[ { "title": "Molecular cloning of plant spermidine synthases.", "journal": "Plant Cell Physiol.", "date": "1998", "authors": "Hashimoto T, Tamaki K, Suzuki K, Yamada Y", "reference": { "type": "PubMed", "id": "9517003", "url": "https://pubmed.ncbi.nlm.nih.gov/9517003" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48661-1", "protein_name": "Spermidine synthase 2", "gene_name": "SPDSYN2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48661", "url": "https://www.uniprot.org/uniprotkb/O48661" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9517003", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Substrate specificity of Arabidopsis 3-ketoacyl-CoA synthases.", "journal": "Biochemical and biophysical research communications", "date": "2006-07-28", "authors": "Blacklock Brenda J, Jaworski Jan G", "reference": { "type": "PubMed", "id": "16765910", "url": "https://pubmed.ncbi.nlm.nih.gov/16765910" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48780-1", "protein_name": "3-ketoacyl-CoA synthase 11", "gene_name": "KCS11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65677-1", "protein_name": "3-ketoacyl-CoA synthase 17", "gene_name": "KCS17", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38860-1", "protein_name": "3-ketoacyl-CoA synthase 18", "gene_name": "FAE1", 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brassinosteroid hormones: an intersection between photomorphogenesis and plant steroid signal transduction.", "journal": "Plant physiology", "date": "2003-12", "authors": "Turk Edward M, Fujioka Shozo, Seto Hideharu, Shimada Yukihisa, Takatsuto Suguru, Yoshida Shigeo, Denzel Megan A, Torres Quetzal I, Neff Michael M", "reference": { "type": "PubMed", "id": "14605216", "url": "https://pubmed.ncbi.nlm.nih.gov/14605216" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48786-1", "protein_name": "Cytochrome P450 734A1", "gene_name": "CYP734A1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48786", "url": "https://www.uniprot.org/uniprotkb/O48786" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.14605216", "abstract": "", "glycosylation": [], "mutagenesis": [], 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Chem.", "date": "1998", "authors": "Larkin R M, Guilfoyle T J", "reference": { "type": "PubMed", "id": "9488692", "url": "https://pubmed.ncbi.nlm.nih.gov/9488692" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48890-1", "protein_name": "DNA-directed RNA polymerase II subunit 4", "gene_name": "NRPB4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P38421-1", "protein_name": "DNA-directed RNA polymerase II subunit 7", "gene_name": "NRPB7", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48890", "url": "https://www.uniprot.org/uniprotkb/O48890" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9488692", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"protein_name": "Cytochrome b5 isoform E", "gene_name": "CYTB5-E", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LD45-1", "protein_name": "Bax inhibitor 1", "gene_name": "BI-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUC5-1", "protein_name": "Dihydroceramide fatty acyl 2-hydroxylase FAH2", "gene_name": "FAH2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48916", "url": "https://www.uniprot.org/uniprotkb/O48916" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19054355", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 9 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", 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{ "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Plant sphingolipid fatty acid 2-hydroxylases have unique characters unlike their animal and fungus counterparts.", "journal": "Plant Signal. Behav.", "date": "2012", "authors": "Nagano Minoru, Uchimiya Hirofumi, Kawai-Yamada Maki", "reference": { "type": "PubMed", "id": "22918503", "url": "https://pubmed.ncbi.nlm.nih.gov/22918503" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O48916-1", "protein_name": "Dihydroceramide fatty acyl 2-hydroxylase FAH1", "gene_name": "FAH1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SUC5-1", "protein_name": "Dihydroceramide fatty acyl 2-hydroxylase FAH2", "gene_name": "FAH2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O48916", "url": "https://www.uniprot.org/uniprotkb/O48916" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22918503", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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Gen. Genet.", "date": "1998", "authors": "Gau A E, Thole H H, Sokolenko A, Altschmied L, Hermann R G, Pistorius E K", "reference": { "type": "PubMed", "id": "9829828", "url": "https://pubmed.ncbi.nlm.nih.gov/9829828" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O49347-1", "protein_name": "Photosystem II reaction center proteins