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Cloning of PLDgamma and regulation of plant PLDgamma, -beta, and -alpha by polyphosphoinositides and calcium.", "journal": "J. Biol. Chem.", "date": "1997", "authors": "Qin W, Pappan K, Wang X", "reference": { "type": "PubMed", "id": "9353280", "url": "https://pubmed.ncbi.nlm.nih.gov/9353280" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38882-1", "protein_name": "Phospholipase D alpha 1", "gene_name": "PLDALPHA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P93733-1", "protein_name": "Phospholipase D beta 1", "gene_name": "PLDBETA1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9T053-1", "protein_name": "Phospholipase D gamma 1", "gene_name": "PLDGAMMA1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38882", "url": "https://www.uniprot.org/uniprotkb/Q38882" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.9353280", "abstract": "", "glycosylation": [], 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[], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94AZ2-1", "protein_name": "Sugar transport protein 13", "gene_name": "STP13", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O22845-1", "protein_name": "Calmodulin-like protein 5", "gene_name": "CML5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCU7-1", "protein_name": "Transcription factor MYB30", "gene_name": "MYB30", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q96289-1", "protein_name": "Zinc finger protein ZAT10", "gene_name": "ZAT10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LFS8-1", "protein_name": "Structural maintenance of chromosomes protein 5", "gene_name": "SMC5", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39050-1", "protein_name": "Casein kinase 1-like protein 11", "gene_name": "CKI1; CKL11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944A6-1", "protein_name": "Sucrose nonfermenting 4-like protein", "gene_name": "SNF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FGJ3-1", "protein_name": "Nuclear transcription factor Y subunit B-2", "gene_name": "NFYB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9M9S6-1", "protein_name": "UDP-galactose/UDP-glucose transporter 3", "gene_name": "UTR3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SSW2-1", "protein_name": "Zinc finger protein AZF2", "gene_name": "AZF2", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.10929106", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 12 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": 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[] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Detection of in vivo protein interactions between Snf1-related kinase subunits with intron-tagged epitope-labelling in plants cells.", "journal": "Nucleic Acids Res.", "date": "2001", "authors": "Ferrando A, Koncz-K\u00e1lm\u00e1n Z, Farr\u00e0s R, Tiburcio A, Schell J, Koncz C", "reference": { "type": "PubMed", "id": "11522840", "url": "https://pubmed.ncbi.nlm.nih.gov/11522840" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCY5-1", "protein_name": "SNF1-related protein kinase regulatory subunit beta-2", "gene_name": "KINB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11522840", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Structure and expression of a gene from Arabidopsis thaliana encoding a protein related to SNF1 protein kinase.", "journal": "Gene", "date": "1992", "authors": "Le Guen L, Thomas M, Bianchi M, Halford N G, Kreis M", "reference": { "type": "PubMed", "id": "1339373", "url": "https://pubmed.ncbi.nlm.nih.gov/1339373" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.1339373", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "AKINbeta3, a plant specific SnRK1 protein, is lacking domains present in yeast and mammals non-catalytic beta-subunits.", "journal": "Plant Mol. Biol.", "date": "2004", "authors": "Gissot Lionel, Polge C\u00e9cile, Bouly Jean-Pierre, Lemaitre Thomas, Kreis Martin, Thomas Martine", "reference": { "type": "PubMed", "id": "15803412", "url": "https://pubmed.ncbi.nlm.nih.gov/15803412" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944A6-1", "protein_name": "Sucrose nonfermenting 4-like protein", "gene_name": "SNF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUU8-1", "protein_name": "SNF1-related protein kinase regulatory subunit beta-3", "gene_name": "KINB3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.15803412", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "AKINbetagamma contributes to SnRK1 heterotrimeric complexes and interacts with two proteins implicated in plant pathogen resistance through its KIS/GBD sequence.", "journal": "Plant Physiol.", "date": "2006", "authors": "Gissot Lionel, Polge C\u00e9cile, Jossier Mathieu, Girin Thomas, Bouly Jean-Pierre, Kreis Martin, Thomas Martine", "reference": { "type": "PubMed", "id": "17028154", "url": "https://pubmed.ncbi.nlm.nih.gov/17028154" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCY5-1", "protein_name": "SNF1-related protein kinase regulatory subunit beta-2", "gene_name": "KINB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O04203-1", "protein_name": "Nematode