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"Scott Craig M, Kruse Kristina B, Schmidt B\u00e9la Z, Perlmutter David H, McCracken Ardythe A, Brodsky Jeffrey L", "reference": { "type": "PubMed", "id": "17634286", "url": "https://pubmed.ncbi.nlm.nih.gov/17634286" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P36040-1", "protein_name": "Proteasome assembly chaperone 2", "gene_name": "ADD66", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P36040", "url": "https://www.uniprot.org/uniprotkb/P36040" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.17634286", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Cell. Biol.", "date": "1994", "authors": "Gimeno C J, Fink G R", "reference": { "type": "PubMed", "id": "8114741", "url": "https://pubmed.ncbi.nlm.nih.gov/8114741" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P36093-1", "protein_name": "Putative transcription factor PHD1", "gene_name": "PHD1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P36093", "url": "https://www.uniprot.org/uniprotkb/P36093" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8114741", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, 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ribosomal subunit assembly.", "journal": "RNA (New York, N.Y.)", "date": "1998-05", "authors": "Daugeron M C, Linder P", "reference": { "type": "PubMed", "id": "9582098", "url": "https://pubmed.ncbi.nlm.nih.gov/9582098" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P36120-1", "protein_name": "ATP-dependent RNA helicase DBP7", "gene_name": "DBP7", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P36120", "url": "https://www.uniprot.org/uniprotkb/P36120" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9582098", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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Natl. Acad. Sci. U.S.A.", "date": "1999", "authors": "Flores A, Briand J F, Gadal O, Andrau J C, Rubbi L, Van Mullem V, Boschiero C, Goussot M, Marck C, Carles C, Thuriaux P, Sentenac A, Werner M", "reference": { "type": "PubMed", "id": "10393904", "url": "https://pubmed.ncbi.nlm.nih.gov/10393904" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P36121-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC5", "gene_name": "RPC37", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25441-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC4", "gene_name": "RPC53", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P07703-1", "protein_name": "DNA-directed RNA polymerases I and III subunit RPAC1", "gene_name": "RPC40", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P36121", "url": "https://www.uniprot.org/uniprotkb/P36121" } ], 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and reinitiation.", "journal": "The EMBO journal", "date": "2006-01-11", "authors": "Landrieux Emilie, Alic Nazif, Ducrot C\u00e9cile, Acker Jo\u00ebl, Riva Michel, Carles Christophe", "reference": { "type": "PubMed", "id": "16362040", "url": "https://pubmed.ncbi.nlm.nih.gov/16362040" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P36121-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC5", "gene_name": "RPC37", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q04307-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC10", "gene_name": "RPC11", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P25441-1", "protein_name": "DNA-directed RNA polymerase III subunit RPC4", "gene_name": "RPC53", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P36121", "url": "https://www.uniprot.org/uniprotkb/P36121" } ], 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"sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Fcf1p and Fcf2p are novel nucleolar Saccharomyces cerevisiae proteins involved in 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Biol.", "date": "1992", "authors": "Wang S S, Stanford D R, Silvers C D, Hopper A K", "reference": { "type": "PubMed", "id": "1588961", "url": "https://pubmed.ncbi.nlm.nih.gov/1588961" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P36527-1", "protein_name": "Large ribosomal subunit protein mL40", "gene_name": "MRPL28", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q00947-1", "protein_name": "Transcription factor STP1", "gene_name": "STP1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P36527", "url": "https://www.uniprot.org/uniprotkb/P36527" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.1588961", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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Purification, properties, localization, and