[
{
"title": "Angiomodulin is a specific marker of vasculature and regulates vascular endothelial growth factor-A-dependent neoangiogenesis.",
"journal": "Circ. Res.",
"date": "2009",
"authors": "Hooper Andrea T, Shmelkov Sergey V, Gupta Sunny, Milde Till, Bambino Kathryn, Gillen Kelly, Goetz Mollie, Chavala Sai, Baljevic Muhamed, Murphy Andrew J, Valenzuela David M, Gale Nicholas W, Thurston Gavin, Yancopoulos George D, Vahdat Linda, Evans Todd, Rafii Shahin",
"reference": {
"type": "PubMed",
"id": "19542015",
"url": "https://pubmed.ncbi.nlm.nih.gov/19542015"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PIC1-1",
"protein_name": "Insulin-like growth factor-binding protein 7 precursor",
"gene_name": "igfbp7",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PIC1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PIC1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19542015",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Zebrafish GSDMEb Cleavage-Gated Pyroptosis Drives Septic Acute Kidney Injury In Vivo.",
"journal": "J. Immunol.",
"date": "2020",
"authors": "Wang Zhuang, Gu Zhaoyan, Hou Qing, Chen Weijie, Mu Di, Zhang Yuanxing, Liu Qin, Liu Zhihong, Yang Dahai",
"reference": {
"type": "PubMed",
"id": "32111733",
"url": "https://pubmed.ncbi.nlm.nih.gov/32111733"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PIC1-1",
"protein_name": "Insulin-like growth factor-binding protein 7 precursor",
"gene_name": "igfbp7",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PIC1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PIC1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32111733",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Embryonic atrazine exposure and later in life behavioral and brain transcriptomic, epigenetic, and pathological alterations in adult male zebrafish.",
"journal": "Cell Biol. Toxicol.",
"date": "2021",
"authors": "Horzmann Katharine A, Lin Li F, Taslakjian Boghos, Yuan Chongli, Freeman Jennifer L",
"reference": {
"type": "PubMed",
"id": "32737625",
"url": "https://pubmed.ncbi.nlm.nih.gov/32737625"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PIC1-1",
"protein_name": "Insulin-like growth factor-binding protein 7 precursor",
"gene_name": "igfbp7",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PIC1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PIC1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32737625",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Sexual dimorphic effects of igf1 deficiency on metabolism in zebrafish.",
"journal": "Front. Endocrinol.",
"date": "2022",
"authors": "Zeng Ningmei, Bao Jiankang, Shu TingTing, Shi Chuang, Zhai Gang, Jin Xia, He Jiangyan, Lou Qiyong, Yin Zhan",
"reference": {
"type": "PubMed",
"id": "35966057",
"url": "https://pubmed.ncbi.nlm.nih.gov/35966057"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PIC1-1",
"protein_name": "Insulin-like growth factor-binding protein 7 precursor",
"gene_name": "igfbp7",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NGE8-1",
"protein_name": "Insulin-like growth factor 3",
"gene_name": "igf3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PIC1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PIC1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35966057",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Identification and expression analysis of zebrafish glypicans during embryonic development.",
"journal": "PLoS ONE",
"date": "2013",
"authors": "Gupta Mansi, Brand Michael",
"reference": {
"type": "PubMed",
"id": "24244720",
"url": "https://pubmed.ncbi.nlm.nih.gov/24244720"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PID2-1",
"protein_name": "Glypican-1",
"gene_name": "gpc1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PID2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PID2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24244720",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Glypican4 modulates lateral line collective cell migration non cell-autonomously.",
"journal": "Dev. Biol.",
"date": "2016",
"authors": "Venero Galanternik Marina, Lush Mark E, Piotrowski Tatjana",
"reference": {
"type": "PubMed",
"id": "27640326",
"url": "https://pubmed.ncbi.nlm.nih.gov/27640326"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PID2-1",
"protein_name": "Glypican-1",
"gene_name": "gpc1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q8QHJ9-1",
"protein_name": "Interleukin-17 receptor D",
"gene_name": "il17rd",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PID2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PID2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27640326",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Heparan sulfate proteoglycan expression in the regenerating zebrafish fin.",
"journal": "Dev. Dyn.",
"date": "2021",
"authors": "Keil Sebastian, Gupta Mansi, Brand Michael, Knopf Franziska",
"reference": {
"type": "PubMed",
"id": "33638212",
"url": "https://pubmed.ncbi.nlm.nih.gov/33638212"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PID2-1",
"protein_name": "Glypican-1",
"gene_name": "gpc1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NAW7-1",
"protein_name": "Syndecan-4 precursor",
"gene_name": "sdc4",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PID2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PID2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.33638212",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A Dominant Heterozygous Mutation in COG4 Causes Saul-Wilson Syndrome, a Primordial Dwarfism, and Disrupts Zebrafish Development via Wnt Signaling.",
"journal": "Front. Cell Dev. Biol.",
"date": "2021",
"authors": "Xia Zhi-Jie, Zeng Xin-Xin I, Tambe Mitali, Ng Bobby G, Dong P Duc S, Freeze Hudson H",
"reference": {
"type": "PubMed",
"id": "34595172",
"url": "https://pubmed.ncbi.nlm.nih.gov/34595172"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PID2-1",
"protein_name": "Glypican-1",
"gene_name": "gpc1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PID2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PID2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34595172",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Sequence, linkage mapping and early developmental expression of the intestinal-type fatty acid-binding protein gene (fabp2) from zebrafish (Danio rerio).",
"journal": "Comp. Biochem. Physiol. B, Biochem. Mol. Biol.",
"date": "2004",
"authors": "Sharma Mukesh K, Denovan-Wright Eileen M, Degrave Agnes, Thisse Christine, Thisse Bernard, Wright Jonathan M",
"reference": {
"type": "PubMed",
"id": "15325340",
"url": "https://pubmed.ncbi.nlm.nih.gov/15325340"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PJ59-1",
"protein_name": "Alpha-2-macroglobulin receptor-associated protein precursor",
"gene_name": "lrpap1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PJ59",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PJ59"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15325340",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Molecular phenotype of zebrafish ovarian follicle by serial analysis of gene expression and proteomic profiling, and comparison with the transcriptomes of other animals.",
"journal": "BMC Genomics",
"date": "2006",
"authors": "Knoll-Gellida Anja, Andr\u00e9 Mich\u00e8le, Gattegno Tamar, Forgue Jean, Admon Arie, Babin Patrick J",
"reference": {
"type": "PubMed",
"id": "16526958",
"url": "https://pubmed.ncbi.nlm.nih.gov/16526958"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PJ59-1",
"protein_name": "Alpha-2-macroglobulin receptor-associated protein precursor",
"gene_name": "lrpap1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1Q4T4-1",
"protein_name": "HUWE1-associated protein modifying stress responses 1",
"gene_name": "hapstr1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PJ59",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PJ59"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16526958",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Lrpap1 deficiency leads to myopia through TGF-beta-induced apoptosis in zebrafish.",
"journal": "Cell Commun. Signal.",
"date": "2022",
"authors": "Liu Shanshan, Chen Ting, Chen Binghao, Liu Yijun, Lu Xiaohe, Li Jiali",
"reference": {
"type": "PubMed",
"id": "36261846",
"url": "https://pubmed.ncbi.nlm.nih.gov/36261846"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PJ59-1",
"protein_name": "Alpha-2-macroglobulin receptor-associated protein precursor",
"gene_name": "lrpap1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PJ59",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PJ59"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.36261846",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Fetal alcohol spectrum disorder predisposes to metabolic abnormalities in adulthood.",
"journal": "J. Clin. Invest.",
"date": "2020",
"authors": "Weeks Olivia, Boss\u00e9 Gabriel D, Oderberg Isaac M, Akle Sebastian, Houvras Yariv, Wrighton Paul J, LaBella Kyle, Iversen Isabelle, Tavakoli Sahar, Adatto Isaac, Schwartz Arkadi, Kloosterman Daan, Tsomides Allison, Charness Michael E, Peterson Randall T, Steinhauser Matthew L, Fazeli Pouneh K, Goessling Wolfram",
"reference": {
"type": "PubMed",
"id": "32202514",
"url": "https://pubmed.ncbi.nlm.nih.gov/32202514"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PKY8-1",
"protein_name": "Alpha-2-HS-glycoprotein 1 precursor",
"gene_name": "ahsg1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PKY8",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PKY8"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32202514",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Generation and characterization of a novel gne Knockout Model in Zebrafish.",
"journal": "Front. Cell Dev. Biol.",
"date": "2022",
"authors": "Livne Hagay, Avital Tom, Ruppo Shmuel, Harazi Avi, Mitrani-Rosenbaum Stella, Daya Alon",
"reference": {
"type": "PubMed",
"id": "36353515",
"url": "https://pubmed.ncbi.nlm.nih.gov/36353515"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PKY8-1",
"protein_name": "Alpha-2-HS-glycoprotein 1 precursor",
"gene_name": "ahsg1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N625-1",
"protein_name": "Inter-alpha-trypsin inhibitor heavy chain H3",
"gene_name": "itih3a.1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32T4X8-1",
"protein_name": "Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase",
"gene_name": "gne",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N5N8-1",
"protein_name": "Apolipoprotein A-IV",
"gene_name": "apoa4a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E7EXE9-1",
"protein_name": "2.3.2.27; E3 ubiquitin-protein ligase RBBP6 isoform 1",
"gene_name": "rbbp6",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PKY8",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PKY8"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.36353515",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Microarray-based bioinformatics analysis of the combined effects of SiNPs and PbAc on cardiovascular system in zebrafish.",
"journal": "Chemosphere",
"date": "2017",
"authors": "Hu Hejing, Zhang Yannan, Shi Yanfeng, Feng Lin, Duan Junchao, Sun Zhiwei",
"reference": {
"type": "PubMed",
"id": "28679150",
"url": "https://pubmed.ncbi.nlm.nih.gov/28679150"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PPQ4-1",
"protein_name": "NEDD4 family-interacting protein 2",
"gene_name": "ndfip2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PPQ4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PPQ4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.28679150",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Silver nanoparticles affect lens rather than retina development in zebrafish embryos.",
"journal": "Ecotoxicol. Environ. Saf.",
"date": "2018",
"authors": "Zhang YanJun, Wang ZiYang, Zhao Guang, Liu Jing-Xia",
"reference": {
"type": "PubMed",
"id": "30056342",
"url": "https://pubmed.ncbi.nlm.nih.gov/30056342"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N008-1",
"protein_name": "Crystallin, gamma M2d18",
"gene_name": "crygm2d18",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N008",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N008"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.30056342",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Dual roles for adenomatous polyposis coli in regulating retinoic acid biosynthesis and Wnt during ocular development.",
"journal": "Proc. Natl. Acad. Sci. U.S.A.",
"date": "2006",
"authors": "Nadauld Lincoln D, Chidester Stephanie, Shelton Dawne N, Rai Kunal, Broadbent Talmage, Sandoval Imelda T, Peterson Peter W, Manos Elizabeth J, Ireland Chris M, Yost H Joseph, Jones David A",
"reference": {
"type": "PubMed",
"id": "16938888",
"url": "https://pubmed.ncbi.nlm.nih.gov/16938888"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N061-1",
"protein_name": "NADP-retinol dehydrogenase",
"gene_name": "rdh12",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1QT23-1",
"protein_name": "Retinol dehydrogenase",
