[ { "title": "Characterization of an acyl-coA thioesterase that functions as a major regulator of peroxisomal lipid metabolism.", "journal": "The Journal of biological chemistry", "date": "2002", "authors": "Hunt MC, Solaas K, Kase BF, Alexson SE", "reference": { "type": "PubMed", "id": "11673457", "url": "https://pubmed.ncbi.nlm.nih.gov/11673457" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17516-1", "protein_name": "Aldo-keto reductase family 1 member C4", "gene_name": "AKR1C4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": 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"gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Farnesoid X receptor and bile salts are involved in transcriptional regulation of the gene encoding the human bile salt export pump.", "journal": "Hepatology (Baltimore, Md.)", "date": "2002", "authors": "Plass JR, Mol O, Heegsma J, Geuken M, Faber KN, Jansen PL, Muller M", "reference": { "type": "PubMed", "id": "11870371", "url": "https://pubmed.ncbi.nlm.nih.gov/11870371" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { 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"tax_name": "Human" }, { "uniprot_canonical_ac": "P46721-1", "protein_name": "Solute carrier organic anion transporter family member 1A2", "gene_name": "SLCO1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51161-1", "protein_name": "Gastrotropin", "gene_name": "FABP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02768-1", "protein_name": "Albumin", "gene_name": "ALB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSY2-1", "protein_name": "StAR-related lipid transfer protein 5", "gene_name": "STARD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12908-1", "protein_name": "Ileal sodium/bile acid cotransporter", "gene_name": "SLC10A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", 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II. The binding of cholanic acids by human plasma proteins.", "journal": "The Journal of clinical investigation", "date": "1957", "authors": "RUDMAN D, KENDALL FE", "reference": { "type": "PubMed", "id": "13416382", "url": "https://pubmed.ncbi.nlm.nih.gov/13416382" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14973-1", "protein_name": "Hepatic sodium/bile acid cotransporter", "gene_name": "SLC10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "SLC51B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW1-1", "protein_name": "Organic solute transporter subunit alpha", "gene_name": "SLC51A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPD5-1", "protein_name": "Solute carrier organic anion transporter family member 1B3", "gene_name": "SLCO1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L6-1", "protein_name": "Solute carrier organic anion transporter family member 1B1", "gene_name": "SLCO1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46721-1", "protein_name": "Solute carrier organic anion transporter family member 1A2", "gene_name": "SLCO1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51161-1", "protein_name": "Gastrotropin", "gene_name": "FABP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02768-1", "protein_name": "Albumin", "gene_name": "ALB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSY2-1", "protein_name": "StAR-related lipid transfer protein 5", "gene_name": "STARD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12908-1", "protein_name": "Ileal sodium/bile acid cotransporter", "gene_name": "SLC10A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15438-1", "protein_name": "ATP-binding cassette sub-family C member 3", "gene_name": "ABCC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.13416382", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", 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of biological chemistry", "date": "1992", "authors": "Ishida H, Noshiro M, Okuda K, Coon MJ", "reference": { "type": "PubMed", "id": "1400444", "url": "https://pubmed.ncbi.nlm.nih.gov/1400444" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17516-1", "protein_name": "Aldo-keto reductase family 1 member C4", "gene_name": "AKR1C4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42330-1", "protein_name": "Aldo-keto reductase family 1 member C3", "gene_name": "AKR1C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52895-1", "protein_name": "Aldo-keto reductase family 1 member C2", "gene_name": "AKR1C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75881-1", "protein_name": "Cytochrome P450 7B1", "gene_name": "CYP7B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22680-1", "protein_name": "Cytochrome P450 7A1", "gene_name": "CYP7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYL5-1", "protein_name": "24-hydroxycholesterol 7-alpha-hydroxylase", "gene_name": "CYP39A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNU6-1", "protein_name": "7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase", "gene_name": "CYP8B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02318-1", "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "CYP27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6A2-1", "protein_name": "Cholesterol 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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"Hepatology (Baltimore, Md.)", "date": "2005", "authors": "Ballatori N, Christian WV, Lee JY, Dawson PA, Soroka CJ, Boyer JL, Madejczyk MS, Li N", "reference": { "type": "PubMed", "id": "16317684", "url": "https://pubmed.ncbi.nlm.nih.gov/16317684" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14973-1", "protein_name": "Hepatic sodium/bile acid cotransporter", "gene_name": "SLC10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "SLC51B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8R000-1", "protein_name": "Organic solute transporter subunit alpha", "gene_name": "Slc51a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q86UW1-1", "protein_name": "Organic solute transporter subunit alpha", "gene_name": "SLC51A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPD5-1", "protein_name": "Solute carrier organic anion transporter family member 1B3", "gene_name": "SLCO1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L6-1", "protein_name": "Solute carrier organic anion transporter family member 1B1", "gene_name": "SLCO1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q80WK2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "Slc51b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P46721-1", "protein_name": "Solute carrier organic anion transporter family member 1A2", "gene_name": "SLCO1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51161-1", "protein_name": "Gastrotropin", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "FXR, a multipurpose nuclear receptor.", "journal": "Trends in biochemical sciences", "date": "2006", "authors": "Lee FY, Lee H, Hubbert ML, Edwards PA, Zhang Y", "reference": { "type": "PubMed", "id": "16908160", "url": "https://pubmed.ncbi.nlm.nih.gov/16908160" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14973-1", "protein_name": "Hepatic sodium/bile acid cotransporter", "gene_name": "SLC10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "SLC51B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic 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"url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.16908160", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of human sterol 27-hydroxylase. A mitochondrial cytochrome P-450 that catalyzes multiple oxidation reaction in bile acid biosynthesis.", "journal": "The Journal of biological chemistry", "date": "1991", "authors": "Cali JJ, Russell DW", "reference": { "type": "PubMed", "id": "1708392", "url": "https://pubmed.ncbi.nlm.nih.gov/1708392" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22570-1", "protein_name": "NADPH:adrenodoxin oxidoreductase, mitochondrial", "gene_name": "FDXR", "tax_name": "Human" }, { "uniprot_canonical_ac": "A9YTQ3-1", "protein_name": "Aryl hydrocarbon receptor repressor", "gene_name": "AHRR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17516-1", "protein_name": "Aldo-keto reductase 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RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75881-1", "protein_name": "Cytochrome P450 7B1", "gene_name": "CYP7B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P11511-1", "protein_name": "Aromatase", "gene_name": "CYP19A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22680-1", "protein_name": "Cytochrome P450 7A1", "gene_name": "CYP7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYL5-1", "protein_name": "24-hydroxycholesterol 7-alpha-hydroxylase", "gene_name": "CYP39A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16678-1", "protein_name": "Cytochrome P450 1B1", "gene_name": "CYP1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNU6-1", "protein_name": "7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase", "gene_name": "CYP8B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02318-1", "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "CYP27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P15538-1", "protein_name": "Cytochrome P450 11B1, mitochondrial", "gene_name": "CYP11B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P01189-1", "protein_name": "Pro-opiomelanocortin", "gene_name": "POMC", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6A2-1", "protein_name": "Cholesterol 24-hydroxylase", "gene_name": "CYP46A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F3-1", "protein_name": "3 beta-hydroxysteroid dehydrogenase type 7", "gene_name": "HSD3B7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P10109-1", "protein_name": "Adrenodoxin, mitochondrial", "gene_name": "FDX1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51857-1", "protein_name": "Aldo-keto reductase family 1 member D1", "gene_name": "AKR1D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P08686-1", "protein_name": "Steroid 21-hydroxylase", "gene_name": "CYP21A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P05108-1", "protein_name": "Cholesterol side-chain cleavage enzyme, mitochondrial", "gene_name": "CYP11A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q16850-1", "protein_name": "Lanosterol 14-alpha demethylase", "gene_name": "CYP51A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6ZWL3-1", "protein_name": "Cytochrome P450 4V2", "gene_name": "CYP4V2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19099-1", "protein_name": "Cytochrome P450 