[ { "title": "Genetic evidence for the expression of ATP- and GTP-specific succinyl-CoA synthetases in multicellular eucaryotes.", "journal": "J. Biol. Chem.", "date": "1998", "authors": "Johnson JD, Mehus JG, Tews K, Milavetz BI, Lambeth DO", "reference": { "type": "PubMed", "id": "9765291", "url": "https://pubmed.ncbi.nlm.nih.gov/9765291" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2R7-1", "protein_name": "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial", "gene_name": "SUCLA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13423-1", "protein_name": "NAD(P) transhydrogenase, mitochondrial", "gene_name": "NNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07954-1", "protein_name": "Fumarate hydratase, mitochondrial", "gene_name": "FH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51553-1", "protein_name": "Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial", "gene_name": "IDH3G; PDZD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75390-1", "protein_name": "Citrate synthase, mitochondrial", "gene_name": "CS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96I99-1", "protein_name": "Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial", "gene_name": "SUCLG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21912-1", "protein_name": "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial", "gene_name": "SDHB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14521-1", "protein_name": "Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial", "gene_name": "SDHD", "tax_name": "Human" }, { "uniprot_canonical_ac": "O97580-1", "protein_name": "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial", "gene_name": "SUCLA2", "tax_name": "Pig" }, { "uniprot_canonical_ac": "P40926-1", "protein_name": "Malate dehydrogenase, mitochondrial", "gene_name": "MDH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Z2I8-1", "protein_name": "Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial", "gene_name": "Suclg2", "tax_name": "Mouse" }, { 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dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial", "gene_name": "SDHD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40926-1", "protein_name": "Malate dehydrogenase, mitochondrial", "gene_name": "MDH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99643-1", "protein_name": "Succinate dehydrogenase cytochrome b560 subunit, mitochondrial", "gene_name": "SDHC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12931-1", "protein_name": "Heat shock protein 75 kDa, mitochondrial", "gene_name": "TRAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P31040-1", "protein_name": "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial", "gene_name": "SDHA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53597-1", "protein_name": "Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial", "gene_name": "SUCLG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43837-1", "protein_name": "Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial", "gene_name": "IDH3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48735-1", "protein_name": "Isocitrate dehydrogenase [NADP], mitochondrial", "gene_name": "IDH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50213-1", "protein_name": "Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial", "gene_name": "IDH3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99798-1", "protein_name": "Aconitate hydratase, mitochondrial", "gene_name": "ACO2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9P2R7", "url": "https://www.uniprot.org/uniprotkb/Q9P2R7" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9792106", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 17 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", 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Substrate channeling of oxaloacetate.", "journal": "The Journal of biological chemistry", "date": "1998", "authors": "Morgunov I, Srere PA", "reference": { "type": "PubMed", "id": "9792662", "url": "https://pubmed.ncbi.nlm.nih.gov/9792662" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2R7-1", "protein_name": "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial", "gene_name": "SUCLA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13423-1", "protein_name": "NAD(P) transhydrogenase, mitochondrial", "gene_name": "NNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07954-1", "protein_name": "Fumarate hydratase, mitochondrial", "gene_name": "FH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51553-1", "protein_name": "Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial", "gene_name": "IDH3G; PDZD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75390-1", "protein_name": "Citrate synthase, mitochondrial", 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"Human" }, { "uniprot_canonical_ac": "P31040-1", "protein_name": "Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial", "gene_name": "SDHA", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53597-1", "protein_name": "Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial", "gene_name": "SUCLG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43837-1", "protein_name": "Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial", "gene_name": "IDH3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48735-1", "protein_name": "Isocitrate dehydrogenase [NADP], mitochondrial", "gene_name": "IDH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50213-1", "protein_name": "Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial", "gene_name": "IDH3A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99798-1", "protein_name": "Aconitate hydratase, mitochondrial", "gene_name": "ACO2", "tax_name": "Human" } ], "species": [ { "name": "Homo 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[] } ] }, { "title": "Cloning and molecular analysis of the human citrate synthase gene.", "journal": "Genome", "date": "1998", "authors": "Goldenthal MJ, Marin-Garcia J, Ananthakrishnan R", "reference": { "type": "PubMed", "id": "9809442", "url": "https://pubmed.ncbi.nlm.nih.gov/9809442" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9P2R7-1", "protein_name": "Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial", "gene_name": "SUCLA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13423-1", "protein_name": "NAD(P) transhydrogenase, mitochondrial", "gene_name": "NNT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07954-1", "protein_name": "Fumarate hydratase, mitochondrial", "gene_name": "FH", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51553-1", "protein_name": "Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial", "gene_name": "IDH3G; PDZD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75390-1", "protein_name": "Citrate synthase, mitochondrial", "gene_name": "CS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96I99-1", "protein_name": "Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial", "gene_name": "SUCLG2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P21912-1", "protein_name": "Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial", "gene_name": "SDHB", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14521-1", "protein_name": "Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial", "gene_name": "SDHD", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40926-1", "protein_name": "Malate dehydrogenase, mitochondrial", "gene_name": "MDH2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99643-1", "protein_name": "Succinate dehydrogenase cytochrome b560 subunit, mitochondrial", "gene_name": "SDHC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12931-1", "protein_name": "Heat shock protein 75 kDa, 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Organization and assembly of the TRAPPII complex.", "journal": "Traffic", "date": "2011", "authors": "Choi C, Davey M, Schluter C, Pandher P, Fang Y, Foster LJ, Conibear E", "reference": { "type": "PubMed", "id": "21453443", "url": "https://pubmed.ncbi.nlm.nih.gov/21453443" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A5PLN9-1", "protein_name": "Trafficking protein particle complex subunit 13", "gene_name": "TRAPPC13", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "A5PLN9", "url": "https://www.uniprot.org/uniprotkb/A5PLN9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21453443", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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[] } ] }, { "title": "Molecular cloning and characterization of human VPS18, VPS11, VPS16, and VPS33.", "journal": "Gene", "date": "2001", "authors": "Huizing M, Didier A, Walenta J, Anikster Y, Gahl W A, Kr\u00e4mer H", "reference": { "type": "PubMed", "id": "11250079", "url": "https://pubmed.ncbi.nlm.nih.gov/11250079" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H269-1", "protein_name": "Vacuolar protein sorting-associated protein 16 homolog", "gene_name": "VPS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H267-1", "protein_name": "Vacuolar protein sorting-associated protein 33B", "gene_name": "VPS33B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H270-1", "protein_name": "Vacuolar protein sorting-associated protein 11 homolog", "gene_name": "VPS11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P253-1", "protein_name": "Vacuolar protein sorting-associated protein 18 homolog", "gene_name": "VPS18", "tax_name": "Human" } ], 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular characterization of mammalian homologues of class C Vps proteins that interact with syntaxin-7.", "journal": "The Journal of biological chemistry", "date": "2001", "authors": "Kim BY, Kramer H, Yamamoto A, Kominami E, Kohsaka S, Akazawa C", "reference": { "type": "PubMed", "id": "11382755", "url": "https://pubmed.ncbi.nlm.nih.gov/11382755" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H269-1", "protein_name": "Vacuolar protein sorting-associated protein 16 homolog", "gene_name": "VPS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q63615-1", "protein_name": "Vacuolar protein sorting-associated protein 33A", "gene_name": "Vps33a", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9H270-1", "protein_name": "Vacuolar protein sorting-associated protein 11 homolog", "gene_name": "VPS11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15400-1", "protein_name": "Syntaxin-7", 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7", "gene_name": "CLCN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86791-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog", "gene_name": "CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15118-1", "protein_name": "NPC intracellular cholesterol transporter 1", "gene_name": "NPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z2H8-1", "protein_name": "Proton-coupled amino acid transporter 1", "gene_name": "SLC36A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRA2-1", "protein_name": "Sialin", "gene_name": "SLC17A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10253-1", "protein_name": "Lysosomal alpha-glucosidase", "gene_name": "GAA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43567-1", "protein_name": "E3 ubiquitin-protein ligase RNF13", "gene_name": "RNF13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86WA9-1", "protein_name": "Sodium-independent sulfate anion transporter", "gene_name": "SLC26A11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NBJ9-1", "protein_name": "SID1 transmembrane family member 2", "gene_name": "SIDT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08962-1", "protein_name": "CD63 antigen", "gene_name": "CD63", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVJ2-1", "protein_name": "ADP-ribosylation factor-like protein 8B", "gene_name": "ARL8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BM9-1", "protein_name": "ADP-ribosylation factor-like protein 8A", "gene_name": "ARL8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13286-1", "protein_name": "Battenin", "gene_name": "CLN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY34-1", "protein_name": "Solute carrier family 15 member 3", "gene_name": "SLC15A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11279-1", "protein_name": "Lysosome-associated membrane glycoprotein 1", "gene_name": "LAMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96JC1-1", "protein_name": "Vam6/Vps39-like protein", "gene_name": "VPS39", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60931-1", "protein_name": "Cystinosin", "gene_name": "CTNS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZD2-1", "protein_name": "Equilibrative nucleoside transporter 3", "gene_name": "SLC29A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04062-1", "protein_name": "Lysosomal acid glucosylceramidase", "gene_name": "GBA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWB7-1", "protein_name": "Glycosylated lysosomal membrane protein", "gene_name": "GLMP", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13473-1", "protein_name": "Lysosome-associated membrane glycoprotein 2", "gene_name": "LAMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9GZU1-1", "protein_name": "Mucolipin-1", "gene_name": "MCOLN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BRI3-2", "protein_name": "Proton-coupled zinc antiporter SLC30A2", "gene_name": "SLC30A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NP78-1", "protein_name": "ABC-type oligopeptide transporter ABCB9", "gene_name": "ABCB9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NBI2-1", "protein_name": "Lysosomal membrane ascorbate-dependent ferrireductase CYB561A3", "gene_name": "CYB561A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H270-1", "protein_name": "Vacuolar protein sorting-associated protein 11 homolog", "gene_name": "VPS11", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2Q5-1", "protein_name": "Ragulator complex protein LAMTOR2", "gene_name": "LAMTOR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96DM3-1", "protein_name": "Regulator of MON1-CCZ1 complex", "gene_name": "RMC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14108-1", "protein_name": "Lysosome membrane protein 2", "gene_name": "SCARB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NRA0-1", "protein_name": "Sphingosine kinase 2", "gene_name": "SPHK2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P86790-1", "protein_name": "Vacuolar fusion protein CCZ1 homolog B", "gene_name": "CCZ1B; CCZ1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68CP4-1", "protein_name": "Heparan-alpha-glucosaminide N-acetyltransferase", "gene_name": "HGSNAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHS3-1", "protein_name": "Major facilitator superfamily domain-containing protein 8", "gene_name": "MFSD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P253-1", "protein_name": "Vacuolar protein sorting-associated protein 18 homolog", "gene_name": "VPS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15309-1", "protein_name": "Prostatic acid phosphatase", "gene_name": "ACP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IY95-1", "protein_name": "Transmembrane protein 192", "gene_name": "TMEM192", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H269", "url": "https://www.uniprot.org/uniprotkb/Q9H269" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17897319", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 38 