[ { "title": "TMEM164 is an acyltransferase that forms ferroptotic C20:4 ether phospholipids.", "journal": "Nature chemical biology", "date": "2023-03", "authors": "Reed Alex, Ware Timothy, Li Haoxin, Fernando Bazan J, Cravatt Benjamin F", "reference": { "type": "PubMed", "id": "36782012", "url": "https://pubmed.ncbi.nlm.nih.gov/36782012" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q5U3C3-1", "protein_name": "Transmembrane protein 164", "gene_name": "TMEM164", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q5U3C3", "url": "https://www.uniprot.org/uniprotkb/Q5U3C3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36782012", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ 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"evidence": [ { "database": "UniProtKB", "id": "Q86W42", "url": "https://www.uniprot.org/uniprotkb/Q86W42" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23621916", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 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"Confirming the candidacy of THOC6 in the etiology of intellectual disability.", "journal": "American journal of medical genetics. Part A", "date": "2016", "authors": "Anazi S, Alshammari M, Moneis D, Abouelhoda M, Ibrahim N, Alkuraya FS", "reference": { "type": "PubMed", "id": "26739162", "url": "https://pubmed.ncbi.nlm.nih.gov/26739162" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86W42-1", "protein_name": "THO complex subunit 6", "gene_name": "THOC6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86W42", "url": "https://www.uniprot.org/uniprotkb/Q86W42" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26739162", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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[] } ] }, { "title": "Biallelic THOC6 pathogenic variants: Prenatal phenotype and review of the literature.", "journal": "Birth defects research", "date": "2022", "authors": "Ruaud L, Roux N, Boutaud L, Bessieres B, Ageorges F, Achaiaa A, Bole C, Nitschke P, Masson C, Vekemans M, Verloes A, Attie-Bitach T", "reference": { "type": "PubMed", "id": "35426486", "url": "https://pubmed.ncbi.nlm.nih.gov/35426486" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q86W42-1", "protein_name": "THO complex subunit 6", "gene_name": "THOC6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q86W42", "url": "https://www.uniprot.org/uniprotkb/Q86W42" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.35426486", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mutation of the novel gene Tmie results in sensory cell defects in the inner ear of spinner, a mouse model of human hearing loss DFNB6.", "journal": "Human molecular genetics", "date": "2002", "authors": "Mitchem KL, Hibbard E, Beyer LA, Bosom K, Dootz GA, Dolan DF, Johnson KR, Raphael Y, Kohrman DC", "reference": { "type": "PubMed", "id": "12140191", "url": "https://pubmed.ncbi.nlm.nih.gov/12140191" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8NEW7-1", "protein_name": "Transmembrane inner ear expressed protein", "gene_name": "TMIE", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q60I26-1", "protein_name": "ALS2 C-terminal-like protein", "gene_name": "Als2cl", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BLH5-1", "protein_name": "Probable threonine protease 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A founder TMIE mutation is a frequent cause of hearing loss in southeastern Anatolia.", "journal": "Clinical genetics", "date": "2009", "authors": "Sirmaci A, Ozturkmen-Akay H, Erbek S, Incesulu A, Duman D, Tasir-Yilmaz S, Ozdag H, Tekin M", "reference": { "type": "PubMed", "id": "19438934", "url": "https://pubmed.ncbi.nlm.nih.gov/19438934" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8NEW7-1", "protein_name": "Transmembrane inner ear expressed protein", "gene_name": "TMIE", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8NEW7", "url": "https://www.uniprot.org/uniprotkb/Q8NEW7" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19438934", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cloning of the novel gene TM6SF1 reveals conservation of clusters of paralogous genes between human chromosomes 15q24-q26 and 19p13.3-p12.", "journal": "Cytogenet. Cell Genet.", "date": "2000", "authors": "Carim-Todd L, Escarceller M, Estivill X, Sumoy L", "reference": { "type": "PubMed", "id": "11124529", "url": "https://pubmed.ncbi.nlm.nih.gov/11124529" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BZW4-1", "protein_name": "Transmembrane 6 superfamily member 2", "gene_name": "TM6SF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZW5-1", "protein_name": "Transmembrane 6 superfamily member 1", "gene_name": "TM6SF1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BZW4", "url": "https://www.uniprot.org/uniprotkb/Q9BZW4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11124529", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Exome-wide association study identifies a TM6SF2 variant that confers susceptibility to nonalcoholic fatty liver disease.", "journal": "Nature genetics", "date": "2014", "authors": "Kozlitina J, Smagris E, Stender S, Nordestgaard BG, Zhou HH, Tybjaerg-Hansen A, Vogt TF, Hobbs HH, Cohen JC", "reference": { "type": "PubMed", "id": "24531328", "url": "https://pubmed.ncbi.nlm.nih.gov/24531328" }, 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"journal": "Journal of hepatology", "date": "2015", "authors": "Zhou Y, Llaurado G, Oresic M, Hyotylainen T, Orho-Melander M, Yki-Jarvinen H", "reference": { "type": "PubMed", "id": "25457209", "url": "https://pubmed.ncbi.nlm.nih.gov/25457209" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BZW4-1", "protein_name": "Transmembrane 6 superfamily member 2", "gene_name": "TM6SF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BZW4", "url": "https://www.uniprot.org/uniprotkb/Q9BZW4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25457209", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", 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[] } ] }, { "title": "Basic and translational