PsbY, chloroplastic", "gene_name": "PSBY", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O49347", "url": "https://www.uniprot.org/uniprotkb/O49347" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9829828", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Biol.", "date": "2005", "authors": "Jasinski Sophie, Piazza Paolo, Craft Judith, Hay Angela, Woolley Lindsey, Rieu Ivo, Phillips Andrew, Hedden Peter, Tsiantis Miltos", "reference": { "type": "PubMed", "id": "16139211", "url": "https://pubmed.ncbi.nlm.nih.gov/16139211" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O64692-1", "protein_name": "Gibberellin 2-beta-dioxygenase 3", "gene_name": "GA2OX3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEA2-1", "protein_name": "Gibberellin 2-beta-dioxygenase 1", "gene_name": "GA2OX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C7Z1-1", "protein_name": "Gibberellin 2-beta-dioxygenase 4", "gene_name": "GA2OX4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9XFR9-1", "protein_name": "Gibberellin 2-beta-dioxygenase 2", "gene_name": "GA2OX2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": 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"gene_name": "CYP710A4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O64697", "url": "https://www.uniprot.org/uniprotkb/O64697" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.20444228", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis ZED1-related kinases mediate the temperature-sensitive intersection of immune response and growth homeostasis.", "journal": "The New phytologist", "date": "2017-07", "authors": "Wang Zhicai, Cui Dayong, Liu Jing, Zhao Jingbo, Liu Cheng, Xin Wei, Li Yuan, Liu Na, Ren Dongtao, Tang Dingzhong, Hu Yuxin", "reference": { "type": "PubMed", "id": "28499073", "url": "https://pubmed.ncbi.nlm.nih.gov/28499073" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O64798-1", "protein_name": "Inactive serine/threonine-protein kinase ZRK12", "gene_name": "ZRK12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVZ0-1", "protein_name": "Non-functional pseudokinase ZRK6", "gene_name": "ZRK6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LGB6-1", "protein_name": "Non-functional pseudokinase ZED1", "gene_name": "ZED1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23530-2", "protein_name": "Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1", "gene_name": "SNC1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q38834-1", "protein_name": "Disease resistance RPP13-like protein 4", "gene_name": "RPP13L4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SVY5-1", "protein_name": "Serine/threonine-protein kinase ZRK1", "gene_name": "ZRK1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O64798", "url": "https://www.uniprot.org/uniprotkb/O64798" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 173, "end_pos": 173, "sequence_org": "N", "sequence_mut": "S", "comment": "In zed1-D; normal growth of plants grown below 22 degrees Celsius, but high temperature (above 22 degrees Celsius)-dependent RPP13L4/ZAR1-influenced autoimmunity and growth retardation. Plants cultivated above 23 degrees Celsius are dwarf with crinkled lamina, shortened petiole, reduced pedicel length and silique numbers, increased branches, severely shortened inflorescence stem and clustered siliques. These phenotypes are associated with inhibited cell elongation and/or expansion and disturbed differentiation of trichomes and stomata, disorganized interfascicular fibers and fewer pith tissues in inflorescence stems as well as increased lignin deposition in the vasculatures. Elevated reactive oxygen species (ROS) content and extensive cell death as well as reduced expression of pathogenesis related genes (e.g. PR1 and PR2) but accumulation of SNC1 when grown at 25 degrees Celsius. The high temperature-induced autoimmune phenotype is blocked in the double mutant zed1-D zar1-3. Stronger binding activity with RPP13L4/ZAR1. Confined to the cytosol. Fully rescued by the over-expression of RKS1/ZRK1 and ZRK12, and partially by the over-expression of ZRK4, ZRK10, ZRK13 and ZRK14. The double mutants zed1-D snc1-11 and zed1-D nahG have restored normal growth phenotypes and rescued autoimmunity defects. These pleiotropic phenotypes are suppressed in plants lacking SZE1 and SZE2.", "evidence": [ { "database": "UniProtKB", "id": "Q8LGB6", "url": "https://www.uniprot.org/uniprotkb/Q8LGB6" }, { "database": "PubMed", "id": "28499073", "url": "https://pubmed.ncbi.nlm.nih.gov/28499073" }, { "database": "PubMed", "id": "30947022", "url": "https://pubmed.ncbi.nlm.nih.gov/30947022" } ], "uniprot_canonical_ac": "Q8LGB6-1" } ], "record_id": "pubmed.28499073", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The ARABIDOPSIS accession Pna-10 is a naturally occurring sng1 deletion mutant.", "journal": "Molecular plant", "date": "2010-01", "authors": "Li Xu, Bergelson