processing by protease B.", "journal": "J. Biol. Chem.", "date": "1994", "authors": "Yasuhara T, Nakai T, Ohashi A", "reference": { "type": "PubMed", "id": "8175799", "url": "https://pubmed.ncbi.nlm.nih.gov/8175799" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37302-1", "protein_name": "Aminopeptidase Y", "gene_name": "APE3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P37302", "url": "https://www.uniprot.org/uniprotkb/P37302" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8175799", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Molecular cloning of the aminopeptidase Y gene of Saccharomyces cerevisiae. Sequence analysis and gene disruption of a new aminopeptidase.", "journal": "J. Biol. Chem.", "date": "1994", "authors": "Nishizawa M, Yasuhara T, Nakai T, Fujiki Y, Ohashi A", "reference": { "type": "PubMed", "id": "8175800", "url": "https://pubmed.ncbi.nlm.nih.gov/8175800" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P37302-1", "protein_name": "Aminopeptidase Y", "gene_name": "APE3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P37302", "url": "https://www.uniprot.org/uniprotkb/P37302" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.8175800", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Isolation and characterization of AAP1. A gene encoding an alanine/arginine aminopeptidase in yeast.", "journal": "J. Biol. 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Saccharomyces cerevisiae Sps1p regulates trafficking of enzymes required for spore wall synthesis.", "journal": "Eukaryot. Cell", "date": "2005", "authors": "Iwamoto Michelle A, Fairclough Stephen R, Rudge Simon A, Engebrecht Joanne", "reference": { "type": "PubMed", "id": "15755916", "url": "https://pubmed.ncbi.nlm.nih.gov/15755916" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38125-1", "protein_name": "Dityrosine transporter 1", "gene_name": "DTR1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P39000-1", "protein_name": "Protein SHC1", "gene_name": "SHC1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38125", "url": "https://www.uniprot.org/uniprotkb/P38125" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15755916", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Phospholipase D and the SNARE Sso1p are necessary for vesicle fusion during sporulation in yeast.", "journal": "J. Cell Sci.", "date": "2006", "authors": "Nakanishi Hideki, Morishita Masayo, Schwartz Cindi L, Coluccio Alison, Engebrecht JoAnne, Neiman Aaron M", "reference": { "type": "PubMed", "id": "16554438", "url": "https://pubmed.ncbi.nlm.nih.gov/16554438" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38125-1", "protein_name": "Dityrosine transporter 1", "gene_name": "DTR1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38125", "url": "https://www.uniprot.org/uniprotkb/P38125" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.16554438", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], 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Demonstration of a transporter (FUI1) with high uridine selectivity in plasma membranes and a transporter (FUN26) with broad nucleoside selectivity in intracellular membranes.", "journal": "J. Biol. Chem.", "date": "2000", "authors": "Vickers M F, Yao S Y, Baldwin S A, Young J D, Cass C E", "reference": { "type": "PubMed", "id": "10827169", "url": "https://pubmed.ncbi.nlm.nih.gov/10827169" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38196-1", "protein_name": "Uridine permease", "gene_name": "FUI1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P31381-1", "protein_name": "Nucleoside transporter FUN26", "gene_name": "FUN26", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38196", "url": "https://www.uniprot.org/uniprotkb/P38196" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.10827169", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The ORF YBL042 of Saccharomyces cerevisiae encodes a uridine permease.", "journal": "FEMS Microbiol. Lett.", "date": "1998", "authors": "Wagner R, de Montigny J, de Wergifosse P, Souciet J L, Potier S", "reference": { "type": "PubMed", "id": "9485596", "url": "https://pubmed.ncbi.nlm.nih.gov/9485596" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38196-1", "protein_name": "Uridine permease", "gene_name": "FUI1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38196", "url": "https://www.uniprot.org/uniprotkb/P38196" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9485596", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", 