resistance protein-like HSPRO2", "gene_name": "HSPRO2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84VQ1-1", "protein_name": "SNF1-related protein kinase regulatory subunit beta-1", "gene_name": "AKINBETA1; KINB1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q944A6-1", "protein_name": "Sucrose nonfermenting 4-like protein", "gene_name": "SNF4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LY61-1", "protein_name": "Nematode resistance protein-like HSPRO1", "gene_name": "HSPRO1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9ZUU8-1", "protein_name": "SNF1-related protein kinase regulatory subunit beta-3", "gene_name": "KINB3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": 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the heart of energy control?", "journal": "Trends Plant Sci.", "date": "2007", "authors": "Polge C\u00e9cile, Thomas Martine", "reference": { "type": "PubMed", "id": "17166759", "url": "https://pubmed.ncbi.nlm.nih.gov/17166759" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LBB2-1", "protein_name": "SNF1-related protein kinase regulatory subunit gamma-1", "gene_name": "KING1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FLZ3-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN12", "gene_name": "KIN12", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCY5-1", "protein_name": "SNF1-related protein kinase regulatory subunit beta-2", "gene_name": "KINB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A putative myristoylated 2C-type protein phosphatase, PP2C74, interacts with SnRK1 in Arabidopsis.", "journal": "FEBS Lett.", "date": "2012", "authors": "Tsugama Daisuke, Liu Shenkui, Takano Tetsuo", "reference": { "type": "PubMed", "id": "22449965", "url": "https://pubmed.ncbi.nlm.nih.gov/22449965" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FG61-1", "protein_name": "Probable protein phosphatase 2C 74", "gene_name": "PP2C74", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis CIPK14 positively regulates glucose response.", "journal": "Biochem. Biophys. Res. Commun.", "date": "2014", "authors": "Yan Jingli, Niu Fangfang, Liu Wu-Zhen, Zhang Hanfeng, Wang Boya, Lan Wenzhi, Che Yufen, Yang Bo, Luan Sheng, Jiang Yuan-Qing", "reference": { "type": "PubMed", "id": "25058458", "url": "https://pubmed.ncbi.nlm.nih.gov/25058458" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LAS7-1", "protein_name": "Calcineurin B-like protein 2", "gene_name": "CBL2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZW4-1", "protein_name": "CBL-interacting serine/threonine-protein kinase 14", "gene_name": "CIPK14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q8LEM7-1", "protein_name": "Calcineurin B-like protein 3", "gene_name": "CBL3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LTB8-1", "protein_name": "Calcineurin B-like protein 9", "gene_name": "CBL9", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25058458", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Regulation of sucrose non-fermenting related kinase 1 genes in Arabidopsis thaliana.", "journal": "Front. 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Plant Biol.", "date": "2014", "authors": "Sheen Jen", "reference": { "type": "PubMed", "id": "25530701", "url": "https://pubmed.ncbi.nlm.nih.gov/25530701" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9FR53-1", "protein_name": "Serine/threonine-protein kinase TOR", "gene_name": "TOR", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25530701", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PETAL LOSS, a trihelix transcription factor that represses growth in Arabidopsis thaliana, binds the energy-sensing SnRK1 kinase AKIN10.", "journal": "J. Exp. Bot.", "date": "2015", "authors": "O'Brien Martin, Kaplan-Levy Ruth N, Quon Tezz, Sappl Pia G, Smyth David R", "reference": { "type": "PubMed", "id": "25697797", "url": "https://pubmed.ncbi.nlm.nih.gov/25697797" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LZS0-1", "protein_name": "Trihelix transcription factor PTL", "gene_name": "PTL", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.25697797", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "SnRK1 from Arabidopsis thaliana is an atypical AMPK.", "journal": "Plant J.", "date": "2015", "authors": "Emanuelle Shane, Hossain Mohammed Iqbal, Moller Isabel E, Pedersen Henriette L, van de Meene Allison M L, Doblin Monika S, Koay Ann, Oakhill Jonathan S, Scott John W, Willats William G T, Kemp Bruce E, Bacic Antony, Gooley Paul R, Stapleton David I", "reference": { "type": "PubMed", "id": "25736509", "url": "https://pubmed.ncbi.nlm.nih.gov/25736509" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SCY5-1", "protein_name": "SNF1-related protein kinase regulatory subunit beta-2", "gene_name": "KINB2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "P92958-1", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN11", "gene_name": "KIN11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q84VQ1-1", "protein_name": "SNF1-related protein kinase regulatory subunit beta-1", "gene_name": "AKINBETA1; 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Exp. Bot.", "date": "2017", "authors": "Chan