[ { "title": "Control of TRAIL-induced apoptosis by a family of signaling and decoy receptors.", "journal": "Science (New York, N.Y.)", "date": "1997-08-08", "authors": "Sheridan J P, Marsters S A, Pitti R M, Gurney A, Skubatch M, Baldwin D, Ramakrishnan L, Gray C L, Baker K, Wood W I, Goddard A D, Godowski P, Ashkenazi A", "reference": { "type": "PubMed", "id": "9242611", "url": "https://pubmed.ncbi.nlm.nih.gov/9242611" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O14798-1", "protein_name": "Tumor necrosis factor receptor superfamily member 10C", "gene_name": "TNFRSF10C", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14763-1", "protein_name": "Tumor necrosis factor receptor superfamily member 10B", "gene_name": "TNFRSF10B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O14798", "url": "https://www.uniprot.org/uniprotkb/O14798" } ], "common_name": "Human", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning and characterization of TRAIL-R3, a novel member of the emerging TRAIL receptor family.", "journal": "The Journal of experimental medicine", "date": "1997-10-06", "authors": "Degli-Esposti M A, Smolak P J, Walczak H, Waugh J, Huang C P, DuBose R F, Goodwin R G, Smith C A", "reference": { "type": "PubMed", "id": "9314565", "url": "https://pubmed.ncbi.nlm.nih.gov/9314565" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O14798-1", "protein_name": "Tumor necrosis factor receptor superfamily member 10C", "gene_name": "TNFRSF10C", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O14798", "url": "https://www.uniprot.org/uniprotkb/O14798" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9314565", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Control of plasma membrane lipid homeostasis by the extended synaptotagmins.", "journal": "Nature cell biology", "date": "2016", "authors": "Saheki Y, Bian X, Schauder CM, Sawaki Y, Surma MA, Klose C, Pincet F, Reinisch KM, De Camilli P", "reference": { "type": "PubMed", "id": "27065097", "url": "https://pubmed.ncbi.nlm.nih.gov/27065097" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BQG1-1", "protein_name": "Synaptotagmin-3", "gene_name": "SYT3", "tax_name": "Human" } 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An abundance of X-linked genes expressed in spermatogonia.", "journal": "Nat. Genet.", "date": "2001", "authors": "Wang PJ, McCarrey JR, Yang F, Page DC", "reference": { "type": "PubMed", "id": "11279525", "url": "https://pubmed.ncbi.nlm.nih.gov/11279525" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BXU3-1", "protein_name": "Testis-expressed protein 13A", "gene_name": "TEX13A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99MV5-1", "protein_name": "RNA helicase Mov10l1", "gene_name": "Mov10l1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BXT5-1", "protein_name": "Testis-expressed protein 15", "gene_name": "TEX15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXU0-1", "protein_name": "Testis-expressed protein 12", "gene_name": "TEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7M6U3-1", "protein_name": "Inactive serine/threonine-protein kinase TEX14", "gene_name": "Tex14", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9GZY0-1", "protein_name": "Nuclear RNA export factor 2", "gene_name": "NXF2B; NXF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99MW3-1", "protein_name": "Preferentially expressed antigen in melanoma-like protein 1", "gene_name": "Pramel1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99MW1-1", "protein_name": "Serine/threonine-protein kinase 31", "gene_name": "Stk31", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q14AT2-1", "protein_name": "Testis-expressed protein 11", "gene_name": "Tex11", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BXT8-3", "protein_name": "RING finger protein 17", "gene_name": "RNF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "F8VPN2-1", "protein_name": "Testis-expressed protein 15", "gene_name": "Tex15", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99MV2-1", "protein_name": "Testis-expressed protein 19.1", "gene_name": "Tex19.1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BXU8-1", "protein_name": "Ferritin heavy polypeptide-like 17", "gene_name": "FTHL17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXT6-1", "protein_name": "RNA helicase Mov10l1", "gene_name": "MOV10L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99MV7-1", "protein_name": "RING finger protein 17", "gene_name": "Rnf17", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99MX2-1", "protein_name": "Ferritin heavy polypeptide-like 17E", "gene_name": "Fthl17e", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BXU2-1", "protein_name": "Testis-expressed protein 13B", "gene_name": "TEX13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "F6UK53-1", "protein_name": "Testis expressed gene 16", "gene_name": "Tex16", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IYF3-1", "protein_name": "Testis-expressed protein 11", "gene_name": "TEX11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9D3R9-1", "protein_name": "Transcription initiation factor TFIID subunit 7-like", "gene_name": "Taf7l", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99MX0-1", "protein_name": "Transketolase-like protein 1", "gene_name": "Tktl1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CR81-1", "protein_name": "Testis-expressed protein 12", "gene_name": "Tex12", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q99MV1-1", "protein_name": "Tudor domain-containing protein 1", "gene_name": "Tdrd1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8K3Y3-1", "protein_name": "Protein lin-28 homolog A", "gene_name": "Lin28a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9BXU1-1", "protein_name": "Serine/threonine-protein kinase 31", "gene_name": "STK31", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXU7-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 26", "gene_name": "USP26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99MX1-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 26", "gene_name": "Usp26", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8IWB6-1", "protein_name": "Inactive serine/threonine-protein kinase TEX14", "gene_name": "TEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8CDG1-1", "protein_name": "Piwi-like protein 2", "gene_name": "Piwil2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q5H9L4-1", "protein_name": "Transcription initiation factor TFIID subunit 7-like", "gene_name": "TAF7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXT4-1", "protein_name": "Tudor domain-containing protein 1", "gene_name": "TDRD1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BXU3", "url": "https://www.uniprot.org/uniprotkb/Q9BXU3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11279525", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": [ 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of a family of RanBP2-type zinc fingers that can recognize single-stranded RNA.", "journal": "Journal of molecular biology", "date": "2011", "authors": "Nguyen CD, Mansfield RE, Leung W, Vaz PM, Loughlin FE, Grant RP, Mackay JP", "reference": { "type": "PubMed", "id": "21256132", "url": "https://pubmed.ncbi.nlm.nih.gov/21256132" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BXU3-1", "protein_name": "Testis-expressed protein 13A", "gene_name": "TEX13A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95218-1", "protein_name": "Zinc finger Ran-binding domain-containing protein 2", "gene_name": "ZRANB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52756-1", "protein_name": "RNA-binding protein 5", "gene_name": "RBM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01844-1", "protein_name": "RNA-binding protein EWS", "gene_name": "EWSR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P98175-1", "protein_name": "RNA-binding protein 