evidence supporting the role of TM6SF2 in VLDL metabolism.", "journal": "Current opinion in lipidology", "date": "2024-06-01", "authors": "Liu Jing, Ginsberg Henry N, Reyes-Soffer Gissette", "reference": { "type": "PubMed", "id": "38465912", "url": "https://pubmed.ncbi.nlm.nih.gov/38465912" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BZW4-1", "protein_name": "Transmembrane 6 superfamily member 2", "gene_name": "TM6SF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BZW4", "url": "https://www.uniprot.org/uniprotkb/Q9BZW4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38465912", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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Michael C, Schneider Kai Markus, Rader Daniel J, Schneider Carolin Victoria", "reference": { "type": "PubMed", "id": "38776916", "url": "https://pubmed.ncbi.nlm.nih.gov/38776916" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9BZW4-1", "protein_name": "Transmembrane 6 superfamily member 2", "gene_name": "TM6SF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75477-1", "protein_name": "Erlin-1", "gene_name": "ERLIN1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9BZW4", "url": "https://www.uniprot.org/uniprotkb/Q9BZW4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38776916", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], 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"uniprot_canonical_ac": "Q9JKK7-1", "protein_name": "Tropomodulin-2", "gene_name": "Tmod2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9JLH8-1", "protein_name": "Tropomodulin-4", "gene_name": "Tmod4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9NYL9-1", "protein_name": "Tropomodulin-3", "gene_name": "TMOD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9JHJ0-1", "protein_name": "Tropomodulin-3", "gene_name": "Tmod3", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZR1", "url": "https://www.uniprot.org/uniprotkb/Q9NZR1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10662549", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Hexavalent chromium causes centrosome amplification by inhibiting the binding between TMOD2 and NPM2.", "journal": "Toxicology letters", "date": "2023-03-22", "authors": "Zhao Meng Lu, Wang Jia Xin, Bian Xue Kai, Zhang Jun, Han Ya Wen, Xu Si Xian, Lee Shao Chin, Zhao Ji Zhong", "reference": { "type": "PubMed", "id": "36963620", "url": "https://pubmed.ncbi.nlm.nih.gov/36963620" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NZR1-1", "protein_name": "Tropomodulin-2", "gene_name": "TMOD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SE8-1", "protein_name": "Nucleoplasmin-2", "gene_name": "NPM2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NZR1", "url": "https://www.uniprot.org/uniprotkb/Q9NZR1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.36963620", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel activation-inducible protein of the tumor necrosis factor receptor superfamily and its ligand.", "journal": "J. Biol. Chem.", "date": "1999", "authors": "Kwon B, Yu KY, Ni J, Yu GL, Jang IK, Kim YJ, Xing L, Liu D, Wang SX, Kwon BS", "reference": { "type": "PubMed", "id": "10037686", "url": "https://pubmed.ncbi.nlm.nih.gov/10037686" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13077-1", "protein_name": "TNF receptor-associated factor 1", "gene_name": "TRAF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13114-1", "protein_name": "TNF receptor-associated factor 3", "gene_name": "TRAF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12933-1", "protein_name": "TNF receptor-associated factor 2", "gene_name": "TRAF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10037686", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a new member of the tumor necrosis factor family and its receptor, a human ortholog of mouse GITR.", "journal": "Curr. Biol.", "date": "1999", "authors": "Gurney AL, Marsters SA, Huang RM, Pitti RM, Mark DT, Baldwin DT, Gray AM, Dowd AD, Brush AD, Heldens AD, Schow AD, Goddard AD, Wood WI, Baker KP, Godowski PJ, Ashkenazi A", "reference": { "type": "PubMed", "id": "10074428", "url": "https://pubmed.ncbi.nlm.nih.gov/10074428" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20333-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1B", "gene_name": "TNFRSF1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32970-1", "protein_name": "CD70 antigen", "gene_name": "CD70", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92838-1", "protein_name": "Ectodysplasin-A", "gene_name": "EDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95407-1", "protein_name": "Tumor necrosis factor receptor superfamily member 6B", "gene_name": "TNFRSF6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07011-1", "protein_name": "Tumor necrosis factor receptor superfamily member 9", "gene_name": "TNFRSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95150-1", "protein_name": "Tumor necrosis factor ligand superfamily member 15", "gene_name": "TNFSF15", "tax_name": 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"uniprot_canonical_ac": "Q07011-1", "protein_name": "Tumor necrosis factor receptor superfamily member 9", "gene_name": "TNFRSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95150-1", "protein_name": "Tumor necrosis factor ligand superfamily member 15", "gene_name": "TNFSF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75888-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13", "gene_name": "TNFSF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41273-1", "protein_name": "Tumor necrosis factor ligand superfamily member 9", "gene_name": "TNFSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26842-1", "protein_name": "CD27 antigen", "gene_name": "CD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14836-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13B", "gene_name": "TNFRSF13B", "tax_name": 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"protein_name": "Tumor necrosis factor receptor superfamily member 4", "gene_name": "TNFRSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": 