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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complex to coordinate autophagosome maturation and endocytic trafficking.", "journal": "Nat. Cell Biol.", "date": "2008", "authors": "Liang Chengyu, Lee Jong-soo, Inn Kyung-soo, Gack Michaela U, Li Qinglin, Roberts Esteban A, Vergne Isabelle, Deretic Vojo, Feng Pinghui, Akazawa Chihiro, Jung Jae U", "reference": { "type": "PubMed", "id": "18552835", "url": "https://pubmed.ncbi.nlm.nih.gov/18552835" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H269-1", "protein_name": "Vacuolar protein sorting-associated protein 16 homolog", "gene_name": "VPS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AX1-1", "protein_name": "Vacuolar protein sorting-associated protein 33A", "gene_name": "VPS33A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2Y5-1", "protein_name": "UV radiation resistance-associated gene protein", "gene_name": "UVRAG", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P253-1", "protein_name": "Vacuolar protein sorting-associated protein 18 homolog", "gene_name": "VPS18", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9H269", "url": "https://www.uniprot.org/uniprotkb/Q9H269" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18552835", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Lysosomal trafficking, antigen presentation, and microbial killing are controlled by the Arf-like GTPase Arl8b.", "journal": "Immunity", "date": "2011", "authors": "Garg S, Sharma M, Ung C, Tuli A, Barral DC, Hava DL, Veerapen N, Besra GS, Hacohen N, Brenner MB", "reference": { "type": "PubMed", "id": "21802320", "url": "https://pubmed.ncbi.nlm.nih.gov/21802320" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H269-1", "protein_name": "Vacuolar protein sorting-associated protein 16 homolog", "gene_name": "VPS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49754-1", "protein_name": "Vacuolar protein sorting-associated protein 41 homolog", "gene_name": "VPS41", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NVJ2-1", "protein_name": "ADP-ribosylation factor-like protein 8B", "gene_name": "ARL8B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9CQW2-1", "protein_name": "ADP-ribosylation 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Alters chromosome segregation. Decreases interaction with VPS41. Loss of lysosomal location. Loss of interaction with PLEKHM1. Loss of interaction with RUFY3 and RUFY4.", "evidence": [ { "database": "UniProtKB", "id": "Q9NVJ2", "url": "https://www.uniprot.org/uniprotkb/Q9NVJ2" }, { "database": "PubMed", "id": "15331635", "url": "https://pubmed.ncbi.nlm.nih.gov/15331635" }, { "database": "PubMed", "id": "21802320", "url": "https://pubmed.ncbi.nlm.nih.gov/21802320" }, { "database": "PubMed", "id": "16650381", "url": "https://pubmed.ncbi.nlm.nih.gov/16650381" }, { "database": "PubMed", "id": "35314674", "url": "https://pubmed.ncbi.nlm.nih.gov/35314674" } ], "uniprot_canonical_ac": "Q9NVJ2-1" }, { "start_pos": 75, "end_pos": 75, "sequence_org": "Q", "sequence_mut": "L", "comment": "Prevents GTP hydrolysis, hence remains active. No effect on lysosomal location. Alters lysosomes cellular distribution and motility. Increases interaction with VPS41. No effect on interaction with PLEKHM1. Does not affect interaction with RUFY3 and RUFY4.", "evidence": [ { "database": "UniProtKB", "id": "Q9NVJ2", "url": "https://www.uniprot.org/uniprotkb/Q9NVJ2" }, { "database": "PubMed", "id": "16537643", "url": "https://pubmed.ncbi.nlm.nih.gov/16537643" }, { "database": "PubMed", "id": "21802320", "url": "https://pubmed.ncbi.nlm.nih.gov/21802320" }, { "database": "PubMed", "id": "28325809", "url": "https://pubmed.ncbi.nlm.nih.gov/28325809" }, { "database": "PubMed", "id": "16650381", "url": "https://pubmed.ncbi.nlm.nih.gov/16650381" }, { "database": "PubMed", "id": "35314674", "url": "https://pubmed.ncbi.nlm.nih.gov/35314674" } ], "uniprot_canonical_ac": "Q9NVJ2-1" } ], "record_id": "pubmed.21802320", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { 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Disrupts interaction with VPS18 and impairs endosome-lysosome fusion; when associated with K-441.", "evidence": [ { "database": "UniProtKB", "id": "Q96AX1", "url": "https://www.uniprot.org/uniprotkb/Q96AX1" }, { "database": "PubMed", "id": "25783203", "url": "https://pubmed.ncbi.nlm.nih.gov/25783203" }, { "database": "PubMed", "id": "23901104", "url": "https://pubmed.ncbi.nlm.nih.gov/23901104" } ], "uniprot_canonical_ac": "Q96AX1-1" }, { "start_pos": 441, "end_pos": 441, "sequence_org": "I", "sequence_mut": "K", "comment": "Disrupts interaction with VPS16. Disrupts interaction with VPS18 and impairs endosome-lysosome fusion; when associated with D-429. 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Recruitment of VPS33A to HOPS by VPS16 Is Required for Lysosome Fusion with Endosomes and Autophagosomes.", "journal": "Traffic (Copenhagen, Denmark)", "date": "2015", "authors": "Wartosch L, Gunesdogan U, Graham SC, Luzio JP", "reference": { "type": "PubMed", "id": "25783203", "url": "https://pubmed.ncbi.nlm.nih.gov/25783203" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9H269-1", "protein_name": "Vacuolar protein sorting-associated protein 16 homolog", "gene_name": 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repeated utilization of DNA transposons as regulators of diverse host functions.", "journal": "PLoS ONE", "date": "2013", "authors": "Hayward Alexander, Ghazal Awaisa, Andersson G\u00f6ran, Andersson Leif, Jern Patric", "reference": { "type": "PubMed", "id": "23533661", "url": "https://pubmed.ncbi.nlm.nih.gov/23533661" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6R2W3-1", "protein_name": "SCAN domain-containing protein 3", "gene_name": "SCAND3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96FA7-1", "protein_name": "Putative protein ZBED10P", "gene_name": "ZBED10P", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IZ13-1", "protein_name": "Protein FAM200C", "gene_name": "FAM200C", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6R2W3", "url": "https://www.uniprot.org/uniprotkb/Q6R2W3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": 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"journal": "Oncotarget", "date": "2017", "authors": "Zhang X, Zhou H, Zhang Y, Cai L, Jiang G, Li A, Miao Y, Li Q, Qiu X, Wang E", "reference": { "type": "PubMed", "id": "28418919", "url": "https://pubmed.ncbi.nlm.nih.gov/28418919" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6R2W3-1", "protein_name": "SCAN domain-containing protein 3", "gene_name": "SCAND3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6R2W3", "url": "https://www.uniprot.org/uniprotkb/Q6R2W3" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.28418919", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Genome-wide association study on blood pressure traits in the Iranian population suggests ZBED9 as a new locus for hypertension.", "journal": "Scientific reports", "date": "2021", "authors": "Kolifarhood G, Sabour S, Akbarzadeh M, Sedaghati-Khayat B, Guity K, Rasekhi Dehkordi S, Amiri Roudbar M, Hadaegh F, Azizi F, Daneshpour MS", "reference": { "type": "PubMed", "id": "34083597", "url": "https://pubmed.ncbi.nlm.nih.gov/34083597" }, "referenced_glycans": [], "referenced_proteins": [ { 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"Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "A0PJX2", "url": "https://www.uniprot.org/uniprotkb/A0PJX2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38593795", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "HE2 beta and HE2 gamma, new members of an epididymis-specific family of androgen-regulated proteins in the human.", "journal": "Endocrinology", "date": "2000", "authors": "Hamil K G, Sivashanmugam P, Richardson R T, Grossman G, Ruben S M, Mohler J L, Petrusz P, O'Rand M G, French F S, Hall S H", "reference": { "type": "PubMed", "id": "10698202", "url": "https://pubmed.ncbi.nlm.nih.gov/10698202" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6PDA7-1", "protein_name": "Sperm-associated antigen 11A", "gene_name": "SPAG11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08648-1", "protein_name": "Sperm-associated antigen 11B", "gene_name": "SPAG11A; SPAG11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6PDA7", "url": "https://www.uniprot.org/uniprotkb/Q6PDA7" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10698202", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Organization of the human gene encoding the epididymis-specific EP2 protein variants and its relationship to defensin genes.", "journal": "Biol. Reprod.", "date": "2001", "authors": "Fr\u00f6hlich O, Po C, Young L G", "reference": { "type": "PubMed", "id": "11259252", "url": "https://pubmed.ncbi.nlm.nih.gov/11259252" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q6PDA7-1", "protein_name": "Sperm-associated antigen 11A", "gene_name": "SPAG11A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08648-1", "protein_name": "Sperm-associated antigen 11B", "gene_name": "SPAG11A; SPAG11B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q6PDA7", "url": "https://www.uniprot.org/uniprotkb/Q6PDA7" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11259252", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { 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"n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "C-mannosylation and O-fucosylation of the thrombospondin type 1 module.", "journal": "The Journal of biological chemistry", "date": "2001", "authors": "Hofsteenge J, Huwiler KG, Macek B, Hess D, Lawler J, Mosher DF, Peter-Katalinic J", "reference": { "type": "PubMed", "id": "11067851", "url": "https://pubmed.ncbi.nlm.nih.gov/11067851" }, "referenced_glycans": [ { "glytoucan_ac": "G96881BQ" }, { "glytoucan_ac": "G44148BN" }, { "glytoucan_ac": "G61491DK" }, { "glytoucan_ac": "G06038KF" }, { "glytoucan_ac": "G70323CJ" }, { "glytoucan_ac": "G85196CF" } ], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C0I4-1", "protein_name": "Thrombospondin type-1 domain-containing protein 7B", "gene_name": "THSD7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2G5-3", "protein_name": "GDP-fucose protein O-fucosyltransferase 2", "gene_name": "POFUT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13591-1", "protein_name": "Semaphorin-5A", "gene_name": "SEMA5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVN8-1", "protein_name": "Somatomedin-B and thrombospondin type-1 domain-containing protein", "gene_name": "SBSPON", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2VEC9-1", "protein_name": "SCO-spondin", "gene_name": "SSPOP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P283-1", "protein_name": "Semaphorin-5B", "gene_name": "SEMA5B", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUD6-1", "protein_name": "Spondin-2", "gene_name": "SPON2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35442-1", "protein_name": "Thrombospondin-2", "gene_name": "THBS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMM2-1", "protein_name": "ADAMTS-like protein 5", "gene_name": "ADAMTSL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UY14-1", "protein_name": "ADAMTS-like protein 4", "gene_name": "ADAMTSL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6Y288-1", "protein_name": "Beta-1,3-glucosyltransferase", "gene_name": "B3GLCT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE59-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 19", "gene_name": "ADAMTS19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", "gene_name": "ADAMTS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75173-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 4", "gene_name": "ADAMTS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15072-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 3", "gene_name": "ADAMTS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXS8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 14", "gene_name": "ADAMTS14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "gene_name": "ADAMTS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKP4-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 7", "gene_name": "ADAMTS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKP5-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 6", "gene_name": "ADAMTS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP79-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 8", "gene_name": "ADAMTS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27918-1", "protein_name": "Properdin", "gene_name": "CFP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPZ6-1", "protein_name": "Thrombospondin type-1 domain-containing protein 7A", "gene_name": "THSD7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMP0-1", "protein_name": "Thrombospondin type-1 domain-containing protein 4", "gene_name": "THSD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS62-1", "protein_name": "Thrombospondin type-1 domain-containing protein 1", "gene_name": "THSD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCB6-1", "protein_name": "Spondin-1", 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"common_name": "Human", "glygen_name": "Human" }, "cell_line": {}, "uniprot_canonical_ac": "P07996-1" } ], "record_id": "pubmed.11067851", "abstract": "", "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 39 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "glytoucan_ac" ] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 23 }, { "field": "total_sites", "count": 9 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 5 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 4 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 4 }, { "field": "exact_sites", "count": 8 }, { "field": "exact_o_linked_sites", "count": 4 }, { "field": "exact_o_linked_glycan_sites", "count": 3 }, { "field": "exact_o_linked_glycans", "count": 4 }, { "field": "exact_c_linked_sites", "count": 4 }, { "field": "exact_c_linked_glycan_sites", "count": 4 }, { "field": "exact_c_linked_glycans", "count": 1 }, { "field": "fuzzy_sites", "count": 1 }, { "field": "fuzzy_o_linked_sites", "count": 1 }, { "field": "fuzzy_o_linked_glycan_sites", "count": 1 }, { "field": "fuzzy_o_linked_glycans", "count": 2 }, { "field": "fuzzy_c_linked_sites", "count": 1 }, { "field": "fuzzy_c_linked_glycan_sites", "count": 1 }, { "field": "fuzzy_c_linked_glycans", "count": 1 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac", "icn3d_view.label", "icn3d_view.url" ] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 7 }, { "field": "total_sites", "count": 7 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 3 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 7 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "exact_c_linked_sites", "count": 4 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac", "icn3d_view.label", "icn3d_view.url" ] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 15 }, { "field": "total_sites", "count": 8 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 4 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 4 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 4 }, { "field": "exact_sites", "count": 7 }, { "field": "exact_o_linked_sites", "count": 3 }, { "field": "exact_o_linked_glycan_sites", "count": 3 }, { "field": "exact_o_linked_glycans", "count": 4 }, { "field": "exact_c_linked_sites", "count": 4 }, { "field": "exact_c_linked_glycan_sites", "count": 4 }, { "field": "exact_c_linked_glycans", "count": 1 }, { "field": "fuzzy_sites", "count": 1 }, { "field": "fuzzy_o_linked_sites", "count": 1 }, { "field": "fuzzy_o_linked_glycan_sites", "count": 1 }, { "field": "fuzzy_o_linked_glycans", "count": 2 }, { "field": "fuzzy_c_linked_sites", "count": 1 }, { "field": "fuzzy_c_linked_glycan_sites", "count": 1 }, { "field": "fuzzy_c_linked_glycans", "count": 1 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac", "icn3d_view.label", "icn3d_view.url" ] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 1 }, { "field": "total_sites", "count": 1 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 1 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 }, { "field": "exact_sites", "count": 1 }, { "field": "exact_o_linked_sites", "count": 1 }, { "field": "fuzzy_sites", "count": 0 } ], "sort_fields": [ "glytoucan_ac", "type", "subtype", "site_category", "site_seq", "relation", "comment", "start_pos", "start_aa", "end_pos", "end_aa", "residue", "site_lbl", "mining_tool", "filter_code", "uniprot_canonical_ac", "icn3d_view.label", "icn3d_view.url" ] } ] }, { "title": "Two distinct pathways for O-fucosylation of epidermal growth factor-like or thrombospondin type 1 repeats.", "journal": "The Journal of biological chemistry", "date": "2006", "authors": "Luo Y, Nita-Lazar A, Haltiwanger RS", "reference": { "type": "PubMed", "id": "16464858", "url": "https://pubmed.ncbi.nlm.nih.gov/16464858" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C0I4-1", "protein_name": "Thrombospondin type-1 domain-containing protein 7B", "gene_name": "THSD7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2G5-3", "protein_name": "GDP-fucose protein O-fucosyltransferase 2", "gene_name": "POFUT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13591-1", "protein_name": "Semaphorin-5A", "gene_name": "SEMA5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVN8-1", "protein_name": "Somatomedin-B and thrombospondin type-1 domain-containing protein", "gene_name": "SBSPON", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2VEC9-1", "protein_name": "SCO-spondin", "gene_name": "SSPOP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P283-1", "protein_name": "Semaphorin-5B", "gene_name": "SEMA5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82987-1", "protein_name": "ADAMTS-like protein 3", "gene_name": "ADAMTSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58397-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 12", "gene_name": "ADAMTS12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P59510-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 20", "gene_name": "ADAMTS20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE56-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 17", "gene_name": "ADAMTS17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95450-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 2", "gene_name": "ADAMTS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76LX8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 13", "gene_name": "ADAMTS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TH1-1", "protein_name": "ADAMTS-like protein 2", "gene_name": "ADAMTSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE57-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 16", "gene_name": "ADAMTS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA0-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 5", "gene_name": "ADAMTS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H324-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 10", "gene_name": "ADAMTS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6G6-3", "protein_name": "ADAMTS-like protein 1", "gene_name": "ADAMTSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE58-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 15", "gene_name": "ADAMTS15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUD6-1", "protein_name": "Spondin-2", "gene_name": "SPON2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35442-1", "protein_name": "Thrombospondin-2", "gene_name": "THBS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMM2-1", "protein_name": "ADAMTS-like protein 5", "gene_name": "ADAMTSL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UY14-1", "protein_name": "ADAMTS-like protein 4", "gene_name": "ADAMTSL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6Y288-1", "protein_name": "Beta-1,3-glucosyltransferase", "gene_name": "B3GLCT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE59-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 19", "gene_name": "ADAMTS19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", "gene_name": "ADAMTS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75173-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 4", "gene_name": "ADAMTS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15072-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 3", "gene_name": "ADAMTS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXS8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 14", "gene_name": "ADAMTS14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "gene_name": "ADAMTS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKP4-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 7", "gene_name": "ADAMTS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKP5-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 6", "gene_name": "ADAMTS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP79-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 8", "gene_name": "ADAMTS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27918-1", "protein_name": "Properdin", "gene_name": "CFP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPZ6-1", "protein_name": "Thrombospondin type-1 domain-containing protein 7A", "gene_name": "THSD7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMP0-1", "protein_name": "Thrombospondin type-1 domain-containing protein 4", "gene_name": "THSD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS62-1", "protein_name": "Thrombospondin type-1 domain-containing protein 1", "gene_name": "THSD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCB6-1", "protein_name": "Spondin-1", "gene_name": "SPON1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9C0I4", "url": "https://www.uniprot.org/uniprotkb/Q9C0I4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16464858", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 39 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Peters'-plus syndrome is a congenital disorder of glycosylation caused by a defect in the beta1,3-glucosyltransferase that modifies thrombospondin type 1 repeats.", "journal": "Annals of medicine", "date": "2009", "authors": "Heinonen TY, Maki M", "reference": { "type": "PubMed", "id": "18720094", "url": "https://pubmed.ncbi.nlm.nih.gov/18720094" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C0I4-1", "protein_name": "Thrombospondin type-1 domain-containing protein 7B", "gene_name": "THSD7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13591-1", "protein_name": "Semaphorin-5A", "gene_name": "SEMA5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVN8-1", "protein_name": "Somatomedin-B and thrombospondin type-1 domain-containing protein", "gene_name": "SBSPON", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2VEC9-1", "protein_name": "SCO-spondin", "gene_name": "SSPOP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P283-1", "protein_name": "Semaphorin-5B", "gene_name": "SEMA5B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P82987-1", "protein_name": "ADAMTS-like protein 3", "gene_name": "ADAMTSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58397-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 12", "gene_name": "ADAMTS12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P59510-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 20", "gene_name": "ADAMTS20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE56-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 17", "gene_name": "ADAMTS17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95450-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 2", "gene_name": "ADAMTS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q76LX8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 13", "gene_name": "ADAMTS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TH1-1", "protein_name": "ADAMTS-like protein 2", "gene_name": "ADAMTSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE57-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 16", "gene_name": "ADAMTS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA0-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 5", "gene_name": "ADAMTS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H324-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 10", "gene_name": "ADAMTS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6G6-3", "protein_name": "ADAMTS-like protein 1", "gene_name": "ADAMTSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE58-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 15", "gene_name": "ADAMTS15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUD6-1", "protein_name": "Spondin-2", "gene_name": "SPON2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35442-1", "protein_name": "Thrombospondin-2", "gene_name": "THBS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMM2-1", "protein_name": "ADAMTS-like protein 5", "gene_name": "ADAMTSL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UY14-1", "protein_name": "ADAMTS-like protein 4", "gene_name": "ADAMTSL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6Y288-1", "protein_name": "Beta-1,3-glucosyltransferase", "gene_name": "B3GLCT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE59-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 19", "gene_name": "ADAMTS19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", 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"field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novel B3GALTL mutations in classic Peters plus syndrome and lack of mutations in a large cohort of patients with similar phenotypes.", "journal": "Clinical genetics", "date": "2014", "authors": "Weh E, Reis LM, Tyler RC, Bick D, Rhead WJ, Wallace S, McGregor TL, Dills SK, Chao MC, Murray JC, Semina EV", "reference": { "type": "PubMed", "id": "23889335", "url": 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metalloproteinase with thrombospondin motifs 4", "gene_name": "ADAMTS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15072-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 3", "gene_name": "ADAMTS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXS8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 14", "gene_name": "ADAMTS14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "gene_name": "ADAMTS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKP4-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 7", "gene_name": "ADAMTS7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKP5-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 6", "gene_name": "ADAMTS6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UP79-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 8", "gene_name": "ADAMTS8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P27918-1", "protein_name": "Properdin", "gene_name": "CFP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPZ6-1", "protein_name": "Thrombospondin type-1 domain-containing protein 7A", "gene_name": "THSD7A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMP0-1", "protein_name": "Thrombospondin type-1 domain-containing protein 4", "gene_name": "THSD4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS62-1", "protein_name": "Thrombospondin type-1 domain-containing protein 1", "gene_name": "THSD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCB6-1", "protein_name": "Spondin-1", "gene_name": "SPON1", "tax_name": "Human" } ], "species": [ { "name": "Homo 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[] } ] }, { "title": "Peters plus syndrome mutations disrupt a noncanonical ER quality-control mechanism.", "journal": "Current biology : CB", "date": "2015", "authors": "Vasudevan D, Takeuchi H, Johar SS, Majerus E, Haltiwanger RS", "reference": { "type": "PubMed", "id": "25544610", "url": "https://pubmed.ncbi.nlm.nih.gov/25544610" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9C0I4-1", "protein_name": "Thrombospondin type-1 domain-containing protein 7B", "gene_name": "THSD7B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y2G5-3", "protein_name": "GDP-fucose protein O-fucosyltransferase 2", "gene_name": "POFUT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13591-1", "protein_name": "Semaphorin-5A", "gene_name": "SEMA5A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IVN8-1", "protein_name": "Somatomedin-B and thrombospondin type-1 domain-containing protein", "gene_name": "SBSPON", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q76LX8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 13", "gene_name": "ADAMTS13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TH1-1", "protein_name": "ADAMTS-like protein 2", "gene_name": "ADAMTSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE57-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 16", "gene_name": "ADAMTS16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNA0-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 5", "gene_name": "ADAMTS5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H324-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 10", "gene_name": "ADAMTS10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N6G6-3", "protein_name": "ADAMTS-like protein 1", "gene_name": "ADAMTSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE58-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 15", "gene_name": "ADAMTS15", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07996-1", "protein_name": "Thrombospondin-1", "gene_name": "THBS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUD6-1", "protein_name": "Spondin-2", "gene_name": "SPON2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35442-1", "protein_name": "Thrombospondin-2", "gene_name": "THBS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZMM2-1", "protein_name": "ADAMTS-like protein 5", "gene_name": "ADAMTSL5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UY14-1", "protein_name": "ADAMTS-like protein 4", "gene_name": "ADAMTSL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6Y288-1", "protein_name": "Beta-1,3-glucosyltransferase", "gene_name": "B3GLCT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE59-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 19", "gene_name": "ADAMTS19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE60-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 18", "gene_name": "ADAMTS18", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75173-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 4", "gene_name": "ADAMTS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15072-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 3", "gene_name": "ADAMTS3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXS8-1", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 