10", "gene_name": "RBM10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92804-1", "protein_name": "TATA-binding protein-associated factor 2N", "gene_name": "TAF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35637-1", "protein_name": "RNA-binding protein FUS", "gene_name": "FUS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BXU3", "url": "https://www.uniprot.org/uniprotkb/Q9BXU3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21256132", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of the cDNA encoding human 6-phosphogluconolactonase, the enzyme catalyzing the second step of the pentose phosphate pathway(1).", "journal": "FEBS letters", "date": "1999", "authors": "Collard F, Collet JF, Gerin I, Veiga-da-Cunha M, Van Schaftingen E", "reference": { "type": "PubMed", "id": "10518023", "url": "https://pubmed.ncbi.nlm.nih.gov/10518023" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G03-1", "protein_name": "Phosphopentomutase", "gene_name": "PGM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AT9-1", "protein_name": "Ribulose-phosphate 3-epimerase", "gene_name": "RPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2QD12-1", "protein_name": "Ribulose-phosphate 3-epimerase-like protein 1", "gene_name": "RPEL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49247-1", "protein_name": "Ribose-5-phosphate isomerase", "gene_name": 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Biol. Chem.", "date": "2000", "authors": "Perl A, Colombo E, Samoilova E, Butler M C, Banki K", "reference": { "type": "PubMed", "id": "10702296", "url": "https://pubmed.ncbi.nlm.nih.gov/10702296" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P37837", "url": "https://www.uniprot.org/uniprotkb/P37837" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10702296", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"Human" }, { "uniprot_canonical_ac": "Q06830-1", "protein_name": "Peroxiredoxin-1", "gene_name": "PRDX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11413-1", "protein_name": "Glucose-6-phosphate 1-dehydrogenase", "gene_name": "G6PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08263-1", "protein_name": "Glutathione S-transferase A1", "gene_name": "GSTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BYN0-1", "protein_name": "Sulfiredoxin-1", "gene_name": "SRXN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14867-1", "protein_name": "Transcription regulator protein BACH1", "gene_name": "BACH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15525-1", "protein_name": "Transcription factor MafG", "gene_name": "MAFG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16772-1", "protein_name": "Glutathione S-transferase A3", "gene_name": "GSTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48506-1", "protein_name": "Glutamate--cysteine ligase 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"protein_name": "Phosphopentomutase", "gene_name": "PGM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AT9-1", "protein_name": "Ribulose-phosphate 3-epimerase", "gene_name": "RPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2QD12-1", "protein_name": "Ribulose-phosphate 3-epimerase-like protein 1", "gene_name": "RPEL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49247-1", "protein_name": "Ribose-5-phosphate isomerase", "gene_name": "RPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHJ6-1", "protein_name": "Sedoheptulokinase", "gene_name": "SHPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H477-1", "protein_name": "Ribokinase", "gene_name": "RBKS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52209-1", "protein_name": "6-phosphogluconate dehydrogenase, decarboxylating", "gene_name": "PGD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y315-1", "protein_name": "Deoxyribose-phosphate aldolase", "gene_name": "DERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11413-1", "protein_name": "Glucose-6-phosphate 1-dehydrogenase", "gene_name": "G6PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29401-1", "protein_name": "Transketolase", "gene_name": "TKT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95336-1", "protein_name": "6-phosphogluconolactonase", "gene_name": "PGLS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P37837", "url": "https://www.uniprot.org/uniprotkb/P37837" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14988808", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proteome profiling of interleukin-12 treated human T helper cells.", "journal": "Proteomics", "date": "2005", "authors": "Rosengren AT, Nyman TA, Lahesmaa R", "reference": { "type": "PubMed", "id": "16038020", "url": "https://pubmed.ncbi.nlm.nih.gov/16038020" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13177-1", "protein_name": "Serine/threonine-protein kinase PAK 2", "gene_name": "PAK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61224-1", "protein_name": "Ras-related protein Rap-1b", "gene_name": "RAP1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P78417-1", "protein_name": "Glutathione S-transferase omega-1", "gene_name": "GSTO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01579-1", "protein_name": "Interferon gamma", "gene_name": "IFNG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20700-1", "protein_name": "Lamin-B1", "gene_name": "LMNB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13796-1", "protein_name": "Plastin-2", "gene_name": "LCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04179-1", "protein_name": "Superoxide dismutase [Mn], mitochondrial", "gene_name": "SOD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09661-1", "protein_name": "U2 small nuclear ribonucleoprotein A'", "gene_name": "SNRPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q53EL6-1", "protein_name": "Programmed cell death protein 4", "gene_name": "PDCD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14174-1", "protein_name": "Macrophage migration inhibitory factor", "gene_name": "MIF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00915-1", "protein_name": "Carbonic anhydrase 1", "gene_name": "CA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52907-1", "protein_name": "F-actin-capping protein subunit alpha-1", "gene_name": "CAPZA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00441-1", "protein_name": "Superoxide dismutase [Cu-Zn]", "gene_name": "SOD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62937-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A", "gene_name": "PPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14765-1", "protein_name": "Signal transducer and activator of transcription 4", "gene_name": "STAT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00170-1", "protein_name": "AH receptor-interacting protein", "gene_name": "AIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23528-1", "protein_name": "Cofilin-1", "gene_name": "CFL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11233-1", "protein_name": "Ras-related protein Ral-A", "gene_name": "RALA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60953-2", "protein_name": "Cell division control protein 42 homolog", "gene_name": "CDC42", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52597-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein F", "gene_name": "HNRNPF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07355-1", "protein_name": "Annexin A2", "gene_name": "ANXA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99439-1", "protein_name": "Calponin-2", "gene_name": "CNN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05120-1", "protein_name": "Plasminogen activator inhibitor 2", "gene_name": "SERPINB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00169-1", "protein_name": "Phosphatidylinositol transfer protein alpha isoform", "gene_name": "PITPNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL46-1", "protein_name": "Proteasome activator complex subunit 