11B2, mitochondrial", "gene_name": "CYP11B2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6P4F2-1", "protein_name": "Ferredoxin-2, mitochondrial", "gene_name": "FDX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.1708392", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 40 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Heterodimerization, trafficking and membrane topology of the two proteins, Ost alpha and Ost beta, that constitute the organic solute and steroid transporter.", "journal": "The Biochemical journal", "date": "2007", "authors": "Li N, Cui Z, Fang F, Lee JY, Ballatori N", "reference": { "type": "PubMed", "id": "17650074", "url": "https://pubmed.ncbi.nlm.nih.gov/17650074" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14973-1", "protein_name": "Hepatic sodium/bile acid cotransporter", "gene_name": "SLC10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "SLC51B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8R000-1", "protein_name": "Organic solute transporter subunit alpha", "gene_name": "Slc51a", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q86UW1-1", "protein_name": "Organic solute transporter subunit alpha", "gene_name": "SLC51A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPD5-1", "protein_name": "Solute carrier organic anion transporter family member 1B3", "gene_name": "SLCO1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L6-1", "protein_name": "Solute carrier organic anion transporter family member 1B1", "gene_name": "SLCO1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q80WK2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "Slc51b", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P46721-1", "protein_name": "Solute carrier organic anion transporter family member 1A2", "gene_name": "SLCO1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51161-1", "protein_name": "Gastrotropin", "gene_name": "FABP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02768-1", "protein_name": "Albumin", "gene_name": "ALB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSY2-1", "protein_name": "StAR-related lipid transfer protein 5", "gene_name": "STARD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12908-1", "protein_name": "Ileal sodium/bile acid cotransporter", "gene_name": "SLC10A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15438-1", "protein_name": "ATP-binding cassette sub-family C member 3", "gene_name": "ABCC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17650074", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 20 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"AKR1C4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42330-1", "protein_name": "Aldo-keto reductase family 1 member C3", "gene_name": "AKR1C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52895-1", "protein_name": "Aldo-keto reductase family 1 member C2", "gene_name": "AKR1C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75881-1", "protein_name": "Cytochrome P450 7B1", "gene_name": "CYP7B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22680-1", "protein_name": "Cytochrome P450 7A1", "gene_name": "CYP7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYL5-1", "protein_name": "24-hydroxycholesterol 7-alpha-hydroxylase", "gene_name": "CYP39A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNU6-1", "protein_name": "7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase", "gene_name": "CYP8B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02318-1", "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "CYP27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6A2-1", "protein_name": "Cholesterol 24-hydroxylase", "gene_name": "CYP46A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F3-1", "protein_name": "3 beta-hydroxysteroid dehydrogenase type 7", "gene_name": "HSD3B7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51857-1", "protein_name": "Aldo-keto reductase family 1 member D1", "gene_name": "AKR1D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 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"Purification and characterization of bile acid-CoA:amino acid N-acyltransferase from human liver.", "journal": "The Journal of biological chemistry", "date": "1991", "authors": "Johnson MR, Barnes S, Kwakye JB, Diasio RB", "reference": { "type": "PubMed", "id": "2037576", "url": "https://pubmed.ncbi.nlm.nih.gov/2037576" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14973-1", "protein_name": "Hepatic sodium/bile acid cotransporter", "gene_name": "SLC10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "SLC51B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": 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"sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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screening assay for human long-chain fatty acid transport proteins 4 and 5.", "journal": "Journal of biomolecular screening", "date": "2010-06", "authors": "Zhou Wei, Madrid Peter, Fluitt Amy, Stahl Andreas, Xie Xinmin Simon", "reference": { "type": "PubMed", "id": "20448275", "url": "https://pubmed.ncbi.nlm.nih.gov/20448275" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q91VE0-1", "protein_name": "Long-chain fatty acid transport protein 4", "gene_name": "Slc27a4", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q6P1M0-1", "protein_name": "Long-chain