"gene_name": "rdh8b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N061",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N061"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16938888",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "An integrated approach with the zebrafish model for biomonitoring of municipal wastewater effluent and receiving waters.",
"journal": "Water Res.",
"date": "2018",
"authors": "Li Caixia, Chen Qiyu, Zhang Xiaoyan, Snyder Shane A, Gong Zhiyuan, Lam Siew Hong",
"reference": {
"type": "PubMed",
"id": "29258003",
"url": "https://pubmed.ncbi.nlm.nih.gov/29258003"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N061-1",
"protein_name": "NADP-retinol dehydrogenase",
"gene_name": "rdh12",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BAV5-1",
"protein_name": "BAR/IMD domain-containing adapter protein 2",
"gene_name": "baiap2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0R4IUJ2-1",
"protein_name": "Phosphoinositide-3-kinase, regulatory subunit 3a (Gamma)",
"gene_name": "pik3r3a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N061",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N061"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29258003",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Involvement of Oxidative and Endoplasmic Reticulum Stress in RDH12-Related Retinopathies.",
"journal": "Int. J. Mol. Sci.",
"date": "2021",
"authors": "Sarkar H, Toms M, Moosajee M",
"reference": {
"type": "PubMed",
"id": "34445569",
"url": "https://pubmed.ncbi.nlm.nih.gov/34445569"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N061-1",
"protein_name": "NADP-retinol dehydrogenase",
"gene_name": "rdh12",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N061",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N061"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34445569",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "RDH12 allows cone photoreceptors to regenerate opsin visual pigments from a chromophore precursor to escape competition with rods.",
"journal": "Curr. Biol.",
"date": "2024",
"authors": "Kaylor Joanna J, Frederiksen Rikard, Bedrosian Christina K, Huang Melody, Stennis-Weatherspoon David, Huynh Theodore, Ngan Tiffany, Mulamreddy Varsha, Sampath Alapakkam P, Fain Gordon L, Travis Gabriel H",
"reference": {
"type": "PubMed",
"id": "38981477",
"url": "https://pubmed.ncbi.nlm.nih.gov/38981477"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N061-1",
"protein_name": "NADP-retinol dehydrogenase",
"gene_name": "rdh12",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3S3-1",
"protein_name": "NADP-retinol dehydrogenase",
"gene_name": "rdh12l",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q96NR8-1",
"protein_name": "Retinol dehydrogenase 12",
"gene_name": "RDH12",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "A0A0R4IWU8-1",
"protein_name": "1.1.1.300; Uncharacterized protein LOC100150965",
"gene_name": "si:dkey-73n8.3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N061",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N061"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.38981477",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Embryonic Microglia Derive from Primitive Macrophages and Are Replaced by cmyb-Dependent Definitive Microglia in Zebrafish.",
"journal": "Cell Rep.",
"date": "2018",
"authors": "Ferrero Giuliano, Mahony Christopher B, Dupuis El\u00e9onore, Yvernogeau Laurent, Di Ruggiero Elodie, Miserocchi Magali, Caron Marianne, Robin Catherine, Traver David, Bertrand Julien Y, Wittamer Val\u00e9rie",
"reference": {
"type": "PubMed",
"id": "29972775",
"url": "https://pubmed.ncbi.nlm.nih.gov/29972775"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N299-1",
"protein_name": "Complement C1q subcomponent subunit C precursor",
"gene_name": "c1qc",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N299",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N299"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29972775",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Critical Role for a Subset of Intestinal Macrophages in Shaping Gut Microbiota in Adult Zebrafish.",
"journal": "Cell Rep.",
"date": "2018",
"authors": "Earley Alison M, Graves Christina L, Shiau Celia E",
"reference": {
"type": "PubMed",
"id": "30304682",
"url": "https://pubmed.ncbi.nlm.nih.gov/30304682"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N299-1",
"protein_name": "Complement C1q subcomponent subunit C precursor",
"gene_name": "c1qc",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0A0MPI6-1",
"protein_name": "Uncharacterized protein LOC570444 precursor",
"gene_name": "c1ql1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N299",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N299"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.30304682",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Comparative Transcriptome Analysis of the Regenerating Zebrafish Telencephalon Unravels a Resource With Key Pathways During Two Early Stages and Activation of Wnt/beta-Catenin Signaling at the Early Wound Healing Stage.",
"journal": "Front. Cell Dev. Biol.",
"date": "2020",
"authors": "Demirci Yeliz, Cucun Gokhan, Poyraz Yusuf Kaan, Mohammed Suhaib, Heger Guillaume, Papatheodorou Irene, Ozhan Gunes",
"reference": {
"type": "PubMed",
"id": "33163496",
"url": "https://pubmed.ncbi.nlm.nih.gov/33163496"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N299-1",
"protein_name": "Complement C1q subcomponent subunit C precursor",
"gene_name": "c1qc",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NAI0-1",
"protein_name": "Krueppel-like factor 11b",
"gene_name": "klf11b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M9PW43-1",
"protein_name": "Macrophage-capping protein",
"gene_name": "capgb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58I2W8-1",
"protein_name": "Proteoglycan 4b isoform X1",
"gene_name": "prg4b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N299",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N299"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.33163496",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Neutrophil-Associated Responses to Vibrio cholerae Infection in a Natural Host Model.",
"journal": "Infect. Immun.",
"date": "2022",
"authors": "Farr Dustin, Nag Dhrubajyoti, Chazin Walter J, Harrison Simone, Thummel Ryan, Luo Xixia, Raychaudhuri Saumya, Withey Jeffrey H",
"reference": {
"type": "PubMed",
"id": "35072520",
"url": "https://pubmed.ncbi.nlm.nih.gov/35072520"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N299-1",
"protein_name": "Complement C1q subcomponent subunit C precursor",
"gene_name": "c1qc",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB12YYE4-1",
"protein_name": "Uncharacterized protein LOC100126131 precursor",
"gene_name": "mfap4.4",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A7G2-1",
"protein_name": "CD4-2 molecule, tandem duplicate 2 precursor",
"gene_name": "cd4-2.2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A9K8-1",
"protein_name": "CD4-2 molecule, tandem duplicate 1 precursor",
"gene_name": "cd4-2.1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "D1YT98-1",
"protein_name": "T-box transcription factor TBX21",
"gene_name": "tbx21",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32TTK0-1",
"protein_name": "Forkhead box protein P3a isoform X1",
"gene_name": "foxp3a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A0A0MPI6-1",
"protein_name": "Uncharacterized protein LOC570444 precursor",
"gene_name": "c1ql1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N299",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N299"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35072520",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 7
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Pnrc2 regulates 3'UTR-mediated decay of segmentation clock-associated transcripts during zebrafish segmentation.",
"journal": "Dev. Biol.",
"date": "2017",
"authors": "Gallagher Thomas L, Tietz Kiel T, Morrow Zachary T, McCammon Jasmine M, Goldrich Michael L, Derr Nicolas L, Amacher Sharon L",
"reference": {
"type": "PubMed",
"id": "28648842",
"url": "https://pubmed.ncbi.nlm.nih.gov/28648842"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N367-1",
"protein_name": "F-box/LRR-repeat protein 4",
"gene_name": "fbxl4",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1PK58-1",
"protein_name": "RNA binding protein fox-1 homolog",
"gene_name": "rbfox2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "B7TWP7-1",
"protein_name": "Proline-rich nuclear receptor coactivator 2",
"gene_name": "pnrc2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1Q6H8-1",
"protein_name": "Axonemal dynein light intermediate polypeptide 1",
"gene_name": "dnali1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N367",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N367"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.28648842",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Dichloroacetate improves mitochondrial function, physiology, and morphology in FBXL4 disease models.",
"journal": "JCI Insight",
"date": "2022",
"authors": "Lavorato Manuela, Nakamaru-Ogiso Eiko, Mathew Neal D, Herman Elizabeth, Shah Nina, Haroon Suraiya, Xiao Rui, Seiler Christoph, Falk Marni J",
"reference": {
"type": "PubMed",
"id": "35881484",
"url": "https://pubmed.ncbi.nlm.nih.gov/35881484"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N367-1",
"protein_name": "F-box/LRR-repeat protein 4",
"gene_name": "fbxl4",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N367",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N367"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35881484",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Novel Development of Magnetic Resonance Imaging to Quantify the Structural Anatomic Growth of Diverse Organs in Adult and Mutant Zebrafish.",
"journal": "Zebrafish",
"date": "2024",
"authors": "Sharma Sonal, Magnitsky Sergey, Reesey Emily, Schwartz Mitchell, Haroon Suraiya, Lavorato Manuela, Chan Sherine, Xiao Rui, Wilkins Benjamin J, Martinez Daniel, Seiler Christoph, Falk Marni J",
"reference": {
"type": "PubMed",
"id": "37603286",
"url": "https://pubmed.ncbi.nlm.nih.gov/37603286"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N367-1",
"protein_name": "F-box/LRR-repeat protein 4",
"gene_name": "fbxl4",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N367",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N367"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37603286",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Ciliary and non-ciliary expression and function of PACRG during vertebrate development.",
"journal": "Cilia",
"date": "2012",
"authors": "Thumberger T, Hagenlocher C, Tisler M, Beyer T, Tietze N, Schweickert A, Feistel K, Blum M",
"reference": {
"type": "PubMed",
"id": "23351225",
"url": "https://pubmed.ncbi.nlm.nih.gov/23351225"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N3B8-1",
"protein_name": "Parkin coregulated gene protein",
"gene_name": "pacrg",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N3B8",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N3B8"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23351225",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Independent expansion of the keratin gene family in teleostean fish and mammals: an insight from phylogenetic analysis and radiation hybrid mapping of keratin genes in zebrafish.",
"journal": "Gene",
"date": "2006",
"authors": "Krushna Padhi Bhaja, Akimenko Marie-Andr\u00e9e, Ekker Marc",
"reference": {
"type": "PubMed",
"id": "16297574",
"url": "https://pubmed.ncbi.nlm.nih.gov/16297574"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N4Z2-1",
"protein_name": "Keratin 99",
"gene_name": "krt99",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A9X0-1",
"protein_name": "Uncharacterized protein LOC566445",
"gene_name": "si:dkey-183i3.5",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q1LXJ9-1",
"protein_name": "Keratin, type 1, 19e",
"gene_name": "krt1-19e",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1QV31-1",
"protein_name": "Keratin, type II cytoskeletal 5",
"gene_name": "krt5",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N4Z2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N4Z2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16297574",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Transcriptional profiling of endogenous germ layer precursor cells identifies dusp4 as an essential gene in zebrafish endoderm specification.",
"journal": "Proc. Natl. Acad. Sci. U.S.A.",
"date": "2008",
"authors": "Brown Jamie L, Snir Mirit, Noushmehr Houtan, Kirby Martha, Hong Sung-Kook, Elkahloun Abdel G, Feldman Benjamin",
"reference": {
"type": "PubMed",
"id": "18719100",
"url": "https://pubmed.ncbi.nlm.nih.gov/18719100"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N4Z2-1",
"protein_name": "Keratin 99",
"gene_name": "krt99",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1R5X7-1",
"protein_name": "Dehydrogenase/reductase SDR family member 11",