2", "gene_name": "PSME2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3K6-1", "protein_name": "BolA-like protein 2", "gene_name": "BOLA2-SMG1P6; BOLA2B; BOLA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05388-1", "protein_name": "Large ribosomal subunit protein uL10", "gene_name": "RPLP0", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13126-1", "protein_name": "S-methyl-5'-thioadenosine phosphorylase", "gene_name": "MTAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09210-1", "protein_name": "Glutathione S-transferase A2", "gene_name": "GSTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22626-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "HNRNPA2B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14979-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein D-like", "gene_name": "HNRNPDL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P37837", "url": "https://www.uniprot.org/uniprotkb/P37837" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16038020", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 37 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "CD8+ T cell-mediated HLA-A*0201-restricted cytotoxicity to transaldolase peptide 168-176 in patients with multiple sclerosis.", "journal": "Journal of immunology (Baltimore, Md. : 1950)", "date": "2005-12-15", "authors": "Niland Brian, Banki Katalin, Biddison William E, Perl Andras", "reference": { "type": "PubMed", "id": "16339578", "url": "https://pubmed.ncbi.nlm.nih.gov/16339578" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P37837", "url": "https://www.uniprot.org/uniprotkb/P37837" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16339578", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 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"Foxp3 controls regulatory T-cell function by interacting with AML1/Runx1.", "journal": "Nature", "date": "2007", "authors": "Ono M, Yaguchi H, Ohkura N, Kitabayashi I, Nagamura Y, Nomura T, Miyachi Y, Tsukada T, Sakaguchi S", "reference": { "type": "PubMed", "id": "17377532", "url": "https://pubmed.ncbi.nlm.nih.gov/17377532" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84077-1", "protein_name": "ADP-ribosylation factor 1", "gene_name": "ARF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13177-1", "protein_name": "Serine/threonine-protein kinase PAK 2", "gene_name": "PAK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13469-1", "protein_name": "Nuclear factor of 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"protein_name": "Interleukin-2 receptor subunit alpha", "gene_name": "IL2RA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZS1-1", "protein_name": "Forkhead box protein P3", "gene_name": "FOXP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99JB6-1", "protein_name": "Forkhead box protein P3", "gene_name": "Foxp3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P13796-1", "protein_name": "Plastin-2", "gene_name": "LCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04179-1", "protein_name": "Superoxide dismutase [Mn], mitochondrial", "gene_name": "SOD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09661-1", "protein_name": "U2 small nuclear ribonucleoprotein A'", "gene_name": "SNRPA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q53EL6-1", "protein_name": "Programmed cell death protein 4", "gene_name": "PDCD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P14174-1", "protein_name": "Macrophage migration inhibitory factor", "gene_name": "MIF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00915-1", "protein_name": "Carbonic anhydrase 1", "gene_name": "CA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01196-1", "protein_name": "Runt-related transcription factor 1", "gene_name": "RUNX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26038-1", "protein_name": "Moesin", "gene_name": "MSN", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52907-1", "protein_name": "F-actin-capping protein subunit alpha-1", "gene_name": "CAPZA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00441-1", "protein_name": "Superoxide dismutase [Cu-Zn]", "gene_name": "SOD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62937-1", "protein_name": "Peptidyl-prolyl cis-trans isomerase A", "gene_name": "PPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17987-1", "protein_name": "T-complex protein 1 subunit alpha", "gene_name": "TCP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14765-1", "protein_name": "Signal transducer and activator of transcription 4", "gene_name": "STAT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00170-1", "protein_name": "AH receptor-interacting protein", "gene_name": "AIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23528-1", "protein_name": "Cofilin-1", "gene_name": "CFL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11233-1", "protein_name": "Ras-related protein Ral-A", "gene_name": "RALA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60953-2", "protein_name": "Cell division control protein 42 homolog", "gene_name": "CDC42", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52597-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein F", "gene_name": "HNRNPF", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07355-1", "protein_name": "Annexin A2", "gene_name": "ANXA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17927-1", "protein_name": "Complement receptor type 1", "gene_name": "CR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99439-1", "protein_name": "Calponin-2", "gene_name": "CNN2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13761-1", "protein_name": "Runt-related transcription factor 3", "gene_name": "RUNX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22301-1", "protein_name": "Interleukin-10", "gene_name": "IL10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05120-1", "protein_name": "Plasminogen activator inhibitor 2", "gene_name": "SERPINB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13950-1", "protein_name": "Runt-related transcription factor 2", "gene_name": "RUNX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00169-1", "protein_name": "Phosphatidylinositol transfer protein alpha isoform", "gene_name": "PITPNA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UL46-1", "protein_name": "Proteasome activator complex subunit 2", "gene_name": "PSME2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16410-1", "protein_name": "Cytotoxic T-lymphocyte protein 4", "gene_name": "CTLA4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H3K6-1", "protein_name": "BolA-like protein 2", "gene_name": "BOLA2-SMG1P6; BOLA2B; BOLA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05388-1", "protein_name": "Large ribosomal subunit protein uL10", "gene_name": "RPLP0", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13126-1", "protein_name": "S-methyl-5'-thioadenosine phosphorylase", "gene_name": "MTAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09210-1", "protein_name": "Glutathione S-transferase A2", "gene_name": "GSTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22626-1", "protein_name": "Heterogeneous nuclear ribonucleoproteins A2/B1", "gene_name": "HNRNPA2B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14979-1", "protein_name": "Heterogeneous 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Loss of interaction with RUNX1 but no effect on interaction with NFATC2 and loss of its ability to regulate the expression of IL2, TNFRSF18, IL2RA and CTLA4 in a RUNX1-dependent manner; when associated with L-332.", "evidence": [ { "database": "UniProtKB", "id": "Q99JB6", "url": "https://www.uniprot.org/uniprotkb/Q99JB6" }, { "database": "PubMed", "id": "17377532", "url": "https://pubmed.ncbi.nlm.nih.gov/17377532" } ], "uniprot_canonical_ac": "Q99JB6-1" }, { "start_pos": 332, "end_pos": 332, "sequence_org": "K", "sequence_mut": "L", "comment": "Loss