fatty acid transport protein 4", "gene_name": "SLC27A4", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20448275", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "FATP2 is a hepatic fatty acid transporter and peroxisomal very long-chain acyl-CoA synthetase.", "journal": "American journal of physiology. Endocrinology and metabolism", "date": "2010-09", "authors": "Falcon Alaric, Doege Holger, Fluitt Amy, Tsang Bernice, Watson Nicki, Kay Mark A, Stahl Andreas", "reference": { "type": "PubMed", "id": "20530735", "url": "https://pubmed.ncbi.nlm.nih.gov/20530735" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6PCB7-1", "protein_name": "Long-chain fatty acid transport protein 1", "gene_name": "SLC27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "O35488-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "Slc27a2", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", 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"NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSY2-1", "protein_name": "StAR-related lipid transfer protein 5", "gene_name": "STARD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12908-1", "protein_name": "Ileal sodium/bile acid cotransporter", "gene_name": "SLC10A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15438-1", "protein_name": "ATP-binding cassette sub-family C member 3", "gene_name": "ABCC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": 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STARD1 and STARD4 subfamilies.", "journal": "Molecular and cellular endocrinology", "date": "2013", "authors": "Letourneau D, Lefebvre A, Lavigne P, LeHoux JG", "reference": { "type": "PubMed", "id": "23337244", "url": "https://pubmed.ncbi.nlm.nih.gov/23337244" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14973-1", "protein_name": "Hepatic sodium/bile acid cotransporter", "gene_name": "SLC10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "SLC51B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW1-1", "protein_name": "Organic solute transporter subunit alpha", "gene_name": "SLC51A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPD5-1", "protein_name": "Solute carrier organic anion transporter family member 1B3", "gene_name": "SLCO1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L6-1", "protein_name": "Solute carrier organic anion transporter family member 1B1", "gene_name": "SLCO1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46721-1", "protein_name": "Solute carrier organic anion transporter family member 1A2", "gene_name": "SLCO1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51161-1", "protein_name": "Gastrotropin", "gene_name": "FABP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02768-1", "protein_name": "Albumin", "gene_name": "ALB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSY2-1", "protein_name": "StAR-related lipid transfer protein 5", "gene_name": "STARD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12908-1", "protein_name": "Ileal sodium/bile acid cotransporter", "gene_name": "SLC10A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15438-1", "protein_name": "ATP-binding cassette sub-family C member 3", "gene_name": "ABCC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.23337244", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", 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"uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.2384150", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 22 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", 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Activates Hepatic Stellate Cells and Promotes Liver Fibrosis via Unconjugated Cholic Acid.", "journal": "Advanced science (Weinheim, Baden-Wurttemberg, Germany)", "date": "2024-01", "authors": "Wu Kang, Liu Yi, Xia Jie, Liu Jiale, Wang Kai, Liang Huijun, Xu Fengli, Liu Dina, Nie Dan, Tang Xin, Huang Ailong, Chen Chang, Tang Ni", "reference": { "type": "PubMed", "id": "37957540", "url": "https://pubmed.ncbi.nlm.nih.gov/37957540" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q4LDG0-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "Slc27a5", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", 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science (Weinheim, Baden-Wurttemberg, Germany)", "date": "2024-02", "authors": "Nie Dan, Tang Xin, Deng Haijun, Yang Xiaojun, Tao Junji, Xu Fengli, Liu Yi, Wu Kang, Wang Kai, Mei Zhechuan, Huang Ailong, Tang Ni", "reference": { "type": "PubMed", "id": "38059827", "url": "https://pubmed.ncbi.nlm.nih.gov/38059827" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "P48426-1", "protein_name": "Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha", "gene_name": "PIP4K2A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.38059827", "abstract": "", 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"7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase", "gene_name": "CYP8B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02318-1", "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "CYP27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P70473-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "Amacr", "tax_name": "Rat" }, { "uniprot_canonical_ac": "Q9Y6A2-1", "protein_name": "Cholesterol 