Joy, Chapple Clint", "reference": { "type": "PubMed", "id": "19969522", "url": "https://pubmed.ncbi.nlm.nih.gov/19969522" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O64810-1", "protein_name": "Serine carboxypeptidase-like 10", "gene_name": "SCPL10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8RUW5-1", "protein_name": "Serine carboxypeptidase-like 8", "gene_name": "SCPL8; SNG1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O64810", "url": "https://www.uniprot.org/uniprotkb/O64810" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19969522", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "An Arabidopsis thaliana root-specific kinase homolog is induced by dehydration, ABA, and NaCl.", "journal": "The Plant journal : for cell and molecular biology", "date": "1995-07", "authors": "Hwang I, Goodman H M", "reference": { "type": "PubMed", "id": "7655506", "url": "https://pubmed.ncbi.nlm.nih.gov/7655506" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O64842-1", "protein_name": "Probable serine/threonine-protein kinase PBL12", "gene_name": "PBL12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O64842", "url": "https://www.uniprot.org/uniprotkb/O64842" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.7655506", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"protein_name": "Non-specific lipid transfer protein GPI-anchored 14", "gene_name": "LTPG14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q93WF6-1", "protein_name": "Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial", "gene_name": "SAG21", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S745-1", "protein_name": "Lipase-like PAD4", "gene_name": "PAD4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O64865", "url": "https://www.uniprot.org/uniprotkb/O64865" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.16299172", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ 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], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O64896", "url": "https://www.uniprot.org/uniprotkb/O64896" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11520870", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { 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"count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Trehalose-6-phosphate phosphatases from Arabidopsis thaliana: identification by functional complementation of the yeast tps2 mutant.", "journal": "The Plant journal : for cell and molecular biology", "date": "1998-03", "authors": "Vogel G, Aeschbacher R A, M\u00fcller J, Boller T, Wiemken A", "reference": { "type": "PubMed", "id": "9681009", "url": "https://pubmed.ncbi.nlm.nih.gov/9681009" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O64896-1", "protein_name": "Trehalose-phosphate phosphatase A", "gene_name": "TPPA", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9S4-1", "protein_name": "Trehalose-phosphate phosphatase B", "gene_name": "TPPB", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O64896", "url": 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with ABA, drought, and stress response regulators in processing-bodies and stress granules.", "journal": "PLoS ONE", "date": "2016", "authors": "Bogamuwa Srimathi, Jang Jyan-Chyun", "reference": { "type": "PubMed", "id": "26978070", "url": "https://pubmed.ncbi.nlm.nih.gov/26978070" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O65036-1", "protein_name": "Zinc finger CCCH domain-containing protein 54", "gene_name": "TZF6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZWA1-1", "protein_name": "Zinc finger CCCH domain-containing protein 2", "gene_name": "TZF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P43297-1", "protein_name": "Cysteine proteinase RD21A", "gene_name": "RD21A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FKW2-1", "protein_name": "Zinc finger CCCH domain-containing protein 61", "gene_name": "TZF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LGS1-1", "protein_name": 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Ming-Hau, Hwang San-Gwang, Lin Pei-Chi", "reference": { "type": "PubMed", "id": "19513806", "url": "https://pubmed.ncbi.nlm.nih.gov/19513806" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O65378-1", "protein_name": "1-aminocyclopropane-1-carboxylate oxidase 3", "gene_name": "F12F1.12", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O65378", "url": "https://www.uniprot.org/uniprotkb/O65378" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.19513806", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The R2R3 MYB transcription factor DUO1 activates a male germline-specific regulon essential for sperm cell differentiation in Arabidopsis.", "journal": "Plant Cell", "date": "2011", "authors": "Borg Michael, Brownfield Lynette, Khatab Hoda, Sidorova Anna, Lingaya Melanie, Twell