of interaction with RUNX1 but no effect on interaction with NFATC2 and loss of its ability to regulate the expression of IL2, TNFRSF18, IL2RA and CTLA4 in a RUNX1-dependent manner; when associated with 329-VH-330.", "evidence": [ { "database": "UniProtKB", "id": "Q99JB6", "url": "https://www.uniprot.org/uniprotkb/Q99JB6" }, { "database": "PubMed", "id": "17377532", "url": "https://pubmed.ncbi.nlm.nih.gov/17377532" } ], 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"count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification and characterization of human ribokinase and comparison of its properties with E. coli ribokinase and human adenosine kinase.", "journal": "FEBS letters", "date": "2007", "authors": "Park J, van Koeverden P, Singh B, Gupta RS", "reference": { "type": "PubMed", "id": "17585908", "url": "https://pubmed.ncbi.nlm.nih.gov/17585908" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G03-1", "protein_name": "Phosphopentomutase", "gene_name": "PGM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AT9-1", "protein_name": "Ribulose-phosphate 3-epimerase", "gene_name": "RPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2QD12-1", "protein_name": "Ribulose-phosphate 3-epimerase-like protein 1", "gene_name": "RPEL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49247-1", "protein_name": "Ribose-5-phosphate isomerase", "gene_name": "RPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHJ6-1", "protein_name": "Sedoheptulokinase", "gene_name": "SHPK", "tax_name": "Human" }, { "uniprot_canonical_ac": 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[9606]" } ], "record_id": "pubmed.17585908", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular identification of mammalian phosphopentomutase and glucose-1,6-bisphosphate synthase, two members of the alpha-D-phosphohexomutase family.", "journal": "The Journal of biological chemistry", "date": "2007", "authors": "Maliekal P, Sokolova T, Vertommen D, Veiga-da-Cunha M, Van Schaftingen E", "reference": { "type": "PubMed", "id": "17804405", "url": "https://pubmed.ncbi.nlm.nih.gov/17804405" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRR6-1", "protein_name": "ADP-dependent glucokinase", "gene_name": "ADPGK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15259-1", "protein_name": "Phosphoglycerate mutase 2", "gene_name": "PGAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NNW6-3", "protein_name": "Enolase 4", "gene_name": "ENO4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52789-1", "protein_name": "Hexokinase-2", "gene_name": "HK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G03-1", "protein_name": "Phosphopentomutase", "gene_name": "PGM2", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"GAPDH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49247-1", "protein_name": "Ribose-5-phosphate isomerase", "gene_name": "RPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHJ6-1", "protein_name": "Sedoheptulokinase", "gene_name": "SHPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14556-1", "protein_name": "Glyceraldehyde-3-phosphate dehydrogenase, testis-specific", "gene_name": "GAPDHS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17858-1", "protein_name": "ATP-dependent 6-phosphofructokinase, liver type", "gene_name": "PFKL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H477-1", "protein_name": "Ribokinase", "gene_name": "RBKS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52209-1", "protein_name": "6-phosphogluconate dehydrogenase, decarboxylating", "gene_name": "PGD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y315-1", "protein_name": "Deoxyribose-phosphate aldolase", "gene_name": "DERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09972-1", "protein_name": "Fructose-bisphosphate aldolase C", "gene_name": "ALDOC", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04075-1", "protein_name": "Fructose-bisphosphate aldolase A", "gene_name": "ALDOA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05062-1", "protein_name": "Fructose-bisphosphate aldolase B", "gene_name": "ALDOB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00558-1", "protein_name": "Phosphoglycerate kinase 1", "gene_name": "PGK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06744-1", "protein_name": "Glucose-6-phosphate isomerase", "gene_name": "GPI", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11413-1", "protein_name": "Glucose-6-phosphate 1-dehydrogenase", "gene_name": "G6PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52790-1", "protein_name": "Hexokinase-3", "gene_name": "HK3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08237-1", "protein_name": "ATP-dependent 6-phosphofructokinase, muscle type", "gene_name": "PFKM", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01813-1", "protein_name": "ATP-dependent 6-phosphofructokinase, platelet type", "gene_name": "PFKP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7TSV4-1", "protein_name": "Phosphopentomutase", "gene_name": "Pgm2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8CAA7-1", "protein_name": "Glucose 1,6-bisphosphate synthase", "gene_name": "Pgm2l1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6PCE3-1", "protein_name": "Glucose 1,6-bisphosphate synthase", "gene_name": "PGM2L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35557-1", "protein_name": "Hexokinase-4", "gene_name": "GCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46926-1", "protein_name": "Glucosamine-6-phosphate deaminase 1", "gene_name": "GNPDA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDQ7-1", "protein_name": "Glucosamine-6-phosphate deaminase 2", "gene_name": "GNPDA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19367-1", "protein_name": "Hexokinase-1", "gene_name": "HK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29401-1", "protein_name": "Transketolase", "gene_name": "TKT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09104-1", "protein_name": "Gamma-enolase", "gene_name": "ENO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13929-1", "protein_name": "Beta-enolase", "gene_name": "ENO3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06733-1", "protein_name": "Alpha-enolase", "gene_name": "ENO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95336-1", "protein_name": "6-phosphogluconolactonase", "gene_name": "PGLS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P37837", "url": "https://www.uniprot.org/uniprotkb/P37837" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": 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research", "date": "2012", "authors": "Hirotsu Y, Katsuoka F, Funayama R, Nagashima T, Nishida Y, Nakayama K, Engel JD, Yamamoto M", "reference": { "type": "PubMed", "id": "22965115", "url": "https://pubmed.ncbi.nlm.nih.gov/22965115" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16236-1", "protein_name": "Nuclear factor erythroid 2-related factor 2", "gene_name": "NFE2L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52209-1", "protein_name": "6-phosphogluconate dehydrogenase, decarboxylating", "gene_name": "PGD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11413-1", 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[] } ] }, { "title": "Novel association of early onset hepatocellular carcinoma with transaldolase deficiency.", "journal": "JIMD reports", "date": "2014", "authors": "Leduc CA, Crouch EE, Wilson A, Lefkowitch J, Wamelink MM, Jakobs C, Salomons GS, Sun X, Shen Y, Chung WK", "reference": { "type": "PubMed", "id": "24097415", "url": "https://pubmed.ncbi.nlm.nih.gov/24097415" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P37837", "url": "https://www.uniprot.org/uniprotkb/P37837" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24097415", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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6-phosphogluconolactonase in