24-hydroxylase", "gene_name": "CYP46A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F3-1", "protein_name": "3 beta-hydroxysteroid dehydrogenase type 7", "gene_name": "HSD3B7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51857-1", "protein_name": "Aldo-keto reductase family 1 member D1", "gene_name": "AKR1D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUZ1-1", "protein_name": "Acyl-coenzyme A oxidase-like protein", "gene_name": "ACOXL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.7649182", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 29 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Glycine and taurine conjugation of bile acids by a single enzyme. Molecular cloning and expression of human liver bile acid CoA:amino acid N-acyltransferase.", "journal": "The Journal of biological chemistry", "date": "1994", "authors": "Falany CN, Johnson MR, Barnes S, Diasio RB", "reference": { "type": "PubMed", "id": "8034703", "url": "https://pubmed.ncbi.nlm.nih.gov/8034703" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17516-1", "protein_name": "Aldo-keto reductase family 1 member C4", "gene_name": "AKR1C4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42330-1", "protein_name": "Aldo-keto reductase family 1 member C3", "gene_name": "AKR1C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52895-1", "protein_name": "Aldo-keto reductase family 1 member C2", "gene_name": "AKR1C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14973-1", "protein_name": "Hepatic sodium/bile acid cotransporter", "gene_name": "SLC10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "SLC51B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75881-1", "protein_name": "Cytochrome P450 7B1", "gene_name": "CYP7B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22680-1", "protein_name": "Cytochrome P450 7A1", "gene_name": "CYP7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNU6-1", "protein_name": "7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase", "gene_name": "CYP8B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02318-1", "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "CYP27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW1-1", "protein_name": "Organic solute transporter subunit alpha", "gene_name": "SLC51A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPD5-1", "protein_name": "Solute carrier organic anion transporter family member 1B3", "gene_name": "SLCO1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L6-1", "protein_name": "Solute carrier organic anion transporter family member 1B1", "gene_name": "SLCO1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46721-1", "protein_name": "Solute carrier organic anion transporter family member 1A2", "gene_name": "SLCO1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51161-1", "protein_name": "Gastrotropin", "gene_name": "FABP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F3-1", "protein_name": "3 beta-hydroxysteroid dehydrogenase type 7", "gene_name": "HSD3B7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51857-1", "protein_name": "Aldo-keto reductase family 1 member D1", "gene_name": "AKR1D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02768-1", "protein_name": "Albumin", "gene_name": "ALB", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSY2-1", "protein_name": "StAR-related lipid transfer protein 5", "gene_name": "STARD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12908-1", "protein_name": "Ileal sodium/bile acid cotransporter", "gene_name": "SLC10A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15438-1", "protein_name": "ATP-binding cassette sub-family C member 3", "gene_name": "ABCC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8034703", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 33 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning, chromosomal localization, and functional characterization of a human liver Na+/bile acid cotransporter.", "journal": "The Journal of clinical investigation", "date": "1994", "authors": "Hagenbuch B, Meier PJ", "reference": { "type": "PubMed", "id": "8132774", "url": "https://pubmed.ncbi.nlm.nih.gov/8132774" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14973-1", "protein_name": "Hepatic sodium/bile acid cotransporter", "gene_name": "SLC10A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW2-1", "protein_name": "Organic solute transporter subunit beta", "gene_name": "SLC51B", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UW1-1", "protein_name": "Organic solute transporter subunit alpha", "gene_name": "SLC51A", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NPD5-1", "protein_name": "Solute carrier organic anion transporter family member 1B3", "gene_name": "SLCO1B3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6L6-1", "protein_name": "Solute carrier organic anion transporter family member 1B1", "gene_name": "SLCO1B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P46721-1", "protein_name": "Solute carrier organic anion transporter family member 1A2", "gene_name": "SLCO1A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51161-1", "protein_name": "Gastrotropin", "gene_name": "FABP6", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02768-1", "protein_name": "Albumin", "gene_name": "ALB", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NSY2-1", "protein_name": "StAR-related