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nuclear factor-kappa B and c-Jun N-terminal kinase and modulates cell growth.", "journal": "Oncogene", "date": "1999", "authors": "Haridas V, Shrivastava A, Su J, Yu GL, Ni J, Liu D, Chen SF, Ni Y, Ruben SM, Gentz R, Aggarwal BB", "reference": { "type": "PubMed", "id": "10597252", "url": "https://pubmed.ncbi.nlm.nih.gov/10597252" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20333-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1B", "gene_name": "TNFRSF1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32970-1", "protein_name": "CD70 antigen", "gene_name": "CD70", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92838-1", "protein_name": "Ectodysplasin-A", "gene_name": "EDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95407-1", "protein_name": "Tumor necrosis factor receptor superfamily member 6B", "gene_name": "TNFRSF6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07011-1", "protein_name": "Tumor necrosis factor receptor superfamily member 9", "gene_name": "TNFRSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95150-1", "protein_name": "Tumor necrosis factor ligand superfamily member 15", "gene_name": 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"gene_name": "TNFRSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93038-1", "protein_name": "Tumor necrosis factor receptor superfamily member 25", "gene_name": "TNFRSF25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28908-1", "protein_name": "Tumor necrosis factor receptor superfamily member 8", "gene_name": "TNFRSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02223-1", "protein_name": "Tumor necrosis factor receptor superfamily member 17", "gene_name": "TNFRSF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23510-1", "protein_name": "Tumor necrosis factor ligand superfamily member 4", "gene_name": "TNFSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43489-1", "protein_name": "Tumor necrosis factor receptor superfamily member 4", "gene_name": "TNFRSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10597252", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41273-1", "protein_name": "Tumor necrosis factor ligand superfamily member 9", "gene_name": "TNFSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26842-1", "protein_name": "CD27 antigen", "gene_name": "CD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14836-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13B", "gene_name": "TNFRSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNE0-1", "protein_name": "Tumor necrosis factor receptor superfamily member EDAR", "gene_name": "EDAR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92956-1", "protein_name": "Tumor necrosis factor receptor superfamily member 14", "gene_name": "TNFRSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93038-1", "protein_name": "Tumor necrosis factor receptor superfamily member 25", "gene_name": "TNFRSF25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28908-1", "protein_name": "Tumor necrosis factor receptor superfamily member 8", "gene_name": "TNFRSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02223-1", "protein_name": "Tumor necrosis factor receptor superfamily member 17", "gene_name": "TNFRSF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23510-1", "protein_name": "Tumor necrosis factor ligand superfamily member 4", "gene_name": "TNFSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43489-1", "protein_name": "Tumor necrosis factor receptor superfamily member 4", "gene_name": "TNFRSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Q6-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11A", "gene_name": "TNFRSF11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10615125", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Biologically active APRIL is secreted following intracellular processing in the Golgi apparatus by furin convertase.", "journal": "EMBO reports", "date": "2001", "authors": "Lopez-Fraga M, Fernandez R, Albar JP, Hahne M", "reference": { "type": "PubMed", "id": "11571266", "url": "https://pubmed.ncbi.nlm.nih.gov/11571266" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": 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{ "uniprot_canonical_ac": "Q92838-1", "protein_name": "Ectodysplasin-A", "gene_name": "EDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95407-1", "protein_name": "Tumor necrosis factor receptor superfamily member 6B", "gene_name": "TNFRSF6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07011-1", "protein_name": "Tumor necrosis factor receptor superfamily member 9", "gene_name": "TNFRSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95150-1", "protein_name": "Tumor necrosis factor ligand superfamily member 15", "gene_name": "TNFSF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75888-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13", "gene_name": "TNFSF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41273-1", "protein_name": "Tumor necrosis factor ligand superfamily member 9", "gene_name": "TNFSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26842-1", "protein_name": "CD27 antigen", "gene_name": "CD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14836-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13B", "gene_name": "TNFRSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNE0-1", "protein_name": "Tumor necrosis factor receptor superfamily member EDAR", "gene_name": "EDAR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92956-1", "protein_name": "Tumor necrosis factor receptor superfamily member 14", "gene_name": "TNFRSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93038-1", "protein_name": "Tumor necrosis factor receptor superfamily member 25", "gene_name": "TNFRSF25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28908-1", "protein_name": "Tumor necrosis factor receptor superfamily member 8", "gene_name": "TNFRSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02223-1", "protein_name": "Tumor necrosis factor