erythrocyte hexose monophosphate pathway metabolism.", "journal": "The Journal of laboratory and clinical medicine", "date": "1985", "authors": "Beutler E, Kuhl W", "reference": { "type": "PubMed", "id": "3932573", "url": "https://pubmed.ncbi.nlm.nih.gov/3932573" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G03-1", "protein_name": "Phosphopentomutase", "gene_name": "PGM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AT9-1", "protein_name": "Ribulose-phosphate 3-epimerase", "gene_name": "RPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2QD12-1", "protein_name": "Ribulose-phosphate 3-epimerase-like protein 1", "gene_name": "RPEL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49247-1", "protein_name": "Ribose-5-phosphate isomerase", "gene_name": "RPIA", "tax_name": "Human" }, { 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dehydrogenase from human erythrocytes.", "journal": "The Biochemical journal", "date": "1985", "authors": "Dallocchio F, Matteuzzi M, Bellini T", "reference": { "type": "PubMed", "id": "3994686", "url": "https://pubmed.ncbi.nlm.nih.gov/3994686" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G03-1", "protein_name": "Phosphopentomutase", "gene_name": "PGM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AT9-1", "protein_name": "Ribulose-phosphate 3-epimerase", "gene_name": "RPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2QD12-1", "protein_name": "Ribulose-phosphate 3-epimerase-like protein 1", "gene_name": "RPEL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49247-1", "protein_name": "Ribose-5-phosphate isomerase", "gene_name": "RPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHJ6-1", "protein_name": 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} ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.3994686", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", 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3-epimerase (RPE).", "journal": "Annals of human genetics", "date": "1980", "authors": "Spencer N, Hopkinson DA", "reference": { "type": "PubMed", "id": "7396409", "url": "https://pubmed.ncbi.nlm.nih.gov/7396409" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G03-1", "protein_name": "Phosphopentomutase", "gene_name": "PGM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AT9-1", "protein_name": "Ribulose-phosphate 3-epimerase", "gene_name": "RPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2QD12-1", "protein_name": "Ribulose-phosphate 3-epimerase-like protein 1", "gene_name": "RPEL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49247-1", "protein_name": "Ribose-5-phosphate isomerase", "gene_name": "RPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHJ6-1", "protein_name": "Sedoheptulokinase", "gene_name": 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A novel highly repetitive element constitutes an integral part of the coding sequence.", "journal": "J. Biol. Chem.", "date": "1994", "authors": "Banki K, Halladay D, Perl A", "reference": { "type": "PubMed", "id": "8300619", "url": "https://pubmed.ncbi.nlm.nih.gov/8300619" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G03-1", "protein_name": "Phosphopentomutase", "gene_name": "PGM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AT9-1", "protein_name": "Ribulose-phosphate 3-epimerase", "gene_name": "RPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2QD12-1", "protein_name": "Ribulose-phosphate 3-epimerase-like protein 1", "gene_name": "RPEL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49247-1", "protein_name": "Ribose-5-phosphate isomerase", "gene_name": "RPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHJ6-1", "protein_name": "Sedoheptulokinase", "gene_name": "SHPK", "tax_name": "Human" }, { 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"1996-12-20", "authors": "Banki K, Hutter E, Colombo E, Gonchoroff N J, Perl A", "reference": { "type": "PubMed", "id": "8955144", "url": "https://pubmed.ncbi.nlm.nih.gov/8955144" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P37837", "url": "https://www.uniprot.org/uniprotkb/P37837" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8955144", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ 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transketolase is essential for thiamine diphosphate-magnesium binding, and cofactor binding is required for dimer formation.", "journal": "Biochimica et biophysica acta", "date": "1997", "authors": "Wang JJ, Martin PR, Singleton CK", "reference": { "type": "PubMed", "id": "9357955", "url": "https://pubmed.ncbi.nlm.nih.gov/9357955" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37837-1", "protein_name": "Transaldolase", "gene_name": "TALDO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96G03-1", "protein_name": "Phosphopentomutase", "gene_name": "PGM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AT9-1", "protein_name": "Ribulose-phosphate 3-epimerase", "gene_name": "RPE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2QD12-1", "protein_name": "Ribulose-phosphate 3-epimerase-like protein 1", "gene_name": "RPEL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49247-1", "protein_name": "Ribose-5-phosphate isomerase", "gene_name": "RPIA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHJ6-1", "protein_name": "Sedoheptulokinase", "gene_name": "SHPK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H477-1", "protein_name": "Ribokinase", "gene_name": "RBKS", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52209-1", "protein_name": "6-phosphogluconate dehydrogenase, decarboxylating", "gene_name": "PGD", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y315-1", "protein_name": "Deoxyribose-phosphate aldolase", "gene_name": "DERA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11413-1", "protein_name": "Glucose-6-phosphate 1-dehydrogenase", "gene_name": "G6PD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29401-1", "protein_name": "Transketolase", "gene_name": "TKT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95336-1", "protein_name": "6-phosphogluconolactonase", "gene_name": "PGLS", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "6-Phosphogluconate dehydrogenase: the mechanism of action investigated by a comparison of the enzyme from different species.", "journal": "Biochimica et biophysica acta", "date": "1998", "authors": "Rippa M, Giovannini PP, Barrett MP, Dallocchio F, Hanau S", "reference": { "type": "PubMed", "id": "9920387", "url": 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Samantha C, Rees Johanna S, McStea Alexandra, Hirsch Michael, Wang Lin, Tynan Christopher J, Reed Matthew W, Irons Jennifer R, Butler Richard, Thompson Andrew J, Martin-Fernandez Marisa L, Huang Christopher L-H, Jackson Antony P", "reference": { "type": "PubMed", "id": "31950564", "url": "https://pubmed.ncbi.nlm.nih.gov/31950564" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NY72-1", "protein_name": "Sodium channel regulatory subunit beta-3", "gene_name": "SCN3B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NY72", "url": "https://www.uniprot.org/uniprotkb/Q9NY72" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.31950564", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Pathol.", "date": "2008", "authors": "Ivanova A V, Vortmeyer A, Ivanov S V, Nickerson M L, Maher E R, Lerman M I", "reference": { "type": "PubMed", "id": "17973242", "url": "https://pubmed.ncbi.nlm.nih.gov/17973242" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q12893-1", "protein_name": "Transmembrane protein 115", "gene_name": "TMEM115", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q12893", "url": "https://www.uniprot.org/uniprotkb/Q12893" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17973242", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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"journal": "Journal of immunotherapy (Hagerstown, Md. : 