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"journal": "Cell", "date": "2007-08-10", "authors": "Kim Injune, Saunders Thomas L, Morrison Sean J", "reference": { "type": "PubMed", "id": "17655922", "url": "https://pubmed.ncbi.nlm.nih.gov/17655922" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61473-1", "protein_name": "Transcription factor SOX-17", "gene_name": "Sox17", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61473", "url": "https://www.uniprot.org/uniprotkb/Q61473" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.17655922", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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Chem.", "date": "2009", "authors": "Lee YY, Cevallos RC, Jan E", "reference": { "type": "PubMed", "id": "19131336", "url": "https://pubmed.ncbi.nlm.nih.gov/19131336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17564-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15A", "gene_name": "Ppp1r15a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6ZWX6-1", "protein_name": "Eukaryotic translation initiation factor 2 subunit 1", "gene_name": "Eif2s1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O75807-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15A", "gene_name": "PPP1R15A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05198-1", "protein_name": "Eukaryotic translation initiation factor 2 subunit 1", "gene_name": "EIF2S1", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P17564", "url": "https://www.uniprot.org/uniprotkb/P17564" } ], 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Cell. Biol.", "date": "1994", "authors": "Zhan Q, Lord KA, Alamo I Jr, Hollander MC, Carrier F, Ron D, Kohn KW, Hoffman B, Liebermann DA, Fornace AJ Jr", "reference": { "type": "PubMed", "id": "8139541", "url": "https://pubmed.ncbi.nlm.nih.gov/8139541" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17564-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15A", "gene_name": "Ppp1r15a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6IN02-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15A", "gene_name": "Ppp1r15a", "tax_name": "Rat" }, { "uniprot_canonical_ac": "O75807-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15A", "gene_name": "PPP1R15A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48316-1", "protein_name": "Growth arrest and DNA damage-inducible protein GADD45 alpha", "gene_name": "Gadd45a", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P17564", "url": "https://www.uniprot.org/uniprotkb/P17564" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8139541", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The gamma(1)34.5 protein of herpes simplex virus 1 complexes with protein phosphatase 1alpha to dephosphorylate the alpha subunit of the eukaryotic translation initiation factor 2 and preclude the shutoff of protein synthesis by double-stranded RNA-activated protein kinase.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "1997", "authors": "He B, Gross M, Roizman B", "reference": { "type": "PubMed", "id": "9023344", "url": "https://pubmed.ncbi.nlm.nih.gov/9023344" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17564-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15A", "gene_name": "Ppp1r15a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P62136-1", "protein_name": "Serine/threonine-protein phosphatase PP1-alpha catalytic subunit", "gene_name": "PPP1CA", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P17564", "url": "https://www.uniprot.org/uniprotkb/P17564" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9023344", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The herpes simplex virus virulence factor ICP34.5 and the cellular protein MyD116 complex with proliferating cell nuclear antigen through the 63-amino-acid domain conserved in ICP34.5, MyD116, and GADD34.", "journal": "J. Virol.", "date": "1997", "authors": "Brown S M, MacLean A R, McKie E A, Harland J", "reference": { "type": "PubMed", "id": "9371605", "url": "https://pubmed.ncbi.nlm.nih.gov/9371605" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P17564-1", "protein_name": "Protein phosphatase 1 regulatory subunit 15A", "gene_name": "Ppp1r15a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P17918-1", "protein_name": "DNA sliding clamp PCNA", "gene_name": "Pcna", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P17564", "url": "https://www.uniprot.org/uniprotkb/P17564" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9371605", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": 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], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P54822", "url": "https://www.uniprot.org/uniprotkb/P54822" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8530047", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Expression of mammalian paralogues of HRAD9 and Mrad9 checkpoint control genes in normal and cancerous testicular tissue.", "journal": "Cancer Res.", "date": "2003", "authors": "Hopkins KM, Wang X, Berlin A, Hang H, Thaker HM, Lieberman