Aaron, Carianopol Carina, Tsai Allen Yi-Lun, Varatharajah Kresanth, Chiu Rex Shun, Gazzarrini Sonia", "reference": { "type": "PubMed", "id": "29140438", "url": "https://pubmed.ncbi.nlm.nih.gov/29140438" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q38997-2", "protein_name": "SNF1-related protein kinase catalytic subunit alpha KIN10", "gene_name": "KIN10", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LW31-1", "protein_name": "B3 domain-containing transcription factor FUS3", "gene_name": "FUS3", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q38997", "url": "https://www.uniprot.org/uniprotkb/Q38997" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.29140438", "abstract": "", "glycosylation": [], 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Plant Microbe Interact.", "date": "2007", "authors": "Brader G\u00fcnter, Djamei Armin, Teige Markus, Palva E Tapio, Hirt Heribert", "reference": { "type": "PubMed", "id": "17506336", "url": "https://pubmed.ncbi.nlm.nih.gov/17506336" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39024-1", "protein_name": "Mitogen-activated protein kinase 4", "gene_name": "MPK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7U9-1", "protein_name": "Mitogen-activated protein kinase kinase 2", "gene_name": "MKK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39026-1", "protein_name": "Mitogen-activated protein kinase 6", "gene_name": "MPK6", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39024", "url": "https://www.uniprot.org/uniprotkb/Q39024" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Comprehensive analysis of protein-protein interactions between Arabidopsis MAPKs and MAPK kinases helps define potential MAPK signalling modules.", "journal": "Plant Signal. Behav.", "date": "2008", "authors": "Lee Jin Suk, Huh Kyung Won, Bhargava Apurva, Ellis Brian E", "reference": { "type": "PubMed", "id": "19513235", "url": "https://pubmed.ncbi.nlm.nih.gov/19513235" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39024-1", "protein_name": "Mitogen-activated protein kinase 4", "gene_name": "MPK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O23236-1", "protein_name": "Mitogen-activated protein kinase 14", "gene_name": "MPK14", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9C9U4-1", "protein_name": "Mitogen-activated protein kinase 15", "gene_name": "MPK15", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LMM5-1", "protein_name": "Mitogen-activated protein kinase 11", "gene_name": "MPK11", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O80396-1", "protein_name": "Mitogen-activated protein kinase kinase 3", "gene_name": "MKK3", "tax_name": "Mouse-ear cress" }, { 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Biophys. Res. Commun.", "date": "1998", "authors": "Ichimura K, Mizoguchi T, Irie K, Morris P, Giraudat J, Matsumoto K, Shinozaki K", "reference": { "type": "PubMed", "id": "9878570", "url": "https://pubmed.ncbi.nlm.nih.gov/9878570" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39024-1", "protein_name": "Mitogen-activated protein kinase 4", "gene_name": "MPK4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S7U9-1", "protein_name": "Mitogen-activated protein kinase kinase 2", "gene_name": "MKK2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q39008-1", "protein_name": "Mitogen-activated protein kinase kinase kinase 1", "gene_name": "MEKK1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q94A06-1", "protein_name": "Mitogen-activated protein kinase kinase 1", "gene_name": "MEK1; MKK1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39024", "url": "https://www.uniprot.org/uniprotkb/Q39024" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "mutagenesis": [ { "start_pos": 220, "end_pos": 220, "sequence_org": "T", "sequence_mut": "A", "comment": "Loss of interaction with MEKK1. Normal phosphorylation by MAPKKK5; when associated with A-226.", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U9", "url": "https://www.uniprot.org/uniprotkb/Q9S7U9" }, { "database": "PubMed", "id": "15225555", "url": "https://pubmed.ncbi.nlm.nih.gov/15225555" }, { "database": "PubMed", "id": "27679653", "url": "https://pubmed.ncbi.nlm.nih.gov/27679653" }, { "database": "PubMed", "id": "11875555", "url": "https://pubmed.ncbi.nlm.nih.gov/11875555" }, { "database": "PubMed", "id": "9878570", "url": "https://pubmed.ncbi.nlm.nih.gov/9878570" } ], "uniprot_canonical_ac": "Q9S7U9-1" }, { "start_pos": 220, "end_pos": 220, "sequence_org": "T", "sequence_mut": "E", "comment": "Constitutively active; when associated with E-226.", "evidence": [ { "database": "UniProtKB", "id": "Q9S7U9", "url": "https://www.uniprot.org/uniprotkb/Q9S7U9" }, { "database": "PubMed", "id": "15225555", "url": "https://pubmed.ncbi.nlm.nih.gov/15225555" }, { "database": "PubMed", "id": "11875555", "url": "https://pubmed.ncbi.nlm.nih.gov/11875555" }, { "database": "PubMed", "id": "9878570", "url": "https://pubmed.ncbi.nlm.nih.gov/9878570" } ], "uniprot_canonical_ac": "Q9S7U9-1" }, { "start_pos": 226, "end_pos": 226, "sequence_org": "T", "sequence_mut": "A", "comment": "Loss of interaction with MEKK1. 