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[] } ] }, { "title": "Identification and characterization of human TIPARP gene within the CCNL amplicon at human chromosome 3q25.31.", "journal": "Int. J. 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Botchan A, Barda S, Levitin F, Weiss M, Pastan I, Wreschner DH, Paz G, Kleiman SE", "reference": { "type": "PubMed", "id": "22402205", "url": "https://pubmed.ncbi.nlm.nih.gov/22402205" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "P0C8F1-1", "protein_name": "Prostate and testis expressed protein 4", "gene_name": "PATE4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q6UY27-1", "protein_name": "Prostate and testis expressed protein 2", "gene_name": "PATE2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WXA2-1", "protein_name": "Prostate and testis expressed protein 1", "gene_name": "PATE1", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "P0C8F1", "url": "https://www.uniprot.org/uniprotkb/P0C8F1" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.22402205", "abstract": "", "glycosylation": [], 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"authors": "Christou-Kent M, Kherraf ZE, Amiri-Yekta A, Le Blevec E, Karaouzene T, Conne B, Escoffier J, Assou S, Guttin A, Lambert E, Martinez G, Boguenet M, Fourati Ben Mustapha S, Cedrin Durnerin I, Halouani L, Marrakchi O, Makni M, Latrous H, Kharouf M, Coutton C, Thierry-Mieg N, Nef S, Bottari SP, Zouari R, Issartel JP, Ray PF, Arnoult C", "reference": { "type": "PubMed", "id": "29661911", "url": "https://pubmed.ncbi.nlm.nih.gov/29661911" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "C9JE40-1", "protein_name": "Protein PAT1 homolog 2", "gene_name": "PATL2", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "C9JE40", "url": "https://www.uniprot.org/uniprotkb/C9JE40" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.29661911", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], 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Chem.", "date": "1999", "authors": "Shimizu N, Itoh R, Hirono Y, Otera H, Ghaedi K, Tateishi K, Tamura S, Okumoto K, Harano T, Mukai S, Fujiki Y", "reference": { "type": "PubMed", "id": "10212238", "url": "https://pubmed.ncbi.nlm.nih.gov/10212238" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q642G4-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "Pex14", "tax_name": "Rat" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75381", "url": "https://www.uniprot.org/uniprotkb/O75381" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.10212238", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { 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Biol. Chem.", "date": "2001", "authors": "Saidowsky J, Dodt G, Kirchberg K, Wegner A, Nastainczyk W, Kunau WH, Schliebs W", "reference": { "type": "PubMed", "id": "11438541", "url": "https://pubmed.ncbi.nlm.nih.gov/11438541" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P50542-1", "protein_name": "Peroxisomal targeting signal 1 receptor", "gene_name": "PEX5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75381", "url": "https://www.uniprot.org/uniprotkb/O75381" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 118, "end_pos": 118, "sequence_org": "W", "sequence_mut": "A", "comment": "Strongly reduced interaction with PEX14.", "evidence": [ { "database": 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"o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "PEX3 functions as a PEX19 docking factor in the import of class I peroxisomal membrane proteins.", "journal": "The Journal of cell biology", "date": "2004", "authors": "Fang Y, Morrell JC, Jones JM, Gould SJ", "reference": { "type": "PubMed", "id": "15007061", "url": "https://pubmed.ncbi.nlm.nih.gov/15007061" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3D6-1", "protein_name": "Mitochondrial fission 1 protein", "gene_name": "FIS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43808-1", "protein_name": "Peroxisomal membrane protein 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"gene_name": "ABCA6", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ4-1", "protein_name": "ATP-binding cassette sub-family A member 10", "gene_name": "ABCA10", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB36-1", "protein_name": "Ganglioside-induced differentiation-associated protein 1", "gene_name": "GDAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NBU5-1", "protein_name": "Outer mitochondrial transmembrane helix translocase", "gene_name": "ATAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5Y5-1", "protein_name": "Peroxisomal membrane protein PEX16", "gene_name": "PEX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56589-1", "protein_name": "Peroxisomal biogenesis factor 3", "gene_name": "PEX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6I8-1", "protein_name": "Peroxisomal membrane protein 4", "gene_name": "PXMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q86UK0-1", "protein_name": "Glucosylceramide transporter