HB", "reference": { "type": "PubMed", "id": "14500360", "url": "https://pubmed.ncbi.nlm.nih.gov/14500360" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6WBX7-1", "protein_name": "Cell cycle checkpoint control protein RAD9B", "gene_name": "Rad9b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q14566-1", "protein_name": "DNA replication licensing factor MCM6", "gene_name": "MCM6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBD5-1", "protein_name": "Origin recognition complex subunit 3", "gene_name": "ORC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13415-1", "protein_name": "Origin recognition complex subunit 1", "gene_name": 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replication licensing factor MCM2", "gene_name": "MCM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14757-1", "protein_name": "Serine/threonine-protein kinase Chk1", "gene_name": "CHEK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15927-1", "protein_name": "Replication protein A 32 kDa subunit", "gene_name": "RPA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40938-1", "protein_name": "Replication factor C subunit 3", "gene_name": "RFC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40937-1", "protein_name": "Replication factor C subunit 5", "gene_name": "RFC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P25205-1", "protein_name": "DNA replication licensing factor MCM3", "gene_name": "MCM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33992-1", "protein_name": "DNA replication licensing factor MCM5", "gene_name": "MCM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43929-1", "protein_name": "Origin recognition complex subunit 4", "gene_name": "ORC4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6WBX8-5", "protein_name": "Cell cycle checkpoint control protein RAD9B", "gene_name": "RAD9B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24941-1", "protein_name": "Cyclin-dependent kinase 2", "gene_name": "CDK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99741-1", "protein_name": "DNA replication factor CDC6", "gene_name": "CDC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAW4-1", "protein_name": "Claspin", "gene_name": "CLSPN", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60921-1", "protein_name": "Checkpoint protein HUS1", "gene_name": "HUS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60671-1", "protein_name": "Cell cycle checkpoint protein RAD1", "gene_name": "RAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5N6-1", "protein_name": "Origin recognition complex subunit 6", "gene_name": "ORC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHY5-1", 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Cell. Biol.", "date": "2003", "authors": "Tzouanacou E, Tweedie S, Wilson V", "reference": { "type": "PubMed", "id": "14612400", "url": "https://pubmed.ncbi.nlm.nih.gov/14612400" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6ZPI0-1", "protein_name": "Protein Jade-1", "gene_name": "Jade1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q803A0-1", "protein_name": "Protein Jade-1", "gene_name": "jade1", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7ZVP1-1", "protein_name": "Protein Jade-3", "gene_name": "jade3", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "Q6ZQF7-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "Jade2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", 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"o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The coactivator-associated arginine methyltransferase is necessary for muscle differentiation: CARM1 coactivates myocyte enhancer factor-2.", "journal": "J. Biol. Chem.", "date": "2002", "authors": "Chen Shen Liang, Loffler Kelly A, Chen Dagang, Stallcup Michael R, Muscat George E O", "reference": { "type": "PubMed", "id": "11713257", "url": "https://pubmed.ncbi.nlm.nih.gov/11713257" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CFN5-1", "protein_name": "Myocyte-specific enhancer factor 2C", "gene_name": "Mef2c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9WVG6-1", "protein_name": "Histone-arginine methyltransferase CARM1", "gene_name": "Carm1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CFN5", "url": "https://www.uniprot.org/uniprotkb/Q8CFN5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11713257", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phosphorylation and alternative pre-mRNA splicing converge to regulate myocyte enhancer factor 2C activity.", "journal": "Mol. Cell. Biol.", "date": "2004", "authors": "Zhu B, Gulick T", "reference": { "type": "PubMed", "id": "15340086", "url": "https://pubmed.ncbi.nlm.nih.gov/15340086" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CFN5-1", "protein_name": "Myocyte-specific enhancer factor 2C", "gene_name": "Mef2c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q06413-1", "protein_name": "Myocyte-specific enhancer factor 2C", "gene_name": "MEF2C", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CFN5", "url": "https://www.uniprot.org/uniprotkb/Q8CFN5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 