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Pharmacol.", "date": "1998", "authors": "Dajani R, Hood A M, Coughtrie M W", "reference": { "type": "PubMed", "id": "9855620", "url": "https://pubmed.ncbi.nlm.nih.gov/9855620" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P50225-1", "protein_name": "Sulfotransferase 1A1", "gene_name": "SULT1A1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P50225", "url": "https://www.uniprot.org/uniprotkb/P50225" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9855620", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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U.S.A.", "date": "2004", "authors": "Yap Melvyn W, Nisole S\u00e9bastien, Lynch Clare, Stoye Jonathan P", "reference": { "type": "PubMed", "id": "15249690", "url": "https://pubmed.ncbi.nlm.nih.gov/15249690" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C035-1", "protein_name": "Tripartite motif-containing protein 5", "gene_name": "TRIM5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9C035", "url": "https://www.uniprot.org/uniprotkb/Q9C035" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15249690", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "High-frequency persistence of an impaired allele of the retroviral defense gene TRIM5alpha in humans.", "journal": "Curr. 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virology", "date": "2011-08", "authors": "Battivelli Emilie, Migraine Julie, Lecossier Denise, Matsuoka Saori, Perez-Bercoff Danielle, Saragosti Sentob, Clavel Fran\u00e7ois, Hance Allan J", "reference": { "type": "PubMed", "id": "21632761", "url": "https://pubmed.ncbi.nlm.nih.gov/21632761" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C035-1", "protein_name": "Tripartite motif-containing protein 5", "gene_name": "TRIM5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9C035", "url": "https://www.uniprot.org/uniprotkb/Q9C035" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21632761", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Biol. Chem.", "date": "2011", "authors": "Li X, Yeung DF, Fiegen AM, Sodroski J", "reference": { "type": "PubMed", "id": "21680743", "url": "https://pubmed.ncbi.nlm.nih.gov/21680743" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C035-1", "protein_name": "Tripartite motif-containing protein 5", "gene_name": "TRIM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C030-1", "protein_name": "Tripartite motif-containing protein 6", "gene_name": "TRIM6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYJ4-1", "protein_name": "E3 ubiquitin-protein ligase TRIM34", "gene_name": "TRIM34", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9C035", "url": "https://www.uniprot.org/uniprotkb/Q9C035" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 121, "end_pos": 121, "sequence_org": "R", "sequence_mut": "E", "comment": "Reduced higher order self-association and association with TRIM5.", "evidence": [ { "database": "UniProtKB", "id": "Q9C030", "url": "https://www.uniprot.org/uniprotkb/Q9C030" }, { "database": "PubMed", "id": "21680743", "url": "https://pubmed.ncbi.nlm.nih.gov/21680743" } ], "uniprot_canonical_ac": "Q9C030-1" }, { "start_pos": 121, "end_pos": 121, "sequence_org": "R", "sequence_mut": "E", "comment": "Reduced association with TRIM5.", "evidence": [ { "database": "UniProtKB", "id": "Q9BYJ4", "url": "https://www.uniprot.org/uniprotkb/Q9BYJ4" }, { "database": "PubMed", "id": "21680743", "url": "https://pubmed.ncbi.nlm.nih.gov/21680743" } ], "uniprot_canonical_ac": "Q9BYJ4-1" } ], "record_id": "pubmed.21680743", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Contribution of E3-ubiquitin ligase activity to HIV-1 restriction by TRIM5alpha(rh): structure of the RING domain of TRIM5alpha.", "journal": "J. Virol.", "date": "2011", "authors": "Lienlaf Maritza, Hayashi Fumiaki, Di Nunzio Francesca, Tochio Naoya, Kigawa Takanori, Yokoyama Shigeyuki, Diaz-Griffero Felipe", "reference": { "type": "PubMed", "id": "21734049", "url": "https://pubmed.ncbi.nlm.nih.gov/21734049" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C035-1", "protein_name": "Tripartite motif-containing protein 5", "gene_name": "TRIM5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9C035", "url": "https://www.uniprot.org/uniprotkb/Q9C035" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21734049", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Opin. Virol.", "date": "2012", "authors": "Gr\u00fctter Markus G, Luban Jeremy", "reference": { "type": "PubMed", "id": "22482711", "url": "https://pubmed.ncbi.nlm.nih.gov/22482711" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C035-1", "protein_name": "Tripartite motif-containing protein 5", "gene_name": "TRIM5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9C035", "url": "https://www.uniprot.org/uniprotkb/Q9C035" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22482711", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Long Noncoding RNA Expression Profiling Reveals Upregulation of Uroplakin 1A and Uroplakin 1A Antisense RNA 1 under Hypoxic Conditions in Lung Cancer Cells.", "journal": "Molecules and cells", "date": "2020", "authors": "Byun Y, Choi YC, Jeong Y, Yoon J, Baek K", "reference": { "type": "PubMed", "id": "33273139", "url": "https://pubmed.ncbi.nlm.nih.gov/33273139" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00322-1", "protein_name": "Uroplakin-1a", "gene_name": "UPK1A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00322", "url": "https://www.uniprot.org/uniprotkb/O00322" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33273139", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"date": "2016", "authors": "Chen M, Meng Q, Qin Y, Liang P, Tan P, He L, Zhou Y, Chen Y, Huang J, Wang RF, Cui J", "reference": { "type": "PubMed", "id": "27666593", "url": "https://pubmed.ncbi.nlm.nih.gov/27666593" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P54578-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 14", "gene_name": "USP14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BVW3-1", "protein_name": "Tripartite motif-containing protein 14", "gene_name": "Trim14", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q14142-1", "protein_name": "Tripartite motif-containing protein 14", "gene_name": "TRIM14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N884-1", "protein_name": "Cyclic GMP-AMP synthase", "gene_name": "CGAS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P54578", "url": "https://www.uniprot.org/uniprotkb/P54578" } ], 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Chem.", "date": "1997", "authors": "Reuber B E, Karl C, Reimann S A, Mihalik S J, Dodt G", "reference": { "type": "PubMed", "id": "9045710", "url": "https://pubmed.ncbi.nlm.nih.gov/9045710" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P0Z9-1", "protein_name": "Peroxisomal sarcosine oxidase", "gene_name": "PIPOX", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P0Z9", "url": "https://www.uniprot.org/uniprotkb/Q9P0Z9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9045710", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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No accumulation of free diubiquitin. 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Increased interaction with diubiquitin.", "evidence": [ { "database": "UniProtKB", "id": "P15374", "url": "https://www.uniprot.org/uniprotkb/P15374" }, { "database": "PubMed", "id": "20380862", "url": "https://pubmed.ncbi.nlm.nih.gov/20380862" }, { "database": "PubMed", "id": "19154770", "url": "https://pubmed.ncbi.nlm.nih.gov/19154770" }, { "database": "PubMed", "id": "9790970", "url": "https://pubmed.ncbi.nlm.nih.gov/9790970" } ], "uniprot_canonical_ac": "P15374-1" } ], "record_id": "pubmed.20380862", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]