ABCA12", "gene_name": "ABCA12", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8IUA7-1", "protein_name": "ATP-binding cassette sub-family A member 9", "gene_name": "ABCA9", "tax_name": "Human" }, { "uniprot_canonical_ac": "P02647-1", "protein_name": "Apolipoprotein A-I", "gene_name": "APOA1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBJ2-1", "protein_name": "ATP-binding cassette sub-family D member 2", "gene_name": "ABCD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33897-1", "protein_name": "ATP-binding cassette sub-family D member 1", "gene_name": "ABCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28288-1", "protein_name": "ATP-binding cassette sub-family D member 3", "gene_name": "ABCD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40855-1", "protein_name": "Peroxisomal biogenesis factor 19", "gene_name": "PEX19", "tax_name": "Human" }, { "uniprot_canonical_ac": "P45844-1", "protein_name": "ATP-binding cassette sub-family G member 1", "gene_name": "ABCG1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8WWZ7-1", "protein_name": "Cholesterol transporter ABCA5", "gene_name": "ABCA5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9BZC7-1", "protein_name": "ATP-binding cassette sub-family A member 2", "gene_name": "ABCA2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q99758-1", "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "ABCA3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H221-1", "protein_name": "ATP-binding cassette sub-family G member 8", "gene_name": "ABCG8", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9H222-1", "protein_name": "ATP-binding cassette sub-family G member 5", "gene_name": "ABCG5", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75381", "url": "https://www.uniprot.org/uniprotkb/O75381" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 125, "end_pos": 125, "sequence_org": "L", "sequence_mut": "P", "comment": "Abolishes binding to PEX19 without affecting targeting to peroxisomes; when associated with D-134.", "evidence": [ { "database": "UniProtKB", "id": "P56589", "url": "https://www.uniprot.org/uniprotkb/P56589" }, { "database": "PubMed", "id": "15007061", "url": "https://pubmed.ncbi.nlm.nih.gov/15007061" } ], "uniprot_canonical_ac": "P56589-1" }, { "start_pos": 134, "end_pos": 134, "sequence_org": "N", "sequence_mut": "D", "comment": "Abolishes binding to PEX19 without affecting targeting to peroxisomes; when associated with P-125.", "evidence": [ { "database": "UniProtKB", "id": "P56589", "url": 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"count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Identification of a new complementation group of the peroxisome biogenesis disorders and PEX14 as the mutated gene.", "journal": "Hum. Mutat.", "date": "2004", "authors": "Shimozawa Nobuyuki, Tsukamoto Toshiro, Nagase Tomoko, Takemoto Yasuhiko, Koyama Naoki, Suzuki Yasuyuki, Komori Masayuki, Osumi Takashi, Jeannette Gootjes, Wanders Ronald J A, Kondo Naomi", "reference": { "type": "PubMed", "id": "15146459", "url": "https://pubmed.ncbi.nlm.nih.gov/15146459" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75381", "url": "https://www.uniprot.org/uniprotkb/O75381" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15146459", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 1 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported_with_glycan", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Analysis of human Pex19p's domain structure by pentapeptide scanning mutagenesis.", "journal": "Journal of molecular biology", "date": "2005", "authors": "Fransen M, Vastiau I, Brees C, Brys V, Mannaerts GP, Van Veldhoven PP", "reference": { "type": "PubMed", "id": "15713480", "url": "https://pubmed.ncbi.nlm.nih.gov/15713480" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", 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"gene_name": "PXMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBJ2-1", "protein_name": "ATP-binding cassette sub-family D member 2", "gene_name": "ABCD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33897-1", "protein_name": "ATP-binding cassette sub-family D member 1", "gene_name": "ABCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28288-1", "protein_name": "ATP-binding cassette sub-family D member 3", "gene_name": "ABCD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40855-1", "protein_name": "Peroxisomal biogenesis factor 19", "gene_name": "PEX19", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75381", "url": "https://www.uniprot.org/uniprotkb/O75381" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.15713480", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "phosphorylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_reported", "table_stats": [ { "field": "total", "count": 0 }, { "field": 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"n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "Function of the PEX19-binding site of human adrenoleukodystrophy protein as targeting motif in man and yeast. PMP targeting is evolutionarily conserved.", "journal": "The Journal