396, "end_pos": 396, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes sumoylation. Enhanced transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "PubMed", "id": "16478538", "url": "https://pubmed.ncbi.nlm.nih.gov/16478538" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" }, { "database": "PubMed", "id": "15340086", "url": "https://pubmed.ncbi.nlm.nih.gov/15340086" } ], "uniprot_canonical_ac": "Q06413-1" }, { "start_pos": 396, "end_pos": 396, "sequence_org": "S", "sequence_mut": "A", "comment": "No change in transactivational activation for isoforms with or without the beta domain.", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "PubMed", "id": "16478538", "url": "https://pubmed.ncbi.nlm.nih.gov/16478538" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" }, { "database": "PubMed", "id": "15340086", "url": "https://pubmed.ncbi.nlm.nih.gov/15340086" } ], "uniprot_canonical_ac": "Q06413-1" }, { "start_pos": 396, "end_pos": 396, "sequence_org": "S", "sequence_mut": "C", "comment": "Abolishes sumoylation. Enhanced transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "PubMed", "id": "16478538", "url": "https://pubmed.ncbi.nlm.nih.gov/16478538" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" }, { "database": "PubMed", "id": "15340086", "url": "https://pubmed.ncbi.nlm.nih.gov/15340086" } ], "uniprot_canonical_ac": "Q06413-1" }, { "start_pos": 396, "end_pos": 396, "sequence_org": "S", "sequence_mut": "E", "comment": "No effect on sumoylation. No effect on transcriptional activity.", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "PubMed", "id": "16478538", "url": "https://pubmed.ncbi.nlm.nih.gov/16478538" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" }, { "database": "PubMed", "id": "15340086", "url": "https://pubmed.ncbi.nlm.nih.gov/15340086" } ], "uniprot_canonical_ac": "Q06413-1" } ], "phosphorylation": [ { "start_pos": 396, "end_pos": 396, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by CDK5", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "iPTMnet", "id": "Q06413", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/Q06413" }, { "database": "PubMed", "id": "16478538", "url": "https://pubmed.ncbi.nlm.nih.gov/16478538" }, { "database": "PRO", "id": "Q06413", "url": "https://proconsortium.org/cgi-bin/entry_pro?id=Q06413" }, { "database": "PubMed", "id": "15340086", "url": "https://pubmed.ncbi.nlm.nih.gov/15340086" } ], "site_lbl": "Ser396", "uniprot_canonical_ac": "Q06413-1" } ], "record_id": "pubmed.15340086", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Alternative pre-mRNA splicing governs expression of a conserved acidic transactivation domain in myocyte enhancer factor 2 factors of striated muscle and brain.", "journal": "J. Biol. Chem.", "date": "2005", "authors": "Zhu B, Ramachandran B, Gulick T", "reference": { "type": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CFN5-1", "protein_name": "Myocyte-specific enhancer factor 2C", "gene_name": "Mef2c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q02078-1", "protein_name": "Myocyte-specific enhancer factor 2A", "gene_name": "MEF2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60929-1", "protein_name": "Myocyte-specific enhancer factor 2A", "gene_name": "Mef2a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q14814-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "MEF2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63943-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "Mef2d", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q06413-1", "protein_name": "Myocyte-specific enhancer factor 2C", "gene_name": "MEF2C", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CFN5", "url": "https://www.uniprot.org/uniprotkb/Q8CFN5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "mutagenesis": [ { "start_pos": 286, "end_pos": 286, "sequence_org": "T", "sequence_mut": "A", "comment": "Same transcriptional activity as for isoforms with beta domain.", "evidence": [ { "database": "UniProtKB", "id": "Q14814", "url": "https://www.uniprot.org/uniprotkb/Q14814" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q14814-1" }, { "start_pos": 287, "end_pos": 287, "sequence_org": "E", "sequence_mut": "Q", "comment": "Abolishes transcriptional activity; when associated with N-288 and N-291.", "evidence": [ { "database": "UniProtKB", "id": "Q14814", "url": "https://www.uniprot.org/uniprotkb/Q14814" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q14814-1" }, { "start_pos": 288, "end_pos": 288, "sequence_org": "D", "sequence_mut": "A", "comment": "Abolishes cleavage by caspase 7.", "evidence": [ { "database": "UniProtKB", "id": "Q14814", "url": "https://www.uniprot.org/uniprotkb/Q14814" }, { "database": "PubMed", "id": "11904443", "url": "https://pubmed.ncbi.nlm.nih.gov/11904443" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q14814-1" }, { "start_pos": 288, "end_pos": 288, "sequence_org": "D", "sequence_mut": "N", "comment": "Abolishes transcriptional activity; when associated with Q-287 and N-291.", "evidence": [ { "database": "UniProtKB", "id": "Q14814", "url": "https://www.uniprot.org/uniprotkb/Q14814" }, { "database": "PubMed", "id": "11904443", "url": "https://pubmed.ncbi.nlm.nih.gov/11904443" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q14814-1" }, { "start_pos": 289, "end_pos": 289, "sequence_org": "H", "sequence_mut": "A", "comment": "Same transcriptional activity as for isoforms with beta domain.", "evidence": [ { "database": "UniProtKB", "id": "Q14814", "url": "https://www.uniprot.org/uniprotkb/Q14814" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q14814-1" }, { "start_pos": 291, "end_pos": 291, "sequence_org": "D", "sequence_mut": "N", "comment": "Abolishes transcriptional activity; when associated with Q-287 and N-288.", "evidence": [ { "database": "UniProtKB", "id": "Q14814", "url": "https://www.uniprot.org/uniprotkb/Q14814" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q14814-1" }, { "start_pos": 271, "end_pos": 271, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on transcriptional activation.", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q06413-1" }, { "start_pos": 272, "end_pos": 272, "sequence_org": "E", "sequence_mut": "Q", "comment": "Reduced transcriptional activation. Completely abolishes transcriptional activation; when associated with N-273 and N-275.", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q06413-1" }, { "start_pos": 273, "end_pos": 273, "sequence_org": "D", "sequence_mut": "N", "comment": "Reduced transcriptional activation. Completely abolishes transcriptional activation; when associated with Q-272 and N-275.", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q06413-1" }, { "start_pos": 275, "end_pos": 275, "sequence_org": "D", "sequence_mut": "N", "comment": "Reduced transcriptional activation. Completely abolishes transcriptional activation; when associated with Q-272 and N-273.", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q06413-1" }, { "start_pos": 387, "end_pos": 387, "sequence_org": "S", "sequence_mut": "A", "comment": "No change in transactivational activation for isoforms with or without the beta domain.", "evidence": [ { "database": "UniProtKB", "id": "Q06413", "url": "https://www.uniprot.org/uniprotkb/Q06413" }, { "database": "PubMed", "id": "15834131", "url": "https://pubmed.ncbi.nlm.nih.gov/15834131" } ], "uniprot_canonical_ac": "Q06413-1" }, { "start_pos": 396, "end_pos": 396, "sequence_org": "S", "sequence_mut": "A", "comment": "Abolishes sumoylation. 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcription factor Mef2c is required for B cell proliferation and survival after antigen receptor stimulation.", "journal": "Nature immunology", "date": "2008-06", "authors": "Wilker Peter R, Kohyama Masako, Sandau Michelle M, Albring J\u00f6rn C, Nakagawa Osamu, Schwarz John J, Murphy Kenneth M", "reference": { "type": "PubMed", "id": "18438409", "url": "https://pubmed.ncbi.nlm.nih.gov/18438409" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CFN5-1", "protein_name": "Myocyte-specific enhancer factor 2C", "gene_name": "Mef2c", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CFN5", "url": "https://www.uniprot.org/uniprotkb/Q8CFN5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.18438409", "abstract": "", "glycosylation": 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Ragusa Michael J, Shea Katherine L, McKercher Scott R, Zaremba Jeffrey D, Soussou Walid, Nie Zhiguo, Kang Yeon-Joo, Nakanishi Nobuki, Okamoto Shu-ichi, Roberts Amanda J, Schwarz John J, Lipton Stuart A", "reference": { "type": "PubMed", "id": "18599437", "url": "https://pubmed.ncbi.nlm.nih.gov/18599437" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CFN5-1", "protein_name": "Myocyte-specific enhancer factor 2C", "gene_name": "Mef2c", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CFN5", "url": "https://www.uniprot.org/uniprotkb/Q8CFN5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.18599437", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", 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Mol. Brain Res.", "date": "1996", "authors": "Lin X, Shah S, Bulleit R F", "reference": { "type": "PubMed", "id": "9013788", "url": "https://pubmed.ncbi.nlm.nih.gov/9013788" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8CFN5-1", "protein_name": "Myocyte-specific enhancer factor 2C", "gene_name": "Mef2c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q60929-1", "protein_name": "Myocyte-specific enhancer factor 2A", "gene_name": "Mef2a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q63943-1", "protein_name": "Myocyte-specific enhancer factor 2D", "gene_name": "Mef2d", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8CFN5", "url": "https://www.uniprot.org/uniprotkb/Q8CFN5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9013788", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"Dysregulated signaling pathways in the development of CNTRL-FGFR1-induced myeloid and lymphoid malignancies associated with FGFR1 in human and mouse models.", "journal": "Blood", "date": "2013", "authors": "Ren M, Qin H, Kitamura E, Cowell