receptor superfamily member 17", "gene_name": "TNFRSF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23510-1", "protein_name": "Tumor necrosis factor ligand superfamily member 4", "gene_name": "TNFSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43489-1", "protein_name": "Tumor necrosis factor receptor superfamily member 4", "gene_name": "TNFRSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 101, "end_pos": 104, "sequence_org": "RKRR", "sequence_mut": "AKRA", "comment": "Abolishes proteolytic processing.", "evidence": [ { "database": "UniProtKB", "id": "O75888", "url": "https://www.uniprot.org/uniprotkb/O75888" }, { "database": "PubMed", "id": "11571266", "url": "https://pubmed.ncbi.nlm.nih.gov/11571266" } ], "uniprot_canonical_ac": "O75888-1" } ], "record_id": "pubmed.11571266", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a novel death domain-containing adaptor molecule for ectodysplasin-A receptor that is mutated in crinkled mice.", "journal": "Current biology : CB", "date": "2002", "authors": "Yan M, Zhang Z, Brady JR, Schilbach S, Fairbrother WJ, Dixit VM", "reference": { "type": "PubMed", "id": "11882293", "url": "https://pubmed.ncbi.nlm.nih.gov/11882293" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20333-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1B", "gene_name": "TNFRSF1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": 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{ "uniprot_canonical_ac": "P28908-1", "protein_name": "Tumor necrosis factor receptor superfamily member 8", "gene_name": "TNFRSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02223-1", "protein_name": "Tumor necrosis factor receptor superfamily member 17", "gene_name": "TNFRSF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23510-1", "protein_name": "Tumor necrosis factor ligand superfamily member 4", "gene_name": "TNFSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43489-1", "protein_name": "Tumor necrosis factor receptor superfamily member 4", "gene_name": "TNFRSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11882293", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" 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"count": 30 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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Md. : 1950)", "date": "2004", "authors": "Zingoni A, Sornasse T, Cocks BG, Tanaka Y, Santoni A, Lanier LL", "reference": { "type": "PubMed", "id": "15356117", "url": "https://pubmed.ncbi.nlm.nih.gov/15356117" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20333-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1B", 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"uniprot_canonical_ac": "O95150-1", "protein_name": "Tumor necrosis factor ligand superfamily member 15", "gene_name": "TNFSF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75888-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13", "gene_name": "TNFSF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41273-1", "protein_name": "Tumor necrosis factor ligand superfamily member 9", "gene_name": "TNFSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26842-1", "protein_name": "CD27 antigen", "gene_name": "CD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14836-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13B", "gene_name": "TNFRSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNE0-1", "protein_name": "Tumor necrosis factor receptor superfamily member EDAR", "gene_name": "EDAR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92956-1", "protein_name": "Tumor necrosis factor receptor superfamily member 14", "gene_name": "TNFRSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93038-1", "protein_name": "Tumor necrosis factor receptor superfamily member 25", "gene_name": "TNFRSF25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28908-1", "protein_name": "Tumor necrosis factor receptor superfamily member 8", "gene_name": "TNFRSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02223-1", "protein_name": "Tumor necrosis factor receptor superfamily member 17", "gene_name": "TNFRSF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23510-1", "protein_name": "Tumor necrosis factor ligand superfamily member 4", "gene_name": "TNFSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43489-1", "protein_name": "Tumor necrosis factor receptor superfamily member 4", "gene_name": "TNFRSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" 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biology", "date": "2007-07", "authors": "Tuyaerts Sandra, Van Meirvenne Sonja, Bonehill Aude, Heirman Carlo, Corthals Jurgen, Waldmann Herman, Breckpot Karine, Thielemans Kris, Aerts Joeri L", "reference": { "type": "PubMed", "id": "17449724", "url": "https://pubmed.ncbi.nlm.nih.gov/17449724" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17449724", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"https://pubmed.ncbi.nlm.nih.gov/17632511" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20333-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1B", "gene_name": "TNFRSF1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32970-1", "protein_name": "CD70 antigen", "gene_name": "CD70", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92838-1", "protein_name": "Ectodysplasin-A", "gene_name": "EDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95407-1", "protein_name": "Tumor necrosis factor receptor superfamily member 6B", "gene_name": "TNFRSF6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07011-1", "protein_name": "Tumor necrosis factor receptor superfamily member 9", "gene_name": "TNFRSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95150-1", "protein_name": "Tumor necrosis factor ligand superfamily member 15", "gene_name": "TNFSF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75888-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13", "gene_name": "TNFSF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41273-1", "protein_name": "Tumor necrosis factor ligand superfamily member 