"gene_name": "dhrs11b.1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N4Z2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N4Z2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.18719100",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Tissue-Specific Transcriptomes Reveal Gene Expression Trajectories in Two Maturing Skin Epithelial Layers in Zebrafish Embryos.",
"journal": "G3 (Bethesda)",
"date": "2019",
"authors": "Cokus Shawn J, De La Torre Maricruz, Medina Eric F, Rasmussen Jeffrey P, Ramirez-Gutierrez Joselyn, Sagasti Alvaro, Wang Fang",
"reference": {
"type": "PubMed",
"id": "31431477",
"url": "https://pubmed.ncbi.nlm.nih.gov/31431477"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N4Z2-1",
"protein_name": "Keratin 99",
"gene_name": "krt99",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A9X0-1",
"protein_name": "Uncharacterized protein LOC566445",
"gene_name": "si:dkey-183i3.5",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N5Q5-1",
"protein_name": "Keratin 92",
"gene_name": "krt92",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "X1WD76-1",
"protein_name": "ferroxidase",
"gene_name": "hephl1a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A2BFS9-1",
"protein_name": "Transcobalamin beta b precursor",
"gene_name": "tcnbb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N7TEZ1-1",
"protein_name": "Uncharacterized protein LOC553479",
"gene_name": "krt18a.2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NXG3-1",
"protein_name": "Keratin 96",
"gene_name": "krt96",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N4Z2",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N4Z2"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31431477",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 7
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "C1q/TNF-related protein 4 (CTRP4) is a unique secreted protein with two tandem C1q domains that functions in the hypothalamus to modulate food intake and body weight.",
"journal": "J. Biol. Chem.",
"date": "2014",
"authors": "Byerly MS, Petersen PS, Ramamurthy S, Seldin MM, Lei X, Provost E, Wei Z, Ronnett GV, Wong GW",
"reference": {
"type": "PubMed",
"id": "24366864",
"url": "https://pubmed.ncbi.nlm.nih.gov/24366864"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N540-1",
"protein_name": "Complement C1q tumor necrosis factor-related protein 4",
"gene_name": "c1qtnf4",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q9BXJ3-1",
"protein_name": "Complement C1q tumor necrosis factor-related protein 4",
"gene_name": "C1QTNF4",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "Q8R066-1",
"protein_name": "Complement C1q tumor necrosis factor-related protein 4",
"gene_name": "C1qtnf4",
"tax_name": "Mouse"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N540",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N540"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24366864",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Dual-Specificity Phosphatase 14 Regulates Zebrafish Hair Cell Formation Through Activation of p38 Signaling Pathway.",
"journal": "Front. Cell. Neurosci.",
"date": "2022",
"authors": "Wei Guanyun, Zhang Xu, Cai Chengyun, Sheng Jiajing, Xu Mengting, Wang Cheng, Gu Qiuxiang, Guo Chao, Chen Fangyi, Liu Dong, Qian Fuping",
"reference": {
"type": "PubMed",
"id": "35401113",
"url": "https://pubmed.ncbi.nlm.nih.gov/35401113"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N563-1",
"protein_name": "F-box only protein 16",
"gene_name": "fbxo16",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1QSA4-1",
"protein_name": "Myelin-associated glycoprotein isoform 1 precursor; Myelin-associated glycoprotein isoform X1",
"gene_name": "mag",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N563",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N563"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35401113",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Characterization of the Z lineage Major histocompatability complex class I genes in zebrafish.",
"journal": "Immunogenetics",
"date": "2014",
"authors": "Dirscherl Hayley, Yoder Jeffrey A",
"reference": {
"type": "PubMed",
"id": "24287892",
"url": "https://pubmed.ncbi.nlm.nih.gov/24287892"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N5I1-1",
"protein_name": "Major histocompatibility complex class I LAA",
"gene_name": "mhc1laa",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58HZ21-1",
"protein_name": "Major histocompatibility complex class I UKA isoform X1",
"gene_name": "mhc1uka",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N5I1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N5I1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24287892",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Multiple divergent haplotypes express completely distinct sets of class I MHC genes in zebrafish.",
"journal": "Immunogenetics",
"date": "2014",
"authors": "McConnell Sean C, Restaino Anthony C, de Jong Jill L O",
"reference": {
"type": "PubMed",
"id": "24291825",
"url": "https://pubmed.ncbi.nlm.nih.gov/24291825"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N5I1-1",
"protein_name": "Major histocompatibility complex class I LAA",
"gene_name": "mhc1laa",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q1LUU5-1",
"protein_name": "Zinc finger and BTB domain-containing protein 22b",
"gene_name": "zbtb22b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58HZ21-1",
"protein_name": "Major histocompatibility complex class I UKA isoform X1",
"gene_name": "mhc1uka",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N5I1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N5I1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24291825",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Characterization of novel zebrafish MHC class I U lineage genes and their haplotype.",
"journal": "Dev. Comp. Immunol.",
"date": "2021",
"authors": "Honjo Yasuko, Takano Kosuke, Ichinohe Tatsuo",
"reference": {
"type": "PubMed",
"id": "33279476",
"url": "https://pubmed.ncbi.nlm.nih.gov/33279476"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N5I1-1",
"protein_name": "Major histocompatibility complex class I LAA",
"gene_name": "mhc1laa",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q1LUU5-1",
"protein_name": "Zinc finger and BTB domain-containing protein 22b",
"gene_name": "zbtb22b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58HYH8-1",
"protein_name": "Death domain-associated protein 6",
"gene_name": "daxx",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1RAH2-1",
"protein_name": "Major histocompatibility complex class I LGA precursor",
"gene_name": "mhc1lga",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1RAH3-1",
"protein_name": "Major histocompatibility complex class I LDA precursor",
"gene_name": "mhc1lda",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N5I1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N5I1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.33279476",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A proteome map of the zebrafish (Danio rerio) lens reveals similarities between zebrafish and mammalian crystallin expression.",
"journal": "Mol. Vis.",
"date": "2008",
"authors": "Posner Mason, Hawke Molly, Lacava Carrie, Prince Courtney J, Bellanco Nicholas R, Corbin Rebecca W",
"reference": {
"type": "PubMed",
"id": "18449354",
"url": "https://pubmed.ncbi.nlm.nih.gov/18449354"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N5I8-1",
"protein_name": "Crystallin, beta A1, like 1",
"gene_name": "cryba1l1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N9H1-1",
"protein_name": "Crystallin, gamma M2d2",
"gene_name": "crygm2d2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "B0S6M3-1",
"protein_name": "Crystallin, gamma M2d1",
"gene_name": "crygm2d1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E9QE97-1",
"protein_name": "Crystallin, gamma S1 isoform 1",
"gene_name": "crygs1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N5I8",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N5I8"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.18449354",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Regionalized Protein Localization Domains in the Zebrafish Hair Cell Kinocilium.",
"journal": "J. Dev. Biol.",
"date": "2023",
"authors": "Erickson Timothy, Biggers William Paul, Williams Kevin, Butland Shyanne E, Venuto Alexandra",
"reference": {
"type": "PubMed",
"id": "37367482",
"url": "https://pubmed.ncbi.nlm.nih.gov/37367482"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N5J5-1",
"protein_name": "Outer dense fiber protein 3-like protein 2a",
"gene_name": "odf3l2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N8B9-1",
"protein_name": "Stabilizer of axonemal microtubules 2",
"gene_name": "saxo2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N5J5",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N5J5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37367482",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The Polycomb Orthologues in Teleost Fishes and Their Expression in the Zebrafish Model.",
"journal": "Genes (Basel)",
"date": "2020",
"authors": "Raby Ludivine, V\u00f6lkel Pamela, Le Bourhis Xuefen, Angrand Pierre-Olivier",
"reference": {
"type": "PubMed",
"id": "32230868",
"url": "https://pubmed.ncbi.nlm.nih.gov/32230868"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N5K1-1",
"protein_name": "Chromobox homolog 7a",
"gene_name": "cbx7a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "X1WBY5-1",
"protein_name": "Chromobox protein homolog 6",
"gene_name": "cbx6b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N7UZW1-1",
"protein_name": "Chromobox protein homolog 2",
"gene_name": "cbx2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N5K1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N5K1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32230868",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Differential Requirement of <i>Gata2a</i> and <i>Gata2b</i> for Primitive and Definitive Myeloid Development in Zebrafish.",
"journal": "Front. Cell Dev. Biol.",
"date": "2021",
"authors": "Pe\u00f1a Oscar A, Lubin Alexandra, Rowell Jasmine, Hoade Yvette, Khokhar Noreen, Lemmik Hanna, Mahony Christopher, Dace Phoebe, Umamahesan Chianna, Payne Elspeth M",
"reference": {
"type": "PubMed",
"id": "34589480",
"url": "https://pubmed.ncbi.nlm.nih.gov/34589480"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N625-1",
"protein_name": "Inter-alpha-trypsin inhibitor heavy chain H3",
"gene_name": "itih3a.1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N878-1",
"protein_name": "Selenocysteine-specific elongation factor",
"gene_name": "eefsec",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E7F422-1",
"protein_name": "Musculoskeletal embryonic nuclear protein 1",
"gene_name": "mustn1a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32TPT3-1",
"protein_name": "Interactor of HORMAD1 protein 1 isoform X1",
"gene_name": "ccdc36",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N625",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N625"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34589480",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Expression of ventral diencephalon-enriched genes in zebrafish.",
"journal": "Dev. Dyn.",
"date": "2010",
"authors": "Li Sen, Yin Min, Liu Shuxi, Chen Yi, Yin Yanqing, Liu Tingxi, Zhou Jiawei",
"reference": {
"type": "PubMed",
"id": "21061380",
"url": "https://pubmed.ncbi.nlm.nih.gov/21061380"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N686-1",
"protein_name": "Krueppel-like factor 7",
"gene_name": "klf7a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q6NYB4-1",
"protein_name": "Putative nucleotidyltransferase MAB21L1",
"gene_name": "mab21l1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N686",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N686"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21061380",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Krupple-like factors 7 and 6a mRNA expression in adult zebrafish central nervous system.",
"journal": "Gene Expr. Patterns",
"date": "2016",
"authors": "Bhattarai Sunil, Sochacka-Marlowe Alicja, Crutchfield Gerald, Khan Ramisha, Londraville Richard, Liu Qin",
"reference": {
"type": "PubMed",
"id": "27364471",
"url": "https://pubmed.ncbi.nlm.nih.gov/27364471"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N686-1",
"protein_name": "Krueppel-like factor 7",
"gene_name": "klf7a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N686",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N686"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27364471",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Multiple variable first exons: a mechanism for cell- and tissue-specific gene regulation.",
"journal": "Genome Res.",
"date": "2004",
"authors": "Zhang T, Haws P, Wu Q",
"reference": {
"type": "PubMed",
"id": "14672974",
"url": "https://pubmed.ncbi.nlm.nih.gov/14672974"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N6K1-1",
"protein_name": "Protocadherin 1 gamma 32",
"gene_name": "pcdh1g32",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6M5-1",