JK", "reference": { "type": "PubMed", "id": "23777766", "url": "https://pubmed.ncbi.nlm.nih.gov/23777766" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A2AL36-1", "protein_name": "Centriolin", "gene_name": "Cntrl", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q7Z7A1-1", "protein_name": "Centriolin", "gene_name": "CNTRL", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "A2AL36", "url": "https://www.uniprot.org/uniprotkb/A2AL36" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.23777766", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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[10090]" } ], "record_id": "pubmed.19793914", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 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O'Connor AE, Merriner DJ, Okuda H, Whittle B, Jans DA, Efthymiadis A, McLachlan RI, Ormandy CJ, Goodnow CC, Jamsai D, O'Bryan MK", "reference": { "type": "PubMed", "id": "25781171", "url": "https://pubmed.ncbi.nlm.nih.gov/25781171" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7TMK6-1", "protein_name": "Protein Hook homolog 2", "gene_name": "Hook2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q96M69-1", "protein_name": "Leucine-rich repeat and guanylate kinase domain-containing protein", "gene_name": "LRGUK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9D5S7-1", "protein_name": "Leucine-rich repeat and guanylate kinase domain-containing protein", "gene_name": "Lrguk", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q7TMK6", "url": "https://www.uniprot.org/uniprotkb/Q7TMK6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.25781171", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 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Jo, Jamsai Duangporn, O'Bryan Moira K", "reference": { "type": "PubMed", "id": "28003339", "url": "https://pubmed.ncbi.nlm.nih.gov/28003339" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7TMK6-1", "protein_name": "Protein Hook homolog 2", "gene_name": "Hook2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BUK6-1", "protein_name": "Protein Hook homolog 3", "gene_name": "Hook3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BIL5-1", "protein_name": "Protein Hook homolog 1", "gene_name": "Hook1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3V0F0-1", "protein_name": "RIMS-binding protein 3", "gene_name": "Rimbp3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q91W40-1", "protein_name": "Kinesin light chain 3", "gene_name": "Klc3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D5S7-1", "protein_name": "Leucine-rich repeat and guanylate kinase domain-containing protein", "gene_name": "Lrguk", "tax_name": "Mouse" } ], "species": 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ccdc181 is a microtubule-binding protein that interacts with Hook1 in haploid male germ cells and localizes to the sperm tail and motile cilia.", "journal": "Eur. J. Cell Biol.", "date": "2017", "authors": "Schwarz T, Prieler B, Schmid JA, Grzmil P, Neesen J", "reference": { "type": "PubMed", "id": "28283191", "url": "https://pubmed.ncbi.nlm.nih.gov/28283191" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7TMK6-1", "protein_name": "Protein Hook homolog 2", "gene_name": "Hook2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BUK6-1", "protein_name": "Protein Hook homolog 3", "gene_name": "Hook3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BIL5-1", "protein_name": "Protein Hook homolog 1", "gene_name": "Hook1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q80ZU5-1", "protein_name": "Coiled-coil domain-containing protein 181", "gene_name": "Ccdc181", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q7TMK6", "url": "https://www.uniprot.org/uniprotkb/Q7TMK6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.28283191", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The complexity of the Rab and Rho GTP-binding protein subfamilies revealed by a PCR cloning approach.", "journal": "Gene", "date": "1992", "authors": "Chavrier P, Simons K, Zerial M", "reference": { "type": "PubMed", "id": "1555775", "url": "https://pubmed.ncbi.nlm.nih.gov/1555775" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35279-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "Rab6a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35282-1", "protein_name": "Ras-related protein Rab-21", "gene_name": "Rab21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35293-1", "protein_name": "Ras-related protein Rab-18", "gene_name": "Rab18", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P62827-1", "protein_name": "GTP-binding nuclear protein Ran", "gene_name": "Ran", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P61021-1", "protein_name": "Ras-related protein Rab-5B", "gene_name": "Rab5b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35288-1", "protein_name": "Ras-related protein Rab-23", "gene_name": "Rab23", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35292-1", "protein_name": "Ras-related protein Rab-17", "gene_name": "Rab17", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35278-1", "protein_name": "Ras-related