[ { "uniprot_canonical_ac": "Q1LWJ6-1", "uniprot_id": [ { "id": "ARPIN_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWJ6", "type": "external" } ], "mass": 25622.0, "length": 226, "protein_name": "Arpin", "gene_name": "arpin", "organism": "Zebrafish", "refseq_name": "arpin", "refseq_ac": [ { "id": "NP_001017780", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017780", "type": "external" } ], "gene_names_uniprotkb": "arpin; zgc:112432", "gene_names_refseq": "arpin; si:ch211-200o3.3; zgc:112432", "protein_names_uniprotkb": "Arpin", "protein_names_refseq": "arpin", "tax_id": 7955, "disease": "", "pathway": " (dre:550477)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "23594743;24132237;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093306.1, EH546085.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093306.1., [RefSeq]; Regulates actin polymerization by inhibiting the actin-nucleating activity of the Arp2/3 complex; the function is competitive with nucleation promoting factors (By similarity). Involved in steering cell migration by controlling its directional persistence., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q561T7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0030027 lamellipodium", "go_biological_process": "GO:0030336 negative regulation of cell migration;GO:0033058 directional locomotion;GO:0051126 negative regulation of actin nucleation", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1LWJ6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWJ7-1", "uniprot_id": [ { "id": "Q1LWJ7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWJ7", "type": "external" } ], "mass": 108519.0, "length": 946, "protein_name": "Aminopeptidase", "gene_name": "anpeplb", "organism": "Zebrafish", "refseq_name": "alanyl (membrane) aminopeptidase-like b", "refseq_ac": [ { "id": "NP_001038326", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038326", "type": "external" } ], "gene_names_uniprotkb": "anpeplb; anpepa; fd60b03; si:ch211-200o3.4; wu:fd60b03", "gene_names_refseq": "anpepa; anpeplb; fd60b03; si:ch211-200o3.4; wu:fd60b03", "protein_names_uniprotkb": "Aminopeptidase; 3.4.11.-", "protein_names_refseq": "alanyl (membrane) aminopeptidase a; alanyl (membrane) aminopeptidase-like b; aminopeptidase N", "tax_id": 7955, "disease": "severe acute respiratory syndrome (Disease Ontology:DOID:2945)", "pathway": " (dre:558452)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;33757938", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588730.14309481.1, SRR32588726.6224738.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Sep 1, 2006 this sequence version replaced XP_686757.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9G7;A0AC58HTH0;A0AC58HTH5;A0AC58HTH6;A0AC58HTJ3", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0070006 metalloaminopeptidase activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005886 plasma membrane", "go_biological_process": "GO:0006508 proteolysis;GO:0043171 peptide catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q1LWJ7-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWL2-1", "uniprot_id": [ { "id": "DS22A_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWL2", "type": "external" } ], "mass": 23386.0, "length": 208, "protein_name": "Dual specificity protein phosphatase 22-A", "gene_name": "dusp22a", "organism": "Zebrafish", "refseq_name": "dual specificity protein phosphatase 22-A", "refseq_ac": [ { "id": "NP_001002514", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001002514", "type": "external" } ], "gene_names_uniprotkb": "dusp22a; dusp22; si:dkey-190g1.1; zgc:92816", "gene_names_refseq": "dusp22a; dusp22; wu:fa11e09; zgc:92816", "protein_names_uniprotkb": "Dual specificity protein phosphatase 22-A; 3.1.3.16; 3.1.3.48", "protein_names_refseq": "dual specificity protein phosphatase 22-A", "tax_id": 7955, "disease": "", "pathway": " (dre:436787)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC076284.1, EV755057.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC076284.1., [RefSeq]; Activates the Jnk signaling pathway. Dephosphorylates and deactivates p38 and stress-activated protein kinase/c-Jun N-terminal kinase (SAPK/JNK) (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6DGQ6", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.21", "type": "external" } ], "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:1990782 protein tyrosine kinase binding;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0007165 signal transduction;GO:0030155 regulation of cell adhesion;GO:0071363 cellular response to growth factor stimulus;GO:0050860 negative regulation of T cell receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LWL2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWR1-1", "uniprot_id": [ { "id": "Q1LWR1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWR1", "type": "external" } ], "mass": 13338.0, "length": 118, "protein_name": "DNA-directed RNA polymerase subunit", "gene_name": "polr1h", "organism": "Zebrafish", "refseq_name": "DNA-directed RNA polymerase I subunit RPA12 isoform X1", "refseq_ac": [ { "id": "XP_005170088", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170088", "type": "external" } ], "gene_names_uniprotkb": "polr1h; zgc:110825; znrd1", "gene_names_refseq": "polr1h; zgc:110825; znrd1", "protein_names_uniprotkb": "DNA-directed RNA polymerase subunit", "protein_names_refseq": "DNA-directed RNA polymerase I subunit RPA12 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:541428); (R-DRE-5250924); (R-DRE-73762); (R-DRE-73772); (R-DRE-73863)", "pathway_count": 5, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Core component of RNA polymerase I (Pol I), a DNA-dependent