David", "reference": { "type": "PubMed", "id": "21285328", "url": "https://pubmed.ncbi.nlm.nih.gov/21285328" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O65499-1", "protein_name": "Zinc finger protein ZAT3", "gene_name": "ZAT3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FK96-1", "protein_name": "Protein DMP9", "gene_name": "DMP9", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SIJ0-1", "protein_name": "Zinc finger protein ZAT2", "gene_name": "ZAT2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A0A178VEK7-1", "protein_name": "Transcription factor DUO1", "gene_name": "DUO1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O65499", "url": "https://www.uniprot.org/uniprotkb/O65499" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21285328", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Inhibition of saturated very-long-chain fatty acid biosynthesis by mefluidide and perfluidone, selective inhibitors of 3-ketoacyl-CoA synthases.", "journal": "Phytochemistry", "date": "2012", "authors": "Tresch Stefan, Heilmann Monika, Christiansen Nicole, Looser Ralf, Grossmann Klaus", 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"uniprot_canonical_ac": "Q9MAM3-1", "protein_name": "3-ketoacyl-CoA synthase 1", "gene_name": "KCS1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O65677", "url": "https://www.uniprot.org/uniprotkb/O65677" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.22284369", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 7 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Arabidopsis Domain of Unknown Function 1218 (DUF1218) Containing Proteins, MODIFYING WALL LIGNIN-1 and 2 (At1g31720/MWL-1 and At4g19370/MWL-2) Function Redundantly to Alter Secondary Cell Wall Lignin Content.", "journal": "PloS one", "date": "2016", "authors": "Mewalal Ritesh, Mizrachi Eshchar, Coetzee Berdine, Mansfield Shawn D, Myburg Alexander A", "reference": { "type": "PubMed", "id": "26930070", "url": "https://pubmed.ncbi.nlm.nih.gov/26930070" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O65708-1", "protein_name": "Protein MODIFYING WALL LIGNIN-2", "gene_name": "MWL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWJ7-1", "protein_name": "Cysteine-rich receptor-like protein kinase 19", "gene_name": "CRK19", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "A2RVU1-1", "protein_name": "Protein MODIFYING WALL LIGNIN-1", "gene_name": "MWL1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O65708", "url": "https://www.uniprot.org/uniprotkb/O65708" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.26930070", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Cytochrome P450 superfamily in Arabidopsis thaliana: isolation of cDNAs, differential expression, and RFLP mapping of multiple cytochromes P450.", "journal": "Plant Mol. Biol.", "date": "1998", "authors": "Mizutani M, Ward E, Ohta D", "reference": { "type": "PubMed", "id": "9620263", "url": "https://pubmed.ncbi.nlm.nih.gov/9620263" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O65790-1", "protein_name": "Cytochrome P450 81F1", "gene_name": "CYP81F1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O64636-1", "protein_name": "Cytochrome P450 76C1", "gene_name": "CYP76C1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65787-1", "protein_name": "Cytochrome P450 71B6", "gene_name": "CYP71B6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65788-1", "protein_name": "Cytochrome P450 71B2", "gene_name": "CYP71B2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FG65-1", "protein_name": "Cytochrome P450 81D1", "gene_name": "CYP81D1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65786-1", "protein_name": "Cytochrome P450 71B4", "gene_name": "CYP71B4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65784-1", "protein_name": "Cytochrome P450 71B5", "gene_name": "CYP71B5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65785-1", "protein_name": "Cytochrome P450 71B3", "gene_name": "CYP71B3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O65782-1", "protein_name": "Cytochrome P450 83B1", "gene_name": "CYP83B1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P48421-1", "protein_name": "Cytochrome P450 83A1", "gene_name": "CYP83A1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O65790", "url": "https://www.uniprot.org/uniprotkb/O65790" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9620263", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis ethylene-responsive element binding factors act as transcriptional activators or repressors of GCC box-mediated gene expression.", "journal": "The Plant cell", "date": "2000-03", "authors": "Fujimoto S Y, Ohta M, Usui A, Shinshi H, Ohme-Takagi M", "reference": { "type": "PubMed", "id": "10715325", "url": "https://pubmed.ncbi.nlm.nih.gov/10715325" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80338-1", "protein_name": "Ethylene-responsive