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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Integrated analysis of mRNA-seq and miRNA-seq reveals the potential roles of Egr1, Rxra and Max in kidney stone disease.", "journal": "Urolithiasis", "date": "2022-12-09", "authors": "Huang Linxi, Shi Yuxuan, Hu Junjie, Ding Jiarong, Guo Zhiyong, Yu Bing", "reference": { "type": "PubMed", "id": "36484839", "url": "https://pubmed.ncbi.nlm.nih.gov/36484839" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P28574-1", "protein_name": "Protein max", "gene_name": "Max", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P28574", "url": "https://www.uniprot.org/uniprotkb/P28574" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.36484839", "abstract": "", "glycosylation": 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Spriel Annemiek B, de Keijzer Sandra, van der Schaaf Alie, Gartlan Kate H, Sofi Mariam, Light Amanda, Linssen Peter C, Boezeman Jan B, Zuidscherwoude Malou, Reinieren-Beeren Inge, Cambi Alessandra, Mackay Fabienne, Tarlinton David M, Figdor Carl G, Wright Mark D", "reference": { "type": "PubMed", "id": "23150881", "url": "https://pubmed.ncbi.nlm.nih.gov/23150881" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61470-1", "protein_name": "Leukocyte antigen CD37", "gene_name": "Cd37", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61470", "url": "https://www.uniprot.org/uniprotkb/Q61470" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.23150881", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Immunol.", "date": "2015", "authors": "Wee Janet L, Schulze Keith E, Jones Eleanor L, Yeung Louisa, Cheng Qiang, Pereira Candida F, Costin Adam, Ramm Georg, van Spriel Annemiek B, Hickey Michael J, Wright Mark D", "reference": { "type": "PubMed", "id": "26566675", "url": "https://pubmed.ncbi.nlm.nih.gov/26566675" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q61470-1", "protein_name": "Leukocyte antigen CD37", "gene_name": "Cd37", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q61470", "url": "https://www.uniprot.org/uniprotkb/Q61470" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.26566675", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 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meiotic chromosome alignment in mouse oocytes.", "journal": "Oncotarget", "date": "2016", "authors": "Dai XX, Xiong H, Zhang M, Sun S, Xiong B", "reference": { "type": "PubMed", "id": "27177335", "url": "https://pubmed.ncbi.nlm.nih.gov/27177335" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9WVA3-1", "protein_name": "Mitotic checkpoint protein BUB3", "gene_name": "Bub3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9WVA3", "url": "https://www.uniprot.org/uniprotkb/Q9WVA3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.27177335", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional consequences of mutations in CDKL5, an X-linked gene involved in infantile spasms and mental retardation.", "journal": "The Journal of biological chemistry", "date": "2006", "authors": "Bertani I, Rusconi L, Bolognese F, Forlani G, Conca B, De Monte L, Badaracco G, Landsberger N, Kilstrup-Nielsen C", "reference": { "type": "PubMed", "id": "16935860", "url": "https://pubmed.ncbi.nlm.nih.gov/16935860" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3UTQ8-1", 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Baybis Marianna, Elziny Soad, Puffenberger Erik G, Gonzaga-Jauregui Claudia, Poulopoulos Alexandros, Carson Vincent J, Crino Peter B", "reference": { "type": "PubMed", "id": "35136953", "url": "https://pubmed.ncbi.nlm.nih.gov/35136953" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8VIJ8-1", "protein_name": "GATOR1 complex protein NPRL3", "gene_name": "Nprl3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8VIJ8", "url": "https://www.uniprot.org/uniprotkb/Q8VIJ8" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.35136953", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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Commun.", "date": "1996", "authors": "Kameyama T, Murakami Y, Suto F, Kawakami A, Takagi S, Hirata T, Fujisawa H", "reference": { "type": "PubMed", "id": "8806667", "url": "https://pubmed.ncbi.nlm.nih.gov/8806667" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P70206-1", "protein_name": "Plexin-A1", "gene_name": "Plxna1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P70206", "url": "https://www.uniprot.org/uniprotkb/P70206" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8806667", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of plexin family molecules in mice.", "journal": "Biochem. 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning and characterization of mouse CD97.", "journal": "Int. Immunol.", "date": "2000", "authors": "Hamann J, van Zeventer C, Bijl A, Molenaar C, Tesselaar K, van Lier RA", "reference": { "type": "PubMed", "id": "10744645", "url": "https://pubmed.ncbi.nlm.nih.gov/10744645" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Z0M6-1", "protein_name": "Adhesion G protein-coupled receptor E5", "gene_name": "Adgre5", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9Z0M6", "url": "https://www.uniprot.org/uniprotkb/Q9Z0M6" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10744645", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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"Mus musculus [10090]" } ], "record_id": "pubmed.35143305", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential effects of collagen prolyl 3-hydroxylation on skeletal tissues.", "journal": "PLoS genetics", "date": "2014", "authors": "Homan EP, Lietman C, Grafe I, Lennington J, Morello R, Napierala D, Jiang MM, Munivez EM, Dawson B, Bertin TK, Chen Y, Lua R, Lichtarge O, Hicks J, Weis MA, Eyre D, Lee BH", "reference": { "type": "PubMed", "id": "24465224", "url": "https://pubmed.ncbi.nlm.nih.gov/24465224" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q3V1T4-1", "protein_name": "Prolyl 3-hydroxylase 1", "gene_name": "P3h1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q3V1T4", "url": "https://www.uniprot.org/uniprotkb/Q3V1T4" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.24465224", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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