RNA polymerase which synthesizes ribosomal RNA precursors using the four ribonucleoside triphosphates as substrates. Can mediate Pol I proofreading of the nascent RNA transcript. Anchors into the Pol I active site to monitor transcription fidelity and cleave mis-incorporated 5'-ribonucleotides., [UniProtKB, UniProtKB]; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3KQ05", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0003899 DNA-directed RNA polymerase activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005736 RNA polymerase I complex", "go_biological_process": "GO:0006363 termination of RNA polymerase I transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1LWR1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWV7-1", "uniprot_id": [ { "id": "MEAK7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWV7", "type": "external" } ], "mass": 49949.0, "length": 450, "protein_name": "MTOR-associated protein MEAK7", "gene_name": "meak7", "organism": "Zebrafish", "refseq_name": "MTOR-associated protein MEAK7", "refseq_ac": [ { "id": "NP_001038430", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038430", "type": "external" } ], "gene_names_uniprotkb": "meak7; KIAA1609; fj85b03; plcg2; sb:eu1064; si:ch211-260p9.2; si:ch211-260p9.6; tldc1; wu:fj85b03; zgc:152893; zgc:153621", "gene_names_refseq": "meak7; si:ch211-260p9.6; tldc1; zgc:153621", "protein_names_uniprotkb": "MTOR-associated protein MEAK7; MEAK7; TBC/LysM-associated domain-containing protein 1; TLD domain-containing protein 1", "protein_names_refseq": "MTOR-associated protein MEAK7; TBC/LysM-associated domain containing 1; TBC/LysM-associated domain-containing protein 1; TLD domain-containing protein 1", "tax_id": 7955, "disease": "autoinflammation, antibody deficiency, and immune dysregulation syndrome (Disease Ontology:DOID:0070615); familial cold autoinflammatory syndrome 3 (Disease Ontology:DOID:0090064)", "pathway": " (dre:561678); (dre:561747)", "pathway_count": 2, "publication_count": 7, "publication_id_list": "15520368;21909574;23594743;26469318;27499523;29896183;32959503", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC125880.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC125880.1. On Nov 8, 2006 this sequence version replaced NP_001038430.1., [RefSeq]; Activates an alternative mTOR signaling pathway to regulate cell proliferation and migration (By similarity). Binds to the vacuolar-type ATPase (V-ATPase) complex, triggering a conformational change and is likely to regulate its activity (By similarity)., [UniProtKB, UniProtKB]; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades., [UniProtKB, UniProtKB]; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. It is a crucial enzyme in transmembrane signaling., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0JMH4", "ec_number_list": [ { "id": "3.1.4.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.11", "type": "external" } ], "go_molecular_function": "GO:0004435 phosphatidylinositol-4,5-bisphosphate phospholipase C activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016020 membrane;GO:0005765 lysosomal membrane;GO:0045121 membrane raft", "go_biological_process": "GO:0006979 response to oxidative stress;GO:0042127 regulation of cell population proliferation;GO:0031667 response to nutrient levels;GO:0032868 response to insulin;GO:0030334 regulation of cell migration", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1LWV7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LWX3-1", "uniprot_id": [ { "id": "NTAQ1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LWX3", "type": "external" } ], "mass": 23546.0, "length": 202, "protein_name": "Protein N-terminal glutamine amidohydrolase", "gene_name": "ntaq1", "organism": "Zebrafish", "refseq_name": "protein N-terminal glutamine amidohydrolase", "refseq_ac": [ { "id": "NP_001038412", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038412", "type": "external" } ], "gene_names_uniprotkb": "ntaq1; si:rp71-45k5.3; wdyhv1", "gene_names_refseq": "ntaq1; si:rp71-45k5.3; wdyhv1", "protein_names_uniprotkb": "Protein N-terminal glutamine amidohydrolase; 3.5.1.122; N-terminal Gln amidase; Nt(Q)-amidase; Protein NH2-terminal glutamine deamidase; WDYHV motif-containing protein 1", "protein_names_refseq": "N-terminal Gln amidase; WDYHV motif containing 1; WDYHV motif-containing protein 1; nt(Q)-amidase; protein N-terminal glutamine amidohydrolase; protein NH2-terminal glutamine deamidase", "tax_id": 7955, "disease": "", "pathway": " (dre:560935)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01024165.1, BC171472.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505374, SAMEA3505382 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_689427.1., [RefSeq]; Mediates the side-chain deamidation of N-terminal glutamine residues to glutamate, an important step in N-end rule pathway of protein degradation. Conversion of the resulting N-terminal glutamine to glutamate renders the protein susceptible to arginylation, polyubiquitination and degradation as specified by the N-end rule. Does not act on substrates with internal or C-terminal glutamine and does not act on non-glutamine residues in any position. Does not deaminate acetylated N-terminal glutamine. With the exception of proline, all tested second-position residues on substrate peptides do not greatly influence the activity. In contrast, a proline at position 2, virtually abolishes deamidation of N-terminal glutamine., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B7ZV64;Q0P423", "ec_number_list": [ { "id": "3.5.1.122", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.122", "type": "external" } ], "go_molecular_function": "GO:0008418 