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Part A", "date": "2020", "authors": "Maddirevula S, Ben-Omran T, AlMureikhi M, Eyaid W, Arabi H, Alkuraya H, Alfaifi A, Alfalah AH, Alsaif HS, Abdulwahab F, Alfadhel M, Alkuraya FS", "reference": { "type": "PubMed", "id": "32965080", "url": "https://pubmed.ncbi.nlm.nih.gov/32965080" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9NXG6-1", "protein_name": "Transmembrane prolyl 4-hydroxylase", "gene_name": "P4HTM", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q9NXG6", "url": "https://www.uniprot.org/uniprotkb/Q9NXG6" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.32965080", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "TRIM59 regulates autophagy through modulating both the transcription and the ubiquitination of BECN1.", "journal": "Autophagy", "date": "2018", "authors": "Han Tianyu, Guo Meng, Gan Mingxi, Yu Bentong, Tian Xiaoli, Wang Jian-Bin", "reference": { "type": "PubMed", "id": "30231667", "url": "https://pubmed.ncbi.nlm.nih.gov/30231667" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8IWR1-1", "protein_name": "Tripartite motif-containing protein 59", "gene_name": "TRIM59", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q8IWR1", "url": "https://www.uniprot.org/uniprotkb/Q8IWR1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.30231667", "abstract": "", "glycosylation": 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reading frame.", "journal": "PLoS ONE", "date": "2009", "authors": "Maas Stefan, Gommans Willemijn M", "reference": { "type": "PubMed", "id": "19156214", "url": "https://pubmed.ncbi.nlm.nih.gov/19156214" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P78563-1", "protein_name": "Double-stranded RNA-specific editase 1", "gene_name": "ADARB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q91ZS8-1", "protein_name": "Double-stranded RNA-specific editase 1", "gene_name": "Adarb1", "tax_name": "Mouse" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P78563", "url": "https://www.uniprot.org/uniprotkb/P78563" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.19156214", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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"o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Functions and regulation of RNA editing by ADAR deaminases.", "journal": "Annu. Rev. Biochem.", "date": "2010", "authors": "Nishikura Kazuko", "reference": { "type": "PubMed", "id": "20192758", "url": "https://pubmed.ncbi.nlm.nih.gov/20192758" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P78563-1", "protein_name": "Double-stranded RNA-specific editase 1", "gene_name": "ADARB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55265-1", "protein_name": "Double-stranded RNA-specific adenosine deaminase", "gene_name": "ADAR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P78563", "url": "https://www.uniprot.org/uniprotkb/P78563" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.20192758", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Adenosine deaminases acting on RNA, RNA editing, and interferon action.", "journal": "J. Interferon Cytokine Res.", "date": "2011", "authors": "George Cyril X, Gan Zhenji, Liu Yong, Samuel Charles E", "reference": { "type": "PubMed", "id": "21182352", "url": "https://pubmed.ncbi.nlm.nih.gov/21182352" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P78563-1", "protein_name": "Double-stranded RNA-specific editase 1", "gene_name": "ADARB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99MU3-1", "protein_name": "Double-stranded RNA-specific adenosine deaminase", "gene_name": "Adar", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q91ZS8-1", "protein_name": "Double-stranded RNA-specific editase 1", "gene_name": "Adarb1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P55265-1", "protein_name": "Double-stranded RNA-specific adenosine deaminase", "gene_name": "ADAR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P78563", "url": 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both antiviral and proviral.", "journal": "Virology", "date": "2011", "authors": "Samuel Charles E", "reference": { "type": "PubMed", "id": "21211811", "url": "https://pubmed.ncbi.nlm.nih.gov/21211811" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P78563-1", "protein_name": "Double-stranded RNA-specific editase 1", "gene_name": "ADARB1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P55265-1", "protein_name": "Double-stranded RNA-specific adenosine deaminase", "gene_name": "ADAR", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P78563", "url": "https://www.uniprot.org/uniprotkb/P78563" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.21211811", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": 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Cell Res.", "date": "2004", "authors": "Kwiatkowski BA, Ragoczy T, Ehly J, Schubach WH", "reference": { "type": "PubMed", "id": "15383329", "url": "https://pubmed.ncbi.nlm.nih.gov/15383329" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q7Z5K2-1", "protein_name": "Wings apart-like protein homolog", "gene_name": "WAPL", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "Q7Z5K2", "url": "https://www.uniprot.org/uniprotkb/Q7Z5K2" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15383329", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Mitotic phosphorylation of the peripheral Golgi protein Nir2 by Cdk1 provides a docking mechanism for Plk1 and affects cytokinesis completion.", "journal": "Molecular cell", "date": "2004", "authors": "Litvak V, Argov R, Dahan N, Ramachandran S, Amarilio R, Shainskaya A, Lev S", "reference": { "type": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00562-1", "protein_name": "Membrane-associated 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Loss of threonine phosphorylation; when associated with A-287; A-389 and A-794.", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 287, "end_pos": 287, "sequence_org": "T", "sequence_mut": "A", "comment": "Slightly reduced phosphorylation. Strongly reduced phosphorylation; when associated with A-794 or A-389. Loss of threonine phosphorylation; when associated with A-389; A-793 and