9", "gene_name": "TNFSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26842-1", "protein_name": "CD27 antigen", "gene_name": "CD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14836-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13B", "gene_name": "TNFRSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNE0-1", "protein_name": "Tumor necrosis factor receptor superfamily member EDAR", "gene_name": "EDAR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92956-1", "protein_name": "Tumor necrosis factor receptor superfamily member 14", "gene_name": "TNFRSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93038-1", "protein_name": "Tumor necrosis factor receptor superfamily member 25", "gene_name": "TNFRSF25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28908-1", "protein_name": "Tumor necrosis factor 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"Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17632511", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The TNF-family receptor DR3 is essential for diverse T cell-mediated inflammatory diseases.", "journal": "Immunity", "date": "2008", "authors": "Meylan F, Davidson TS, Kahle E, Kinder M, Acharya K, Jankovic D, Bundoc V, Hodges M, Shevach EM, Keane-Myers A, Wang EC, Siegel RM", "reference": { "type": "PubMed", "id": "18571443", "url": "https://pubmed.ncbi.nlm.nih.gov/18571443" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", 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"TNFRSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18571443", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"American journal of human genetics", "date": "2008", "authors": "Guerrini MM, Sobacchi C, Cassani B, Abinun M, Kilic SS, Pangrazio A, Moratto D, Mazzolari E, Clayton-Smith J, Orchard P, Coxon FP, Helfrich MH, Crockett JC, Mellis D, Vellodi A, Tezcan I, Notarangelo LD, Rogers MJ, Vezzoni P, Villa A, Frattini A", "reference": { "type": "PubMed", "id": "18606301", "url": "https://pubmed.ncbi.nlm.nih.gov/18606301" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20333-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1B", "gene_name": "TNFRSF1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32970-1", "protein_name": "CD70 antigen", "gene_name": "CD70", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92838-1", "protein_name": "Ectodysplasin-A", "gene_name": "EDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95407-1", "protein_name": "Tumor necrosis factor receptor superfamily member 6B", "gene_name": "TNFRSF6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07011-1", "protein_name": "Tumor necrosis factor receptor superfamily member 9", "gene_name": "TNFRSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95150-1", 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superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Q6-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11A", "gene_name": "TNFRSF11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18606301", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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ligand is unique among members of the tumor necrosis factor superfamily.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Won EY, Cha K, Byun JS, Kim DU, Shin S, Ahn B, Kim YH, Rice AJ, Walz T, Kwon BS, Cho HS", "reference": { "type": "PubMed", "id": "20032458", "url": "https://pubmed.ncbi.nlm.nih.gov/20032458" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20333-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1B", "gene_name": "TNFRSF1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32970-1", "protein_name": "CD70 antigen", "gene_name": "CD70", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92838-1", "protein_name": "Ectodysplasin-A", "gene_name": "EDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95407-1", "protein_name": "Tumor necrosis factor receptor superfamily member 6B", "gene_name": "TNFRSF6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07011-1", "protein_name": "Tumor necrosis factor receptor superfamily member 9", "gene_name": "TNFRSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95150-1", "protein_name": "Tumor necrosis factor ligand superfamily member 15", 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"OX40-OX40 ligand interaction in T-cell-mediated immunity and immunopathology.", "journal": "Advances in immunology", "date": "2010", "authors": "Ishii N, Takahashi T, Soroosh P, Sugamura K", "reference": { "type": "PubMed", "id": "20510730", "url": "https://pubmed.ncbi.nlm.nih.gov/20510730" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"uniprot_canonical_ac": "O75888-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13", "gene_name": "TNFSF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41273-1", "protein_name": "Tumor necrosis factor ligand superfamily member 9", "gene_name": "TNFSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26842-1", "protein_name": "CD27 antigen", "gene_name": "CD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14836-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13B", "gene_name": "TNFRSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNE0-1", "protein_name": "Tumor necrosis factor receptor superfamily member EDAR", "gene_name": "EDAR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92956-1", "protein_name": "Tumor necrosis factor receptor superfamily member 14", "gene_name": "TNFRSF14", "tax_name": 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"Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20510730", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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Faivre L, de Prost Y, Munnich A, Bonnefont JP, Bodemer C, Smahi A", "reference": { "type": "PubMed", "id": "20979233", "url": "https://pubmed.ncbi.nlm.nih.gov/20979233" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20333-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1B", "gene_name": "TNFRSF1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32970-1", "protein_name": "CD70 