protein Rab-5C", "gene_name": "Rab5c", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99JI6-1", "protein_name": "Ras-related protein Rap-1b", "gene_name": "Rap1b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35285-1", "protein_name": "Ras-related protein Rab-22A", "gene_name": "Rab22a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35295-1", "protein_name": "Ras-related protein Rab-20", "gene_name": "Rab20", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35283-1", "protein_name": "Ras-related protein Rab-12", "gene_name": "Rab12", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35290-1", "protein_name": "Ras-related protein Rab-24", "gene_name": "Rab24", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P35294-1", "protein_name": "Ras-related protein Rab-19", "gene_name": "Rab19", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P35279", "url": "https://www.uniprot.org/uniprotkb/P35279" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1555775", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 14 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gerodermia osteodysplastica is caused by mutations in SCYL1BP1, a Rab-6 interacting golgin.", "journal": "Nat. Genet.", "date": "2008", "authors": "Hennies HC, Kornak U, Zhang H, Egerer J, Zhang X, Seifert W, Kuhnisch J, Budde B, Natebus M, Brancati F, Wilcox WR, Muller D, Kaplan PB, Rajab A, Zampino G, Fodale V, Dallapiccola B, Newman W, Metcalfe K, Clayton-Smith J, Tassabehji M, Steinmann B, Barr FA, Nurnberg P, Wieacker P, Mundlos S", "reference": { "type": "PubMed", "id": "18997784", "url": "https://pubmed.ncbi.nlm.nih.gov/18997784" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35279-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "Rab6a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P20340-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "RAB6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T7V8-1", "protein_name": "RAB6-interacting golgin", "gene_name": "GORAB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BRM2-1", "protein_name": "RAB6-interacting golgin", "gene_name": "Gorab", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P35279", "url": "https://www.uniprot.org/uniprotkb/P35279" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.18997784", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Cell", "date": "2010", "authors": "Kinzel D, Boldt K, Davis EE, Burtscher I, Trumbach D, Diplas B, Attie-Bitach T, Wurst W, Katsanis N, Ueffing M, Lickert H", "reference": { "type": "PubMed", "id": "20643351", "url": "https://pubmed.ncbi.nlm.nih.gov/20643351" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35279-1", "protein_name": "Ras-related protein Rab-6A", "gene_name": "Rab6a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O14965-1", "protein_name": "Aurora kinase A", "gene_name": "AURKA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3SXY8-1", "protein_name": "ADP-ribosylation factor-like protein 13B", "gene_name": "ARL13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y496-1", "protein_name": "Kinesin-like protein KIF3A", "gene_name": "KIF3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q640N2-1", "protein_name": "ADP-ribosylation factor-like protein 13B", "gene_name": "Arl13b", "tax_name": "Mouse" }, { 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Cell. Biol.", "date": "1992", "authors": "Nielsen A L, Pallisgaard N, Pedersen F S, J\u00f8rgensen P", "reference": { "type": "PubMed", "id": "1321336", "url": "https://pubmed.ncbi.nlm.nih.gov/1321336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61286-1", "protein_name": "Transcription factor 12", "gene_name": "Tcf12", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61286", "url": "https://www.uniprot.org/uniprotkb/Q61286" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1321336", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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[] } ] }, { "title": "ME1 and GE1: basic helix-loop-helix transcription factors expressed at high levels in the developing nervous system and in morphogenetically active regions.", "journal": "Eur. J. Neurosci.", "date": "1993", "authors": "Neuman T, Keen A, Knapik E, Shain D, Ross M, Nornes H O, Zuber M X", "reference": { "type": "PubMed", "id": "8261111", "url": "https://pubmed.ncbi.nlm.nih.gov/8261111" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61286-1", "protein_name": "Transcription factor 12", "gene_name": "Tcf12", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P30985-1", "protein_name": "Transcription factor 12", "gene_name": "TCF12", "tax_name": "Chicken" }, { "uniprot_canonical_ac": "Q90683-1", "protein_name": "Transcription factor 4", "gene_name": "TCF4", "tax_name": "Chicken" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61286", "url": "https://www.uniprot.org/uniprotkb/Q61286" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8261111", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Interaction of mouse TTC30/DYF-1 with multiple intraflagellar transport complex