of biological chemistry", "date": "2005", "authors": "Halbach A, Lorenzen S, Landgraf C, Volkmer-Engert R, Erdmann R, Rottensteiner H", "reference": { "type": "PubMed", "id": "15781447", "url": "https://pubmed.ncbi.nlm.nih.gov/15781447" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3D6-1", "protein_name": "Mitochondrial fission 1 protein", "gene_name": "FIS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43808-1", "protein_name": "Peroxisomal membrane protein PMP34", "gene_name": "SLC25A17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] } ] }, { "title": "In vitro transport of membrane proteins to peroxisomes by shuttling receptor Pex19p.", "journal": "The Journal of biological chemistry", "date": "2006", "authors": "Matsuzono Y, Fujiki Y", "reference": { "type": "PubMed", "id": "16280322", "url": "https://pubmed.ncbi.nlm.nih.gov/16280322" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", 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"Human" }, { "uniprot_canonical_ac": "Q7Z412-1", "protein_name": "Peroxisome assembly protein 26", "gene_name": "PEX26", "tax_name": "Human" }, { "uniprot_canonical_ac": "O96011-1", "protein_name": "Peroxisomal membrane protein 11B", "gene_name": "PEX11B", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q5T8D3-1", "protein_name": "Acyl-CoA-binding domain-containing protein 5", "gene_name": "ACBD5", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8TB36-1", "protein_name": "Ganglioside-induced differentiation-associated protein 1", "gene_name": "GDAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NBU5-1", "protein_name": "Outer mitochondrial transmembrane helix translocase", "gene_name": "ATAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5Y5-1", "protein_name": "Peroxisomal membrane protein PEX16", "gene_name": "PEX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56589-1", "protein_name": "Peroxisomal biogenesis factor 3", "gene_name": "PEX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6I8-1", "protein_name": "Peroxisomal membrane protein 4", "gene_name": "PXMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBJ2-1", "protein_name": "ATP-binding cassette sub-family D member 2", "gene_name": "ABCD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33897-1", "protein_name": "ATP-binding cassette sub-family D member 1", "gene_name": "ABCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28288-1", "protein_name": "ATP-binding cassette sub-family D member 3", "gene_name": "ABCD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40855-1", "protein_name": "Peroxisomal biogenesis factor 19", "gene_name": "PEX19", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75381", "url": "https://www.uniprot.org/uniprotkb/O75381" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.17069900", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", 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"count": 0 } ], "sort_fields": [] } ] }, { "title": "Characterization of the interaction between recombinant human peroxin Pex3p and Pex19p: identification of TRP-104 IN Pex3p as a critical residue for the interaction.", "journal": "The Journal of biological chemistry", "date": "2008", "authors": "Sato Y, Shibata H, Nakano H, Matsuzono Y, Kashiwayama Y, Kobayashi Y, Fujiki Y, Imanaka T, Kato H", "reference": { "type": "PubMed", "id": "18174172", "url": "https://pubmed.ncbi.nlm.nih.gov/18174172" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3D6-1", "protein_name": "Mitochondrial fission 1 protein", "gene_name": "FIS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43808-1", 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"table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_predicted", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { "field": "o_linked_glycans", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation_automatic_literature_mining", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", 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"uniprot_canonical_ac": "P28288-1", "protein_name": "ATP-binding cassette sub-family D member 3", "gene_name": "ABCD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40855-1", "protein_name": "Peroxisomal biogenesis factor 19", "gene_name": "PEX19", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75381", "url": "https://www.uniprot.org/uniprotkb/O75381" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "record_id": "pubmed.18782765", "abstract": "", "glycosylation": [], "mutagenesis": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": 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"uniprot_canonical_ac": "Q8TB36-1", "protein_name": "Ganglioside-induced differentiation-associated protein 1", "gene_name": "GDAP1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q8NBU5-1", "protein_name": "Outer mitochondrial transmembrane helix translocase", "gene_name": "ATAD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y5Y5-1", "protein_name": "Peroxisomal membrane protein