14", "gene_name": "ADAMTS14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N4-3", "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 9", "gene_name": "ADAMTS9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHI8-1", "protein_name": "A disintegrin and metalloproteinase with 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The dispanins: a novel gene family of ancient origin that contains 14 human members.", "journal": "PLoS ONE", "date": "2012", "authors": "Sallman Almen M, Bringeland N, Fredriksson R, Schioth HB", "reference": { "type": "PubMed", "id": "22363774", "url": "https://pubmed.ncbi.nlm.nih.gov/22363774" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "A6NDD5-1", "protein_name": "Synapse differentiation-inducing gene protein 1-like", "gene_name": "SYNDIG1L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZNR0-1", "protein_name": "Transmembrane protein 91", "gene_name": "TMEM91", "tax_name": "Human" }, { "uniprot_canonical_ac": "O35449-1", "protein_name": "Proline-rich transmembrane protein 1", "gene_name": "Prrt1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8BR26-1", "protein_name": "Interferon-induced transmembrane protein 10", "gene_name": "Ifitm10", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O88728-1", "protein_name": "Interferon-induced transmembrane protein 5", "gene_name": "Ifitm5", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q2MHH0-1", "protein_name": "Trafficking regulator of GLUT4 1", "gene_name": "Trarg1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q58DZ9-1", "protein_name": "Synapse differentiation-inducing gene protein 1", "gene_name": "Syndig1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q6MG82-1", "protein_name": "Proline-rich transmembrane protein 1", "gene_name": "Prrt1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q5TZE2-1", "protein_name": "Synapse differentiation-inducing gene protein 1-like", "gene_name": "syndig1l", "tax_name": "Zebrafish" }, { "uniprot_canonical_ac": "A4IFJ1-1", "protein_name": "Synapse differentiation-inducing gene protein 1-like", "gene_name": "SYNDIG1L", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "A6NNB3-1", "protein_name": "Interferon-induced transmembrane protein 5", "gene_name": "IFITM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99946-1", "protein_name": "Proline-rich transmembrane protein 1", "gene_name": "PRRT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8C838-1", "protein_name": "Trafficking regulator of GLUT4 1", "gene_name": "Trarg1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "E9PUL5-1", "protein_name": "Proline-rich transmembrane protein 2", "gene_name": "Prrt2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q3USQ7-1", "protein_name": "Synapse differentiation-inducing gene protein 1-like", "gene_name": "Syndig1l", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "D3Z1U7-1", "protein_name": "Transmembrane protein 233", "gene_name": "Tmem233", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P13164-1", "protein_name": "Interferon-induced transmembrane protein 1", "gene_name": "IFITM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6NMD0-1", "protein_name": "Interferon-induced transmembrane protein 10", "gene_name": "IFITM10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01629-1", "protein_name": "Interferon-induced transmembrane protein 2", "gene_name": "IFITM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z6L0-1", "protein_name": "Proline-rich transmembrane protein 2", "gene_name": "PRRT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99J93-1", "protein_name": "Interferon-induced transmembrane protein 2", "gene_name": "Ifitm2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9CQW9-1", "protein_name": "Interferon-induced transmembrane protein 3", "gene_name": "Ifitm3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "B4DJY2-1", "protein_name": "Transmembrane protein 233", "gene_name": "TMEM233", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IXB3-1", "protein_name": "Trafficking regulator of GLUT4 1", "gene_name": "TRARG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01628-1", "protein_name": "Interferon-induced transmembrane protein 3", "gene_name": "IFITM3", "tax_name": "Human" }, { "uniprot_canonical_ac": "C9JQL5-1", "protein_name": "Putative dispanin subfamily A member 2d", "gene_name": "", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7V2-1", "protein_name": "Synapse differentiation-inducing gene protein 1", "gene_name": "SYNDIG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08DM6-1", "protein_name": "Synapse differentiation-inducing gene protein 1", "gene_name": "SYNDIG1", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P26376-1", "protein_name": "Interferon-induced transmembrane protein 3", "gene_name": "Ifitm2; Ifitm6; ifitm3", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9D103-1", "protein_name": "Interferon-induced transmembrane protein 1", "gene_name": "Ifitm1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q8C581-1", "protein_name": "Transmembrane protein 91", "gene_name": "Tmem91", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "A2ANU3-1", "protein_name": "Synapse differentiation-inducing gene protein 1", "gene_name": "Syndig1", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "A6NDD5", "url": "https://www.uniprot.org/uniprotkb/A6NDD5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22363774", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 32 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "GLP-1: a novel zinc finger protein required in somatic cells of the gonad for germ cell development.", "journal": "Developmental biology", "date": "2007", "authors": "Li S, Lu MM, Zhou D, Hammes SR, Morrisey EE", "reference": { "type": "PubMed", "id": "16982049", "url": "https://pubmed.ncbi.nlm.nih.gov/16982049" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P0C6A0-2", "protein_name": "GATA-type zinc finger protein 1", "gene_name": "ZGLP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q1WG82-1", "protein_name": "GATA-type zinc finger protein 1", "gene_name": "Zglp1", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P0C6A0", "url": "https://www.uniprot.org/uniprotkb/P0C6A0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16982049", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Minor Contribution of Endogenous GLP-1 and GLP-2 to Postprandial Lipemia in Obese Men.", "journal": "PloS one", "date": "2016", "authors": "Matikainen N, Bjornson E, Soderlund S, Boren C, Eliasson B, Pietilainen KH, Bogl LH, Hakkarainen A, Lundbom N, Rivellese A, Riccardi G, Despres JP, Almeras N, Holst JJ, Deacon CF, Boren J, Taskinen MR", "reference": { "type": "PubMed", "id": "26752550", "url": "https://pubmed.ncbi.nlm.nih.gov/26752550" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P0C6A0-2", "protein_name": "GATA-type zinc finger protein 1", "gene_name": "ZGLP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P0C6A0", "url": "https://www.uniprot.org/uniprotkb/P0C6A0" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.26752550", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Large-scale identification and characterization of human genes that activate NF-kappaB and MAPK signaling pathways.", "journal": "Oncogene", "date": "2003", "authors": "Matsuda A, Suzuki Y, Honda G, Muramatsu S, Matsuzaki O, Nagano Y, Doi T, Shimotohno K, Harada T, Nishida E, Hayashi H, Sugano S", "reference": { "type": "PubMed", "id": "12761501", "url": "https://pubmed.ncbi.nlm.nih.gov/12761501" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y519-1", "protein_name": "Transmembrane protein 184B", "gene_name": "TMEM184B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z422-1", "protein_name": "SUZ RNA-binding domain-containing", "gene_name": "SZRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUH4-1", "protein_name": "Palmitoyltransferase ZDHHC13", "gene_name": "ZDHHC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q969V5-1", "protein_name": "Mitochondrial ubiquitin ligase activator of NFKB 1", "gene_name": "MUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z429-1", "protein_name": "Protein lifeguard 1", "gene_name": "GRINA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AX9-1", "protein_name": "E3 ubiquitin-protein ligase MIB2", "gene_name": "MIB2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75915-1", "protein_name": "PRA1 family protein 3", "gene_name": "ARL6IP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB61-1", "protein_name": "Adenosine 3'-phospho 5'-phosphosulfate transporter 1", "gene_name": "SLC35B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WVQ1-1", "protein_name": "Soluble calcium-activated nucleotidase 1", "gene_name": "CANT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96AW1-1", "protein_name": "WW domain binding protein VOPP1", "gene_name": "VOPP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75663-1", "protein_name": "TIP41-like protein", "gene_name": "TIPRL", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IK0-1", "protein_name": "Transmembrane protein 101", "gene_name": "TMEM101", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z434-1", "protein_name": "Mitochondrial antiviral-signaling protein", "gene_name": "MAVS", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96CG3-1", "protein_name": "TRAF-interacting protein with FHA domain-containing protein A", "gene_name": "TIFA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TCD1-1", "protein_name": "UPF0729 protein C18orf32", "gene_name": "C18orf32", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7LFL8-1", "protein_name": "CXXC-type zinc finger protein 5", "gene_name": "CXXC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P24390-1", "protein_name": "ER lumen protein-retaining receptor 1", "gene_name": "KDELR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3E0-1", "protein_name": "Vesicle transport protein GOT1B", "gene_name": "GOLT1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "B7ZAQ6-1", "protein_name": "Golgi pH regulator A", "gene_name": "GPHRA; GPR89A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43657-1", "protein_name": 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"TICAM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV92-1", "protein_name": "NEDD4 family-interacting protein 2", "gene_name": "NDFIP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BT67-1", "protein_name": "NEDD4 family-interacting protein 1", "gene_name": "NDFIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUC6-1", "protein_name": "TIR domain-containing adapter molecule 1", "gene_name": "TICAM1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P53990-1", "protein_name": "IST1 homolog", "gene_name": "IST1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUH5-1", "protein_name": "Palmitoyltransferase ZDHHC17", "gene_name": "ZDHHC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75689-1", "protein_name": "Arf-GAP with dual PH domain-containing protein 1", "gene_name": "ADAP1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y519", "url": 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cell carcinoma: functional role of microRNA-26a/b in the modulation of novel cancer pathways.", "journal": "British journal of cancer", "date": "2015", "authors": "Fukumoto I, Hanazawa T, Kinoshita T, Kikkawa N, Koshizuka K, Goto Y, Nishikawa R, Chiyomaru T, Enokida H, Nakagawa M, Okamoto Y, Seki N", "reference": { "type": "PubMed", "id": "25668004", "url": "https://pubmed.ncbi.nlm.nih.gov/25668004" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y519-1", "protein_name": "Transmembrane protein 184B", "gene_name": "TMEM184B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y519", "url": "https://www.uniprot.org/uniprotkb/Q9Y519" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.25668004", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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} ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P52741", "url": "https://www.uniprot.org/uniprotkb/P52741" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7557990", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 15 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": 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protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15265-1", "protein_name": "Ataxin-7", "gene_name": "ATXN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EZ8-1", "protein_name": "Microspherule protein 1", "gene_name": "MCRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYH5-1", "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "ZZZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51610-1", "protein_name": "Host cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR8-1", "protein_name": "Inhibitor of growth protein 3", "gene_name": "ING3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV56-1", "protein_name": "MRG/MORF4L-binding protein", "gene_name": "MRGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8E8-1", "protein_name": "Cysteine-rich protein 2-binding protein", "gene_name": "KAT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15906-1", "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "VPS72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS73-1", "protein_name": "MAP3K12-binding inhibitory protein 1", "gene_name": "MBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y265-1", "protein_name": "RuvB-like 1", "gene_name": "RUVBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9L4-1", "protein_name": "KAT8 regulatory NSL complex subunit 2", "gene_name": "KANSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N6-1", "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "KANSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y2-1", "protein_name": "MSL complex subunit 3", "gene_name": "MSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7Z6-1", "protein_name": "Histone acetyltransferase KAT8", "gene_name": "KAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 2-F", "gene_name": "H2BC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15294-1", "protein_name": "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit", "gene_name": "OGT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 1-A", "gene_name": "H2AC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10786633", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 108 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ATF-2 has intrinsic histone acetyltransferase activity which is modulated by phosphorylation.", "journal": "Nature", "date": "2000", "authors": "Kawasaki H, Schiltz L, Chiu R, Itakura K, Taira K, Nakatani Y, Yokoyama KK", "reference": { "type": "PubMed", "id": "10821277", "url": "https://pubmed.ncbi.nlm.nih.gov/10821277" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULM3-1", "protein_name": "YEATS domain-containing protein 2", "gene_name": "YEATS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15014-1", "protein_name": "Mortality factor 4-like protein 2", "gene_name": "MORF4L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15265-1", "protein_name": "Ataxin-7", "gene_name": "ATXN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EZ8-1", "protein_name": "Microspherule protein 1", "gene_name": "MCRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYH5-1", "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "ZZZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51610-1", "protein_name": "Host cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR8-1", "protein_name": "Inhibitor of growth protein 3", "gene_name": "ING3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV56-1", "protein_name": "MRG/MORF4L-binding protein", "gene_name": "MRGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8E8-1", "protein_name": "Cysteine-rich protein 2-binding protein", "gene_name": "KAT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15906-1", "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "VPS72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS73-1", "protein_name": "MAP3K12-binding inhibitory protein 1", "gene_name": "MBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y265-1", "protein_name": "RuvB-like 1", "gene_name": "RUVBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9L4-1", "protein_name": "KAT8 regulatory NSL complex subunit 2", "gene_name": "KANSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N6-1", "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "KANSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y2-1", "protein_name": "MSL complex subunit 3", "gene_name": "MSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7Z6-1", "protein_name": "Histone acetyltransferase KAT8", "gene_name": "KAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 2-F", "gene_name": "H2BC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15294-1", "protein_name": "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit", "gene_name": "OGT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 1-A", "gene_name": "H2AC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 69, "end_pos": 69, "sequence_org": "T", "sequence_mut": "A", "comment": "Weak histone acetyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "P15336", "url": "https://www.uniprot.org/uniprotkb/P15336" }, { "database": "PubMed", "id": "10821277", "url": "https://pubmed.ncbi.nlm.nih.gov/10821277" } ], "uniprot_canonical_ac": "P15336-1" }, { "start_pos": 71, "end_pos": 71, "sequence_org": "T", "sequence_mut": "A", "comment": "Impairs phosphorylation by PLK3. Weak histone acetyltransferase activity.", "evidence": [ { "database": "UniProtKB", "id": "P15336", "url": "https://www.uniprot.org/uniprotkb/P15336" }, { "database": "PubMed", "id": "10821277", "url": "https://pubmed.ncbi.nlm.nih.gov/10821277" }, { "database": "PubMed", "id": "21098032", "url": "https://pubmed.ncbi.nlm.nih.gov/21098032" } ], "uniprot_canonical_ac": "P15336-1" } ], "record_id": "pubmed.10821277", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 108 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Human STAGA complex is a chromatin-acetylating transcription coactivator that interacts with pre-mRNA splicing and DNA damage-binding factors in vivo.", "journal": "Mol. Cell. Biol.", "date": "2001", "authors": "Martinez E, Palhan V B, Tjernberg A, Lymar E S, Gamper A M, Kundu T K, Chait B T, Roeder R G", "reference": { "type": "PubMed", "id": "11564863", "url": "https://pubmed.ncbi.nlm.nih.gov/11564863" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15393-1", "protein_name": "Splicing factor 3B subunit 3", "gene_name": "SF3B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11564863", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Novel subunits of the TATA binding protein free TAFII-containing transcription complex identified by matrix-assisted laser desorption/ionization-time of flight mass spectrometry following one-dimensional gel electrophoresis.", "journal": "Proteomics", "date": "2003", "authors": "Cavusoglu N, Brand M, Tora L, Van Dorsselaer A", "reference": { "type": "PubMed", "id": "12601814", "url": "https://pubmed.ncbi.nlm.nih.gov/12601814" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49848-1", "protein_name": "Transcription initiation factor TFIID subunit 6", "gene_name": "TAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P1X5-1", "protein_name": "Transcription initiation factor TFIID subunit 2", "gene_name": "TAF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00268-1", "protein_name": "Transcription initiation factor TFIID subunit 4", "gene_name": "TAF4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15542-1", "protein_name": "Transcription initiation factor TFIID subunit 5", "gene_name": "TAF5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12601814", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Gene expression signatures identify rhabdomyosarcoma subtypes and detect a novel t(2;2)(q35;p23) translocation fusing PAX3 to NCOA1.", "journal": "Cancer research", "date": "2004", "authors": "Wachtel M, Dettling M, Koscielniak E, Stegmaier S, Treuner J, Simon-Klingenstein K, Buhlmann P, Niggli FK, Schafer BW", "reference": { "type": "PubMed", "id": "15313887", "url": "https://pubmed.ncbi.nlm.nih.gov/15313887" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULM3-1", "protein_name": "YEATS domain-containing protein 2", "gene_name": "YEATS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15014-1", "protein_name": "Mortality factor 4-like protein 2", "gene_name": "MORF4L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15265-1", "protein_name": "Ataxin-7", "gene_name": "ATXN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EZ8-1", "protein_name": "Microspherule protein 1", "gene_name": "MCRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYH5-1", "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "ZZZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51610-1", "protein_name": "Host cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR8-1", "protein_name": "Inhibitor of growth protein 3", "gene_name": "ING3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV56-1", "protein_name": "MRG/MORF4L-binding protein", "gene_name": "MRGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8E8-1", "protein_name": "Cysteine-rich protein 2-binding protein", "gene_name": "KAT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15906-1", "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "VPS72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS73-1", "protein_name": "MAP3K12-binding inhibitory protein 1", "gene_name": "MBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y265-1", "protein_name": "RuvB-like 1", "gene_name": "RUVBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9L4-1", "protein_name": "KAT8 regulatory NSL complex subunit 2", "gene_name": "KANSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N6-1", "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "KANSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y2-1", "protein_name": "MSL complex subunit 3", "gene_name": "MSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7Z6-1", "protein_name": "Histone acetyltransferase KAT8", "gene_name": "KAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 2-F", "gene_name": "H2BC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15294-1", "protein_name": "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit", "gene_name": "OGT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 1-A", "gene_name": "H2AC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15313887", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 108 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation.", "journal": "Molecular cell", "date": "2006", "authors": "Doyon Y, Cayrou C, Ullah M, Landry AJ, Cote V, Selleck W, Lane WS, Tan S, Yang XJ, Cote J", "reference": { "type": "PubMed", "id": "16387653", "url": "https://pubmed.ncbi.nlm.nih.gov/16387653" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULM3-1", "protein_name": "YEATS domain-containing protein 2", "gene_name": "YEATS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15014-1", "protein_name": "Mortality factor 4-like protein 2", "gene_name": "MORF4L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15265-1", "protein_name": "Ataxin-7", "gene_name": "ATXN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EZ8-1", "protein_name": "Microspherule protein 1", "gene_name": "MCRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYH5-1", "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "ZZZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51610-1", "protein_name": "Host cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR8-1", "protein_name": "Inhibitor of growth protein 3", "gene_name": "ING3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV56-1", "protein_name": "MRG/MORF4L-binding protein", "gene_name": "MRGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8E8-1", "protein_name": "Cysteine-rich protein 2-binding protein", "gene_name": "KAT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15906-1", "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "VPS72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS73-1", "protein_name": "MAP3K12-binding inhibitory protein 1", "gene_name": "MBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y265-1", "protein_name": "RuvB-like 1", "gene_name": "RUVBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9L4-1", "protein_name": "KAT8 regulatory NSL complex subunit 2", "gene_name": "KANSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N6-1", "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "KANSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y2-1", "protein_name": "MSL complex subunit 3", "gene_name": "MSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7Z6-1", "protein_name": "Histone acetyltransferase KAT8", "gene_name": "KAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H160-1", "protein_name": "Inhibitor of growth protein 2", "gene_name": "ING2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P49736-1", "protein_name": "DNA replication licensing factor MCM2", "gene_name": "MCM2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 2-F", "gene_name": "H2BC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15294-1", "protein_name": "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit", "gene_name": "OGT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 1-A", "gene_name": "H2AC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16387653", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 110 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular basis of histone H3K4me3 recognition by ING4.", "journal": "The Journal of biological chemistry", "date": "2008", "authors": "Palacios A, Munoz IG, Pantoja-Uceda D, Marcaida MJ, Torres D, Martin-Garcia JM, Luque I, Montoya G, Blanco FJ", "reference": { "type": "PubMed", "id": "18381289", "url": "https://pubmed.ncbi.nlm.nih.gov/18381289" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULM3-1", "protein_name": "YEATS domain-containing protein 2", "gene_name": "YEATS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15014-1", "protein_name": "Mortality factor 4-like protein 2", "gene_name": "MORF4L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15265-1", "protein_name": "Ataxin-7", "gene_name": "ATXN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EZ8-1", "protein_name": "Microspherule protein 1", "gene_name": "MCRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYH5-1", "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "ZZZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51610-1", "protein_name": "Host cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR8-1", "protein_name": "Inhibitor of growth protein 3", "gene_name": "ING3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV56-1", "protein_name": "MRG/MORF4L-binding protein", "gene_name": "MRGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8E8-1", "protein_name": "Cysteine-rich protein 2-binding protein", "gene_name": "KAT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15906-1", "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "VPS72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS73-1", "protein_name": "MAP3K12-binding inhibitory protein 1", "gene_name": "MBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y265-1", "protein_name": "RuvB-like 1", "gene_name": "RUVBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9L4-1", "protein_name": "KAT8 regulatory NSL complex subunit 2", "gene_name": "KANSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N6-1", "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "KANSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y2-1", "protein_name": "MSL complex subunit 3", "gene_name": "MSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7Z6-1", "protein_name": "Histone acetyltransferase KAT8", "gene_name": "KAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 2-F", "gene_name": "H2BC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15294-1", "protein_name": "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit", "gene_name": "OGT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 1-A", "gene_name": "H2AC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18381289", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 108 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The crystal structure of the ING5 PHD finger in complex with an H3K4me3 histone peptide.", "journal": "Proteins", "date": "2008", "authors": "Champagne KS, Saksouk N, Pena PV, Johnson K, Ullah M, Yang XJ, Cote J, Kutateladze TG", "reference": { "type": "PubMed", "id": "18623064", "url": "https://pubmed.ncbi.nlm.nih.gov/18623064" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULM3-1", "protein_name": "YEATS domain-containing protein 2", "gene_name": "YEATS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15014-1", "protein_name": "Mortality factor 4-like protein 2", "gene_name": "MORF4L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15265-1", "protein_name": "Ataxin-7", "gene_name": "ATXN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EZ8-1", "protein_name": "Microspherule protein 1", "gene_name": "MCRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYH5-1", "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "ZZZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51610-1", "protein_name": "Host cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR8-1", "protein_name": "Inhibitor of growth protein 3", "gene_name": "ING3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV56-1", "protein_name": "MRG/MORF4L-binding protein", "gene_name": "MRGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8E8-1", "protein_name": "Cysteine-rich protein 2-binding protein", "gene_name": "KAT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15906-1", "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "VPS72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS73-1", "protein_name": "MAP3K12-binding inhibitory protein 1", "gene_name": "MBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y265-1", "protein_name": "RuvB-like 1", "gene_name": "RUVBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9L4-1", "protein_name": "KAT8 regulatory NSL complex subunit 2", "gene_name": "KANSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N6-1", "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "KANSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y2-1", "protein_name": "MSL complex subunit 3", "gene_name": "MSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7Z6-1", "protein_name": "Histone acetyltransferase KAT8", "gene_name": "KAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 