A-1222.", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 300, "end_pos": 300, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on phosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 326, "end_pos": 326, "sequence_org": "S", "sequence_mut": "A", "comment": "No effect on phosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 382, "end_pos": 382, "sequence_org": "S", "sequence_mut": "A", "comment": "Strongly reduced phosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 389, "end_pos": 389, "sequence_org": "T", "sequence_mut": "A", "comment": "No detectable effect on phosphorylation; when associated with A-793 and A-1222. Strongly reduced phosphorylation; when associated with A-287. Loss of threonine phosphorylation; when associated with A-287; A-794 and A-1222.", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 794, "end_pos": 794, "sequence_org": "T", "sequence_mut": "A", "comment": "No detectable effect on phosphorylation; when associated with A-389 and A-1222. Strongly reduced phosphorylation; when associated with A-287. Loss of threonine phosphorylation; when associated with A-287; A-389 and A-1222.", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 896, "end_pos": 896, "sequence_org": "S", "sequence_mut": "A", "comment": "Reduced phosphorylation.", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "uniprot_canonical_ac": "O00562-1" } ], "phosphorylation": [ { "start_pos": 1223, "end_pos": 1223, "kinase_uniprot_canonical_ac": "P28482-1", "kinase_gene_name": "MAPK1", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "O00562", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "site_lbl": "Thr1223", "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 287, "end_pos": 287, "kinase_uniprot_canonical_ac": "P06493-1", "kinase_gene_name": "CDK1", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "O00562", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "site_lbl": "Thr287", "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 287, "end_pos": 287, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Thr", "comment": "Phosphothreonine; by CDK1", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "iPTMnet", "id": "O00562", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "site_lbl": "Thr287", "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 382, "end_pos": 382, "kinase_uniprot_canonical_ac": "P06493-1", "kinase_gene_name": "CDK1", "residue": "Ser", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "O00562", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "site_lbl": "Ser382", "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 382, "end_pos": 382, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine; by CDK1", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "iPTMnet", "id": "O00562", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "site_lbl": "Ser382", "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 794, "end_pos": 794, "kinase_uniprot_canonical_ac": "P28482-1", "kinase_gene_name": "MAPK1", "residue": "Thr", "comment": "", "evidence": [ { "database": "iPTMnet", "id": "O00562", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" } ], "site_lbl": "Thr794", "uniprot_canonical_ac": "O00562-1" }, { "start_pos": 896, "end_pos": 896, "kinase_uniprot_canonical_ac": "", "kinase_gene_name": "", "residue": "Ser", "comment": "Phosphoserine", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15125835", "url": "https://pubmed.ncbi.nlm.nih.gov/15125835" }, { "database": "iPTMnet", "id": "O00562", "url": "http://research.bioinformatics.udel.edu/iptmnet/entry/O00562" } ], "site_lbl": "Ser896", "uniprot_canonical_ac": "O00562-1" } ], "record_id": "pubmed.15125835", "abstract": "", "glycosylation": [], "snv": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 7 }, { "field": "total_sites", "count": 5 } ], "sort_fields": [ "start_pos", "end_pos", "kinase_uniprot_canonical_ac", "kinase_gene_name", "residue", "comment", "site_lbl", "uniprot_canonical_ac" ] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Differential regulation of endoplasmic reticulum structure through VAP-Nir protein interaction.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Amarilio R, Ramachandran S, Sabanay H, Lev S", "reference": { "type": "PubMed", "id": "15545272", "url": "https://pubmed.ncbi.nlm.nih.gov/15545272" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00562-1", "protein_name": "Membrane-associated phosphatidylinositol transfer protein 1", "gene_name": "PITPNM1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 349, "end_pos": 353, "sequence_org": "EFFDA", "sequence_mut": "ALLAG", "comment": "Loss of interaction with VAPB.", "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" }, { "database": "PubMed", "id": "15545272", "url": "https://pubmed.ncbi.nlm.nih.gov/15545272" } ], "uniprot_canonical_ac": "O00562-1" } ], "record_id": "pubmed.15545272", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Chromosomal localization, genomic organization and evolution of the genes encoding human phosphatidylinositol transfer protein membrane-associated (PITPNM) 1, 2 and 3.", "journal": "Cytogenet. Genome Res.", "date": "2005", "authors": "Ocaka L, Spalluto C, Wilson DI, Hunt DM, Halford S", "reference": { "type": "PubMed", "id": "15627748", "url": "https://pubmed.ncbi.nlm.nih.gov/15627748" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00562-1", "protein_name": "Membrane-associated phosphatidylinositol transfer protein 1", "gene_name": "PITPNM1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O00562", "url": "https://www.uniprot.org/uniprotkb/O00562" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15627748", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Maintenance of the diacylglycerol level in the Golgi apparatus by the Nir2 protein is critical for Golgi secretory function.", "journal": "Nature cell biology", "date": "2005-03", "authors": "Litvak Vladimir, Dahan Nili, Ramachandran Sreekumar, Sabanay Helena, Lev Sima", "reference": { "type": "PubMed", "id": "15723057", "url": "https://pubmed.ncbi.nlm.nih.gov/15723057" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O00562-1", "protein_name": "Membrane-associated phosphatidylinositol transfer 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