antigen", "gene_name": "CD70", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92838-1", "protein_name": "Ectodysplasin-A", "gene_name": "EDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95407-1", "protein_name": "Tumor necrosis factor receptor superfamily member 6B", "gene_name": "TNFRSF6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZT5-1", "protein_name": "Protein Wnt-10a", "gene_name": "WNT10A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07011-1", "protein_name": "Tumor necrosis factor receptor superfamily member 9", "gene_name": "TNFRSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95150-1", "protein_name": "Tumor necrosis factor ligand superfamily member 15", "gene_name": "TNFSF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75888-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13", "gene_name": "TNFSF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41273-1", "protein_name": "Tumor necrosis factor ligand superfamily member 9", "gene_name": "TNFSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26842-1", "protein_name": "CD27 antigen", "gene_name": "CD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14836-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13B", "gene_name": "TNFRSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNE0-1", "protein_name": "Tumor necrosis factor receptor superfamily member EDAR", "gene_name": "EDAR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92956-1", "protein_name": "Tumor necrosis factor receptor superfamily member 14", "gene_name": "TNFRSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93038-1", "protein_name": "Tumor necrosis factor receptor superfamily member 25", "gene_name": "TNFRSF25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28908-1", "protein_name": "Tumor necrosis factor receptor superfamily member 8", "gene_name": "TNFRSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02223-1", "protein_name": "Tumor necrosis factor receptor superfamily member 17", "gene_name": "TNFRSF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23510-1", "protein_name": "Tumor necrosis factor ligand superfamily member 4", "gene_name": "TNFSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43489-1", "protein_name": "Tumor necrosis factor receptor superfamily member 4", "gene_name": "TNFRSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20979233", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Decoy strategies: the structure of TL1A:DcR3 complex.", "journal": "Structure (London, England : 1993)", "date": "2011", "authors": "Zhan C, Patskovsky Y, Yan Q, Li Z, Ramagopal U, Cheng H, Brenowitz M, Hui X, Nathenson SG, Almo SC", "reference": { "type": "PubMed", "id": "21300286", "url": "https://pubmed.ncbi.nlm.nih.gov/21300286" }, "referenced_glycans": [], 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"gene_name": "TNFSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26842-1", "protein_name": "CD27 antigen", "gene_name": "CD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14836-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13B", "gene_name": "TNFRSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNE0-1", "protein_name": "Tumor necrosis factor receptor superfamily member EDAR", "gene_name": "EDAR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92956-1", "protein_name": "Tumor necrosis factor receptor superfamily member 14", "gene_name": "TNFRSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93038-1", "protein_name": "Tumor necrosis factor receptor superfamily member 25", "gene_name": "TNFRSF25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28908-1", "protein_name": "Tumor necrosis factor receptor superfamily member 8", "gene_name": "TNFRSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02223-1", 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Type I interferons drive the maturation of human DC3s with a distinct costimulatory profile characterized by high GITRL.", "journal": "Science immunology", "date": "2020", "authors": "Girard M, Law JC, Edilova MI, Watts TH", "reference": { "type": "PubMed", "id": "33188059", "url": "https://pubmed.ncbi.nlm.nih.gov/33188059" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.33188059", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structures of mouse and human GITR-GITRL complexes reveal unique TNF superfamily interactions.", "journal": "Nature communications", "date": "2021", "authors": "Wang F, Chau B, West SM, Kimberlin CR, Cao F, Schwarz F, Aguilar B, Han M, Morishige W, Bee C, Dollinger G, Rajpal A, Strop P", "reference": { "type": "PubMed", "id": "33654081", "url": "https://pubmed.ncbi.nlm.nih.gov/33654081" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a human OX-40 ligand, a costimulator of CD4+ T cells with homology to tumor necrosis factor.", "journal": "The Journal of experimental medicine", "date": "1994", "authors": "Godfrey WR, Fagnoni FF, Harara MA, Buck D, Engleman EG", "reference": { "type": "PubMed", "id": "7913952", "url": "https://pubmed.ncbi.nlm.nih.gov/7913952" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9UNG2-1", "protein_name": "Tumor necrosis factor ligand superfamily member 18", "gene_name": "TNFSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5U5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 18", "gene_name": "TNFRSF18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19438-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1A", "gene_name": "TNFRSF1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20333-1", "protein_name": "Tumor necrosis factor receptor superfamily member 1B", "gene_name": "TNFRSF1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32970-1", "protein_name": "CD70 antigen", "gene_name": "CD70", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92838-1", "protein_name": "Ectodysplasin-A", "gene_name": "EDA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95407-1", "protein_name": "Tumor necrosis factor receptor superfamily member 6B", "gene_name": "TNFRSF6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q07011-1", "protein_name": "Tumor