lipid transfer protein 5", "gene_name": "STARD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q12908-1", "protein_name": "Ileal sodium/bile acid cotransporter", "gene_name": "SLC10A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15438-1", "protein_name": "ATP-binding cassette sub-family C member 3", "gene_name": "ABCC3", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8132774", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 18 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The CoA esters of 2-methyl-branched chain fatty acids and of the bile acid intermediates di- and trihydroxycoprostanic acids are oxidized by one single peroxisomal branched chain acyl-CoA oxidase in human liver and kidney.", "journal": "The Journal of biological chemistry", "date": "1993", "authors": "Vanhove GF, Van Veldhoven PP, Fransen M, Denis S, Eyssen HJ, Wanders RJ, Mannaerts GP", "reference": { "type": "PubMed", "id": "8387517", "url": "https://pubmed.ncbi.nlm.nih.gov/8387517" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17516-1", "protein_name": "Aldo-keto reductase family 1 member C4", "gene_name": "AKR1C4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42330-1", "protein_name": "Aldo-keto reductase family 1 member C3", "gene_name": "AKR1C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52895-1", "protein_name": "Aldo-keto reductase family 1 member C2", "gene_name": "AKR1C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75881-1", "protein_name": "Cytochrome P450 7B1", "gene_name": "CYP7B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22680-1", "protein_name": "Cytochrome P450 7A1", "gene_name": "CYP7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNU6-1", "protein_name": "7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase", "gene_name": "CYP8B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02318-1", "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "CYP27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F3-1", "protein_name": "3 beta-hydroxysteroid dehydrogenase type 7", "gene_name": "HSD3B7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51857-1", "protein_name": "Aldo-keto reductase family 1 member D1", "gene_name": "AKR1D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUZ1-1", "protein_name": "Acyl-coenzyme A oxidase-like protein", "gene_name": "ACOXL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8387517", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 26 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Purification and properties of human D-3-hydroxyacyl-CoA dehydratase: medium-chain enoyl-CoA hydratase is D-3-hydroxyacyl-CoA dehydratase.", "journal": "Journal of biochemistry", "date": "1996", "authors": "Jiang LL, Kobayashi A, Matsuura H, Fukushima H, Hashimoto T", "reference": { "type": "PubMed", "id": "8902629", "url": "https://pubmed.ncbi.nlm.nih.gov/8902629" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17516-1", "protein_name": "Aldo-keto reductase family 1 member C4", "gene_name": "AKR1C4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42330-1", "protein_name": "Aldo-keto reductase family 1 member C3", "gene_name": "AKR1C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52895-1", "protein_name": "Aldo-keto reductase family 1 member C2", "gene_name": "AKR1C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75881-1", "protein_name": "Cytochrome P450 7B1", "gene_name": "CYP7B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22680-1", "protein_name": "Cytochrome P450 7A1", "gene_name": "CYP7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNU6-1", "protein_name": "7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase", "gene_name": "CYP8B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02318-1", "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "CYP27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F3-1", "protein_name": "3 beta-hydroxysteroid dehydrogenase type 7", "gene_name": "HSD3B7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51857-1", "protein_name": "Aldo-keto reductase family 1 member D1", "gene_name": "AKR1D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q08426-1", "protein_name": "Peroxisomal bifunctional enzyme", "gene_name": "EHHADH", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P09110-1", "protein_name": "3-ketoacyl-CoA thiolase, peroxisomal", "gene_name": "ACAA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUI1-1", "protein_name": "Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]", "gene_name": "DECR2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8N9L9-1", "protein_name": "Peroxisomal succinyl-coenzyme A thioesterase", "gene_name": "ACOT4", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33897-1", "protein_name": "ATP-binding cassette sub-family D member 1", "gene_name": "ABCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" }, { "uniprot_canonical_ac": "O15254-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 3", "gene_name": "ACOX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NUZ1-1", "protein_name": "Acyl-coenzyme A oxidase-like protein", "gene_name": "ACOXL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.8902629", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 