1997)", "date": "2022", "authors": "Loick SM, Frohlich A, Gabrielpillai J, Franzen A, Vogt TJ, Dietrich J, Wiek C, Scheckenbach K, Strieth S, Landsberg J, Dietrich D", "reference": { "type": "PubMed", "id": "34908008", "url": "https://pubmed.ncbi.nlm.nih.gov/34908008" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y5U5", "url": "https://www.uniprot.org/uniprotkb/Q9Y5U5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34908008", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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der Harst Erwin, Coene Peter Paul L O, Kliffen Mike, Gr\u00fcnhagen Dirk J, Verhoef Cornelis, IJzermans Jan N M, Kwekkeboom Jaap, Sprengers Dave", "reference": { "type": "PubMed", "id": "36155259", "url": "https://pubmed.ncbi.nlm.nih.gov/36155259" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y5U5", "url": "https://www.uniprot.org/uniprotkb/Q9Y5U5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36155259", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10204490", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Targeting of Ikaros to pericentromeric heterochromatin by direct DNA binding.", "journal": "Genes & development", "date": "2000", "authors": "Cobb BS, Morales-Alcelay S, Kleiger G, Brown KE, Fisher AG, Smale ST", "reference": { "type": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03267-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "Ikzf1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 152, "end_pos": 152, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 153, "end_pos": 153, "sequence_org": "F", "sequence_mut": "A", "comment": "Disrupts pericentromeric heterochromatin location. Partial cytoplasmic location. Abolishes DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 154, "end_pos": 154, "sequence_org": "T", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 155, "end_pos": 155, "sequence_org": "Q", "sequence_mut": "A", "comment": "Loss of pericentromeric heterochromatin location. Disrupted DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 156, "end_pos": 156, "sequence_org": "K", "sequence_mut": "A", "comment": "Disrupts pericentromeric heterochromatin location. Partial cytoplasmic location.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 157, "end_pos": 157, "sequence_org": "G", "sequence_mut": "A", "comment": "Loss of pericentromeric heterochromatin location. Disrupted DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 158, "end_pos": 158, "sequence_org": "N", "sequence_mut": "A", "comment": "Loss of pericentromeric heterochromatin location. Abolishes DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 159, "end_pos": 159, "sequence_org": "L", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 160, "end_pos": 160, "sequence_org": "L", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 161, "end_pos": 161, "sequence_org": "R", "sequence_mut": "A", "comment": "Disrupts pericentromeric heterochromatin location. Partial cytoplasmic location. Abolishes DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 173, "end_pos": 173, "sequence_org": "K", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 178, "end_pos": 178, "sequence_org": "N", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 179, "end_pos": 179, "sequence_org": "Y", "sequence_mut": "A", "comment": "Loss of pericentromeric heterochromatin location. Abolishes DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 180, "end_pos": 180, "sequence_org": "A", "sequence_mut": "L", "comment": "Loss of pericentromeric heterochromatin location. Disrupted DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 181, "end_pos": 181, "sequence_org": "C", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 182, "end_pos": 182, "sequence_org": "R", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 183, "end_pos": 183, "sequence_org": "R", "sequence_mut": "A", "comment": "Disrupts pericentromeric heterochromatin location. Partial cytoplasmic location. Abolishes DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 184, "end_pos": 184, "sequence_org": "R", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 185, "end_pos": 185, "sequence_org": "D", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. Disrupted DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 186, "end_pos": 186, "sequence_org": "A", "sequence_mut": "L", "comment": "No effect on pericentromeric heterochromatin location. Disrupted DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 187, "end_pos": 187, "sequence_org": "L", "sequence_mut": "A", "comment": "Loss of pericentromeric heterochromatin location. Abolishes DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 188, "end_pos": 188, "sequence_org": "T", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 189, "end_pos": 189, "sequence_org": "G", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 191, "end_pos": 191, "sequence_org": "L", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. Disrupted DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 192, "end_pos": 192, "sequence_org": "R", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" }, { "start_pos": 193, "end_pos": 193, "sequence_org": "T", "sequence_mut": "A", "comment": "No effect on pericentromeric heterochromatin location. No change in DNA binding.", "evidence": [ { "database": "UniProtKB", "id": "Q03267", "url": "https://www.uniprot.org/uniprotkb/Q03267" }, { "database": "PubMed", "id": "10970879", "url": "https://pubmed.ncbi.nlm.nih.gov/10970879" } ], "uniprot_canonical_ac": "Q03267-1" } ], "record_id": "pubmed.10970879", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Eos and pegasus, two members of the Ikaros family of proteins with distinct DNA binding activities.", "journal": "The Journal of biological chemistry", "date": "2000-12-08", "authors": "Perdomo J, Holmes M, Chong B, Crossley M", "reference": { "type": "PubMed", "id": "10978333", "url": "https://pubmed.ncbi.nlm.nih.gov/10978333" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H5V7-1", "protein_name": "Zinc finger protein Pegasus", "gene_name": "IKZF5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2S9-1", "protein_name": "Zinc finger protein Eos", "gene_name": "IKZF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10978333", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 61 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Combinatorial effects of splice variants modulate function of Aiolos.", "journal": "Journal of cell science", "date": "2007", "authors": "Caballero R, Setien F, Lopez-Serra L, Boix-Chornet M, Fraga MF, Ropero S, Megias D, Alaminos M, Sanchez-Tapia EM, Montoya MC, Esteller M, Gonzalez-Sarmiento R, Ballestar E", "reference": { "type": "PubMed", "id": "17646674", "url": "https://pubmed.ncbi.nlm.nih.gov/17646674" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17646674", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Structural and functional insights into the human B\u00f6rjeson-Forssman-Lehmann syndrome-associated protein PHF6.", "journal": "The Journal of biological chemistry", "date": "2014-04-04", "authors": "Liu Zhonghua, Li Fudong, Ruan Ke, Zhang Jiahai, Mei Yide, Wu Jihui, Shi Yunyu", "reference": { "type": "PubMed", "id": "24554700", "url": "https://pubmed.ncbi.nlm.nih.gov/24554700" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUJ5-1", "protein_name": "PWWP domain-containing protein 2B", "gene_name": "PWWP2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHZ7-1", "protein_name": "Methyl-CpG-binding domain protein 3-like 2", "gene_name": "MBD3L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63165-1", "protein_name": "Small ubiquitin-related modifier 1", "gene_name": "SUMO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWY6-1", "protein_name": "Methyl-CpG-binding domain protein 3-like 1", "gene_name": "MBD3L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96N64-1", "protein_name": "PWWP