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J.", "date": "2001", "authors": "Petit J M, Briat J F, Lobr\u00e9aux S", "reference": { "type": "PubMed", "id": "11672431", "url": "https://pubmed.ncbi.nlm.nih.gov/11672431" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39101-1", "protein_name": "Ferritin-1, chloroplastic", "gene_name": "FER1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9SRL5-1", "protein_name": "Ferritin-2, chloroplastic", "gene_name": "FER2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LYN2-1", "protein_name": "Ferritin-3, chloroplastic", "gene_name": "FER3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9S756-1", "protein_name": "Ferritin-4, chloroplastic", "gene_name": "FER4", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39101", "url": "https://www.uniprot.org/uniprotkb/Q39101" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.11672431", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Arabidopsis ferritin 1 (AtFer1) gene regulation by the phosphate starvation response 1 (AtPHR1) transcription factor reveals a direct molecular link between iron and phosphate homeostasis.", "journal": "J. Biol. 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J.", "date": "1996", "authors": "Gaymard F, Boucherez J, Briat J F", "reference": { "type": "PubMed", "id": "8761454", "url": "https://pubmed.ncbi.nlm.nih.gov/8761454" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39101-1", "protein_name": "Ferritin-1, chloroplastic", "gene_name": "FER1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39101", "url": "https://www.uniprot.org/uniprotkb/Q39101" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.8761454", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A myosin family tree.", "journal": "J. 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Biol. Chem.", "date": "2007", "authors": "Li Jian-Feng, Nebenf\u00fchr Andreas", "reference": { "type": "PubMed", "id": "17500056", "url": "https://pubmed.ncbi.nlm.nih.gov/17500056" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39160-1", "protein_name": "Myosin-5", "gene_name": "XI-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q9LKB9-1", "protein_name": "Myosin-6", "gene_name": "MYA2; XI-2", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "Q0WPU1-1", "protein_name": "Myosin-15", "gene_name": "XI-I", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5J1-1", "protein_name": "Myosin-17", "gene_name": "XI-K; XIK", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39160", "url": "https://www.uniprot.org/uniprotkb/Q39160" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17500056", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 4 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", 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{ "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Enzymatic activity and motility of recombinant Arabidopsis myosin XI, MYA1.", "journal": "Plant & cell physiology", "date": "2007-06", "authors": "Hachikubo You, Ito Kohji, Schiefelbein John, Manstein Dietmar J, Yamamoto Keiichi", "reference": { "type": "PubMed", "id": "17504816", "url": "https://pubmed.ncbi.nlm.nih.gov/17504816" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39160-1", "protein_name": "Myosin-5", "gene_name": "XI-1", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39160", "url": "https://www.uniprot.org/uniprotkb/Q39160" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.17504816", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { 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Natl. Acad. Sci. U.S.A.", "date": "2017", "authors": "Kurth Elizabeth G, Peremyslov Valera V, Turner Hannah L, Makarova Kira S, Iranzo Jaime, Mekhedov Sergei L, Koonin Eugene V, Dolja Valerian V", "reference": { "type": "PubMed", "id": "28096376", "url": "https://pubmed.ncbi.nlm.nih.gov/28096376" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q39160-1", "protein_name": "Myosin-5", "gene_name": "XI-1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4IRM4-1", "protein_name": "Protein PHOX1", "gene_name": "PHOX1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K487-1", "protein_name": "Protein PHOX3", "gene_name": "PHOX3", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4JTI1-1", "protein_name": "Protein PHOX4", "gene_name": "PHOX4", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "O48802-1", "protein_name": "Protein CLMP1", "gene_name": "CLMP1", "tax_name": "Mouse-ear cress" }, { "uniprot_canonical_ac": "F4K5J1-1", "protein_name": "Myosin-17", "gene_name": "XI-K; XIK", "tax_name": "Mouse-ear cress" } ], "species": [ { "name": "Arabidopsis thaliana", "taxid": 3702, "evidence": [ { "database": "UniProtKB", "id": "Q39160", "url": "https://www.uniprot.org/uniprotkb/Q39160" } ], "common_name": "Mouse-ear cress", "glygen_name": "Arabidopsis", "reference_species": "Arabidopsis thaliana [3702]" } ], "record_id": "pubmed.28096376", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 6 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A myosin from a higher plant has structural similarities to class V myosins.", "journal": "J. 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