transcription factor 2", "gene_name": "ERF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80341-1", "protein_name": "Ethylene-responsive transcription factor 5", "gene_name": "ERF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80337-1", "protein_name": "Ethylene-responsive transcription factor 1A", "gene_name": "ERF1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80339-1", "protein_name": "Ethylene-responsive transcription factor 3", "gene_name": "ERF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80340-1", "protein_name": "Ethylene-responsive transcription factor 4", "gene_name": "ERF4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80338", "url": "https://www.uniprot.org/uniprotkb/O80338" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10715325", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A role for the GCC-box in jasmonate-mediated activation of the PDF1.2 gene of Arabidopsis.", "journal": "Plant physiology", "date": "2003-06", "authors": "Brown Rebecca L, Kazan Kemal, McGrath Ken C, Maclean Don J, Manners John M", "reference": { "type": "PubMed", "id": "12805630", "url": "https://pubmed.ncbi.nlm.nih.gov/12805630" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80338-1", "protein_name": "Ethylene-responsive transcription factor 2", "gene_name": "ERF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LDC8-1", "protein_name": "Ethylene-responsive transcription factor 1B", "gene_name": "ERF1B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80339-1", "protein_name": "Ethylene-responsive transcription factor 3", "gene_name": "ERF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80340-1", "protein_name": "Ethylene-responsive transcription factor 4", "gene_name": "ERF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P47927-1", "protein_name": "Floral homeotic protein APETALA 2", "gene_name": "AP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80338", "url": "https://www.uniprot.org/uniprotkb/O80338" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12805630", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 5 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant.", "journal": "The Journal of biological chemistry", "date": "1998-10-09", "authors": "Hao D, Ohme-Takagi M, Sarai A", "reference": { "type": "PubMed", "id": "9756931", "url": "https://pubmed.ncbi.nlm.nih.gov/9756931" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80338-1", "protein_name": "Ethylene-responsive transcription factor 2", "gene_name": "ERF2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80341-1", "protein_name": "Ethylene-responsive transcription factor 5", "gene_name": "ERF5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VZ91-1", "protein_name": "Ethylene-responsive transcription factor 6", "gene_name": "ERF6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80337-1", "protein_name": "Ethylene-responsive transcription factor 1A", "gene_name": "ERF1A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80339-1", "protein_name": "Ethylene-responsive transcription factor 3", "gene_name": "ERF3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80340-1", "protein_name": "Ethylene-responsive transcription factor 4", "gene_name": "ERF4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80338", "url": "https://www.uniprot.org/uniprotkb/O80338" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9756931", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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"UniProtKB", "id": "O80386", "url": "https://www.uniprot.org/uniprotkb/O80386" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9668129", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, 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distinct type of glycerol-3-phosphate acyltransferase with sn-2 preference and phosphatase activity producing 2-monoacylglycerol.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "2010-06-29", "authors": "Yang Weili, Pollard Mike, Li-Beisson Yonghua, Beisson Fred, Feig Michael, Ohlrogge John", "reference": { "type": "PubMed", "id": "20551224", "url": "https://pubmed.ncbi.nlm.nih.gov/20551224" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80437-1", "protein_name": "Glycerol-3-phosphate 2-O-acyltransferase 6", "gene_name": "GPAT6", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMM0-1", "protein_name": "Glycerol-3-phosphate 2-O-acyltransferase 4", "gene_name": "GPAT4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80437", "url": "https://www.uniprot.org/uniprotkb/O80437" } ], 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Proteomic identification of all plastid-specific ribosomal proteins in higher plant chloroplast 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J. Biochem.", "date": "2003", "authors": "Yamaguchi