31 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular characterization of the human peroxisomal branched-chain acyl-CoA oxidase: cDNA cloning, chromosomal assignment, tissue distribution, and evidence for the absence of the protein in Zellweger syndrome.", "journal": "Proceedings of the National Academy of Sciences of the United States of America", "date": "1996", "authors": "Baumgart E, Vanhooren JC, Fransen M, Marynen P, Puype M, Vandekerckhove J, Leunissen JA, Fahimi HD, Mannaerts GP, van Veldhoven PP", "reference": { "type": "PubMed", "id": "8943006", "url": "https://pubmed.ncbi.nlm.nih.gov/8943006" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y2P5-1", "protein_name": "Long-chain fatty acid transport protein 5", "gene_name": "SLC27A5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15596-1", "protein_name": "Nuclear receptor coactivator 2", "gene_name": "NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17516-1", "protein_name": "Aldo-keto reductase family 1 member C4", "gene_name": "AKR1C4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42330-1", "protein_name": "Aldo-keto reductase family 1 member C3", "gene_name": "AKR1C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52895-1", "protein_name": "Aldo-keto reductase family 1 member C2", "gene_name": "AKR1C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75881-1", "protein_name": "Cytochrome P450 7B1", "gene_name": "CYP7B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22680-1", "protein_name": "Cytochrome P450 7A1", "gene_name": "CYP7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNU6-1", "protein_name": "7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase", "gene_name": "CYP8B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02318-1", "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "CYP27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F3-1", "protein_name": "3 beta-hydroxysteroid dehydrogenase type 7", "gene_name": "HSD3B7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51857-1", "protein_name": "Aldo-keto reductase family 1 member D1", "gene_name": "AKR1D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P43155-1", "protein_name": "Carnitine O-acetyltransferase", "gene_name": "CRAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UKG9-1", "protein_name": "Peroxisomal carnitine O-octanoyltransferase", "gene_name": "CROT", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" }, { 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"NCOA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P17516-1", "protein_name": "Aldo-keto reductase family 1 member C4", "gene_name": "AKR1C4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q04828-1", "protein_name": "Aldo-keto reductase family 1 member C1", "gene_name": "AKR1C1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P42330-1", "protein_name": "Aldo-keto reductase family 1 member C3", "gene_name": "AKR1C3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P52895-1", "protein_name": "Aldo-keto reductase family 1 member C2", "gene_name": "AKR1C2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P19793-1", "protein_name": "Retinoic acid receptor RXR-alpha", "gene_name": "RXRA", "tax_name": "Human" }, { "uniprot_canonical_ac": "O75881-1", "protein_name": "Cytochrome P450 7B1", "gene_name": "CYP7B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P22680-1", "protein_name": "Cytochrome P450 7A1", "gene_name": "CYP7A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NYL5-1", "protein_name": "24-hydroxycholesterol 7-alpha-hydroxylase", "gene_name": "CYP39A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UNU6-1", "protein_name": "7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase", "gene_name": "CYP8B1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q02318-1", "protein_name": "Sterol 26-hydroxylase, mitochondrial", "gene_name": "CYP27A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6A2-1", "protein_name": "Cholesterol 24-hydroxylase", "gene_name": "CYP46A1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H2F3-1", "protein_name": "3 beta-hydroxysteroid dehydrogenase type 7", "gene_name": "HSD3B7", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99424-1", "protein_name": "Peroxisomal acyl-coenzyme A oxidase 2", "gene_name": "ACOX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51857-1", "protein_name": "Aldo-keto reductase family 1 member D1", "gene_name": "AKR1D1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UHK6-1", "protein_name": "Alpha-methylacyl-CoA racemase", "gene_name": "AMACR", "tax_name": "Human" }, { "uniprot_canonical_ac": "P51659-1", "protein_name": "Peroxisomal multifunctional enzyme type 2", "gene_name": "HSD17B4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q96RI1-3", "protein_name": "Bile acid receptor", "gene_name": "NR1H4", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14975-1", "protein_name": "Long-chain fatty acid transport protein 2", "gene_name": "SLC27A2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q14032-1", "protein_name": "Bile acid-CoA:amino acid N-acyltransferase", "gene_name": "BAAT", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q15788-1", "protein_name": "Nuclear receptor coactivator 