2-F", "gene_name": "H2BC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15294-1", "protein_name": "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit", "gene_name": "OGT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": 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"KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 1-A", "gene_name": "H2AC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18623064", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 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cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 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"gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y265-1", "protein_name": "RuvB-like 1", "gene_name": "RUVBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9L4-1", "protein_name": "KAT8 regulatory NSL complex subunit 2", "gene_name": "KANSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N6-1", "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "KANSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y2-1", "protein_name": "MSL complex subunit 3", "gene_name": "MSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7Z6-1", "protein_name": "Histone acetyltransferase KAT8", "gene_name": "KAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 2-F", "gene_name": "H2BC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15294-1", "protein_name": "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit", "gene_name": "OGT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 1-A", "gene_name": "H2AC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19187765", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 108 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Subunit composition and substrate specificity of a MOF-containing histone acetyltransferase distinct from the male-specific lethal (MSL) complex.", "journal": "The Journal of biological chemistry", "date": "2010", "authors": "Cai Y, Jin J, Swanson SK, Cole MD, Choi SH, Florens L, Washburn MP, Conaway JW, Conaway RC", "reference": { "type": "PubMed", "id": "20018852", "url": "https://pubmed.ncbi.nlm.nih.gov/20018852" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULM3-1", "protein_name": "YEATS domain-containing protein 2", "gene_name": "YEATS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15014-1", "protein_name": "Mortality factor 4-like protein 2", "gene_name": "MORF4L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14686-1", "protein_name": "Nuclear receptor coactivator 6", "gene_name": "NCOA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULX6-1", "protein_name": "A-kinase anchor protein 8-like", "gene_name": "AKAP8L", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15265-1", "protein_name": "Ataxin-7", "gene_name": "ATXN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EZ8-1", "protein_name": "Microspherule protein 1", "gene_name": "MCRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYH5-1", "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "ZZZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51610-1", "protein_name": "Host cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15047-1", "protein_name": "Histone-lysine N-methyltransferase SETD1A", "gene_name": "SETD1A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEZ4-1", "protein_name": "Histone-lysine N-methyltransferase 2C", "gene_name": "KMT2C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UMN6-1", "protein_name": "Histone-lysine N-methyltransferase 2B", "gene_name": "KMT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15291-1", "protein_name": "Retinoblastoma-binding protein 5", "gene_name": "RBBP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZW49-6", "protein_name": "PAX-interacting protein 1", "gene_name": "PAXIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR8-1", "protein_name": "Inhibitor of growth protein 3", "gene_name": "ING3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV56-1", "protein_name": "MRG/MORF4L-binding protein", "gene_name": "MRGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8E8-1", "protein_name": "Cysteine-rich protein 2-binding protein", "gene_name": "KAT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15906-1", "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "VPS72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS73-1", "protein_name": "MAP3K12-binding inhibitory protein 1", "gene_name": "MBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPS6-1", "protein_name": "Histone-lysine N-methyltransferase SETD1B", "gene_name": "SETD1B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y265-1", "protein_name": "RuvB-like 1", "gene_name": "RUVBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9L4-1", "protein_name": "KAT8 regulatory NSL complex subunit 2", "gene_name": "KANSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N6-1", "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "KANSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y2-1", "protein_name": "MSL complex subunit 3", "gene_name": "MSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7Z6-1", "protein_name": "Histone acetyltransferase KAT8", "gene_name": "KAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15550-1", "protein_name": "Lysine-specific demethylase 6A", "gene_name": "KDM6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBL3-1", "protein_name": "Set1/Ash2 histone methyltransferase complex subunit ASH2", "gene_name": "ASH2L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C005-1", "protein_name": "Protein dpy-30 homolog", "gene_name": "DPY30", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14686-1", "protein_name": "Histone-lysine N-methyltransferase 2D", "gene_name": "KMT2D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q03164-1", "protein_name": "Histone-lysine N-methyltransferase 2A", "gene_name": "KMT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P0U4-1", "protein_name": "CXXC-type zinc finger protein 1", "gene_name": "CXXC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75475-1", "protein_name": "PC4 and SFRS1-interacting protein", "gene_name": "PSIP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96IK1-1", "protein_name": "Biorientation of chromosomes in cell division protein 1", "gene_name": "BOD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NFC6-1", "protein_name": "Biorientation of chromosomes in cell division protein 1-like 1", "gene_name": "BOD1L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 2-F", "gene_name": "H2BC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15294-1", "protein_name": "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit", "gene_name": "OGT", "tax_name": "Human" }, { "uniprot_canonical_ac": "A8MW92-1", "protein_name": "PHD finger protein 20-like protein 1", "gene_name": "PHF20L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6P5-1", "protein_name": "Threonine aspartase 1", "gene_name": "TASP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00255-2", "protein_name": "Menin", "gene_name": "MEN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTK6-1", "protein_name": "PAXIP1-associated glutamate-rich protein 1", "gene_name": "PAGR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 1-A", "gene_name": "H2AC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5Z7-1", "protein_name": "Host cell factor 2", "gene_name": "HCFC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UXN9-1", "protein_name": "WD repeat-containing protein 82", "gene_name": "WDR82", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20018852", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 131 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Nucleosomal DNA regulates the core-histone-binding subunit of the human Hat1 acetyltransferase.", "journal": "Current biology : CB", "date": "1998", "authors": "Verreault A, Kaufman PD, Kobayashi R, Stillman B", "reference": { "type": "PubMed", "id": "9427644", "url": "https://pubmed.ncbi.nlm.nih.gov/9427644" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULM3-1", "protein_name": "YEATS domain-containing protein 2", "gene_name": "YEATS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15014-1", "protein_name": "Mortality factor 4-like protein 2", "gene_name": "MORF4L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15265-1", "protein_name": "Ataxin-7", "gene_name": "ATXN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EZ8-1", "protein_name": "Microspherule protein 1", "gene_name": "MCRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYH5-1", "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "ZZZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51610-1", "protein_name": "Host cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13330-1", "protein_name": "Metastasis-associated protein MTA1", "gene_name": "MTA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q13547-1", "protein_name": "Histone deacetylase 1", "gene_name": "HDAC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86YP4-1", "protein_name": "Transcriptional repressor p66-alpha", "gene_name": "GATAD2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR8-1", "protein_name": "Inhibitor of growth protein 3", "gene_name": "ING3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV56-1", "protein_name": "MRG/MORF4L-binding protein", "gene_name": "MRGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8E8-1", "protein_name": "Cysteine-rich protein 2-binding protein", "gene_name": "KAT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15906-1", "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "VPS72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS73-1", "protein_name": "MAP3K12-binding inhibitory protein 1", "gene_name": "MBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6NUJ5-1", "protein_name": "PWWP domain-containing protein 2B", "gene_name": "PWWP2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "P84243-1", "protein_name": "Histone H3.3", "gene_name": "H3-3A; H3-3B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75956-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 2", "gene_name": "CDK2AP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95983-1", "protein_name": "Methyl-CpG-binding domain protein 3", "gene_name": "MBD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14839-1", "protein_name": "ATP-dependent chromatin 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"Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09028-1", "protein_name": "Histone-binding protein RBBP4", "gene_name": "RBBP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NHZ7-1", "protein_name": "Methyl-CpG-binding domain protein 3-like 2", "gene_name": "MBD3L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63279-1", "protein_name": "SUMO-conjugating enzyme UBC9", "gene_name": "UBE2I", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P63165-1", "protein_name": "Small ubiquitin-related modifier 1", "gene_name": "SUMO1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12873-1", "protein_name": "ATP-dependent chromatin remodeler CHD3", "gene_name": "CHD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92769-1", "protein_name": "Histone deacetylase 2", "gene_name": "HDAC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16104-1", "protein_name": "Histone H2AX", "gene_name": "H2AX", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94776-1", "protein_name": "Metastasis-associated protein MTA2", "gene_name": "MTA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTC8-1", "protein_name": "Metastasis-associated protein MTA3", "gene_name": "MTA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 2-F", "gene_name": "H2BC18", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33778-1", "protein_name": "Histone H2B type 1-B", "gene_name": "H2BC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P58876-1", "protein_name": "Histone H2B type 1-D", "gene_name": "H2BC5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96A08-1", "protein_name": "Histone H2B type 1-A", "gene_name": "H2BC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23527-1", "protein_name": "Histone H2B type 1-O", "gene_name": "H2BC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15294-1", "protein_name": "UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit", "gene_name": "OGT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVI0-1", "protein_name": "PHD finger protein 20", "gene_name": "PHF20", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C5Y9-1", "protein_name": "Histone H2A-Bbd type 1", "gene_name": "H2AB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWY6-1", "protein_name": "Methyl-CpG-binding domain protein 3-like 1", "gene_name": "MBD3L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P23760-1", "protein_name": "Paired box protein Pax-3", "gene_name": "PAX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96N64-1", "protein_name": "PWWP domain-containing protein 2A", "gene_name": "PWWP2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BTM1-1", "protein_name": "Histone H2A.J", "gene_name": "H2AJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14519-1", "protein_name": "Cyclin-dependent kinase 2-associated protein 1", "gene_name": "CDK2AP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71UI9-1", "protein_name": "Histone H2A.V", "gene_name": "H2AZ2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P57053-1", "protein_name": "Histone H2B type F-S", "gene_name": "H2BC12L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 1-A", "gene_name": "H2AC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99877-1", "protein_name": "Histone H2B type 1-N", "gene_name": "H2BC15", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99878-1", "protein_name": "Histone H2A type 1-J", "gene_name": "H2AC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99880-1", "protein_name": "Histone H2B type 1-L", "gene_name": "H2BC13", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBB5-1", "protein_name": "Methyl-CpG-binding domain protein 2", "gene_name": "MBD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXI9-1", "protein_name": "Transcriptional repressor p66-beta", "gene_name": "GATAD2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9427644", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 135 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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"gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6FI13-1", "protein_name": "Histone H2A type 2-A", "gene_name": "H2AC18; H2AC19", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7L7L0-1", "protein_name": "Histone H2A type 3", "gene_name": "H2AC25", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUE6-1", "protein_name": "Histone H2A type 2-B", "gene_name": "H2AC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N257-1", "protein_name": "Histone H2B type 3-B", "gene_name": "H2BC26", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96QV6-1", "protein_name": "Histone H2A type 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The TAFs in the HAT.", "journal": "Cell", "date": "1998-07-10", "authors": "Struhl K, Moqtaderi Z", "reference": { "type": "PubMed", "id": "9674419", "url": "https://pubmed.ncbi.nlm.nih.gov/9674419" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9674419", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y6J9", "url": "https://www.uniprot.org/uniprotkb/Q9Y6J9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9674425", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Overlapping