"protein_name": "Protocadherin 1 gamma 26",
"gene_name": "pcdh1g26",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3F0-1",
"protein_name": "Protocadherin gamma-C3",
"gene_name": "pcdh2a39",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3M7-1",
"protein_name": "Protocadherin 2 alpha a 15",
"gene_name": "pcdh2aa15",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3N1-1",
"protein_name": "Protocadherin 2 alpha b2",
"gene_name": "pcdh2a27",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3N4-1",
"protein_name": "Protocadherin 2 alpha b 5 precursor",
"gene_name": "pcdh2ab29",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3S1-1",
"protein_name": "Protocadherin 2 alpha a 3 precursor",
"gene_name": "pcdh2aa3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3X5-1",
"protein_name": "Protocadherin 2 alpha a 1 precursor",
"gene_name": "pcdh2a8",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y1-1",
"protein_name": "Protocadherin 2 alpha b 12 precursor",
"gene_name": "pcdh2a36",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y6-1",
"protein_name": "Protocadherin 2 alpha b 9 precursor",
"gene_name": "pcdh2a33",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N488-1",
"protein_name": "Protocadherin 1 gamma c 5 precursor",
"gene_name": "pcdh1gc5",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N4C9-1",
"protein_name": "Protocadherin 1 gamma c 6 precursor",
"gene_name": "pcdh1gc6",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6A8-1",
"protein_name": "Protocadherin 1 gamma 3 precursor",
"gene_name": "pcdh1g3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6C7-1",
"protein_name": "Protocadherin 1 gamma 30 precursor",
"gene_name": "pcdh1g30",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6D6-1",
"protein_name": "Protocadherin 1 gamma b 9 precursor",
"gene_name": "pcdh1gb9",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6G0-1",
"protein_name": "Protocadherin 1 gamma 1 precursor",
"gene_name": "pcdh1g1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6I9-1",
"protein_name": "Protocadherin 1 gamma 29 precursor",
"gene_name": "pcdh1g29",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6J8-1",
"protein_name": "Protocadherin 1 gamma 18",
"gene_name": "pcdh1g18",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6P0-1",
"protein_name": "Protocadherin 1 gamma 2 precursor",
"gene_name": "pcdh1g2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6Q0-1",
"protein_name": "Protocadherin 1 gamma 11 precursor",
"gene_name": "pcdh1g11",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6Q5-1",
"protein_name": "Protocadherin 1 gamma 31 precursor",
"gene_name": "pcdh1g31",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q9QXS1-1",
"protein_name": "Plectin",
"gene_name": "Plec",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "Q62452-1",
"protein_name": "UDP-glucuronosyltransferase 1A9",
"gene_name": "Ugt1a9",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "P97402-1",
"protein_name": "N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase",
"gene_name": "Gcnt2",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "Q15149-1",
"protein_name": "Plectin",
"gene_name": "PLEC",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "Q64435-1",
"protein_name": "UDP-glucuronosyltransferase 1A6",
"gene_name": "Ugt1a6a; Ugt1a6; Ugt1a7c",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "P70691-1",
"protein_name": "UDP-glucuronosyltransferase 1-2",
"gene_name": "Ugt1a2",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "Q8N0V5-1",
"protein_name": "N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase",
"gene_name": "GCNT2",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "Q63886-1",
"protein_name": "UDP-glucuronosyltransferase 1A1",
"gene_name": "Ugt1a1",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "Q6ZQM8-1",
"protein_name": "UDP-glucuronosyltransferase 1A7",
"gene_name": "Ugt1a7",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "P22310-1",
"protein_name": "UDP-glucuronosyltransferase 1A4",
"gene_name": "UGT1A4",
"tax_name": "Human"
},
{
"uniprot_canonical_ac": "A0A8N1YYW5-1",
"protein_name": "Protocadherin 1 gamma b 2",
"gene_name": "pcdh1gb2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N7UY30-1",
"protein_name": "Protocadherin 2 alpha b 10 precursor",
"gene_name": "pcdh2a34",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N6K1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N6K1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.14672974",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 33
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Gene conversion and the evolution of protocadherin gene cluster diversity.",
"journal": "Genome Res.",
"date": "2004",
"authors": "Noonan James P, Grimwood Jane, Schmutz Jeremy, Dickson Mark, Myers Richard M",
"reference": {
"type": "PubMed",
"id": "14993203",
"url": "https://pubmed.ncbi.nlm.nih.gov/14993203"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N6K1-1",
"protein_name": "Protocadherin 1 gamma 32",
"gene_name": "pcdh1g32",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6M5-1",
"protein_name": "Protocadherin 1 gamma 26",
"gene_name": "pcdh1g26",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3F0-1",
"protein_name": "Protocadherin gamma-C3",
"gene_name": "pcdh2a39",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3M7-1",
"protein_name": "Protocadherin 2 alpha a 15",
"gene_name": "pcdh2aa15",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3N1-1",
"protein_name": "Protocadherin 2 alpha b2",
"gene_name": "pcdh2a27",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3N4-1",
"protein_name": "Protocadherin 2 alpha b 5 precursor",
"gene_name": "pcdh2ab29",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3S1-1",
"protein_name": "Protocadherin 2 alpha a 3 precursor",
"gene_name": "pcdh2aa3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3X5-1",
"protein_name": "Protocadherin 2 alpha a 1 precursor",
"gene_name": "pcdh2a8",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y1-1",
"protein_name": "Protocadherin 2 alpha b 12 precursor",
"gene_name": "pcdh2a36",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y6-1",
"protein_name": "Protocadherin 2 alpha b 9 precursor",
"gene_name": "pcdh2a33",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N488-1",
"protein_name": "Protocadherin 1 gamma c 5 precursor",
"gene_name": "pcdh1gc5",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N4C9-1",
"protein_name": "Protocadherin 1 gamma c 6 precursor",
"gene_name": "pcdh1gc6",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6A8-1",
"protein_name": "Protocadherin 1 gamma 3 precursor",
"gene_name": "pcdh1g3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6C7-1",
"protein_name": "Protocadherin 1 gamma 30 precursor",
"gene_name": "pcdh1g30",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6D6-1",
"protein_name": "Protocadherin 1 gamma b 9 precursor",
"gene_name": "pcdh1gb9",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6G0-1",
"protein_name": "Protocadherin 1 gamma 1 precursor",
"gene_name": "pcdh1g1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6I9-1",
"protein_name": "Protocadherin 1 gamma 29 precursor",
"gene_name": "pcdh1g29",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6J8-1",
"protein_name": "Protocadherin 1 gamma 18",
"gene_name": "pcdh1g18",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6P0-1",
"protein_name": "Protocadherin 1 gamma 2 precursor",
"gene_name": "pcdh1g2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6Q0-1",
"protein_name": "Protocadherin 1 gamma 11 precursor",
"gene_name": "pcdh1g11",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6Q5-1",
"protein_name": "Protocadherin 1 gamma 31 precursor",
"gene_name": "pcdh1g31",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N1YYW5-1",
"protein_name": "Protocadherin 1 gamma b 2",
"gene_name": "pcdh1gb2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N7UY30-1",
"protein_name": "Protocadherin 2 alpha b 10 precursor",
"gene_name": "pcdh2a34",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N6K1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N6K1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.14993203",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 23
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Genomic organization and transcripts of the zebrafish Protocadherin genes.",
"journal": "Gene",
"date": "2004",
"authors": "Tada Motoki N, Senzaki Kouji, Tai Yuumi, Morishita Hirofumi, Tanaka Yusuke Z, Murata Yoji, Ishii Yasuyuki, Asakawa Shuichi, Shimizu Nobuyoshi, Sugino Hidehiko, Yagi Takeshi",
"reference": {
"type": "PubMed",
"id": "15475161",
"url": "https://pubmed.ncbi.nlm.nih.gov/15475161"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N6K1-1",
"protein_name": "Protocadherin 1 gamma 32",
"gene_name": "pcdh1g32",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6M5-1",
"protein_name": "Protocadherin 1 gamma 26",
"gene_name": "pcdh1g26",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3F0-1",
"protein_name": "Protocadherin gamma-C3",
"gene_name": "pcdh2a39",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3M7-1",
"protein_name": "Protocadherin 2 alpha a 15",
"gene_name": "pcdh2aa15",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3N1-1",
"protein_name": "Protocadherin 2 alpha b2",
"gene_name": "pcdh2a27",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3N4-1",
"protein_name": "Protocadherin 2 alpha b 5 precursor",
"gene_name": "pcdh2ab29",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3S1-1",
"protein_name": "Protocadherin 2 alpha a 3 precursor",
"gene_name": "pcdh2aa3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3X5-1",
"protein_name": "Protocadherin 2 alpha a 1 precursor",
"gene_name": "pcdh2a8",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y1-1",
"protein_name": "Protocadherin 2 alpha b 12 precursor",
"gene_name": "pcdh2a36",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y6-1",
"protein_name": "Protocadherin 2 alpha b 9 precursor",
"gene_name": "pcdh2a33",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N488-1",
"protein_name": "Protocadherin 1 gamma c 5 precursor",
"gene_name": "pcdh1gc5",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N4C9-1",
"protein_name": "Protocadherin 1 gamma c 6 precursor",
"gene_name": "pcdh1gc6",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6A8-1",
"protein_name": "Protocadherin 1 gamma 3 precursor",
"gene_name": "pcdh1g3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6C7-1",
"protein_name": "Protocadherin 1 gamma 30 precursor",
"gene_name": "pcdh1g30",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6D6-1",
"protein_name": "Protocadherin 1 gamma b 9 precursor",
"gene_name": "pcdh1gb9",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6G0-1",
"protein_name": "Protocadherin 1 gamma 1 precursor",
"gene_name": "pcdh1g1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6I9-1",
"protein_name": "Protocadherin 1 gamma 29 precursor",
"gene_name": "pcdh1g29",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6J8-1",
"protein_name": "Protocadherin 1 gamma 18",
"gene_name": "pcdh1g18",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6P0-1",
"protein_name": "Protocadherin 1 gamma 2 precursor",
"gene_name": "pcdh1g2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6Q0-1",
"protein_name": "Protocadherin 1 gamma 11 precursor",
"gene_name": "pcdh1g11",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6Q5-1",
"protein_name": "Protocadherin 1 gamma 31 precursor",
"gene_name": "pcdh1g31",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N1YYW5-1",
"protein_name": "Protocadherin 1 gamma b 2",
"gene_name": "pcdh1gb2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N7UY30-1",
"protein_name": "Protocadherin 2 alpha b 10 precursor",
"gene_name": "pcdh2a34",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N6K1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N6K1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15475161",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 23
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Comparative genomics and diversifying selection of the clustered vertebrate protocadherin genes.",
"journal": "Genetics",
"date": "2005",
"authors": "Wu Q",
"reference": {
"type": "PubMed",
"id": "15744052",
"url": "https://pubmed.ncbi.nlm.nih.gov/15744052"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N6K1-1",
"protein_name": "Protocadherin 1 gamma 32",
"gene_name": "pcdh1g32",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6M5-1",
"protein_name": "Protocadherin 1 gamma 26",
"gene_name": "pcdh1g26",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3F0-1",
"protein_name": "Protocadherin gamma-C3",
"gene_name": "pcdh2a39",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3M7-1",
"protein_name": "Protocadherin 2 alpha a 15",
"gene_name": "pcdh2aa15",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3N1-1",
"protein_name": "Protocadherin 2 alpha b2",
"gene_name": "pcdh2a27",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3N4-1",