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TATA-binding protein is not required for basal transcription.", "journal": "The Journal of biological chemistry", "date": "1998-12-11", "authors": "Keener J, Josaitis C A, Dodd J A, Nomura M", "reference": { "type": "PubMed", "id": "9837969", "url": "https://pubmed.ncbi.nlm.nih.gov/9837969" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38204-1", "protein_name": "RNA polymerase I-specific transcription initiation factor RRN10", "gene_name": "RRN10", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53437-1", "protein_name": "RNA polymerase I-specific transcription initiation factor RRN9", "gene_name": "RRN9", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q02983-1", "protein_name": "RNA polymerase I-specific transcription initiation factor RRN5", "gene_name": "RRN5", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38204", 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approach for identifying genes by the activity of their products.", "journal": "Science (New York, N.Y.)", "date": "1999-11-05", "authors": "Martzen M R, McCraith S M, Spinelli S L, Torres F M, Fields S, Grayhack E J, Phizicky E M", "reference": { "type": "PubMed", "id": "10550052", "url": "https://pubmed.ncbi.nlm.nih.gov/10550052" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38218-1", "protein_name": "ADP-ribose 1''-phosphate phosphatase", "gene_name": "POA1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38218", "url": "https://www.uniprot.org/uniprotkb/P38218" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.10550052", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], 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"count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "A highly specific phosphatase that acts on ADP-ribose 1''-phosphate, a metabolite of tRNA splicing in Saccharomyces cerevisiae.", "journal": "Nucleic acids research", "date": "2005", "authors": "Shull Neil P, Spinelli Sherry L, Phizicky Eric M", "reference": { "type": "PubMed", "id": "15684411", "url": "https://pubmed.ncbi.nlm.nih.gov/15684411" }, 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Reduced ADP-ribosyl hydrolase activity; when associated with A-92.", "evidence": [ { "database": "UniProtKB", "id": "A1Z1Q3", "url": "https://www.uniprot.org/uniprotkb/A1Z1Q3" }, { "database": "PubMed", "id": "23474712", "url": "https://pubmed.ncbi.nlm.nih.gov/23474712" }, { "database": "PubMed", "id": "23474714", "url": "https://pubmed.ncbi.nlm.nih.gov/23474714" } ], "uniprot_canonical_ac": "A1Z1Q3-2" }, { "start_pos": 188, "end_pos": 188, "sequence_org": "G", "sequence_mut": "E", "comment": "Abolishes interaction with ADP-ribosylated proteins. Strongly reduced ADP-ribosyl hydrolase activity.", "evidence": [ { "database": "UniProtKB", "id": "A1Z1Q3", "url": "https://www.uniprot.org/uniprotkb/A1Z1Q3" }, { "database": "PubMed", "id": "23474712", "url": "https://pubmed.ncbi.nlm.nih.gov/23474712" } ], "uniprot_canonical_ac": "A1Z1Q3-2" }, { "start_pos": 92, "end_pos": 92, "sequence_org": "N", "sequence_mut": "A", "comment": "Reduced ADP-ribosyl hydrolase activity; when associated with A-102.", "evidence": [ { "database": "UniProtKB", "id": "A1Z1Q3", "url": "https://www.uniprot.org/uniprotkb/A1Z1Q3" }, { "database": "PubMed", "id": "23474712", "url": "https://pubmed.ncbi.nlm.nih.gov/23474712" } ], "uniprot_canonical_ac": "A1Z1Q3-2" }, { "start_pos": 174, "end_pos": 174, "sequence_org": "N", "sequence_mut": "A", "comment": "Slightly reduced ADP-ribosyl hydrolase activity; when associated with A-184. Reduces O-acetyl-ADP-ribose deacetylase activity by 93%; when associated with A-184. No significant effect on affinity for substrate.", "evidence": [ { "database": "UniProtKB", "id": "Q9BQ69", "url": "https://www.uniprot.org/uniprotkb/Q9BQ69" }, { "database": "PubMed", "id": "23474712", "url": "https://pubmed.ncbi.nlm.nih.gov/23474712" }, { "database": "PubMed", "id": "21257746", "url": "https://pubmed.ncbi.nlm.nih.gov/21257746" } ], "uniprot_canonical_ac": "Q9BQ69-1" }, { "start_pos": 184, "end_pos": 184, "sequence_org": "D", "sequence_mut": "A", "comment": "Slightly reduced ADP-ribosyl hydrolase activity; when associated with A-174. Reduces O-acetyl-ADP-ribose deacetylase activity by 93%; when associated with A-174. 