but distinct patterns of histone acetylation by the human coactivators p300 and PCAF within nucleosomal substrates.", "journal": "The Journal of biological chemistry", "date": "1999", "authors": "Schiltz RL, Mizzen CA, Vassilev A, Cook RG, Allis CD, Nakatani Y", "reference": { "type": "PubMed", "id": "9880483", "url": "https://pubmed.ncbi.nlm.nih.gov/9880483" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y6J9-1", "protein_name": "TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L", "gene_name": "TAF6L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULM3-1", "protein_name": "YEATS domain-containing protein 2", "gene_name": "YEATS2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15014-1", "protein_name": "Mortality factor 4-like protein 2", "gene_name": "MORF4L2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92793-1", "protein_name": "CREB-binding protein", "gene_name": "CREBBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15265-1", "protein_name": "Ataxin-7", "gene_name": "ATXN7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92993-1", "protein_name": "Histone acetyltransferase KAT5", "gene_name": "KAT5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EZ8-1", "protein_name": "Microspherule protein 1", "gene_name": "MCRS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IYH5-1", "protein_name": "ZZ-type zinc finger-containing protein 3", "gene_name": "ZZZ3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51610-1", "protein_name": "Host cell factor 1", "gene_name": "HCFC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15336-1", "protein_name": "Cyclic AMP-dependent transcription factor ATF-2", "gene_name": "ATF2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYB5-1", "protein_name": "Histone acetyltransferase KAT6B", "gene_name": "KAT6B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBU8-1", "protein_name": "Mortality factor 4-like protein 1", "gene_name": "MORF4L1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16576-1", "protein_name": "Histone-binding protein RBBP7", "gene_name": "RBBP7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01658-1", "protein_name": "Protein Dr1", "gene_name": "DR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F5-1", "protein_name": "Enhancer of polycomb homolog 1", "gene_name": "EPC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75529-1", "protein_name": "TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L", "gene_name": "TAF5L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NXR8-1", "protein_name": "Inhibitor of growth protein 3", "gene_name": "ING3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NV56-1", "protein_name": "MRG/MORF4L-binding protein", "gene_name": "MRGBP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEM7-1", "protein_name": "Transcription factor SPT20 homolog", "gene_name": "SUPT20H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H8E8-1", "protein_name": "Cysteine-rich protein 2-binding protein", "gene_name": "KAT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15906-1", "protein_name": "Vacuolar protein sorting-associated protein 72 homolog", "gene_name": "VPS72", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NS73-1", "protein_name": "MAP3K12-binding inhibitory protein 1", "gene_name": "MBIP", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16594-1", "protein_name": "Transcription initiation factor TFIID subunit 9", "gene_name": "TAF9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q68DK7-1", "protein_name": "Male-specific lethal 1 homolog", "gene_name": "MSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O94864-1", "protein_name": "STAGA complex 65 subunit gamma", "gene_name": "SUPT7L", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E3-1", "protein_name": "Histone deacetylase complex subunit SAP130", "gene_name": "SAP130", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPF5-1", "protein_name": "DNA methyltransferase 1-associated protein 1", "gene_name": "DMAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y265-1", "protein_name": "RuvB-like 1", "gene_name": "RUVBL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9L4-1", "protein_name": "KAT8 regulatory NSL complex subunit 2", "gene_name": "KANSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9P2N6-1", "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "KANSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N5Y2-1", "protein_name": "MSL complex subunit 3", "gene_name": "MSL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H7Z6-1", "protein_name": "Histone acetyltransferase KAT8", "gene_name": "KAT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92613-1", "protein_name": "Protein Jade-3", "gene_name": "JADE3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92830-1", "protein_name": "Histone acetyltransferase KAT2A", "gene_name": "KAT2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92794-1", "protein_name": "Histone acetyltransferase KAT6A", "gene_name": "KAT6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86TJ2-1", "protein_name": "Transcriptional adapter 2-beta", "gene_name": "TADA2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95619-1", "protein_name": "YEATS domain-containing protein 4", "gene_name": "YEATS4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9HAF1-1", "protein_name": "Chromatin modification-related protein MEAF6", "gene_name": "MEAF6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P61964-1", "protein_name": "WD repeat-containing protein 5", "gene_name": "WDR5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P0C0S8-1", "protein_name": "Histone H2A type 1", "gene_name": "H2AC11; H2AC13; H2AC15; H2AC16; H2AC17", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62805-1", "protein_name": "Histone H4", "gene_name": "H4C11; H4C12; H4C13; H4C14; H4C15; H4C16; H4C1; H4C2; H4C3; H4C4; H4C5; H4C6; H4C8; H4C9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P68431-1", "protein_name": "Histone H3.1", "gene_name": "H3C10; H3C11; H3C12; H3C1; H3C2; H3C3; H3C4; H3C6; H3C7; H3C8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q09472-1", "protein_name": "Histone acetyltransferase p300", "gene_name": "EP300", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WYH8-1", "protein_name": "Inhibitor of growth protein 5", "gene_name": "ING5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16778-1", "protein_name": "Histone H2B type 2-E", "gene_name": "H2BC21", "tax_name": "Human" }, { "uniprot_canonical_ac": "P62807-1", "protein_name": "Histone H2B type 1-C/E/F/G/I", "gene_name": "H2BC10; H2BC4; H2BC6; H2BC7; H2BC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95251-1", "protein_name": "Histone acetyltransferase KAT7", "gene_name": "KAT7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPA8-1", "protein_name": "Transcription and mRNA export factor ENY2", "gene_name": "ENY2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14CW9-1", "protein_name": "Ataxin-7-like protein 3", "gene_name": "ATXN7L3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96ES7-1", "protein_name": "SAGA-associated factor 29", "gene_name": "SGF29", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14929-1", "protein_name": "Histone acetyltransferase type B catalytic subunit", "gene_name": "HAT1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B3-1", "protein_name": "KAT8 regulatory NSL complex subunit 1", "gene_name": "KANSL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55201-1", "protein_name": "Peregrin", "gene_name": "BRPF1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q71DI3-1", "protein_name": "Histone H3.2", "gene_name": "H3C13; H3C14; H3C15", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95696-1", "protein_name": "Bromodomain-containing protein 1", "gene_name": "BRD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y4A5-1", "protein_name": "Transformation/transcription domain-associated protein", "gene_name": "TRRAP", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15516-1", "protein_name": "Circadian locomoter output cycles protein kaput", "gene_name": "CLOCK", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H0E9-1", "protein_name": "Bromodomain-containing protein 8", "gene_name": "BRD8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95163-1", "protein_name": "Elongator complex protein 1", "gene_name": "ELP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q0PNE2-1", "protein_name": "Elongator complex protein 6", "gene_name": "ELP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H9T3-1", "protein_name": "Elongator complex protein 3", "gene_name": "ELP3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5QNW6-1", "protein_name": "Histone H2B type 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"uniprot_canonical_ac": "Q9UNL4-1", "protein_name": "Inhibitor of growth protein 4", "gene_name": "ING4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O60814-1", "protein_name": "Histone H2B type 1-K", "gene_name": "H2BC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93077-1", "protein_name": "Histone H2A type 1-C", "gene_name": "H2AC6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q93079-1", "protein_name": "Histone H2B type 1-H", "gene_name": "H2BC9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96KK5-1", "protein_name": "Histone H2A type 1-H", "gene_name": "H2AC12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99879-1", "protein_name": "Histone H2B type 1-M", "gene_name": "H2BC14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16514-1", "protein_name": "Transcription initiation factor TFIID subunit 12", "gene_name": "TAF12", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75486-1", "protein_name": "Transcription initiation protein SPT3 homolog", "gene_name": "SUPT3H", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96BN2-1", "protein_name": "Transcriptional adapter 1", "gene_name": "TADA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9ULD4-1", "protein_name": "Bromodomain and PHD finger-containing protein 3", "gene_name": "BRPF3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92831-1", "protein_name": "Histone acetyltransferase KAT2B", "gene_name": "KAT2B", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75528-1", "protein_name": "Transcriptional adapter 3", "gene_name": "TADA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TE02-5", "protein_name": "Elongator complex protein 5", "gene_name": "ELP5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12962-1", "protein_name": "Transcription initiation factor TFIID subunit 10", "gene_name": "TAF10", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75478-1", "protein_name": "Transcriptional adapter 2-alpha", "gene_name": "TADA2A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y230-1", "protein_name": "RuvB-like 2", "gene_name": "RUVBL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IE81-1", "protein_name": "Protein Jade-1", "gene_name": "JADE1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NQC1-1", "protein_name": "E3 ubiquitin-protein ligase Jade-2", "gene_name": "JADE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P04908-1", "protein_name": "Histone H2A type 1-B/E", "gene_name": "H2AC4; H2AC8", "tax_name": "Human" }, { "uniprot_canonical_ac": "P06899-1", "protein_name": "Histone H2B type 1-J", "gene_name": "H2BC11", "tax_name": "Human" }, { "uniprot_canonical_ac": "P20671-1", "protein_name": "Histone H2A type 1-D", "gene_name": "H2AC7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16777-1", "protein_name": "Histone H2A type 2-C", "gene_name": "H2AC20", "tax_name": 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"Human" }, { "uniprot_canonical_ac": "Q9HCI7-1", "protein_name": "E3 ubiquitin-protein ligase MSL2", "gene_name": "MSL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96L91-1", "protein_name": "E1A-binding protein p400", "gene_name": "EP400", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96EB1-1", "protein_name": "Elongator complex protein 4", "gene_name": "ELP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6IA86-1", "protein_name": "Elongator complex protein 2", "gene_name": "ELP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96019-1", "protein_name": "Actin-like protein 6A", "gene_name": "ACTL6A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPT9-1", "protein_name": "Ubiquitin carboxyl-terminal hydrolase 22", "gene_name": "USP22", "tax_name": "Human" }, { "uniprot_canonical_ac": "P60709-1", "protein_name": "Actin, cytoplasmic 1", "gene_name": "ACTB", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { 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testicular cDNAs for discovery of novel human genes in the human genome sequence.", "journal": "BMC genomics", "date": "2002", "authors": "Osada N, Hida M, Kusuda J, Tanuma R, Hirata M, Suto Y, Hirai M, Terao K, Sugano S, Hashimoto K", "reference": { "type": "PubMed", "id": "12498619", "url": "https://pubmed.ncbi.nlm.nih.gov/12498619" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TAQ9-1", "protein_name": "SUN domain-containing protein 3", "gene_name": "SUN3", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8TAQ9", "url": "https://www.uniprot.org/uniprotkb/Q8TAQ9" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.12498619", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ 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0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A two-stage genome-wide association study of sporadic amyotrophic lateral sclerosis.", "journal": "Human molecular genetics", "date": "2009", "authors": "Chio A, Schymick JC, Restagno G, Scholz SW, Lombardo F, Lai SL, Mora G, Fung HC, Britton A, Arepalli S, Gibbs JR, Nalls M, Berger S, Kwee LC, Oddone EZ, Ding J, Crews C, Rafferty I, Washecka N, Hernandez D, Ferrucci L, Bandinelli S, Guralnik J, Macciardi F, Torri F, Lupoli S, Chanock SJ, Thomas G, Hunter DJ, Gieger C, Wichmann HE, Calvo A, Mutani R, Battistini S, Giannini F, Caponnetto C, Mancardi GL, La Bella V, Valentino F, Monsurro MR, Tedeschi G, Marinou K, Sabatelli M, Conte A, Mandrioli J, Sola P, Salvi F, Bartolomei I, Siciliano G, Carlesi C, Orrell RW, Talbot K, Simmons Z, Connor J, Pioro EP, Dunkley T, Stephan DA, Kasperaviciute D, Fisher EM, Jabonka S, Sendtner M, Beck M, Bruijn L, Rothstein J, Schmidt S, Singleton A, Hardy J, Traynor BJ", "reference": { "type": "PubMed", "id": "19193627", "url": "https://pubmed.ncbi.nlm.nih.gov/19193627" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8TAQ9-1", "protein_name": "SUN domain-containing protein 3", "gene_name": "SUN3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96C11-1", "protein_name": "FGGY carbohydrate kinase domain-containing protein", "gene_name": "FGGY", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NEG2-1", "protein_name": 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"tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IWT6-1", "protein_name": "Volume-regulated anion channel subunit LRRC8A", "gene_name": "LRRC8A", "tax_name": "Human" }, { "uniprot_canonical_ac": "A4IFI1-1", "protein_name": "Coiled-coil domain-containing protein 157", "gene_name": "CCDC157", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P02663-1", "protein_name": "Alpha-S2-casein", "gene_name": "CSN1S2", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P06731-1", "protein_name": "Cell