"protein_name": "Protocadherin 2 alpha b 5 precursor",
"gene_name": "pcdh2ab29",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3S1-1",
"protein_name": "Protocadherin 2 alpha a 3 precursor",
"gene_name": "pcdh2aa3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3X5-1",
"protein_name": "Protocadherin 2 alpha a 1 precursor",
"gene_name": "pcdh2a8",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y1-1",
"protein_name": "Protocadherin 2 alpha b 12 precursor",
"gene_name": "pcdh2a36",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y6-1",
"protein_name": "Protocadherin 2 alpha b 9 precursor",
"gene_name": "pcdh2a33",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N488-1",
"protein_name": "Protocadherin 1 gamma c 5 precursor",
"gene_name": "pcdh1gc5",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N4C9-1",
"protein_name": "Protocadherin 1 gamma c 6 precursor",
"gene_name": "pcdh1gc6",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6A8-1",
"protein_name": "Protocadherin 1 gamma 3 precursor",
"gene_name": "pcdh1g3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6C7-1",
"protein_name": "Protocadherin 1 gamma 30 precursor",
"gene_name": "pcdh1g30",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6D6-1",
"protein_name": "Protocadherin 1 gamma b 9 precursor",
"gene_name": "pcdh1gb9",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6G0-1",
"protein_name": "Protocadherin 1 gamma 1 precursor",
"gene_name": "pcdh1g1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6I9-1",
"protein_name": "Protocadherin 1 gamma 29 precursor",
"gene_name": "pcdh1g29",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6J8-1",
"protein_name": "Protocadherin 1 gamma 18",
"gene_name": "pcdh1g18",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6P0-1",
"protein_name": "Protocadherin 1 gamma 2 precursor",
"gene_name": "pcdh1g2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6Q0-1",
"protein_name": "Protocadherin 1 gamma 11 precursor",
"gene_name": "pcdh1g11",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6Q5-1",
"protein_name": "Protocadherin 1 gamma 31 precursor",
"gene_name": "pcdh1g31",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N1YYW5-1",
"protein_name": "Protocadherin 1 gamma b 2",
"gene_name": "pcdh1gb2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N7UY30-1",
"protein_name": "Protocadherin 2 alpha b 10 precursor",
"gene_name": "pcdh2a34",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N6K1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N6K1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.15744052",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 23
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Regulation of protocadherin gene expression by multiple neuron-restrictive silencer elements scattered in the gene cluster.",
"journal": "Nucleic Acids Res.",
"date": "2010",
"authors": "Tan Yuen-Peng, Li Shaobing, Jiang Xiao-Juan, Loh Wailin, Foo Yik Khon, Loh Chay-Boon, Xu Qiurong, Yuen Wai-Hong, Jones Michael, Fu Jianlin, Venkatesh Byrappa, Yu Wei-Ping",
"reference": {
"type": "PubMed",
"id": "20385576",
"url": "https://pubmed.ncbi.nlm.nih.gov/20385576"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N6M5-1",
"protein_name": "Protocadherin 1 gamma 26",
"gene_name": "pcdh1g26",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3N4-1",
"protein_name": "Protocadherin 2 alpha b 5 precursor",
"gene_name": "pcdh2ab29",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y1-1",
"protein_name": "Protocadherin 2 alpha b 12 precursor",
"gene_name": "pcdh2a36",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N3Y6-1",
"protein_name": "Protocadherin 2 alpha b 9 precursor",
"gene_name": "pcdh2a33",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6G0-1",
"protein_name": "Protocadherin 1 gamma 1 precursor",
"gene_name": "pcdh1g1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6P0-1",
"protein_name": "Protocadherin 1 gamma 2 precursor",
"gene_name": "pcdh1g2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N6Q5-1",
"protein_name": "Protocadherin 1 gamma 31 precursor",
"gene_name": "pcdh1g31",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N7UY30-1",
"protein_name": "Protocadherin 2 alpha b 10 precursor",
"gene_name": "pcdh2a34",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N6M5",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N6M5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.20385576",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 8
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Spatiotemporal expression of the dermatopontin gene in zebrafish Danio rerio.",
"journal": "Gene",
"date": "2013",
"authors": "Tan Yongkai, Iimura Kurin, Sato Tetsuro, Ura Kazuhiro, Takagi Yasuaki",
"reference": {
"type": "PubMed",
"id": "23266816",
"url": "https://pubmed.ncbi.nlm.nih.gov/23266816"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N7G4-1",
"protein_name": "Dermatopontin precursor",
"gene_name": "dpt",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8N7UZE3-1",
"protein_name": "Nucleoside diphosphate kinase 7",
"gene_name": "nme7",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N7G4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N7G4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23266816",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The Pu.1 target gene Zbtb11 regulates neutrophil development through its integrase-like HHCC zinc finger.",
"journal": "Nat. Commun.",
"date": "2017",
"authors": "Keightley Maria-Cristina, Carradice Duncan P, Layton Judith E, Pase Luke, Bertrand Julien Y, Wittig Johannes G, Dakic Aleksandar, Badrock Andrew P, Cole Nicholas J, Traver David, Nutt Stephen L, McCoey Julia, Buckle Ashley M, Heath Joan K, Lieschke Graham J",
"reference": {
"type": "PubMed",
"id": "28382966",
"url": "https://pubmed.ncbi.nlm.nih.gov/28382966"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N7G4-1",
"protein_name": "Dermatopontin precursor",
"gene_name": "dpt",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1RAC1-1",
"protein_name": "Zinc finger and BTB domain-containing protein 11",
"gene_name": "zbtb11",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N7G4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N7G4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.28382966",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "An irradiated marrow niche reveals a small noncollagenous protein mediator of homing, dermatopontin.",
"journal": "Blood Adv.",
"date": "2021",
"authors": "Kramer Ashley C, Astuti Yuliana, Elfstrum Alexis, Lehrke Michael J, Tolar Jakub, Blazar Bruce R, Blake Amanda L, Taisto Mandy E, Furcich Justin W, Nolan Erin E, Durose Wilaiwan W, Webber Beau R, Geisness Athena, Wood David K, Lund Troy C",
"reference": {
"type": "PubMed",
"id": "34448828",
"url": "https://pubmed.ncbi.nlm.nih.gov/34448828"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N7G4-1",
"protein_name": "Dermatopontin precursor",
"gene_name": "dpt",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N7G4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N7G4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34448828",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "An Integrative Developmental Genomics and Systems Biology Approach to Identify an In Vivo Sox Trio-Mediated Gene Regulatory Network in Murine Embryos.",
"journal": "Biomed Res Int",
"date": "2017",
"authors": "Lee Wenqing Jean, Chatterjee Sumantra, Yap Sook Peng, Lim Siew Lan, Xing Xing, Kraus Petra, Sun Wenjie, Hu Xiaoming, Sivakamasundari V, Chan Hsiao Yun, Kolatkar Prasanna R, Prabhakar Shyam, Lufkin Thomas",
"reference": {
"type": "PubMed",
"id": "28630873",
"url": "https://pubmed.ncbi.nlm.nih.gov/28630873"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N7G6-1",
"protein_name": "F-box/LRR-repeat protein 18",
"gene_name": "fbxl18",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N7G6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N7G6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.28630873",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Reprogramming histone modification patterns to coordinate gene expression in early zebrafish embryos.",
"journal": "BMC Genomics",
"date": "2019",
"authors": "Zhu Wei, Xu Xiaocui, Wang Xinxin, Liu Jiang",
"reference": {
"type": "PubMed",
"id": "30922236",
"url": "https://pubmed.ncbi.nlm.nih.gov/30922236"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N7G6-1",
"protein_name": "F-box/LRR-repeat protein 18",
"gene_name": "fbxl18",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N7G6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N7G6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.30922236",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "zmiz1a zebrafish mutants have defective erythropoiesis, altered expression of autophagy genes, and a deficient response to vitamin D.",
"journal": "Life Sci.",
"date": "2021",
"authors": "Castillo-Castellanos Francisco, Ram\u00edrez Laura, Lomel\u00ed Hilda",
"reference": {
"type": "PubMed",
"id": "34453946",
"url": "https://pubmed.ncbi.nlm.nih.gov/34453946"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N7Q3-1",
"protein_name": "Protein FAM210B, mitochondrial",
"gene_name": "mims2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A890-1",
"protein_name": "Gamma-aminobutyric acid receptor-associated protein",
"gene_name": "gabarapb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q5RGT2-1",
"protein_name": "Choline/ethanolamine transporter FLVCR1",
"gene_name": "flvcr1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1QZM4-1",
"protein_name": "BCL2 interacting protein 4",
"gene_name": "bnip4",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N7Q3",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N7Q3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34453946",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 4
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Mitochondrial Dysfunction, Disruption of F-Actin Polymerization, and Transcriptomic Alterations in Zebrafish Larvae Exposed to Trichloroethylene.",
"journal": "Chem. Res. Toxicol.",
"date": "2016",
"authors": "Wirbisky Sara E, Damayanti Nur P, Mahapatra Cecon T, Sep\u00falveda Maria S, Irudayaraj Joseph, Freeman Jennifer L",
"reference": {
"type": "PubMed",
"id": "26745549",
"url": "https://pubmed.ncbi.nlm.nih.gov/26745549"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N801-1",
"protein_name": "phospholipase A2",
"gene_name": "pla2g3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "B0V1Q6-1",
"protein_name": "Transcription factor JunD",
"gene_name": "jund",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1RQY7-1",
"protein_name": "KN motif and ankyrin repeat domain-containing protein 1a",
"gene_name": "kank1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N801",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N801"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.26745549",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Tissue-specific transcriptional regulation of monocarboxylate transporters (MCTs) during short-term hypoxia in zebrafish (Danio rerio).",
"journal": "Comp. Biochem. Physiol. B, Biochem. Mol. Biol.",
"date": "2009",
"authors": "Ngan Adam K, Wang Yuxiang S",
"reference": {
"type": "PubMed",
"id": "19709642",
"url": "https://pubmed.ncbi.nlm.nih.gov/19709642"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N837-1",
"protein_name": "Monocarboxylate transporter 2",
"gene_name": "slc16a7",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N837",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N837"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19709642",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cellular visualization of macrophage pyroptosis and interleukin-1beta release in a viral hemorrhagic infection in zebrafish larvae.",
"journal": "J. Virol.",
"date": "2014",
"authors": "Varela M\u00f3nica, Romero Alejandro, Dios Sonia, van der Vaart Michiel, Figueras Antonio, Meijer Annemarie H, Novoa Beatriz",
"reference": {
"type": "PubMed",
"id": "25100833",
"url": "https://pubmed.ncbi.nlm.nih.gov/25100833"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N857-1",
"protein_name": "Interferon-induced protein with tetratricopeptide repeats 8",
"gene_name": "ifit8",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N857",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N857"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25100833",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The Ahr2-Dependent wfikkn1 Gene Influences Zebrafish Transcriptome, Proteome, and Behavior.",
"journal": "Toxicol. Sci.",
"date": "2022",
"authors": "Shankar Prarthana, Garcia Gloria R, La Du Jane K, Sullivan Christopher M, Dunham Cheryl L, Goodale Britton C, Waters Katrina M, Stanisheuski Stanislau, Maier Claudia S, Thunga Preethi, Reif David M, Tanguay Robyn L",
"reference": {
"type": "PubMed",
"id": "35377459",
"url": "https://pubmed.ncbi.nlm.nih.gov/35377459"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N857-1",
"protein_name": "Interferon-induced protein with tetratricopeptide repeats 8",