Kenichi, Subramanian Alap R", "reference": { "type": "PubMed", "id": "12605670", "url": "https://pubmed.ncbi.nlm.nih.gov/12605670" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80439-1", "protein_name": "Small ribosomal subunit protein bTHXc", "gene_name": "RPS31", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8VYM4-1", "protein_name": "Small ribosomal subunit protein cS22", "gene_name": "PSRP2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80439", "url": "https://www.uniprot.org/uniprotkb/O80439" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.12605670", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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characterization, and functional expression of cDNAs encoding NADH-dependent methylenetetrahydrofolate reductase from higher plants.", "journal": "The Journal of biological chemistry", "date": "1999-12-17", "authors": "Roje S, Wang H, McNeil S D, Raymond R K, Appling D R, Shachar-Hill Y, Bohnert H J, Hanson A D", "reference": { "type": "PubMed", "id": "10593891", "url": "https://pubmed.ncbi.nlm.nih.gov/10593891" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80585-1", "protein_name": "Methylenetetrahydrofolate reductase (NADH) 2", "gene_name": "MTHFR2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SE60-1", "protein_name": "Methylenetetrahydrofolate reductase (NADH) 1", "gene_name": "MTHFR1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80585", "url": "https://www.uniprot.org/uniprotkb/O80585" } ], "common_name": "Mouse-ear cress", 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of wound-responsive RNA-binding proteins and their splice variants in Arabidopsis.", "journal": "Plant Mol. Biol.", "date": "2008", "authors": "Bove J\u00e9r\u00f4me, Kim Cha Young, Gibson Caroline A, Assmann Sarah M", "reference": { "type": "PubMed", "id": "18278441", "url": "https://pubmed.ncbi.nlm.nih.gov/18278441" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80678-1", "protein_name": "UBP1-associated protein 2B", "gene_name": "UBA2B", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKA4-1", "protein_name": "UBP1-associated protein 2C", "gene_name": "UBA2C", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LES2-1", "protein_name": "UBP1-associated protein 2A", "gene_name": "UBA2A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80678", "url": "https://www.uniprot.org/uniprotkb/O80678" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": 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"Type II NAD(P)H dehydrogenases are targeted to mitochondria and chloroplasts or peroxisomes in Arabidopsis thaliana.", "journal": "FEBS Lett.", "date": "2008", "authors": "Carrie Chris, Murcha Monika W, Kuehn Kristina, Duncan Owen, Barthet Michelle, Smith Penelope M, Eubel Holger, Meyer Etienne, Day David A, Millar A Harvey, Whelan James", "reference": { "type": "PubMed", "id": "18703057", "url": "https://pubmed.ncbi.nlm.nih.gov/18703057" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80874-1", "protein_name": "Internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial", "gene_name": "NDA2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94BV7-1", "protein_name": "External alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial", "gene_name": "NDB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8GWA1-1", "protein_name": "Internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial", 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"count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Coordinated plant defense responses in Arabidopsis revealed by microarray analysis.", "journal": "Proc. Natl. Acad. Sci. U.S.A.", "date": "2000", "authors": "Schenk P M, Kazan K, Wilson I, Anderson J P, Richmond T, Somerville S C, Manners J M", "reference": { "type": "PubMed", "id": "11027363", "url": "https://pubmed.ncbi.nlm.nih.gov/11027363" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80912-1", "protein_name": "Peroxidase 23", "gene_name": "PER23", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96509-1", "protein_name": "Peroxidase 55", "gene_name": "MUA22.13; PER55", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96522-1", "protein_name": "Peroxidase 45", "gene_name": "PER45", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96520-1", "protein_name": "Peroxidase 12", "gene_name": "PER12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39191-1", "protein_name": "Wall-associated receptor kinase 1", "gene_name": "WAK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q43729-1", "protein_name": "Peroxidase 57", "gene_name": "PER57", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q43731-1", "protein_name": "Peroxidase 50", "gene_name": "PER50", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q43387-1", "protein_name": "Peroxidase 