adhesion molecule CEACAM5", "gene_name": "CEACAM5", "tax_name": "Human" }, { "uniprot_canonical_ac": "A2VE31-1", "protein_name": "Sodium-coupled neutral amino acid symporter 2", "gene_name": "SLC38A2", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q6IMF3-1", "protein_name": "Keratin, type II cytoskeletal 1", "gene_name": "Krt1", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q4FZU2-1", "protein_name": "Keratin, type II cytoskeletal 6A", "gene_name": "Krt6a", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q6IG00-1", "protein_name": "Keratin, type II cytoskeletal 4", "gene_name": "Krt4", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q8VC34-1", "protein_name": "Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2", "gene_name": "Rpap2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P19001-1", "protein_name": "Keratin, type I cytoskeletal 19", "gene_name": "Krt19", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q86U44-1", "protein_name": "N(6)-adenosine-methyltransferase catalytic subunit METTL3", "gene_name": "METTL3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BFZ3-1", "protein_name": "Beta-actin-like protein 2", "gene_name": "Actbl2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P04843-1", "protein_name": "Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1", "gene_name": "RPN1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BXP2-1", "protein_name": "Solute carrier family 12 member 9", "gene_name": "SLC12A9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43291-1", "protein_name": "Kunitz-type protease inhibitor 2", "gene_name": "SPINT2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05023-1", "protein_name": "Sodium/potassium-transporting ATPase subunit alpha-1", "gene_name": "ATP1A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q00839-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein U", "gene_name": "HNRNPU", "tax_name": "Human" }, { "uniprot_canonical_ac": "P38646-1", "protein_name": "Stress-70 protein, mitochondrial", "gene_name": "HSPA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N1N4-1", "protein_name": "Keratin, type II cytoskeletal 78", "gene_name": "KRT78", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUJ2-1", "protein_name": "Heterogeneous nuclear ribonucleoprotein U-like protein 1", "gene_name": "HNRNPUL1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43570-1", "protein_name": "Carbonic anhydrase 12", "gene_name": "CA12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40199-1", "protein_name": "Cell adhesion molecule CEACAM6", "gene_name": "CEACAM6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P16070-1", "protein_name": "CD44 antigen", "gene_name": "CD44", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UPY5-1", "protein_name": "Cystine/glutamate transporter", "gene_name": "SLC7A11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O62787-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 3", "gene_name": "SLC2A3", "tax_name": "Pig" }, { "uniprot_canonical_ac": "P17844-1", "protein_name": "Probable ATP-dependent RNA helicase DDX5", "gene_name": "DDX5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96PD2-1", "protein_name": "Discoidin, CUB and LCCL domain-containing protein 2", "gene_name": "DCBLD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35579-1", "protein_name": "Myosin-9", "gene_name": "MYH9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11279-1", "protein_name": "Lysosome-associated membrane glycoprotein 1", "gene_name": "LAMP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P00761-1", "protein_name": "Trypsin", "gene_name": "", "tax_name": "Pig" }, { "uniprot_canonical_ac": "P13645-1", "protein_name": "Keratin, type I cytoskeletal 10", "gene_name": "KRT10", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19013-1", "protein_name": "Keratin, type II cytoskeletal 4", "gene_name": "KRT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02533-1", "protein_name": "Keratin, type I cytoskeletal 14", "gene_name": "KRT14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86Y46-1", "protein_name": "Keratin, type II cytoskeletal 73", "gene_name": "KRT73", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7RTS7-1", "protein_name": "Keratin, type II cytoskeletal 74", "gene_name": "KRT74", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSB4-1", "protein_name": "Keratin, type II cuticular Hb2", "gene_name": "KRT82", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P3R8-1", "protein_name": "Serine/threonine-protein kinase Nek5", "gene_name": "NEK5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6N5-1", "protein_name": "Sulfide:quinone oxidoreductase, mitochondrial", "gene_name": "SQOR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11166-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 1", "gene_name": "SLC2A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3TTY5-1", "protein_name": "Keratin, type II cytoskeletal 2 epidermal", "gene_name": "Krt2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6IFZ6-1", "protein_name": "Keratin, type II cytoskeletal 1b", "gene_name": "Krt77", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P26006-2", "protein_name": "Integrin alpha-3", "gene_name": "ITGA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01650-1", "protein_name": "Large neutral amino acids transporter small subunit 1", "gene_name": "SLC7A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P13473-1", "protein_name": "Lysosome-associated membrane glycoprotein 2", "gene_name": "LAMP2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P2Q9-1", "protein_name": "Pre-mRNA-processing-splicing factor 8", "gene_name": "PRPF8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q10758-1", "protein_name": "Keratin, type II cytoskeletal 8", "gene_name": "Krt8", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q6IFV3-1", "protein_name": "Keratin, type I cytoskeletal 15", "gene_name": "Krt15", "tax_name": "Rat" }, { "uniprot_canonical_ac": "F1M5M3-1", "protein_name": "Inactive serine/threonine-protein kinase TEX14", "gene_name": "Tex14", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q5I0E6-1", "protein_name": "RNA polymerase II subunit B1 CTD phosphatase Rpap2", "gene_name": "Rpap2", "tax_name": "Rat" }, { "uniprot_canonical_ac": "O88788-1", "protein_name": "Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase", "gene_name": "Alg10b", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q0P5M8-1", "protein_name": "Mitochondrial-processing peptidase subunit alpha", "gene_name": "PMPCA", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q0P5J4-1", "protein_name": "Keratin, type I cytoskeletal 25", "gene_name": "KRT25", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P06394-1", "protein_name": "Keratin, type I cytoskeletal 10", "gene_name": "KRT10", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q8SQH5-1", "protein_name": "ADP/ATP translocase 2", "gene_name": "SLC25A5", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "O75751-1", "protein_name": "Solute carrier family 22 member 3", "gene_name": "SLC22A3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08195-2", "protein_name": "Amino acid transporter heavy chain SLC3A2", "gene_name": "SLC3A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BVL2-1", "protein_name": "Nucleoporin p58/p45", "gene_name": "NUP58", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q01844-1", "protein_name": "RNA-binding protein EWS", "gene_name": "EWSR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P07355-1", "protein_name": "Annexin A2", "gene_name": "ANXA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48448-1", "protein_name": "Aldehyde dehydrogenase family 3 member B2", "gene_name": "ALDH3B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86SJ2-1", "protein_name": "Amphoterin-induced protein 2", "gene_name": "AMIGO2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H6X2-1", "protein_name": "Anthrax toxin receptor 1", "gene_name": "ANTXR1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02768-1", "protein_name": "Albumin", "gene_name": "ALB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y653-1", "protein_name": "Adhesion G protein-coupled receptor G1", "gene_name": "ADGRG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05556-1", "protein_name": "Integrin beta-1", "gene_name": "ITGB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28571-3", "protein_name": "Sodium- and chloride-dependent glycine transporter 1", "gene_name": "Slc6a9", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q12913-1", "protein_name": "Receptor-type tyrosine-protein phosphatase eta", "gene_name": "PTPRJ", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H1Z9-1", "protein_name": "Tetraspanin-10", "gene_name": "TSPAN10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q3SZ63-1", "protein_name": "Nucleolar protein 56", "gene_name": "NOP56", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q01449-1", "protein_name": "Myosin regulatory light chain 2, atrial isoform", "gene_name": "MYL7", "tax_name": "Human" }, { "uniprot_canonical_ac": "P12829-1", "protein_name": "Myosin light chain 4", "gene_name": "MYL4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z406-1", "protein_name": "Myosin-14", "gene_name": "MYH14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9C0G6-1", "protein_name": "Dynein axonemal heavy chain 6", "gene_name": "DNAH6", "tax_name": "Human" }, { "uniprot_canonical_ac": "A9QT41-1", "protein_name": "NF-kappa-B essential modulator", "gene_name": "IKBKG", "tax_name": "Pig" }, { "uniprot_canonical_ac": "P23229-1", "protein_name": "Integrin alpha-6", "gene_name": "ITGA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99567-1", "protein_name": "Nuclear pore complex protein Nup88", "gene_name": "NUP88", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00469-1", "protein_name": "Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2", "gene_name": "PLOD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28862-1", "protein_name": "Stromelysin-1", "gene_name": "Mmp3", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q69ZX6-1", "protein_name": "ATPase MORC2A", "gene_name": "Morc2a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q9P0T7-1", "protein_name": "Proton-transporting V-type ATPase complex assembly regulator TMEM9", "gene_name": "TMEM9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15050-1", "protein_name": "TPR and ankyrin repeat-containing protein 1", "gene_name": "TRANK1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5XQN5-1", "protein_name": "Keratin, type II cytoskeletal 5", "gene_name": "KRT5", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q865R3-1", "protein_name": "Basigin", "gene_name": "BSG", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q29S21-1", "protein_name": "Keratin, type II cytoskeletal 7", "gene_name": "KRT7", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q148H7-1", "protein_name": "Keratin, type II cytoskeletal 79", "gene_name": "KRT79", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "O35379-1", "protein_name": "Multidrug resistance-associated protein 1", "gene_name": "Abcc1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P50454-1", "protein_name": "Serpin H1", "gene_name": "SERPINH1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y666-1", "protein_name": "Solute carrier family 12 member 7", "gene_name": "SLC12A7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N697-1", "protein_name": "Solute carrier family 15 member 4", "gene_name": "SLC15A4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6F5E8-1", "protein_name": "Capping protein, Arp2/3 and myosin-I linker protein 2", "gene_name": "CARMIL2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TBZ0-1", "protein_name": "Coiled-coil domain-containing protein 110", "gene_name": "CCDC110", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05787-1", "protein_name": "Keratin, type II cytoskeletal 8", "gene_name": "KRT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z3B4-1", "protein_name": "Nucleoporin p54", "gene_name": "NUP54", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z794-1", "protein_name": "Keratin, type II cytoskeletal 1b", "gene_name": "KRT77", "tax_name": "Human" }, { "uniprot_canonical_ac": "P35527-1", "protein_name": "Keratin, type I cytoskeletal 9", "gene_name": "KRT9", "tax_name": "Human" }, { "uniprot_canonical_ac": "O76014-1", "protein_name": "Keratin, type I cuticular Ha7", "gene_name": "KRT37", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q7Z4F1-1", "protein_name": "Low-density lipoprotein receptor-related protein 10", "gene_name": "LRP10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92887-1", "protein_name": "ATP-binding cassette sub-family C member 2", "gene_name": "ABCC2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BUN1-1", "protein_name": "Protein MENT", "gene_name": "MENT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15438-1", "protein_name": "ATP-binding cassette sub-family C member 3", "gene_name": "ABCC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00159-1", "protein_name": "Unconventional myosin-Ic", "gene_name": "MYO1C", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NZM1-1", "protein_name": "Myoferlin", "gene_name": "MYOF", "tax_name": "Human" }, { "uniprot_canonical_ac": "A6BLY7-1", "protein_name": "Keratin, type I cytoskeletal 28", "gene_name": "Krt28", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P11679-1", "protein_name": "Keratin, type II cytoskeletal 8", "gene_name": "Krt8", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P50446-1", "protein_name": "Keratin, type II cytoskeletal 6A", "gene_name": "Krt6a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P5D8-1", "protein_name": "Structural maintenance of chromosomes flexible hinge domain-containing protein 1", "gene_name": "Smchd1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P05786-1", "protein_name": "Keratin, type II cytoskeletal 8", "gene_name": "KRT8", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q08D91-1", "protein_name": "Keratin, type II cytoskeletal 75", "gene_name": "KRT5; KRT6A; KRT75", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q29S22-1", "protein_name": "Probable ATP-dependent RNA helicase DDX47", "gene_name": "DDX47", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P49410-1", "protein_name": "Elongation factor Tu, mitochondrial", "gene_name": "TUFM", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "P58352-1", "protein_name": "Solute carrier family 2, facilitated glucose transporter member 3", "gene_name": "SLC2A3", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q2KJD0-1", "protein_name": "Tubulin beta-5 chain", "gene_name": "TUBB5", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q17QS0-1", "protein_name": "Secernin-3", "gene_name": "SCRN3", "tax_name": "Bovine" }, { "uniprot_canonical_ac": "Q9NVA1-1", "protein_name": "Ubiquinol-cytochrome c reductase complex assembly factor 1", "gene_name": "UQCC1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q495M9-1", "protein_name": "pre-mRNA splicing regulator USH1G", "gene_name": "USH1G", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19012-1", "protein_name": "Keratin, type I cytoskeletal 15", 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