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Cell. Proteomics", "date": "2006", "authors": "Guerrero Cortnie, Tagwerker Christian, Kaiser Peter, Huang Lan", "reference": { "type": "PubMed", "id": "16284124", "url": "https://pubmed.ncbi.nlm.nih.gov/16284124" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38219-1", "protein_name": "Obg-like ATPase 1", "gene_name": "OLA1", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q01939-1", "protein_name": "26S proteasome regulatory subunit 8 homolog", "gene_name": "RPT6", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38219", "url": "https://www.uniprot.org/uniprotkb/P38219" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.16284124", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 2 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "The H2O2 stimulon in Saccharomyces cerevisiae.", "journal": "J. Biol. Chem.", "date": "1998", "authors": "Godon C, Lagniel G, Lee J, Buhler J M, Kieffer S, Perrot M, Boucherie H, Toledano M B, Labarre J", "reference": { "type": "PubMed", "id": "9712873", "url": "https://pubmed.ncbi.nlm.nih.gov/9712873" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38219-1", "protein_name": "Obg-like ATPase 1", "gene_name": "OLA1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38219", "url": "https://www.uniprot.org/uniprotkb/P38219" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9712873", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Genomic approach to identification of mutations affecting caspofungin susceptibility in Saccharomyces cerevisiae.", "journal": "Antimicrob. Agents Chemother.", "date": "2004", "authors": "Markovich Sarit, Yekutiel Aya, Shalit Itamar, Shadkchan Yona, Osherov Nir", "reference": { "type": "PubMed", "id": "15388447", "url": "https://pubmed.ncbi.nlm.nih.gov/15388447" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38279-1", "protein_name": "Vacuolar histidine transporter YPQ3", "gene_name": "RTC2", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38279", "url": "https://www.uniprot.org/uniprotkb/P38279" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.15388447", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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[] } ] }, { "title": "Elevated levels of a U4/U6.U5 snRNP-associated protein, Spp381p, rescue a mutant defective in spliceosome maturation.", "journal": "Molecular and cellular biology", "date": "1999-01", "authors": "Lybarger S, Beickman K, Brown V, Dembla-Rajpal N, Morey K, Seipelt R, Rymond B C", "reference": { "type": "PubMed", "id": "9858581", "url": "https://pubmed.ncbi.nlm.nih.gov/9858581" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38282-1", "protein_name": "Pre-mRNA-splicing factor SPP381", "gene_name": "SPP381", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38282", "url": "https://www.uniprot.org/uniprotkb/P38282" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.9858581", "abstract": "", "glycosylation": [], "mutagenesis": [], 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cerevisiae.", "journal": "Yeast", "date": "2008", "authors": "Pir Pinar, Kirdar Bet\u00fcl, Hayes Andrew, Onsan Z Ilsen, Ulgen Kutlu O, Oliver Stephen G", "reference": { "type": "PubMed", "id": "18727146", "url": "https://pubmed.ncbi.nlm.nih.gov/18727146" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38300-1", "protein_name": "Inner membrane mitoribosome receptor MBA1, mitochondrial", "gene_name": "MBA1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38300", "url": "https://www.uniprot.org/uniprotkb/P38300" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.18727146", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ 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Biol. Chem.", "date": "2010", "authors": "Gruschke Steffi, Gr\u00f6ne Kerstin, Heublein Manfred, H\u00f6lz Stefanie, Israel Lars, Imhof Axel, Herrmann Johannes M, Ott Martin", "reference": { "type": "PubMed", "id": "20404317", "url": "https://pubmed.ncbi.nlm.nih.gov/20404317" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38300-1", "protein_name": "Inner membrane mitoribosome receptor MBA1, mitochondrial", "gene_name": "MBA1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38300", "url": "https://www.uniprot.org/uniprotkb/P38300" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.20404317", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", 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structural and substrate specificity classification of the Saccharomyces cerevisiae methyltransferome.", "journal": "PloS one", "date": "2011", "authors": "Wlodarski Tomasz, Kutner Jan, Towpik Joanna, Knizewski Lukasz, Rychlewski Leszek, Kudlicki Andrzej, Rowicka