen Liyu, Kobinger Gary, Peng Jinyu, Yao Xiaojian", "reference": { "type": "PubMed", "id": "22301159", "url": "https://pubmed.ncbi.nlm.nih.gov/22301159" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22301159", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22546055", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Microbiol.", "date": "2012", "authors": "Imahashi Mayumi, Nakashima Masaaki, Iwatani Yasumasa", "reference": { "type": "PubMed", "id": "22787460", "url": "https://pubmed.ncbi.nlm.nih.gov/22787460" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HC16-1", "protein_name": "DNA dC->dU-editing enzyme APOBEC-3G", "gene_name": "APOBEC3G", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HC16", "url": "https://www.uniprot.org/uniprotkb/Q9HC16" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22787460", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"Novel bi-allelic variants in ACTL7A are associated with male infertility and total fertilization failure.", "journal": "Human reproduction (Oxford, England)", "date": "2021-11-18", "authors": "Wang Jing, Zhang Jintao, Sun Xueping, Lin Yuting, Cai Lingbo, Cui Yugui, Liu Jiayin, Liu Mingxi, Yang Xiaoyu", "reference": { "type": "PubMed", "id": "34727571", "url": "https://pubmed.ncbi.nlm.nih.gov/34727571" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y615-1", "protein_name": "Actin-like protein 7A", "gene_name": "ACTL7A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y615", "url": "https://www.uniprot.org/uniprotkb/Q9Y615" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34727571", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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[] } ] }, { "title": "Argonaute 2/RISC resides in sites of mammalian mRNA decay known as cytoplasmic bodies.", "journal": "Nat. Cell Biol.", "date": "2005", "authors": "Sen George L, Blau Helen M", "reference": { "type": "PubMed", "id": "15908945", "url": "https://pubmed.ncbi.nlm.nih.gov/15908945" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NDV7-1", "protein_name": "Trinucleotide repeat-containing gene 6A protein", "gene_name": "TNRC6A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15908945", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AU-rich-element-mediated upregulation of translation by FXR1 and Argonaute 2.", "journal": "Cell", "date": "2007-03-23", "authors": "Vasudevan Shobha, Steitz Joan A", "reference": { "type": "PubMed", "id": "17382880", "url": "https://pubmed.ncbi.nlm.nih.gov/17382880" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51114-1", "protein_name": "RNA-binding protein FXR1", "gene_name": "FXR1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17382880", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An mRNA m7G cap binding-like motif within human Ago2 represses translation.", "journal": "Cell", "date": "2007", "authors": "Kiriakidou M, Tan GS, Lamprinaki S, De Planell-Saguer M, Nelson PT, Mourelatos Z", "reference": { "type": "PubMed", "id": "17524464", "url": "https://pubmed.ncbi.nlm.nih.gov/17524464" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UKV8-1", "protein_name": "Protein argonaute-2", "gene_name": "AGO2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 470, "end_pos": 470, "sequence_org": "F", "sequence_mut": "V", "comment": "No effect on miRNA-binding or target mRNA cleavage. Abrogates binding to the 7-methylguanosine cap of mRNA and prevents inhibition of translation. Abolishes interaction with TNRC6C; when associated with V-505.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" }, { "database": "PubMed", "id": "21981923", "url": "https://pubmed.ncbi.nlm.nih.gov/21981923" }, { "database": "PubMed", "id": "17524464", "url": "https://pubmed.ncbi.nlm.nih.gov/17524464" } ], "uniprot_canonical_ac": "Q9UKV8-1" }, { "start_pos": 470, "end_pos": 470, "sequence_org": "F", "sequence_mut": "W", "comment": "No effect on binding to the 7-methylguanosine cap of mRNA or inhibition of translation.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" }, { "database": "PubMed", "id": "21981923", "url": "https://pubmed.ncbi.nlm.nih.gov/21981923" }, { "database": "PubMed", "id": "17524464", "url": "https://pubmed.ncbi.nlm.nih.gov/17524464" } ], "uniprot_canonical_ac": "Q9UKV8-1" }, { "start_pos": 505, "end_pos": 505, "sequence_org": "F", "sequence_mut": "V", "comment": "No effect on miRNA-binding or target mRNA cleavage. Abrogates binding to the 7-methylguanosine cap of mRNA and prevents inhibition of translation and abolishes interaction with TNRC6C; when associated with V-470.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" }, { "database": "PubMed", "id": "21981923", "url": "https://pubmed.ncbi.nlm.nih.gov/21981923" }, { "database": "PubMed", "id": "17524464", "url": "https://pubmed.ncbi.nlm.nih.gov/17524464" } ], "uniprot_canonical_ac": "Q9UKV8-1" }, { "start_pos": 505, "end_pos": 505, "sequence_org": "F", "sequence_mut": "W", "comment": "No effect on binding to the 7-methylguanosine cap of mRNA or inhibition of translation.", "evidence": [ { "database": "UniProtKB", "id": "Q9UKV8", "url": "https://www.uniprot.org/uniprotkb/Q9UKV8" }, { "database": "PubMed", "id": "21981923", "url": "https://pubmed.ncbi.nlm.nih.gov/21981923" }, { "database": "PubMed", "id": "17524464", "url": "https://pubmed.ncbi.nlm.nih.gov/17524464" } ], 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Switching from repression to activation: microRNAs can up-regulate translation.", "journal": "Science (New York, N.Y.)", "date": "2007-12-21", "authors": "Vasudevan Shobha, Tong Yingchun, Steitz 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