B proteins and KIF17.", "journal": "Exp. Cell Res.", "date": "2013", "authors": "Howard Paul W, Jue Shall F, Maurer Richard A", "reference": { "type": "PubMed", "id": "23810713", "url": "https://pubmed.ncbi.nlm.nih.gov/23810713" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9D0P8-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "Ift27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62559-1", "protein_name": "Intraflagellar transport protein 52 homolog", "gene_name": "Ift52", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O35594-1", "protein_name": "Intraflagellar transport protein 81 homolog", "gene_name": "Ift81", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K057-1", "protein_name": "Intraflagellar transport protein 80 homolog", "gene_name": "Ift80", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6VH22-1", "protein_name": "Intraflagellar transport protein 172 homolog", "gene_name": "Ift172", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q61371-1", "protein_name": "Intraflagellar transport protein 88 homolog", "gene_name": "Ift88", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9DB07-1", "protein_name": "Intraflagellar transport protein 46 homolog", "gene_name": "Ift46", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BKE9-1", "protein_name": "Intraflagellar transport protein 74 homolog", "gene_name": "Ift74", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99PW8-1", "protein_name": "Kinesin-like protein KIF17", "gene_name": "Kif17", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "A2AKQ8-1", "protein_name": "Intraflagellar transport protein 70A2", "gene_name": "Ift70a2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99J38-1", "protein_name": "Intraflagellar transport protein 70A1", "gene_name": "Ift70a1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BXG3-1", "protein_name": "Intraflagellar transport protein 57 homolog", "gene_name": "Ift57", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CY00-1", "protein_name": "Intraflagellar transport protein 70B", "gene_name": "Ift70b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9D0P8", "url": "https://www.uniprot.org/uniprotkb/Q9D0P8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.23810713", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 13 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "IFT27 links the BBSome to IFT for maintenance of the ciliary signaling compartment.", "journal": "Developmental cell", "date": "2014", "authors": "Eguether T, San Agustin JT, Keady BT, Jonassen JA, Liang Y, Francis R, Tobita K, Johnson CA, Abdelhamed ZA, Lo CW, Pazour GJ", "reference": { "type": "PubMed", "id": "25446516", "url": "https://pubmed.ncbi.nlm.nih.gov/25446516" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9D0P8-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "Ift27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P49368-1", "protein_name": "T-complex protein 1 subunit gamma", "gene_name": "CCT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50991-1", "protein_name": "T-complex protein 1 subunit delta", "gene_name": "CCT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32745-1", "protein_name": "Somatostatin receptor type 3", "gene_name": "SSTR3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99835-1", "protein_name": "Protein smoothened", "gene_name": "SMO", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3SYG4-1", "protein_name": "Protein PTHB1", "gene_name": "BBS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N3I7-1", "protein_name": "BBSome complex member BBS5", "gene_name": "BBS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0F7-1", "protein_name": "ADP-ribosylation factor-like protein 6", "gene_name": "ARL6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAM2-1", "protein_name": "Tetratricopeptide repeat protein 8", "gene_name": "TTC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QF0-1", "protein_name": "Rab-3A-interacting protein", "gene_name": "RAB3IP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFJ9-1", "protein_name": "BBSome complex member BBS1", "gene_name": "BBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWZ6-1", "protein_name": "BBSome complex member BBS7", "gene_name": "BBS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RK4-1", "protein_name": "BBSome complex member BBS4", "gene_name": "BBS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXC9-1", "protein_name": "BBSome complex member BBS2", "gene_name": "BBS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TAM1-1", "protein_name": "BBSome complex assembly protein BBS10", "gene_name": "BBS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZW61-1", "protein_name": "Chaperonin-containing T-complex member BBS12", "gene_name": "BBS12", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MTZ0-1", "protein_name": "BBSome-interacting protein 1", "gene_name": "BBIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78371-1", "protein_name": "T-complex protein 1 subunit beta", "gene_name": "CCT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPJ1-1", "protein_name": "Molecular