necrosis factor receptor superfamily member 9", "gene_name": "TNFRSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95150-1", "protein_name": "Tumor necrosis factor ligand superfamily member 15", "gene_name": "TNFSF15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75888-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13", "gene_name": "TNFSF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P41273-1", "protein_name": "Tumor necrosis factor ligand superfamily member 9", "gene_name": "TNFSF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P26842-1", "protein_name": "CD27 antigen", "gene_name": "CD27", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14836-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13B", "gene_name": "TNFRSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNE0-1", "protein_name": "Tumor necrosis factor receptor superfamily member EDAR", "gene_name": "EDAR", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92956-1", "protein_name": "Tumor necrosis factor receptor superfamily member 14", "gene_name": "TNFRSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93038-1", "protein_name": "Tumor necrosis factor receptor superfamily member 25", "gene_name": "TNFRSF25", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28908-1", "protein_name": "Tumor necrosis factor receptor superfamily member 8", "gene_name": "TNFRSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02223-1", "protein_name": "Tumor necrosis factor receptor superfamily member 17", "gene_name": "TNFRSF17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23510-1", "protein_name": "Tumor necrosis factor ligand superfamily member 4", "gene_name": "TNFSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43489-1", "protein_name": "Tumor necrosis factor receptor superfamily member 4", "gene_name": "TNFRSF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAV5-1", "protein_name": "Tumor necrosis factor receptor superfamily member 27", "gene_name": "EDA2R", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7913952", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 28 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": 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"uniprot_canonical_ac": "Q8WWZ3-1", "protein_name": "Ectodysplasin-A receptor-associated adapter protein", "gene_name": "EDARADD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P32971-1", "protein_name": "Tumor necrosis factor ligand superfamily member 8", "gene_name": "TNFSF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00300-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11B", "gene_name": "TNFRSF11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9UNG2", "url": "https://www.uniprot.org/uniprotkb/Q9UNG2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8120384", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P29965-1", "protein_name": "CD40 ligand", "gene_name": "CD40LG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RJ3-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13C", "gene_name": "TNFRSF13C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13490-1", "protein_name": "Baculoviral IAP repeat-containing protein 2", "gene_name": "BIRC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP84-1", "protein_name": "Tumor necrosis factor receptor superfamily member 12A", "gene_name": "TNFRSF12A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13489-1", "protein_name": "Baculoviral IAP repeat-containing protein 3", "gene_name": "BIRC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36941-1", "protein_name": "Tumor necrosis factor receptor superfamily member 3", "gene_name": "LTBR", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43508-1", "protein_name": "Tumor necrosis factor ligand superfamily member 12", "gene_name": "TNFSF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06643-1", "protein_name": "Lymphotoxin-beta", "gene_name": "LTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99558-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 14", "gene_name": "MAP3K14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13114-1", "protein_name": "TNF receptor-associated factor 3", "gene_name": "TRAF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Q6-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11A", "gene_name": "TNFRSF11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12933-1", "protein_name": "TNF receptor-associated factor 2", "gene_name": "TRAF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y275", "url": "https://www.uniprot.org/uniprotkb/Q9Y275" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10085077", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 16 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TALL-1 is a novel member of the TNF family that is down-regulated by mitogens.", "journal": "J. Leukoc. Biol.", "date": "1999", "authors": "Shu H B, Hu W H, Johnson H", "reference": { "type": "PubMed", "id": "10331498", "url": "https://pubmed.ncbi.nlm.nih.gov/10331498" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75888-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13", "gene_name": "TNFSF13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y275", "url": "https://www.uniprot.org/uniprotkb/Q9Y275" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10331498", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "APRIL and TALL-I and receptors BCMA and TACI: system for regulating humoral immunity.", "journal": "Nature immunology", "date": "2000", "authors": "Yu G, Boone T, Delaney J, Hawkins N, Kelley M, Ramakrishnan M, McCabe S, Qiu WR, Kornuc M, Xia XZ, Guo J, Stolina M, Boyle WJ, Sarosi I, Hsu H, Senaldi G, Theill LE", "reference": { "type": "PubMed", "id": "10973284", "url": 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel TNF receptor family member binds TWEAK and is implicated in angiogenesis.", "journal": "Immunity", "date": "2001", "authors": "Wiley SR, Cassiano L, Lofton T, Davis-Smith T, Winkles JA, Lindner V, Liu H, Daniel TO, Smith