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Virol.", "date": "2003", "authors": "Johansen Lisa M, Deppmann Christopher D, Erickson Kimberly D, Coffin William F, Thornton Tina M, Humphrey Sean E, Martin Jennifer M, Taparowsky Elizabeth J", "reference": { "type": "PubMed", "id": "12719594", "url": "https://pubmed.ncbi.nlm.nih.gov/12719594" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q16520-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like", "gene_name": "BATF", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q16520", "url": "https://www.uniprot.org/uniprotkb/Q16520" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12719594", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcriptional analysis of HIV-specific CD8+ T cells shows that PD-1 inhibits T cell function by upregulating BATF.", "journal": "Nat. Med.", "date": "2010", "authors": "Quigley Michael, Pereyra Florencia, Nilsson Bj\u00f6rn, Porichis Filippos, Fonseca Catia, Eichbaum Quentin, Julg Boris, Jesneck Jonathan L, Brosnahan Kathleen, Imam Sabrina, Russell Kate, Toth Ildiko, Piechocka-Trocha Alicja, Dolfi Douglas, Angelosanto Jill, Crawford Alison, Shin Haina, Kwon Douglas S, Zupkosky Jennifer, Francisco Loise, Freeman Gordon J, Wherry E John, Kaufmann Daniel E, Walker Bruce D, Ebert Benjamin, Haining W Nicholas", "reference": { "type": "PubMed", "id": "20890291", "url": "https://pubmed.ncbi.nlm.nih.gov/20890291" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q16520-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like", "gene_name": "BATF", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q16520", "url": "https://www.uniprot.org/uniprotkb/Q16520" } ], "common_name": "Human", "glygen_name": 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "BATF is a major driver of NK cell epigenetic reprogramming and dysfunction in AML.", "journal": "Science translational medicine", "date": "2024-09-11", "authors": "Kumar Bijender, Singh Anand, Basar Rafet, Uprety Nadima, Li Ye, Fan Huihui, Cortes Ana Karen Nunez, Kaplan Mecit, Acharya Sunil, Shaim Hila, Xu Anna C, Wu Manrong, Ensley Emily, Fang Dexing, Banerjee Pinaki P, Garcia Luciana Melo, Tiberti Silvia, Lin Paul, Rafei Hind, Munir Maliha Nuzhat, Moore Madison, Shanley Mayra, Mendt Mayela, Kerbauy Lucila N, Liu Bin, Biederst\u00e4dt Alexander, Gokdemir Elif, Ghosh Susmita, Kundu Kiran, Reyes-Silva Francia, Jiang Xin Ru, Wan Xinhai, Gilbert April L, Dede Merve, Mohanty Vakul, Dou Jinzhuang, Zhang Patrick, Liu Enli, Muniz-Feliciano Luis, Deyter Gary M, Jain Abhinav K, Rodriguez-Sevilla Juan Jose, Colla Simona, Garcia-Manero Guillermo, Shpall Elizabeth J, Chen Ken, Abbas Hussein A, Rai Kunal, Rezvani Katayoun, Daher May", 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induced by human T-cell leukemia virus type I, is highly expressed in mature lymphocytes.", "journal": "Biochem. Biophys. Res. Commun.", "date": "1996", "authors": "Hasegawa H, Utsunomiya Y, Kishimoto K, Tange Y, Yasukawa M, Fujita S", "reference": { "type": "PubMed", "id": "8630063", "url": "https://pubmed.ncbi.nlm.nih.gov/8630063" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q16520-1", "protein_name": "Basic leucine zipper transcriptional factor ATF-like", "gene_name": "BATF", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q16520", "url": "https://www.uniprot.org/uniprotkb/Q16520" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8630063", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "IFP 35 forms complexes with B-ATF, a member of the AP1 family of transcription factors.", "journal": "Biochem. 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[] } ] }, { "title": "The autophagic membrane tether ATG2A transfers lipids between membranes.", "journal": "eLife", "date": "2019", "authors": "Maeda S, Otomo C, Otomo T", "reference": { "type": "PubMed", "id": "31271352", "url": "https://pubmed.ncbi.nlm.nih.gov/31271352" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q2TAZ0-1", "protein_name": "Autophagy-related protein 2 homolog A", "gene_name": "ATG2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y484-1", "protein_name": "WD repeat domain phosphoinositide-interacting protein 4", "gene_name": "WDR45", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5MNZ9-1", "protein_name": "WD repeat domain phosphoinositide-interacting protein 1", "gene_name": "WIPI1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q2TAZ0", "url": "https://www.uniprot.org/uniprotkb/Q2TAZ0" } ], "common_name": "Human", "glygen_name": "Human", 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Chem.", "date": "2004", "authors": "Quesada V\u00edctor, S\u00e1nchez Luis M, Alvarez Jes\u00fas, L\u00f3pez-Ot\u00edn Carlos", "reference": { "type": "PubMed", "id": "15087446", "url": "https://pubmed.ncbi.nlm.nih.gov/15087446" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6HA08-1", "protein_name": "Astacin-like metalloendopeptidase", "gene_name": "ASTL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6HA09-1", "protein_name": "Astacin-like metalloendopeptidase", "gene_name": "Astl", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6HA08", "url": "https://www.uniprot.org/uniprotkb/Q6HA08" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15087446", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Genet.", "date": "2003", "authors": "Bond Jacquelyn, Scott Sheila, Hampshire Daniel J, Springell Kelly, Corry Peter, Abramowicz Marc J, Mochida Ganesh H, Hennekam Raoul C M, Maher Eamonn R, Fryns Jean-Pierre, Alswaid Abdulrahman, Jafri Hussain, Rashid Yasmin, Mubaidin Ammar, Walsh Christopher A, Roberts Emma, Woods C Geoffrey", "reference": { "type": "PubMed", "id": "14574646", "url": "https://pubmed.ncbi.nlm.nih.gov/14574646" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IZT6-1", "protein_name": "Abnormal spindle-like microcephaly-associated protein", "gene_name": "ASPM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IZT6", "url": "https://www.uniprot.org/uniprotkb/Q8IZT6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.14574646", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": 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}, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Glycosaminoglycan-binding properties and aggrecanase activities of truncated ADAMTSs: comparative analyses with ADAMTS-5, -9, -16 and -18.", "journal": "Biochimica et biophysica acta", "date": "2006", "authors": "Zeng W, Corcoran C, Collins-Racie LA, Lavallie ER, Morris EA, Flannery CR", "reference": { "type": "PubMed", "id": "16507336", "url": "https://pubmed.ncbi.nlm.nih.gov/16507336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TE57-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 16", "gene_name": "ADAMTS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", "gene_name": "ADAMTS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8TE57", "url": "https://www.uniprot.org/uniprotkb/Q8TE57" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16507336", "abstract": "", "glycosylation": [], "mutagenesis": [], 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