71", "gene_name": "PER71", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O80912", "url": "https://www.uniprot.org/uniprotkb/O80912" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11027363", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 8 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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}, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functional characterization of four APETALA2-family genes (RAP2.6, RAP2.6L, DREB19 and DREB26) in Arabidopsis.", "journal": "Plant molecular biology", "date": "2011-01", "authors": "Krishnaswamy Sowmya, Verma Shiv, Rahman Muhammad H, Kav Nat N V", "reference": { "type": "PubMed", "id": "21069430", "url": "https://pubmed.ncbi.nlm.nih.gov/21069430" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80917-1", "protein_name": "Dehydration-responsive element-binding protein 2E", "gene_name": "DREB2E", "tax_name": 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"table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis cDNA clones isolated by transcomplementation of the fission yeast cAMP phosphodiesterase mutant.", "journal": "DNA Res.", "date": "2001", "authors": "Oshitani-Okamoto S, Kuromori T, Goto M, Yamamoto M", "reference": { "type": "PubMed", "id": "11572485", "url": "https://pubmed.ncbi.nlm.nih.gov/11572485" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O80925-1", 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"The Plant cell", "date": "2011-05", "authors": "Bessire Michael, Borel Sandra, Fabre Guillaume, Carra\u00e7a Luis, Efremova Nadia, Yephremov Alexander, Cao Yan, Jetter Reinhard, Jacquat Anne-Claude, M\u00e9traux Jean-Pierre, Nawrath Christiane", "reference": { "type": "PubMed", "id": "21628525", "url": "https://pubmed.ncbi.nlm.nih.gov/21628525" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81016-1", "protein_name": "ABC transporter G family member 32", "gene_name": "ABCG32", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81016", "url": "https://www.uniprot.org/uniprotkb/O81016" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.21628525", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"O81098-1", "protein_name": "DNA-directed RNA polymerases II and IV subunit 5A", "gene_name": "NRPB5A", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M1J2-1", "protein_name": "DNA-directed RNA polymerase V subunit 5A", "gene_name": "NRPE5A", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81098", "url": "https://www.uniprot.org/uniprotkb/O81098" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10231567", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", 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"count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Enzymatic and metabolic engineering for efficient production of syringin, sinapyl alcohol 4-O-glucoside, in Arabidopsis thaliana.", "journal": "Phytochemistry", "date": "2014-06", "authors": "Chu Yang, Kwon Tackmin, Nam Jaesung", "reference": { "type": "PubMed", "id": "24667164", "url": "https://pubmed.ncbi.nlm.nih.gov/24667164" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81498-1", "protein_name": "UDP-glycosyltransferase 72E3", "gene_name": "UGT72E3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LVR1-1", "protein_name": "UDP-glycosyltransferase 72E2", "gene_name": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of katD, a kinesin-like protein gene specifically expressed in floral tissues of Arabidopsis thaliana.", "journal": "Gene", "date": "1999", "authors": "Tamura K, Nakatani K, Mitsui H, Ohashi Y, Takahashi H", "reference": { "type": "PubMed", "id": "10196470", "url": "https://pubmed.ncbi.nlm.nih.gov/10196470" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81635-1", "protein_name": "Kinesin-like protein KIN-14G", "gene_name": "KIN14G", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81635", "url": "https://www.uniprot.org/uniprotkb/O81635" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10196470", 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Biol.", "date": "2008", "authors": "Deveaux Yves, Toffano-Nioche Claire, Claisse Gaelle, Thareau Vincent, Morin Halima, Laufs Patrick, Moreau Herv\u00e9, Kreis Martin, Lecharny Alain", "reference": { "type": "PubMed", "id": "18950478", "url": "https://pubmed.ncbi.nlm.nih.gov/18950478" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O81788-1", "protein_name": "WUSCHEL-related homeobox 13", "gene_name": "WOX13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LM84-1", "protein_name": "WUSCHEL-related homeobox 14", "gene_name": "WOX14", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "O81788", "url": "https://www.uniprot.org/uniprotkb/O81788" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.18950478", "abstract": "", "glycosylation": [], "mutagenesis": 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