chaperone MKKS", "gene_name": "MKKS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48643-1", "protein_name": "T-complex protein 1 subunit epsilon", "gene_name": "CCT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQ48-1", "protein_name": "Leucine zipper transcription factor-like protein 1", "gene_name": "LZTFL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99705-1", "protein_name": "Melanin-concentrating hormone receptor 1", "gene_name": "MCHR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50990-1", "protein_name": "T-complex protein 1 subunit theta", "gene_name": "CCT8", "tax_name": "Human" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9D0P8", "url": "https://www.uniprot.org/uniprotkb/Q9D0P8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.25446516", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 24 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "IFT25, an intraflagellar transporter protein dispensable for ciliogenesis in somatic cells, is essential for sperm flagella formation.", "journal": "Biol. Reprod.", "date": "2017", "authors": "Liu H, Li W, Zhang Y, Zhang Z, Shang X, Zhang L, Zhang S, Li Y, Somoza AV, Delpi B, Gerton GL, Foster JA, Hess RA, Pazour GJ, Zhang Z", "reference": { "type": "PubMed", "id": "28430876", "url": "https://pubmed.ncbi.nlm.nih.gov/28430876" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9D0P8-1", "protein_name": "Intraflagellar transport protein 27 homolog", "gene_name": "Ift27", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9D6H2-1", "protein_name": "Intraflagellar transport protein 25 homolog", "gene_name": "Ift25", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9D0P8", "url": "https://www.uniprot.org/uniprotkb/Q9D0P8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.28430876", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Intraflagellar transporter protein (IFT27), an IFT25 binding partner, is essential for male fertility and spermiogenesis in mice.", "journal": "Developmental biology", "date": "2017", "authors": "Zhang Y, Liu H, Li W, Zhang Z, Shang X, Zhang D, Li Y, Zhang S, Liu J, Hess RA, Pazour GJ, Zhang Z", "reference": { "type": 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Natl. Acad. Sci. U.S.A.", "date": "1992", "authors": "Muramatsu T, Giri PR, Higuchi S, Kincaid RL", "reference": { "type": "PubMed", "id": "1309945", "url": "https://pubmed.ncbi.nlm.nih.gov/1309945" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P48455-1", "protein_name": "Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform", "gene_name": "Ppp3cc", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P48455", "url": "https://www.uniprot.org/uniprotkb/P48455" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1309945", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Calcineurin regulates bone formation by the osteoblast.", "journal": "Proc. 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"sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A polymerase chain reaction strategy to identify and clone cyclic nucleotide phosphodiesterase cDNAs. Molecular cloning of the cDNA encoding the 63-kDa calmodulin-dependent phosphodiesterase.", "journal": "J. Biol. Chem.", "date": "1992", "authors": "Repaske DR, Swinnen JV, Jin SL, Van Wyk JJ, Conti M", "reference": { "type": "PubMed", "id": "1326532", "url": "https://pubmed.ncbi.nlm.nih.gov/1326532" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q01065-1", "protein_name": "Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B", "gene_name": "Pde1b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q01062-1", "protein_name": "cGMP-dependent 3',5'-cyclic phosphodiesterase", "gene_name": "Pde2a", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q01066-1", "protein_name": "Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B", "gene_name": "Pde1b", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q01064-1", "protein_name": "Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B", "gene_name": "PDE1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01063-1", "protein_name": "3',5'-cyclic-AMP phosphodiesterase 4D", "gene_name": "Pde4d", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q01065", "url": "https://www.uniprot.org/uniprotkb/Q01065" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1326532", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning of DNA encoding a calmodulin-dependent phosphodiesterase enriched in striatum.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "1992", "authors": "Polli J W, Kincaid R L", "reference": { "type": "PubMed", "id": "1332068", "url": "https://pubmed.ncbi.nlm.nih.gov/1332068" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q01065-1", "protein_name": "Dual specificity calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B", "gene_name": "Pde1b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q01065", "url": "https://www.uniprot.org/uniprotkb/Q01065" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1332068", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]