"gene_name": "ifit8",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A7C6-1",
"protein_name": "FSD1-like protein",
"gene_name": "fsd1l",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "X1WEE1-1",
"protein_name": "Transporter",
"gene_name": "slc6a17",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BA52-1",
"protein_name": "Pentraxin family member",
"gene_name": "crp2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A5PMY1-1",
"protein_name": "Regulating synaptic membrane exocytosis protein 3 isoform X1",
"gene_name": "rims3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N857",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N857"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35377459",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Zebrafish complement factor H and its related genes: identification, evolution, and expression.",
"journal": "Funct. Integr. Genomics",
"date": "2010",
"authors": "Sun Guanni, Li Hongyan, Wang Yuan, Zhang Baohong, Zhang Shicui",
"reference": {
"type": "PubMed",
"id": "20668901",
"url": "https://pubmed.ncbi.nlm.nih.gov/20668901"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N898-1",
"protein_name": "Complement factor H like 1 precursor",
"gene_name": "cfhl1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N898",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N898"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.20668901",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Regulator of complement activation (RCA) group 2 gene cluster in zebrafish: identification, expression, and evolution.",
"journal": "Funct. Integr. Genomics",
"date": "2012",
"authors": "Wu Jie, Li Hongyan, Zhang Shicui",
"reference": {
"type": "PubMed",
"id": "22252228",
"url": "https://pubmed.ncbi.nlm.nih.gov/22252228"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N898-1",
"protein_name": "Complement factor H like 1 precursor",
"gene_name": "cfhl1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N898",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N898"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.22252228",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "CFTR deficiency causes cardiac dysplasia during zebrafish embryogenesis and is associated with dilated cardiomyopathy.",
"journal": "Mech. Dev.",
"date": "2020",
"authors": "Liu Yanyan, Lin Ziyuan, Liu Mingfeng, Liao Huijuan, Chen Yan, Zhang Xiaohu, Chan Hsiao Chang, Zhou Bin, Rao Li, Sun Huaqin",
"reference": {
"type": "PubMed",
"id": "32574800",
"url": "https://pubmed.ncbi.nlm.nih.gov/32574800"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N8A9-1",
"protein_name": "Uncharacterized protein LOC641487",
"gene_name": "zgc:123060",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB40E7N5-1",
"protein_name": "Voltage-dependent calcium channel subunit alpha-2/delta-2a precursor",
"gene_name": "cacna2d2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N8A9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N8A9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32574800",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Endocannabinoid Receptor Expression in Early Zebrafish Development.",
"journal": "Dev. Neurosci.",
"date": "2022",
"authors": "Son Hae-Won, Ali Declan William",
"reference": {
"type": "PubMed",
"id": "35168237",
"url": "https://pubmed.ncbi.nlm.nih.gov/35168237"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N8I4-1",
"protein_name": "G-protein coupled receptor 55a",
"gene_name": "gpr55a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N8I4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N8I4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35168237",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Genome-Wide Identification of Hsp70 Genes in the Large Yellow Croaker (Larimichthys crocea) and Their Regulated Expression Under Cold and Heat Stress.",
"journal": "Genes (Basel)",
"date": "2018",
"authors": "Xu Kaida, Xu Hanxiang, Han Zhiqiang",
"reference": {
"type": "PubMed",
"id": "30501106",
"url": "https://pubmed.ncbi.nlm.nih.gov/30501106"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N9R3-1",
"protein_name": "Heat shock protein family A (Hsp70) member 12A.3",
"gene_name": "hspa12a.1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NE33-1",
"protein_name": "Heat shock cognate 71 kDa protein",
"gene_name": "hspa1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1R9V3-1",
"protein_name": "Heat shock cognate 71 kDa protein",
"gene_name": "hspa8b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N9R3",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N9R3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.30501106",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Loss of flrt2 gene leads to microphthalmia in zebrafish.",
"journal": "Biol. Open",
"date": "2023",
"authors": "Yang Siyu, Huang Lianggui, Liang Huiling, Guo Jingyi, Liu Liyue, Chen Shuyi, Cao Mingzhe",
"reference": {
"type": "PubMed",
"id": "37259881",
"url": "https://pubmed.ncbi.nlm.nih.gov/37259881"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "X1WEV4-1",
"protein_name": "Leucine-rich repeat transmembrane protein FLRT2",
"gene_name": "flrt2; si:dkey-87k14.1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "X1WEV4",
"url": "https://www.uniprot.org/uniprotkb/X1WEV4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37259881",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Exploration of Stereoselectivity in Embryo-Larvae (Danio rerio) Induced by Chiral PCB149 at the Bioconcentration and Gene Expression Levels.",
"journal": "PLoS ONE",
"date": "2016",
"authors": "Chai Tingting, Cui Feng, Mu Xiyan, Yang Yang, Wang Chengju, Qiu Jing",
"reference": {
"type": "PubMed",
"id": "27158819",
"url": "https://pubmed.ncbi.nlm.nih.gov/27158819"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N004-1",
"protein_name": "Cytochrome P450 2AA4",
"gene_name": "cyp2aa4",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N004",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N004"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27158819",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cohesin facilitates zygotic genome activation in zebrafish.",
"journal": "Development",
"date": "2018",
"authors": "Meier Michael, Grant Jenny, Dowdle Amy, Thomas Amarni, Gerton Jennifer, Collas Philippe, O'Sullivan Justin M, Horsfield Julia A",
"reference": {
"type": "PubMed",
"id": "29158440",
"url": "https://pubmed.ncbi.nlm.nih.gov/29158440"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1N004-1",
"protein_name": "Cytochrome P450 2AA4",
"gene_name": "cyp2aa4",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1N004",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1N004"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29158440",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A zebrafish cell culture assay for the identification of microRNA targets.",
"journal": "Zebrafish",
"date": "2010",
"authors": "Liu Weiyi, Guan Yihong, Collodi Paul",
"reference": {
"type": "PubMed",
"id": "21158564",
"url": "https://pubmed.ncbi.nlm.nih.gov/21158564"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "X1WG39-1",
"protein_name": "Protein argonaute-1",
"gene_name": "ago1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "X1WG39",
"url": "https://www.uniprot.org/uniprotkb/X1WG39"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21158564",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A Nuclear Role for miR-9 and Argonaute Proteins in Balancing Quiescent and Activated Neural Stem Cell States.",
"journal": "Cell Rep.",
"date": "2016",
"authors": "Katz Shauna, Cussigh Delphine, Urb\u00e1n Noelia, Blomfield Isabelle, Guillemot Fran\u00e7ois, Bally-Cuif Laure, Coolen Marion",
"reference": {
"type": "PubMed",
"id": "27783951",
"url": "https://pubmed.ncbi.nlm.nih.gov/27783951"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "X1WG39-1",
"protein_name": "Protein argonaute-1",
"gene_name": "ago1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "X1WG39",
"url": "https://www.uniprot.org/uniprotkb/X1WG39"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27783951",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A Germline-Specific Regulator of Mitochondrial Fusion is Required for Maintenance and Differentiation of Germline Stem and Progenitor Cells.",
"journal": "Adv. Sci.",
"date": "2022",
"authors": "Zhang Ru, Tu Yi-Xuan, Ye Ding, Gu Zhenglong, Chen Zhen-Xia, Sun Yonghua",
"reference": {
"type": "PubMed",
"id": "36257818",
"url": "https://pubmed.ncbi.nlm.nih.gov/36257818"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0AB13AAM9-1",
"protein_name": "Chromatin target of PRMT1b isoform 2",
"gene_name": "chtopb",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E7F9G1-1",
"protein_name": "MAD2L1-binding protein",
"gene_name": "mad2l1bp",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N7Z7-1",
"protein_name": "Septin 4a",
"gene_name": "septin4a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1QSM3-1",
"protein_name": "Cytochrome P450 2X7",
"gene_name": "cyp2x7",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1RP53-1",
"protein_name": "Gonadal somatic cell derived factor isoform X1",
"gene_name": "gsdf",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0AB13AAM9",
"url": "https://www.uniprot.org/uniprotkb/A0AB13AAM9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.36257818",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 5
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Expression patterns of pcbp gene family members during zebrafish embryogenesis.",
"journal": "Gene Expr. Patterns",
"date": "2020",
"authors": "Wang Jie, Guo Xiaoling, Wang Dongxian, Yang Shulan",
"reference": {
"type": "PubMed",
"id": "32007595",
"url": "https://pubmed.ncbi.nlm.nih.gov/32007595"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8N1TXT5-1",
"protein_name": "Poly(RC)-binding protein 4",
"gene_name": "pcbp4",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M9Q4K7-1",
"protein_name": "Poly(RC)-binding protein 3 isoform X1",
"gene_name": "pcbp3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8N1TXT5",
"url": "https://www.uniprot.org/uniprotkb/A0A8N1TXT5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32007595",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Combined exposure to nanoplastics and metal oxide nanoparticles inhibits efflux pumps and causes oxidative stress in zebrafish embryos.",
"journal": "Sci. Total Environ.",
"date": "2022",
"authors": "Bhagat Jacky, Zang Liqing, Kaneco Satoshi, Nishimura Norihiro, Shimada Yasuhito",
"reference": {
"type": "PubMed",
"id": "35461948",
"url": "https://pubmed.ncbi.nlm.nih.gov/35461948"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0AB13A3Z0-1",
"protein_name": "DNA repair protein XRCC2 isoform 1",
"gene_name": "xrcc2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N2Y9-1",
"protein_name": "Cystic fibrosis transmembrane conductance regulator",
"gene_name": "abcc4",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58I2J2-1",
"protein_name": "DNA repair protein RAD51 homolog",
"gene_name": "rad51",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0AB13A3Z0",
"url": "https://www.uniprot.org/uniprotkb/A0AB13A3Z0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35461948",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Brain Regeneration Resembles Brain Cancer at Its Early Wound Healing Stage and Diverges From Cancer Later at Its Proliferation and Differentiation Stages.",
"journal": "Front. Cell Dev. Biol.",
"date": "2022",
"authors": "Demirci Yeliz, Heger Guillaume, Katkat Esra, Papatheodorou Irene, Brazma Alvis, Ozhan Gunes",
"reference": {
"type": "PubMed",
"id": "35223842",
"url": "https://pubmed.ncbi.nlm.nih.gov/35223842"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NAI0-1",
"protein_name": "Krueppel-like factor 11b",
"gene_name": "klf11b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M9PW43-1",
"protein_name": "Macrophage-capping protein",
"gene_name": "capgb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NAI0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NAI0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.35223842",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Adenomatous polyposis coli control of C-terminal binding protein-1 stability regulates expression of intestinal retinol dehydrogenases.",
"journal": "J. Biol. Chem.",
"date": "2006",
"authors": "Nadauld Lincoln D, Phelps Reid, Moore Brent C, Eisinger Annie, Sandoval Imelda T, Chidester Stephanie, Peterson Peter W, Manos Elizabeth J, Sklow Bradford, Burt Randall W, Jones David A",
"reference": {
"type": "PubMed",
"id": "17028196",
"url": "https://pubmed.ncbi.nlm.nih.gov/17028196"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PBY6-1",
"protein_name": "C-terminal-binding protein 1",
"gene_name": "ctbp1l",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PBY6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PBY6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.17028196",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A two-step model for colon adenoma initiation and progression caused by APC loss.",