1", "gene_name": "NCOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O14734-1", "protein_name": "Acyl-coenzyme A thioesterase 8", "gene_name": "ACOT8", "tax_name": "Human" }, { "uniprot_canonical_ac": "O95342-1", "protein_name": "Bile salt export pump", "gene_name": "ABCB11", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y2P5", "url": "https://www.uniprot.org/uniprotkb/Q9Y2P5" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.9660774", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 24 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Bi-allelic Mutations in the Mitochondrial Ribosomal Protein MRPS2 Cause Sensorineural Hearing Loss, Hypoglycemia, and Multiple OXPHOS Complex Deficiencies.", "journal": "American journal of human genetics", "date": "2018", "authors": "Gardeitchik T, Mohamed M, Ruzzenente B, Karall D, Guerrero-Castillo S, Dalloyaux D, van den Brand M, van Kraaij S, van Asbeck E, Assouline Z, Rio M, de Lonlay P, Scholl-Buergi S, Wolthuis DFGJ, Hoischen A, Rodenburg RJ, Sperl W, Urban Z, Brandt U, Mayr JA, Wong S, de Brouwer APM, Nijtmans L, Munnich A, Rotig A, Wevers RA, Metodiev MD, Morava E", "reference": { "type": "PubMed", "id": "29576219", "url": "https://pubmed.ncbi.nlm.nih.gov/29576219" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y399-1", "protein_name": "Small ribosomal subunit protein uS2m", "gene_name": "MRPS2", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site.", "journal": "EMBO J.", "date": "2001", "authors": "Will CL, Schneider C, MacMillan AM, Katopodis NF, Neubauer G, Wilm M, Luhrmann R, Query CC", "reference": { "type": "PubMed", "id": "11500380", "url": "https://pubmed.ncbi.nlm.nih.gov/11500380" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9Y3B4-1", "protein_name": "Splicing factor 3B subunit 6", "gene_name": "SF3B6", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9Y3B4", "url": "https://www.uniprot.org/uniprotkb/Q9Y3B4" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.11500380", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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cachexia via regulating hypothalamic pro-opiomelanocortin neurons.", "journal": "FASEB journal : official publication of the Federation of American Societies for Experimental Biology", "date": "2023-06", "authors": "Zhang Yanni, Xi Qiulei, Zhong Ming, Jiang Yi, Zhuang Qiulin, Ding Zuoyou, Tan Shanjun, Wang Junjie, Liu Hao, Zhang Zhige, Zhou Ben, Wu Guohao", "reference": { "type": "PubMed", "id": "37219490", "url": "https://pubmed.ncbi.nlm.nih.gov/37219490" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95025-1", "protein_name": "Semaphorin-3D", "gene_name": "SEMA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BH34-1", "protein_name": "Semaphorin-3D", "gene_name": "Sema3d", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95025", "url": "https://www.uniprot.org/uniprotkb/O95025" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens 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Funes Vanessa, Davuluri Sanjana, Ibanez Hector E, Sun Wei-Chih, Fu Juan, Li Keyu, Muth Stephen, Pan Xingyi, Fujiwara Kenji, Dwayne L Thomas Ii , Henderson MacKenzie, Teh Selina Shiqing, Zhu Qingfeng, Thompson Elizabeth, Jaffee Elizabeth M, Kolodkin Alex, Meng Fengxi, Zheng Lei", "reference": { "type": "PubMed", "id": "39413197", "url": "https://pubmed.ncbi.nlm.nih.gov/39413197" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O95025-1", "protein_name": "Semaphorin-3D", "gene_name": "SEMA3D", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8BH34-1", "protein_name": "Semaphorin-3D", "gene_name": "Sema3d", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O95025", "url": "https://www.uniprot.org/uniprotkb/O95025" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.39413197", "abstract": "", "glycosylation": 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idiopathic small fiber neuropathy.", "journal": "Journal of neurophysiology", "date": "2021", "authors": "Alsaloum M, Labau JIR, Sosniak D, Zhao P, Almomani R, Gerrits M, Hoeijmakers JGJ, Lauria G, Faber CG, Waxman SG, Dib-Hajj S", "reference": { "type": "PubMed", "id": "34320850", "url": "https://pubmed.ncbi.nlm.nih.gov/34320850" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O60939-1", "protein_name": "Sodium channel regulatory subunit beta-2", "gene_name": "SCN2B", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O60939", "url": "https://www.uniprot.org/uniprotkb/O60939" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.34320850", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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myotonia.", "journal": "FEBS letters", "date": "1999", "authors": "Wang DW, VanDeCarr D, Ruben PC, George AL Jr, Bennett PB", "reference": { "type": "PubMed", "id": "10218481", "url": "https://pubmed.ncbi.nlm.nih.gov/10218481" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35499-1", "protein_name": "Sodium channel protein type 4 subunit alpha", "gene_name": "SCN4A", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P35499", "url": "https://www.uniprot.org/uniprotkb/P35499" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10218481", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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