CA, Fanslow WC", "reference": { "type": "PubMed", "id": "11728344", "url": "https://pubmed.ncbi.nlm.nih.gov/11728344" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29965-1", "protein_name": "CD40 ligand", "gene_name": "CD40LG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RJ3-1", "protein_name": "Tumor necrosis factor receptor superfamily 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Mol. Biol.", "date": "2002", "authors": "Karpusas Michael, Cachero Teresa G, Qian Fang, Boriack-Sjodin Ann, Mullen Colleen, Strauch Kathy, Hsu Yen-Ming, Kalled Susan L", "reference": { "type": "PubMed", "id": "11827482", "url": "https://pubmed.ncbi.nlm.nih.gov/11827482" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y275", "url": "https://www.uniprot.org/uniprotkb/Q9Y275" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11827482", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Biol.", "date": "2002", "authors": "Oren Deena A, Li Yuling, Volovik Yulia, Morris Tina S, Dharia Chhaya, Das Kalyan, Galperina Olga, Gentz Reiner, Arnold Eddy", "reference": { "type": "PubMed", "id": "11862220", "url": "https://pubmed.ncbi.nlm.nih.gov/11862220" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y275", "url": "https://www.uniprot.org/uniprotkb/Q9Y275" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11862220", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "DeltaBAFF, an alternate splice isoform that regulates receptor binding and biopresentation of the B cell survival cytokine, BAFF.", "journal": "J. Biol. Chem.", "date": "2003", "authors": "Gavin Amanda L, A\u00eft-Azzouzene Djemel, Ware Carl F, Nemazee David", "reference": { "type": "PubMed", "id": "12867412", "url": "https://pubmed.ncbi.nlm.nih.gov/12867412" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9WU72-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "Tnfsf13b", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y275", "url": "https://www.uniprot.org/uniprotkb/Q9Y275" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12867412", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "BAFF binding to T cell-expressed BAFF-R costimulates T cell proliferation and alloresponses.", "journal": "European journal of immunology", "date": "2004", "authors": "Ye Q, Wang L, Wells AD, Tao R, Han R, Davidson A, Scott ML, Hancock WW", "reference": { "type": "PubMed", "id": "15368291", "url": "https://pubmed.ncbi.nlm.nih.gov/15368291" }, "referenced_glycans": [], 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receptor superfamily member 11A", "gene_name": "TNFRSF11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12933-1", "protein_name": "TNF receptor-associated factor 2", "gene_name": "TRAF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y275", "url": "https://www.uniprot.org/uniprotkb/Q9Y275" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15585864", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 16 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", 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"field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An atypical tumor necrosis factor (TNF) receptor-associated factor-binding motif of B cell-activating factor belonging to the TNF family (BAFF) receptor mediates induction of the noncanonical NF-kappaB signaling pathway.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Morrison MD, Reiley W, Zhang M, Sun SC", "reference": { "type": "PubMed", "id": "15644327", "url": "https://pubmed.ncbi.nlm.nih.gov/15644327" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y275-1", "protein_name": "Tumor necrosis factor ligand superfamily member 13B", "gene_name": "TNFSF13B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43557-1", "protein_name": "Tumor necrosis factor ligand superfamily member 14", "gene_name": "TNFSF14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P29965-1", "protein_name": "CD40 ligand", "gene_name": "CD40LG", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01374-1", "protein_name": "Lymphotoxin-alpha", "gene_name": "LTA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RJ3-1", "protein_name": "Tumor necrosis factor receptor superfamily member 13C", "gene_name": "TNFRSF13C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13490-1", "protein_name": "Baculoviral IAP repeat-containing protein 2", "gene_name": "BIRC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP84-1", "protein_name": "Tumor necrosis factor receptor superfamily member 12A", "gene_name": "TNFRSF12A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13489-1", "protein_name": "Baculoviral IAP repeat-containing protein 3", "gene_name": "BIRC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P36941-1", "protein_name": "Tumor necrosis factor receptor superfamily member 3", "gene_name": "LTBR", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43508-1", "protein_name": "Tumor necrosis factor ligand superfamily member 12", "gene_name": "TNFSF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q06643-1", "protein_name": "Lymphotoxin-beta", "gene_name": "LTB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99558-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 14", "gene_name": "MAP3K14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13114-1", "protein_name": "TNF receptor-associated factor 3", "gene_name": "TRAF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14788-1", "protein_name": "Tumor necrosis factor ligand superfamily member 11", "gene_name": "TNFSF11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6Q6-1", "protein_name": "Tumor necrosis factor receptor superfamily member 11A", "gene_name": "TNFRSF11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12933-1", "protein_name": "TNF receptor-associated factor 2", "gene_name": "TRAF2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y275", "url": "https://www.uniprot.org/uniprotkb/Q9Y275" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15644327", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 16 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]