Maga, Dziembowski Andrzej, Ginalski Krzysztof", "reference": { "type": "PubMed", "id": "21858014", "url": "https://pubmed.ncbi.nlm.nih.gov/21858014" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38347-1", "protein_name": "Protein-lysine N-methyltransferase EFM2", "gene_name": "EFM2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P40493-1", "protein_name": "25S rRNA (uridine(2634)-N(3))-methyltransferase", "gene_name": "BMT5", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P53200-1", "protein_name": "Protein-lysine N-methyltransferase EFM5", "gene_name": "EFM5", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q05874-1", "protein_name": "Protein N-terminal and 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"count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": 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0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Methylation of translation-associated proteins in Saccharomyces cerevisiae: Identification of methylated lysines and their methyltransferases.", "journal": "Proteomics", "date": "2012-04", "authors": "Couttas Timothy A, Raftery Mark J, Padula Matthew P, Herbert Ben R, Wilkins Marc R", "reference": { "type": "PubMed", "id": "22522802", "url": "https://pubmed.ncbi.nlm.nih.gov/22522802" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38347-1", "protein_name": "Protein-lysine N-methyltransferase EFM2", "gene_name": "EFM2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "Q3E757-1", "protein_name": "Large ribosomal subunit protein uL5B", "gene_name": "RPL11B", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P38732-1", "protein_name": "Protein-lysine 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"count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": 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eukaryotic lysine methyltransferase.", "journal": "Biochemical and biophysical research communications", "date": "2014-08-22", "authors": "Zhang Lelin, Hamey Joshua J, Hart-Smith Gene, Erce Melissa A, Wilkins Marc R", "reference": { "type": "PubMed", "id": "25086354", "url": "https://pubmed.ncbi.nlm.nih.gov/25086354" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38347-1", "protein_name": "Protein-lysine N-methyltransferase EFM2", "gene_name": "EFM2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P32324-1", "protein_name": "Elongation factor 2", "gene_name": "EFT1; EFT2", "tax_name": "Baker's yeast" }, { "uniprot_canonical_ac": "P47163-1", "protein_name": "Protein-lysine N-methyltransferase EFM3", "gene_name": "EFM3", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38347", "url": "https://www.uniprot.org/uniprotkb/P38347" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.25086354", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 3 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Translational roles of elongation factor 2 protein lysine methylation.", "journal": 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Genet.", "date": "1995", "authors": "Smith F W, Hawkesford M J, Prosser I M, Clarkson D T", "reference": { "type": "PubMed", "id": "7616962", "url": "https://pubmed.ncbi.nlm.nih.gov/7616962" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38359-1", "protein_name": "Sulfate permease 1", "gene_name": "SUL1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38359", "url": "https://www.uniprot.org/uniprotkb/P38359" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.7616962", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of SFP2, a putative sulfate permease gene of Saccharomyces cerevisiae.", "journal": "Biochem. Biophys. Res. Commun.", "date": "1995", "authors": "Jin Y H, Jang Y K, Kim M J, Rad M R, Kirchrath L, Seong R H, Hong S H, Hollenberg C P, Park S D", "reference": { "type": "PubMed", "id": "7677785", "url": "https://pubmed.ncbi.nlm.nih.gov/7677785" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P38359-1", "protein_name": "Sulfate permease 1", "gene_name": "SUL1", "tax_name": "Baker's yeast" } ], "species": [ { "name": "Saccharomyces cerevisiae S288C", "taxid": 559292, "evidence": [ { "database": "UniProtKB", "id": "P38359", "url": "https://www.uniprot.org/uniprotkb/P38359" } ], "common_name": "Baker's yeast", "glygen_name": "Yeast", "reference_species": "Saccharomyces cerevisiae S288C [559292]" } ], "record_id": "pubmed.7677785", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ 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"glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] } ]