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], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Transcription factor Fli-1 impacts the expression of CXCL13 and regulates immune cell infiltration into the kidney in MRL/lpr mouse.", "journal": "Lupus science & medicine", "date": "2023-04", "authors": "Sato Shuzo, Zhang Xian K, Matsuoka Naoki, Sumichika Yuya, Saito Kenji, Yoshida Shuhei, Matsumoto Haruki, Temmoku Jumpei, Fujita Yuya, Asano Tomoyuki, Migita Kiyoshi", "reference": { "type": "PubMed", "id": "37094946", "url": "https://pubmed.ncbi.nlm.nih.gov/37094946" }, "referenced_glycans": [], 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"field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The Fli-1 proto-oncogene, involved in erythroleukemia and Ewing's sarcoma, encodes a transcriptional activator with DNA-binding specificities distinct from other Ets family members.", "journal": "Oncogene", "date": "1993", "authors": "Zhang L, Lemarchandel V, Romeo P H, Ben-David Y, Greer P, Bernstein A", "reference": { "type": "PubMed", "id": "8502483", "url": "https://pubmed.ncbi.nlm.nih.gov/8502483" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P26323-1", "protein_name": "Friend leukemia integration 1 transcription factor", "gene_name": "Fli1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P26323", "url": "https://www.uniprot.org/uniprotkb/P26323" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8502483", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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Cell Biol.", "date": "1992", "authors": "Brancolini C, Bottega S, Schneider C", "reference": { "type": "PubMed", "id": "1607387", "url": "https://pubmed.ncbi.nlm.nih.gov/1607387" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P11862-1", "protein_name": "Growth arrest-specific protein 2", "gene_name": "Gas2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P11862", "url": "https://www.uniprot.org/uniprotkb/P11862" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.1607387", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The circadian E3 ligase FBXL21 regulates myoblast differentiation and sarcomere architecture via MYOZ1 ubiquitination and NFAT signaling.", "journal": "PLoS genetics", "date": "2022-12-27", "authors": "Lim Ji Ye, Kim Eunju, Douglas Collin M, Wirianto Marvin, Han Chorong, Ono Kaori, Kim Sun Young, Ji Justin H, Tran Celia, Chen Zheng, Esser Karyn A, Yoo Seung-Hee", "reference": { "type": "PubMed", "id": "36574402", "url": "https://pubmed.ncbi.nlm.nih.gov/36574402" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BFZ4-1", "protein_name": "F-box/LRR-repeat protein 21", "gene_name": "Fbxl21", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "O70548-1", "protein_name": "Telethonin", "gene_name": "Tcap", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": 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mutation of glycyl-tRNA synthetase causes neuropathy in a Charcot-Marie-Tooth 2D mouse model.", "journal": "Neuron", "date": "2006", "authors": "Seburn KL, Nangle LA, Cox GA, Schimmel P, Burgess RW", "reference": { "type": "PubMed", "id": "16982418", "url": "https://pubmed.ncbi.nlm.nih.gov/16982418" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q9CZD3-1", "protein_name": "Glycine--tRNA ligase", "gene_name": "Gars1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q9CZD3", "url": "https://www.uniprot.org/uniprotkb/Q9CZD3" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.16982418", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Ceramide levels regulated by carnitine palmitoyltransferase 1C control dendritic spine maturation and cognition.", "journal": "The Journal of biological chemistry", "date": "2012", "authors": "Carrasco P, Sahun I, McDonald J, Ramirez S, Jacas J, Gratacos E, Sierra AY, Serra D, Herrero L, Acker-Palmer A, Hegardt FG, Dierssen M, Casals N", "reference": { "type": "PubMed", "id": "22539351", "url": "https://pubmed.ncbi.nlm.nih.gov/22539351" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q8BGD5-1", "protein_name": "Palmitoyl thioesterase CPT1C", "gene_name": "Cpt1c", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q8BGD5", "url": "https://www.uniprot.org/uniprotkb/Q8BGD5" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.22539351", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Biol. Chem.", "date": "1993", "authors": "Li K, Tamai K, Tan EM, Uitto J", "reference": { "type": "PubMed", "id": "8473327", "url": "https://pubmed.ncbi.nlm.nih.gov/8473327" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q07563-1", "protein_name": "Collagen