"journal": "Cell",
"date": "2009",
"authors": "Phelps Reid A, Chidester Stephanie, Dehghanizadeh Somaye, Phelps Jason, Sandoval Imelda T, Rai Kunal, Broadbent Talmage, Sarkar Sharmistha, Burt Randall W, Jones David A",
"reference": {
"type": "PubMed",
"id": "19450512",
"url": "https://pubmed.ncbi.nlm.nih.gov/19450512"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PBY6-1",
"protein_name": "C-terminal-binding protein 1",
"gene_name": "ctbp1l",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PBY6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PBY6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19450512",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Control of endothelial sprouting by a Tel-CtBP complex.",
"journal": "Nat. Cell Biol.",
"date": "2010",
"authors": "Roukens M Guy, Alloul-Ramdhani Mariam, Baan Bart, Kobayashi Kazuki, Peterson-Maduro Josi, van Dam Hans, Schulte-Merker Stefan, Baker David A",
"reference": {
"type": "PubMed",
"id": "20835243",
"url": "https://pubmed.ncbi.nlm.nih.gov/20835243"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PBY6-1",
"protein_name": "C-terminal-binding protein 1",
"gene_name": "ctbp1l",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PBY6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PBY6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.20835243",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Characterization of Ribeye subunits in zebrafish hair cells reveals that exogenous Ribeye B-domain and CtBP1 localize to the basal ends of synaptic ribbons.",
"journal": "PLoS ONE",
"date": "2014",
"authors": "Sheets Lavinia, Hagen Matthew W, Nicolson Teresa",
"reference": {
"type": "PubMed",
"id": "25208216",
"url": "https://pubmed.ncbi.nlm.nih.gov/25208216"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1PBY6-1",
"protein_name": "C-terminal-binding protein 1",
"gene_name": "ctbp1l",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1PBY6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1PBY6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25208216",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Collagen XIXa1 is crucial for motor axon navigation at intermediate targets.",
"journal": "Development",
"date": "2010",
"authors": "Hilario Jona D, Wang Chunping, Beattie Christine E",
"reference": {
"type": "PubMed",
"id": "21098567",
"url": "https://pubmed.ncbi.nlm.nih.gov/21098567"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NA67-1",
"protein_name": "Collagen alpha-1(XVI) chain",
"gene_name": "col19a1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NA67",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NA67"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21098567",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Characterization of lncRNAs involved in cold acclimation of zebrafish ZF4 cells.",
"journal": "PLoS ONE",
"date": "2018",
"authors": "Jiang Penglei, Hou Yanwen, Fu Weikang, Tao Xiaofan, Luo Juntao, Lu Hanxu, Xu Yicheng, Han Bingshe, Zhang Junfang",
"reference": {
"type": "PubMed",
"id": "29634734",
"url": "https://pubmed.ncbi.nlm.nih.gov/29634734"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NA67-1",
"protein_name": "Collagen alpha-1(XVI) chain",
"gene_name": "col19a1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1NBG2-1",
"protein_name": "Peroxiredoxin-like 2A",
"gene_name": "selenou1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32TY29-1",
"protein_name": "Anoctamin",
"gene_name": "ano1a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NA67",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NA67"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29634734",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Interaction of Axonal Chondrolectin with Collagen XIXa1 Is Necessary for Precise Neuromuscular Junction Formation.",
"journal": "Cell Rep.",
"date": "2019",
"authors": "Oprisoreanu AM, Smith HL, Arya S, Webster R, Zhong Z, Eaton-Hart C, Wehner D, Cardozo MJ, Becker T, Talbot K, Becker CG",
"reference": {
"type": "PubMed",
"id": "31665626",
"url": "https://pubmed.ncbi.nlm.nih.gov/31665626"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NA67-1",
"protein_name": "Collagen alpha-1(XVI) chain",
"gene_name": "col19a1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q0VF58-1",
"protein_name": "Collagen alpha-1(XIX) chain",
"gene_name": "Col19a1",
"tax_name": "Mouse"
},
{
"uniprot_canonical_ac": "Q568T5-1",
"protein_name": "Chondrolectin",
"gene_name": "chodl",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NA67",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NA67"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31665626",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "GIPC proteins negatively modulate Plexind1 signaling during vascular development.",
"journal": "Elife",
"date": "2019",
"authors": "Carretero-Ortega Jorge, Chhangawala Zinal, Hunt Shane, Narvaez Carlos, Men\u00e9ndez-Gonz\u00e1lez Javier, Gay Carl M, Zygmunt Tomasz, Li Xiaochun, Torres-V\u00e1zquez Jes\u00fas",
"reference": {
"type": "PubMed",
"id": "31050647",
"url": "https://pubmed.ncbi.nlm.nih.gov/31050647"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NAF3-1",
"protein_name": "PDZ domain-containing protein GIPC3",
"gene_name": "gipc3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NAF3",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NAF3"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31050647",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Identification and expression of soul/p22HBP genes in zebrafish.",
"journal": "Gene Expr. Patterns",
"date": "2011",
"authors": "Fortunato Antonio Emidio, Langellotto Fernanda, Sordino Paolo",
"reference": {
"type": "PubMed",
"id": "21440679",
"url": "https://pubmed.ncbi.nlm.nih.gov/21440679"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NAK1-1",
"protein_name": "Heme-binding protein soul3",
"gene_name": "soul3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NAK1",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NAK1"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21440679",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Identification of maternal-effect genes in zebrafish using maternal crispants.",
"journal": "Development",
"date": "2021",
"authors": "Moravec Cara E, Voit Gabriella C, Otterlee Jarred, Pelegri Francisco",
"reference": {
"type": "PubMed",
"id": "34463742",
"url": "https://pubmed.ncbi.nlm.nih.gov/34463742"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NAL0-1",
"protein_name": "FH2 domain containing 3",
"gene_name": "fhdc3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M1N145-1",
"protein_name": "Uncharacterized protein LOC797431",
"gene_name": "prc2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NAL0",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NAL0"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34463742",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Silencing of FABP3 leads to apoptosis-induced mitochondrial dysfunction and stimulates Wnt signaling in zebrafish.",
"journal": "Mol. Med. Report.",
"date": "2013",
"authors": "Liu Yao-Qiu, Song Gui-Xian, Liu Hai-Lang, Wang Xue-Jie, Shen Ya-Hui, Zhou Li-Juan, Jin Jin, Liu Ming, Shi Chun-Mei, Qian Ling-Mei",
"reference": {
"type": "PubMed",
"id": "23846528",
"url": "https://pubmed.ncbi.nlm.nih.gov/23846528"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NAR5-1",
"protein_name": "Small ribosomal subunit protein bS1m",
"gene_name": "mrps28",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NAR5",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NAR5"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23846528",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The cell adhesion-associated protein Git2 regulates morphogenetic movements during zebrafish embryonic development.",
"journal": "Dev. Biol.",
"date": "2011",
"authors": "Yu Jianxin A, Foley Fiona C, Amack Jeffrey D, Turner Christopher E",
"reference": {
"type": "PubMed",
"id": "21034731",
"url": "https://pubmed.ncbi.nlm.nih.gov/21034731"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NBH7-1",
"protein_name": "ARF GTPase-activating protein GIT2b isoform 1",
"gene_name": "git2b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BCH9-1",
"protein_name": "ARF GTPase-activating protein GIT2a isoform X1",
"gene_name": "git2a",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NBH7",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NBH7"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21034731",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Noonan syndrome-associated biallelic LZTR1 mutations cause cardiac hypertrophy and vascular malformations in zebrafish.",
"journal": "Mol. Genet. Genomic Med.",
"date": "2020",
"authors": "Nakagama Yu, Takeda Norihiko, Ogawa Seishi, Takeda Hiroyuki, Furutani Yoshiyuki, Nakanishi Toshio, Sato Tatsuyuki, Hirata Yoichiro, Oka Akira, Inuzuka Ryo",
"reference": {
"type": "PubMed",
"id": "31883238",
"url": "https://pubmed.ncbi.nlm.nih.gov/31883238"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NBN9-1",
"protein_name": "Leucine-zipper-like transcriptional regulator 1",
"gene_name": "lztr1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NBN9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NBN9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.31883238",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Discovery of multiple beta-defensin like homologues in teleost fish.",
"journal": "Mol. Immunol.",
"date": "2007",
"authors": "Zou Jun, Mercier Claire, Koussounadis Antonis, Secombes Chris",
"reference": {
"type": "PubMed",
"id": "16540171",
"url": "https://pubmed.ncbi.nlm.nih.gov/16540171"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NBV9-1",
"protein_name": "Beta-defensin-like 2 precursor",
"gene_name": "defbl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NBV9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NBV9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.16540171",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Molecular cloning and expression analysis of two beta-defensin genes in the blunt snout bream (Megalobrama amblycephala).",
"journal": "Comp. Biochem. Physiol. B, Biochem. Mol. Biol.",
"date": "2013",
"authors": "Liang Tao, Wang Dan-Dan, Zhang Gui-Rong, Wei Kai-Jian, Wang Wei-Min, Zou Gui-Wei",
"reference": {
"type": "PubMed",
"id": "23876385",
"url": "https://pubmed.ncbi.nlm.nih.gov/23876385"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NBV9-1",
"protein_name": "Beta-defensin-like 2 precursor",
"gene_name": "defbl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NBV9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NBV9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.23876385",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Dietary Supplementation with Omega-6 LC-PUFA-Rich Microalgae Regulates Mucosal Immune Response and Promotes Microbial Diversity in the Zebrafish Gut.",
"journal": "Biology",
"date": "2020",
"authors": "Nayak Sagar, Al Ashhab Ashraf, Zilberg Dina, Khozin-Goldberg Inna",
"reference": {
"type": "PubMed",
"id": "32517017",
"url": "https://pubmed.ncbi.nlm.nih.gov/32517017"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NBV9-1",
"protein_name": "Beta-defensin-like 2 precursor",
"gene_name": "defbl2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "Q5TKT3-1",
"protein_name": "Interleukin 17a/f2 precursor",
"gene_name": "f2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NBV9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NBV9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.32517017",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "A Novel Pseudoalteromonas xiamenensis Marine Isolate as a Potential Probiotic: Anti-Inflammatory and Innate Immune Modulatory Effects against Thermal and Pathogenic Stresses.",
"journal": "Mar. Drugs",
"date": "2021",
"authors": "Wasana Withanage Prasadini, Senevirathne Amal, Nikapitiya Chamilani, Eom Tae-Yang, Lee Youngdeuk, Lee Jong-Soo, Kang Do-Hyung, Oh Chulhong, De Zoysa Mahanama",
"reference": {
"type": "PubMed",
"id": "34940706",
"url": "https://pubmed.ncbi.nlm.nih.gov/34940706"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NBV9-1",
"protein_name": "Beta-defensin-like 2 precursor",
"gene_name": "defbl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NBV9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NBV9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34940706",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Vitamin D influences gut microbiota and acetate production in zebrafish (Danio rerio) to promote intestinal immunity against invading pathogens.",
"journal": "Gut Microbes",
"date": "2023",
"authors": "Liao Xinmeng, Lan Yawen, Wang Wentao, Zhang Jinjin, Shao Rui, Yin Zhan, Gudmundsson Gudmundur H, Bergman Peter, Mai Kangsen, Ai Qinghui, Wan Min",
"reference": {
"type": "PubMed",
"id": "36879441",
"url": "https://pubmed.ncbi.nlm.nih.gov/36879441"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NBV9-1",