PEX16", "gene_name": "PEX16", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q92968-1", "protein_name": "Peroxisomal membrane protein PEX13", "gene_name": "PEX13", "tax_name": "Human" }, { "uniprot_canonical_ac": "O00623-1", "protein_name": "Peroxisome assembly protein 12", "gene_name": "PEX12", "tax_name": "Human" }, { "uniprot_canonical_ac": "P56589-1", "protein_name": "Peroxisomal biogenesis factor 3", "gene_name": "PEX3", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y6I8-1", "protein_name": "Peroxisomal membrane protein 4", "gene_name": "PXMP4", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9UBJ2-1", "protein_name": "ATP-binding cassette sub-family D member 2", "gene_name": "ABCD2", "tax_name": "Human" }, { "uniprot_canonical_ac": "P33897-1", "protein_name": "ATP-binding cassette sub-family D member 1", "gene_name": "ABCD1", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28288-1", "protein_name": "ATP-binding cassette sub-family D member 3", "gene_name": "ABCD3", "tax_name": "Human" }, { "uniprot_canonical_ac": "P40855-1", "protein_name": "Peroxisomal biogenesis factor 19", "gene_name": "PEX19", "tax_name": "Human" } ], "species": [ { "name": "Homo sapiens", "taxid": 9606, "evidence": [ { "database": "UniProtKB", "id": "O75381", "url": "https://www.uniprot.org/uniprotkb/O75381" } ], "common_name": "Human", "glygen_name": "Human", "reference_species": "Homo sapiens [9606]" } ], "mutagenesis": [ { "start_pos": 29, "end_pos": 29, "sequence_org": "F", "sequence_mut": "A", "comment": "Abolishes binding to PEX3.", "evidence": [ { "database": "UniProtKB", "id": "P40855", "url": "https://www.uniprot.org/uniprotkb/P40855" }, { "database": "PubMed", "id": "20554521", "url": "https://pubmed.ncbi.nlm.nih.gov/20554521" } ], "uniprot_canonical_ac": "P40855-1" } ], "record_id": "pubmed.20554521", "abstract": "", "glycosylation": [], "snv": [], "phosphorylation": [], "glycation": [], "section_stats": [ { "table_id": "referenced_proteins", "table_stats": [ { "field": "total", "count": 19 } ], "sort_fields": [ "uniprot_canonical_ac", "protein_name", "gene_name", "tax_name" ] }, { "table_id": "referenced_glycans", "table_stats": [ { "field": "total", "count": 0 } ], "sort_fields": [] }, { "table_id": "glycosylation", "table_stats": [ { "field": "total", "count": 0 }, { "field": "total_sites", "count": 0 }, { "field": "n_linked_sites", "count": 0 }, { "field": "o_linked_sites", "count": 0 }, { "field": "n_linked_glycan_sites", "count": 0 }, { "field": "o_linked_glycan_sites", "count": 0 }, { "field": "n_linked_glycans", "count": 0 }, { 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"Structural basis for docking of peroxisomal membrane protein carrier Pex19p onto its receptor Pex3p.", "journal": "The EMBO journal", "date": "2010", "authors": "Sato Y, Shibata H, Nakatsu T, Nakano H, Kashiwayama Y, Imanaka T, Kato H", "reference": { "type": "PubMed", "id": "21102411", "url": "https://pubmed.ncbi.nlm.nih.gov/21102411" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3D6-1", "protein_name": "Mitochondrial fission 1 protein", "gene_name": "FIS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43808-1", "protein_name": "Peroxisomal membrane protein PMP34", "gene_name": "SLC25A17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": 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PEX19-dependent and TRC40-independent class I pathway.", "journal": "The Journal of cell biology", "date": "2013", "authors": "Yagita Y, Hiromasa T, Fujiki Y", "reference": { "type": "PubMed", "id": "23460677", "url": "https://pubmed.ncbi.nlm.nih.gov/23460677" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3D6-1", "protein_name": "Mitochondrial fission 1 protein", "gene_name": "FIS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43808-1", "protein_name": "Peroxisomal membrane protein PMP34", "gene_name": "SLC25A17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", "protein_name": "Peroxisomal membrane protein 2", "gene_name": "PXMP2", "tax_name": "Human" }, { 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[] } ] }, { "title": "Charcot-Marie-Tooth disease-associated mutants of GDAP1 dissociate its roles in peroxisomal and mitochondrial fission.", "journal": "EMBO reports", "date": "2013", "authors": "Huber N, Guimaraes S, Schrader M, Suter U, Niemann A", "reference": { "type": "PubMed", "id": "23628762", "url": "https://pubmed.ncbi.nlm.nih.gov/23628762" }, "referenced_glycans": [], "referenced_proteins": [ { "uniprot_canonical_ac": "O75381-1", "protein_name": "Peroxisomal membrane protein PEX14", "gene_name": "PEX14", "tax_name": "Human" }, { "uniprot_canonical_ac": "P28328-1", "protein_name": "Peroxisome biogenesis factor 2", "gene_name": "PEX2", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9Y3D6-1", "protein_name": "Mitochondrial fission 1 protein", "gene_name": "FIS1", "tax_name": "Human" }, { "uniprot_canonical_ac": "O43808-1", "protein_name": "Peroxisomal membrane protein PMP34", "gene_name": "SLC25A17", "tax_name": "Human" }, { "uniprot_canonical_ac": "Q9NR77-1", 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