alpha-1(XVII) chain", "gene_name": "Col17a1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q07563", "url": "https://www.uniprot.org/uniprotkb/Q07563" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8473327", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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"count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Complementary DNA sequence and chromosomal localization of xpg, the mouse counterpart of human repair gene XPG/ERCC5.", "journal": "Genomics", "date": "1995", "authors": "Harada YN, Matsuda Y, Shiomi N, Shiomi T", "reference": { "type": "PubMed", "id": "7590748", "url": "https://pubmed.ncbi.nlm.nih.gov/7590748" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35689-1", "protein_name": "DNA excision repair protein ERCC-5", "gene_name": "Ercc5", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P35689", "url": "https://www.uniprot.org/uniprotkb/P35689" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7590748", "abstract": "", "glycosylation": [], "mutagenesis": [], 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Genome", "date": "1996", "authors": "Ludwig D L, Mudgett J S, Park M S, Perez-Castro A V, MacInnes M A", "reference": { "type": "PubMed", "id": "8703115", "url": "https://pubmed.ncbi.nlm.nih.gov/8703115" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P35689-1", "protein_name": "DNA excision repair protein ERCC-5", "gene_name": "Ercc5", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P35689", "url": "https://www.uniprot.org/uniprotkb/P35689" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.8703115", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Involvement of EphA2 in the formation of the tail notochord via interaction with ephrinA1.", "journal": "Mech. Dev.", "date": "2001", "authors": "Naruse-Nakajima C, Asano M, Iwakura Y", "reference": { "type": "PubMed", "id": "11287184", "url": "https://pubmed.ncbi.nlm.nih.gov/11287184" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03145-1", "protein_name": "Ephrin type-A receptor 2", "gene_name": "Epha2", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03145", "url": "https://www.uniprot.org/uniprotkb/Q03145" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.11287184", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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Dev.", "date": "1994", "authors": "Becker N, Seitanidou T, Murphy P, Matt\u00e9i M G, Topilko P, Nieto M A, Wilkinson D G, Charnay P, Gilardi-Hebenstreit P", "reference": { "type": "PubMed", "id": "7947319", "url": "https://pubmed.ncbi.nlm.nih.gov/7947319" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "Q03145-1", "protein_name": "Ephrin type-A receptor 2", "gene_name": "Epha2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P54763-3", "protein_name": "Ephrin type-B receptor 2", "gene_name": "Ephb2", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "P54754-1", "protein_name": "Ephrin type-B receptor 3", "gene_name": "Ephb3", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "Q03145", "url": "https://www.uniprot.org/uniprotkb/Q03145" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.7947319", "abstract": 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J.", "date": "2000", "authors": "Yang Q, Kong Y, Rothermel B, Garry DJ, Bassel-Duby R, Williams RS", "reference": { "type": "PubMed", "id": "10620510", "url": "https://pubmed.ncbi.nlm.nih.gov/10620510" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42128-1", "protein_name": "Forkhead box protein K1", "gene_name": "Foxk1", "tax_name": "Mouse" }, { "uniprot_canonical_ac": "Q62141-4", "protein_name": "Paired amphipathic helix protein Sin3b", "gene_name": "Sin3b", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P42128", "url": "https://www.uniprot.org/uniprotkb/P42128" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.10620510", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ 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biology", "date": "1997", "authors": "Yang Q, Bassel-Duby R, Williams RS", "reference": { "type": "PubMed", "id": "9271401", "url": "https://pubmed.ncbi.nlm.nih.gov/9271401" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P42128-1", "protein_name": "Forkhead box protein K1", "gene_name": "Foxk1", "tax_name": "Mouse" } ], "species": [ { "name": "Mus musculus", "taxid": 10090, "evidence": [ { "database": "UniProtKB", "id": "P42128", "url": "https://www.uniprot.org/uniprotkb/P42128" } ], "common_name": "Mouse", "glygen_name": "Mouse", "reference_species": "Mus musculus [10090]" } ], "record_id": "pubmed.9271401", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", 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