"protein_name": "Beta-defensin-like 2 precursor",
"gene_name": "defbl2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "B8JLG4-1",
"protein_name": "Claudin",
"gene_name": "cldn15la",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NBV9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NBV9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.36879441",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Zebrafish nos2a benefits bacterial proliferation via suppressing ROS and inducing NO production to impair the expressions of inflammatory cytokines and antibacterial genes.",
"journal": "Fish Shellfish Immunol.",
"date": "2023",
"authors": "Zheng Si Yao, Shao Xinbin, Qi Zhitao, Yan Maocang, Tao Min Hui, Wu Xiao Man, Zhang Lining, Ma Jianzhong, Li An, Chang Ming Xian",
"reference": {
"type": "PubMed",
"id": "37863126",
"url": "https://pubmed.ncbi.nlm.nih.gov/37863126"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NBV9-1",
"protein_name": "Beta-defensin-like 2 precursor",
"gene_name": "defbl2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1RBF1-1",
"protein_name": "Interleukin-20 receptor subunit alpha precursor",
"gene_name": "il20ra",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NBV9",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NBV9"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.37863126",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Excess PLAC8 promotes an unconventional ERK2-dependent EMT in colon cancer.",
"journal": "J. Clin. Invest.",
"date": "2014",
"authors": "Li Cunxi, Ma Haiting, Wang Yang, Cao Zheng, Graves-Deal Ramona, Powell Anne E, Starchenko Alina, Ayers Gregory D, Washington Mary Kay, Kamath Vidya, Desai Keyur, Gerdes Michael J, Solnica-Krezel Lila, Coffey Robert J",
"reference": {
"type": "PubMed",
"id": "24691442",
"url": "https://pubmed.ncbi.nlm.nih.gov/24691442"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NE07-1",
"protein_name": "Placenta associated 8, tandem duplicate 2",
"gene_name": "plac8.2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E7F147-1",
"protein_name": "Plac8 onzin related protein 1",
"gene_name": "ponzr1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NE07",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NE07"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24691442",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Loss of smarcad1a accelerates tumorigenesis of malignant peripheral nerve sheath tumors in zebrafish.",
"journal": "Genes Chromosomes Cancer",
"date": "2021",
"authors": "Han Han, Jiang Guangzhen, Kumari Rashmi, Silic Martin R, Owens Jake L, Hu Chang-Deng, Mittal Suresh K, Zhang GuangJun",
"reference": {
"type": "PubMed",
"id": "34296799",
"url": "https://pubmed.ncbi.nlm.nih.gov/34296799"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NE07-1",
"protein_name": "Placenta associated 8, tandem duplicate 2",
"gene_name": "plac8.2",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "B0R061-1",
"protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A",
"gene_name": "smarcad1a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "E7F1C4-1",
"protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B",
"gene_name": "smarcad1b",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NE07",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NE07"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.34296799",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 3
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Zebrafish muscleblind-like genes: identification, structural features and expression.",
"journal": "Comp. Biochem. Physiol. B, Biochem. Mol. Biol.",
"date": "2008",
"authors": "Liu Yu-Fan, Liu Hsin-Yu, Tu Li-Chun, Lin Chieh-Wen, Hsiao Kuang-Ming, Pan Huichin",
"reference": {
"type": "PubMed",
"id": "18606240",
"url": "https://pubmed.ncbi.nlm.nih.gov/18606240"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NE31-1",
"protein_name": "Muscleblind-like protein 1 isoform 2",
"gene_name": "mbnl1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BFL2-1",
"protein_name": "Muscleblind-like protein 2 isoform X1",
"gene_name": "mbnl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NE31",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NE31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.18606240",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Zebrafish deficient for Muscleblind-like 2 exhibit features of myotonic dystrophy.",
"journal": "Dis. Model. Mech.",
"date": "2011",
"authors": "Machuca-Tzili Laura E, Buxton Sarah, Thorpe Aaran, Timson Cathy M, Wigmore Peter, Luther Pradeep K, Brook J David",
"reference": {
"type": "PubMed",
"id": "21303839",
"url": "https://pubmed.ncbi.nlm.nih.gov/21303839"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NE31-1",
"protein_name": "Muscleblind-like protein 1 isoform 2",
"gene_name": "mbnl1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M2BFL2-1",
"protein_name": "Muscleblind-like protein 2 isoform X1",
"gene_name": "mbnl2",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NE31",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NE31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.21303839",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "scaRNAs regulate splicing and vertebrate heart development.",
"journal": "Biochim. Biophys. Acta",
"date": "2015",
"authors": "Patil Prakash, Kibiryeva Nataliya, Uechi Tamayo, Marshall Jennifer, O'Brien James E, Artman Michael, Kenmochi Naoya, Bittel Douglas C",
"reference": {
"type": "PubMed",
"id": "25916634",
"url": "https://pubmed.ncbi.nlm.nih.gov/25916634"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NE31-1",
"protein_name": "Muscleblind-like protein 1 isoform 2",
"gene_name": "mbnl1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NE31",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NE31"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.25916634",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Sex differences in DNA methylation and expression in zebrafish brain: a test of an extended 'male sex drive' hypothesis.",
"journal": "Gene",
"date": "2016",
"authors": "Chatterjee Aniruddha, Lagisz Malgorzata, Rodger Euan J, Zhen Li, Stockwell Peter A, Duncan Elizabeth J, Horsfield Julia A, Jeyakani Justin, Mathavan Sinnakaruppan, Ozaki Yuichi, Nakagawa Shinichi",
"reference": {
"type": "PubMed",
"id": "27259666",
"url": "https://pubmed.ncbi.nlm.nih.gov/27259666"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NGD4-1",
"protein_name": "Tripartite motif containing 35-31",
"gene_name": "trim35-31",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "F1QXH6-1",
"protein_name": "Uncharacterized protein LOC563420",
"gene_name": "si:ch211-245h14.1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB13A9Z6-1",
"protein_name": "ALK and LTK ligand 2a isoform X1; ALK and LTK ligand 2a precursor",
"gene_name": "alkal2a",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58I1V4-1",
"protein_name": "Phosphatase and actin regulator",
"gene_name": "phactr1",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0A8M9QG29-1",
"protein_name": "HECT-type E3 ubiquitin transferase",
"gene_name": "hecw1b",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AB32U0D4-1",
"protein_name": "Platelet glycoprotein Ib beta chain isoform X1",
"gene_name": "gp1bb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NGD4",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NGD4"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.27259666",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 6
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Characterization and comparative analyses of zebrafish intelectins: highly conserved sequences, diversified structures and functions.",
"journal": "Fish Shellfish Immunol.",
"date": "2009",
"authors": "Lin Bin, Cao Zhen, Su Peng, Zhang Haibo, Li Mengzhen, Lin Yiqun, Zhao Dezhi, Shen Yang, Jing Chenfeng, Chen Shangwu, Xu Anlong",
"reference": {
"type": "PubMed",
"id": "19100836",
"url": "https://pubmed.ncbi.nlm.nih.gov/19100836"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NUF6-1",
"protein_name": "Intelectin 3 precursor",
"gene_name": "itln3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58JFF1-1",
"protein_name": "Intelectin-1 isoform X1",
"gene_name": "itln1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NUF6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NUF6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.19100836",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Different expression profiles of Interleukin 11 (IL-11), Intelectin (ITLN) and Purine nucleoside phosphorylase 5a (PNP 5a) in crucian carp (Carassius auratus gibelio) in response to Cyprinid herpesvirus 2 and Aeromonas hydrophila.",
"journal": "Fish Shellfish Immunol.",
"date": "2014",
"authors": "Podok Patarida, Xu Lijuan, Xu Dan, Lu Liqun",
"reference": {
"type": "PubMed",
"id": "24636855",
"url": "https://pubmed.ncbi.nlm.nih.gov/24636855"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NUF6-1",
"protein_name": "Intelectin 3 precursor",
"gene_name": "itln3",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NUF6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NUF6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.24636855",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "The D5 region of the intelectin domain is a new type of carbohydrate recognition domain in the intelectin gene family.",
"journal": "Dev. Comp. Immunol.",
"date": "2018",
"authors": "Yan Jie, Chen Lei, Liu Zhuang, Chen Yonglin, Sun Ying, Han Jia, Feng Lijun",
"reference": {
"type": "PubMed",
"id": "29621532",
"url": "https://pubmed.ncbi.nlm.nih.gov/29621532"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NUF6-1",
"protein_name": "Intelectin 3 precursor",
"gene_name": "itln3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58JFF1-1",
"protein_name": "Intelectin-1 isoform X1",
"gene_name": "itln1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NUF6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NUF6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.29621532",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Intelectin 3 is dispensable for resistance against a mycobacterial infection in zebrafish (Danio rerio).",
"journal": "Sci. Rep.",
"date": "2019",
"authors": "Ojanen Markus J T, Uusi-M\u00e4kel\u00e4 Meri I E, Harjula Sanna-Kaisa E, Saralahti Anni K, Oksanen Kaisa E, K\u00e4hk\u00f6nen Niklas, M\u00e4\u00e4tt\u00e4 Juha A E, Hyt\u00f6nen Vesa P, Pesu Marko, R\u00e4met Mika",
"reference": {
"type": "PubMed",
"id": "30700796",
"url": "https://pubmed.ncbi.nlm.nih.gov/30700796"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1NUF6-1",
"protein_name": "Intelectin 3 precursor",
"gene_name": "itln3",
"tax_name": "Zebrafish"
},
{
"uniprot_canonical_ac": "A0AC58JFF1-1",
"protein_name": "Intelectin-1 isoform X1",
"gene_name": "itln1",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1NUF6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1NUF6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.30700796",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 2
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
},
{
"title": "Cloning and tissue localization of a novel zebrafish RdgB homolog that lacks a phospholipid transfer domain.",
"journal": "Vis. Neurosci.",
"date": "2000",
"authors": "Elagin V A, Elagina R B, Doro C J, Vihtelic T S, Hyde D R",
"reference": {
"type": "PubMed",
"id": "10824684",
"url": "https://pubmed.ncbi.nlm.nih.gov/10824684"
},
"referenced_glycans": [],
"referenced_proteins": [
{
"uniprot_canonical_ac": "A0A8M1P8F6-1",
"protein_name": "Membrane-associated phosphatidylinositol transfer protein 3",
"gene_name": "plrdgb",
"tax_name": "Zebrafish"
}
],
"species": [
{
"name": "Danio rerio",
"taxid": 7955,
"evidence": [
{
"database": "UniProtKB",
"id": "A0A8M1P8F6",
"url": "https://www.uniprot.org/uniprotkb/A0A8M1P8F6"
}
],
"common_name": "Zebrafish",
"glygen_name": "Zebrafish",
"reference_species": "Danio rerio [7955]"
}
],
"record_id": "pubmed.10824684",
"abstract": "",
"glycosylation": [],
"mutagenesis": [],
"snv": [],
"phosphorylation": [],
"glycation": [],
"section_stats": [
{
"table_id": "referenced_proteins",
"table_stats": [
{
"field": "total",
"count": 1
}
],
"sort_fields": [
"uniprot_canonical_ac",
"protein_name",
"gene_name",
"tax_name"
]
},
{
"table_id": "referenced_glycans",
"table_stats": [
{
"field": "total",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "phosphorylation",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_reported_with_glycan",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_predicted",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
},
{
"table_id": "glycosylation_automatic_literature_mining",
"table_stats": [
{
"field": "total",
"count": 0
},
{
"field": "total_sites",
"count": 0
},
{
"field": "n_linked_sites",
"count": 0
},
{
"field": "o_linked_sites",
"count": 0
},
{
"field": "n_linked_glycan_sites",
"count": 0
},
{
"field": "o_linked_glycan_sites",
"count": 0
},
{
"field": "n_linked_glycans",
"count": 0
},
{
"field": "o_linked_glycans",
"count": 0
}
],
"sort_fields": []
}
]
}
]