domain-containing protein 2A", "gene_name": "PWWP2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.24554700", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 65 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "NuRD-ZNF827 recruitment to telomeres creates a molecular scaffold for homologous recombination.", "journal": "Nature structural & molecular biology", "date": "2014", "authors": "Conomos D, Reddel RR, Pickett HA", "reference": { "type": "PubMed", "id": "25150861", "url": "https://pubmed.ncbi.nlm.nih.gov/25150861" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 3, "end_pos": 5, "sequence_org": "RRK", "sequence_mut": "", "comment": "Loss of function in NuRD complex recruitment to telomeric regions.", "evidence": [ { "database": "UniProtKB", "id": "Q17R98", "url": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Screen identifies bromodomain protein ZMYND8 in chromatin recognition of transcription-associated DNA damage that promotes homologous recombination.", "journal": "Genes & development", "date": "2015-01-15", "authors": "Gong Fade, Chiu Li-Ya, Cox Ben, Aymard Fran\u00e7ois, Clouaire Thomas, Leung Justin W, Cammarata Michael, Perez Mercedes, Agarwal Poonam, Brodbelt Jennifer S, Legube Ga\u00eblle, Miller Kyle M", "reference": { "type": "PubMed", "id": "25593309", "url": "https://pubmed.ncbi.nlm.nih.gov/25593309" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51531-1", "protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2", "gene_name": "SMARCA2", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIG0-1", "protein_name": "Tyrosine-protein kinase BAZ1B", "gene_name": "BAZ1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULI0-1", "protein_name": "ATPase family AAA domain-containing protein 2B", "gene_name": "ATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { 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"protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8M2-5", "protein_name": "Bromodomain-containing protein 9", "gene_name": "BRD9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { 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"uniprot_canonical_ac": "P21675-2", "protein_name": "Transcription initiation factor TFIID subunit 1", "gene_name": "TAF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15326-1", "protein_name": "Zinc finger MYND domain-containing protein 11", "gene_name": "ZMYND11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15016-1", "protein_name": "Tripartite motif-containing protein 66", "gene_name": "TRIM66", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRL2-1", "protein_name": "Bromodomain adjacent to zinc finger domain protein 1A", "gene_name": "BAZ1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q58F21-1", "protein_name": "Bromodomain testis-specific protein", "gene_name": "BRDT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UIF8-1", "protein_name": "Bromodomain adjacent to zinc finger domain protein 2B", "gene_name": "BAZ2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXF3-1", "protein_name": "Chromatin remodeling regulator CECR2", "gene_name": "CECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15164-1", "protein_name": "Transcription intermediary factor 1-alpha", "gene_name": "TRIM24", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": 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"database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 228, "end_pos": 228, "sequence_org": "N", "sequence_mut": "A", "comment": "Decreases interaction with histone H4ac.", "evidence": [ { "database": "UniProtKB", "id": "Q9ULU4", "url": "https://www.uniprot.org/uniprotkb/Q9ULU4" }, { "database": "PubMed", "id": "25593309", "url": "https://pubmed.ncbi.nlm.nih.gov/25593309" } ], "uniprot_canonical_ac": "Q9ULU4-1" } ], "record_id": "pubmed.25593309", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 98 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], 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"Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 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H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.27633282", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ZMYND8 Co-localizes with NuRD on Target Genes and Regulates Poly(ADP-Ribose)-Dependent Recruitment of GATAD2A/NuRD to Sites of DNA Damage.", "journal": "Cell reports", "date": "2016", "authors": "Spruijt CG, Luijsterburg MS, Menafra R, Lindeboom RG, Jansen PW, Edupuganti RR, Baltissen MP, Wiegant WW, Voelker-Albert MC, Matarese F, Mensinga A, Poser I, Vos HR, Stunnenberg HG, van Attikum H, Vermeulen M", "reference": { "type": "PubMed", "id": "27732854", "url": "https://pubmed.ncbi.nlm.nih.gov/27732854" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUJ5-1", "protein_name": "PWWP domain-containing protein 2B", "gene_name": "PWWP2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHZ7-1", "protein_name": "Methyl-CpG-binding domain protein 3-like 2", "gene_name": "MBD3L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63165-1", "protein_name": "Small ubiquitin-related modifier 1", "gene_name": "SUMO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": 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"P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { 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interactions within BRD4-chromatin complexes drive oncogenic megadomain formation in NUT midline carcinoma.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2017", "authors": "Alekseyenko AA, Walsh EM, Zee BM, Pakozdi T, Hsi P, Lemieux ME, Dal Cin P, Ince TA, Kharchenko PV, Kuroda MI, French CA", "reference": { "type": "PubMed", "id": "28484033", "url": "https://pubmed.ncbi.nlm.nih.gov/28484033" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28484033", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29042441", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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[] } ] }, { "title": "Structural and functional characterization of the RBBP4-ZNF827 interaction and its role in NuRD recruitment to telomeres.", "journal": "The Biochemical journal", "date": "2018", "authors": "Yang SF, Sun AA, Shi Y, Li F, Pickett HA", "reference": { "type": "PubMed", "id": "30045876", "url": "https://pubmed.ncbi.nlm.nih.gov/30045876" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Positive Regulation of Transcription by Human ZMYND8 through Its Association with P-TEFb Complex.", "journal": "Cell reports", "date": "2018-08-21", "authors": "Ghosh Koushik, Tang Ming, Kumari Nidhi, Nandy Arijit, Basu Subham, Mall Dheerendra Pratap, Rai Kunal, Biswas Debabrata", "reference": { "type": "PubMed", "id": "30134174", "url": "https://pubmed.ncbi.nlm.nih.gov/30134174" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94992-1", "protein_name": "Protein HEXIM1", "gene_name": "HEXIM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50750-1", "protein_name": "Cyclin-dependent kinase 9", "gene_name": "CDK9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHB7-1", "protein_name": "AF4/FMR2 family member 4", "gene_name": "AFF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60563-1", "protein_name": "Cyclin-T1", "gene_name": "CCNT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42568-1", "protein_name": "Protein AF-9", "gene_name": "MLLT3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.30134174", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 64 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TCF19 Promotes Cell Proliferation through Binding to the Histone H3K4me3 Mark.", "journal": "Biochemistry", "date": "2020", "authors": "Mondal P, Sen S, Klein BJ, Tiwary N, Gadad SS, Kutateladze TG, Roy S, Das C", "reference": { "type": "PubMed", "id": "31746185", "url": "https://pubmed.ncbi.nlm.nih.gov/31746185" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin 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"protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor 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"field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "NUT carcinoma of the parotid gland: report of two cases, one with a rare ZNF532-NUTM1 fusion.", "journal": "Virchows Archiv : an international journal of pathology", "date": "2022", "authors": "Chen M, Zhao S, Liang Z, Wang W, Zhou P, Jiang L", "reference": { "type": "PubMed", "id": "35064291", "url": "https://pubmed.ncbi.nlm.nih.gov/35064291" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35064291", "abstract": "", "glycosylation": [], 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Foxhead box D1 promotes the partial epithelial-to-mesenchymal transition of laryngeal squamous cell carcinoma cells via transcriptionally activating the expression of zinc finger protein 532.", "journal": "Bioengineered", "date": "2022", "authors": "Fan L, Wang J, Deng P, Wang Y, Zhang A, 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"Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36008597", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "circZNF532 promotes endothelial-to-mesenchymal transition in diabetic retinopathy by recruiting TAF15 to stabilize PIK3CD.", "journal": "Endocrine journal", "date": "2024-07-12", "authors": "Fu Xiao-Lin, He Fu-Tao, Li Mo-Han, Fu Chun-Yan, Chen Jian-Zhi", "reference": { "type": "PubMed", "id": "38811189", "url": "https://pubmed.ncbi.nlm.nih.gov/38811189" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92804-1", "protein_name": "TATA-binding protein-associated factor 2N", "gene_name": "TAF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00329-1", "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform", "gene_name": "PIK3CD", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38811189", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Ikaros gene encodes a family of functionally diverse zinc finger DNA-binding proteins.", "journal": "Molecular and cellular biology", "date": "1994", "authors": "Molnar A, Georgopoulos K", "reference": { "type": "PubMed", "id": "7969165", "url": "https://pubmed.ncbi.nlm.nih.gov/7969165" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7969165", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 59 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Helios, a T cell-restricted Ikaros family member that quantitatively associates with Ikaros at centromeric heterochromatin.", "journal": "Genes & development", "date": "1998-03-15", "authors": "Hahm K, Cobb B S, McCarty A S, Brown K E, Klug C A, Lee R, Akashi K, Weissman I L, Fisher A G, Smale S T", "reference": { "type": "PubMed", "id": "9512513", "url": "https://pubmed.ncbi.nlm.nih.gov/9512513" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9HCE3-1", "protein_name": "Zinc finger protein 532", "gene_name": "ZNF532", "tax_name": "Human" }, { "uniprot_canonical_ac": "P81183-1", "protein_name": "Zinc finger protein Helios", "gene_name": "Ikzf2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKS7-1", "protein_name": "Zinc finger protein Helios", "gene_name": "IKZF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y242-1", "protein_name": "Transcription factor 19", "gene_name": "TCF19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35558-1", "protein_name": "Phosphoenolpyruvate carboxykinase, cytosolic [GTP]", "gene_name": "PCK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin remodeler CHD4", "gene_name": "CHD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TDI0-1", "protein_name": "ATP-dependent chromatin remodeler CHD5", "gene_name": "CHD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35575-1", "protein_name": "Glucose-6-phosphatase catalytic subunit 1", "gene_name": "G6PC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1G0-1", "protein_name": "Zinc finger protein 687", "gene_name": "ZNF687", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24468-1", "protein_name": "COUP transcription factor 2", "gene_name": "NR2F2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULU4-1", "protein_name": "MYND-type zinc finger-containing chromatin reader ZMYND8", "gene_name": "ZMYND8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09467-1", "protein_name": "Fructose-1,6-bisphosphatase 1", "gene_name": "FBP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWS0-1", "protein_name": "PHD finger protein 6", "gene_name": "PHF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49116-1", "protein_name": "Nuclear receptor subfamily 2 group C member 2", "gene_name": "NR2C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q17R98-1", "protein_name": "Zinc finger protein 827", "gene_name": "ZNF827", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92610-1", "protein_name": "Zinc finger protein 592", "gene_name": "ZNF592", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13422-1", "protein_name": "DNA-binding protein Ikaros", "gene_name": "IKZF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKT9-1", "protein_name": "Zinc finger protein Aiolos", "gene_name": "IKZF3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9HCE3", "url": "https://www.uniprot.org/uniprotkb/Q9HCE3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9512513", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 60 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential expansion of zinc-finger transcription factor loci in homologous human and mouse gene clusters.", "journal": "Genome Res.", "date": "2003", "authors": "Shannon M, Hamilton AT, Gordon L, Branscomb E, Stubbs L", "reference": { "type": "PubMed", "id": "12743021", "url": "https://pubmed.ncbi.nlm.nih.gov/12743021" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8N7M2-1", "protein_name": "Zinc finger protein 283", "gene_name": "ZNF283", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK11-1", "protein_name": "Zinc finger protein 223", "gene_name": "ZNF223", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJW8-1", "protein_name": "Zinc finger protein 180", "gene_name": "ZNF180", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0VAW7-1", "protein_name": "Zinc finger protein 112", "gene_name": "Zfp112; Znf112", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9UK12-1", "protein_name": "Zinc finger protein 222", "gene_name": "ZNF222", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZL3-1", "protein_name": "Zinc finger protein 224", "gene_name": "ZNF224", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q2VY69-1", "protein_name": "Zinc finger protein 284", "gene_name": "ZNF284", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYT6-1", "protein_name": "Zinc finger protein 226", "gene_name": "ZNF226", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NK53-1", "protein_name": "Zinc finger protein 233", "gene_name": "ZNF233", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12901-1", "protein_name": "Zinc finger protein 155", "gene_name": "ZNF155", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK10-1", "protein_name": "Zinc finger protein 225", "gene_name": "ZNF225", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14588-1", "protein_name": "Zinc finger protein 234", "gene_name": "ZNF234", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJU3-1", "protein_name": "Zinc finger protein 112", "gene_name": "ZNF112", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UJW7-1", "protein_name": "Zinc finger protein 229", "gene_name": "ZNF229", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UK13-1", "protein_name": "Zinc finger protein 221", "gene_name": "ZNF221", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8N7M2", "url": "https://www.uniprot.org/uniprotkb/Q8N7M2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12743021", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]