protein-N-terminal asparagine amidohydrolase activity;GO:0070773 protein-N-terminal glutamine amidohydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0036211 protein modification process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LWX3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LX29-1", "uniprot_id": [ { "id": "TERB1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LX29", "type": "external" } ], "mass": 92807.0, "length": 814, "protein_name": "Telomere repeats-binding bouquet formation protein 1", "gene_name": "ccdc79", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ccdc79; si:dkey-238c7.7; si:dkey-30c15.5; terb1", "gene_names_refseq": "", "protein_names_uniprotkb": "Telomere repeats-binding bouquet formation protein 1; Coiled-coil domain-containing protein 79", "protein_names_refseq": "", "tax_id": 7955, "disease": "spermatogenic failure 60 (Disease Ontology:DOID:0112355)", "pathway": " (dre:559140)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "Meiosis-specific telomere-associated protein involved in meiotic telomere attachment to the nucleus inner membrane, a crucial step for homologous pairing and synapsis. Component of the MAJIN-TERB1-TERB2 complex, which promotes telomere cap exchange by mediating attachment of telomeric DNA to the inner nuclear membrane and replacement of the protective cap of telomeric chromosomes: in early meiosis, the MAJIN-TERB1-TERB2 complex associates with telomeric DNA and the shelterin/telosome complex. During prophase, the complex matures and promotes release of the shelterin/telosome complex from telomeric DNA. In the MAJIN-TERB1-TERB2 complex, TERB1 probably mediates association with the shelterin/telosome complex., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3KQ98", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005637 nuclear inner membrane;GO:0000781 chromosome, telomeric region", "go_biological_process": "GO:0070197 meiotic attachment of telomere to nuclear envelope;GO:0007129 homologous chromosome pairing at meiosis;GO:0045141 meiotic telomere clustering", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LX29-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LX46-1", "uniprot_id": [ { "id": "Q1LX46_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LX46", "type": "external" } ], "mass": 111233.0, "length": 1012, "protein_name": "Solute carrier family 12 member 3", "gene_name": "slc12a3", "organism": "Zebrafish", "refseq_name": "solute carrier family 12 member 3", "refseq_ac": [ { "id": "NP_001038545", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038545", "type": "external" } ], "gene_names_uniprotkb": "slc12a3; si:ch211-122c9.4; wu:fj83c03", "gene_names_refseq": "si:ch211-122c9.4; slc12a3; wu:fj83c03", "protein_names_uniprotkb": "Solute carrier family 12 member 3; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter", "protein_names_refseq": "NCCT; solute carrier family 12 (sodium/chloride transporter), member 3; solute carrier family 12 (sodium/chloride transporters), member 3; solute carrier family 12 member 3", "tax_id": 7955, "disease": "Gitelman syndrome (Disease Ontology:DOID:0050450); essential hypertension (Disease Ontology:DOID:10825)", "pathway": " (dre:565439); (R-DRE-426117)", "pathway_count": 2, "publication_count": 10, "publication_id_list": "15520368;17953490;18391953;19279294;19855023;36551976;36831333;37232416;37898820;38727814", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01038218.1, GDQQ01013683.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505374 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On or before Sep 1, 2006 this sequence version replaced XP_690226.1, XP_709400.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Electroneutral sodium and chloride ion cotransporter, which acts as a key mediator of sodium and chloride reabsorption in kidney distal convoluted tubules. Also acts as a receptor for the pro-inflammatory cytokine IL18, thereby contributing to IL18-induced cytokine production, including IFNG, IL6, IL18 and CCL2. May act either independently of IL18R1, or in a complex with IL18R1., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9Z5", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008511 sodium:potassium:chloride symporter activity", "go_cellular_component": "GO:0016324 apical plasma membrane", "go_biological_process": "GO:0006884 cell volume homeostasis;GO:1902476 chloride transmembrane transport;GO:0035725 sodium ion transmembrane transport;GO:0035844 cloaca development;GO:0039023 pronephric duct morphogenesis", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LX46-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LX59-1", "uniprot_id": [ { "id": "C2512_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LX59", "type": "external" } ], "mass": 32063.0, "length": 276, "protein_name": "Cholesterol 25-hydroxylase-like protein 1, member 2", "gene_name": "ch25hl1.2", "organism": "Zebrafish", "refseq_name": "cholesterol 25-hydroxylase-like protein 1, member 2", "refseq_ac": [ { "id": "NP_001076393", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076393", "type": "external" } ], "gene_names_uniprotkb": "ch25hl1.2; si:dkey-24l11.9", "gene_names_refseq": "ch25hc.2; ch25hl1.2; si:dkey-24l11.9", "protein_names_uniprotkb": "Cholesterol 25-hydroxylase-like protein 1, member 2; 1.14.99.-", "protein_names_refseq": "cholesterol 25-hydroxylase like 1, member 2; cholesterol 25-hydroxylase-like protein 1, member 2", "tax_id": 7955, "disease": "", "pathway": " (dre:798384)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript is intronless :: MF095416.1, SRR32588730.27506798.1 [ECO:0000345] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On Mar 15, 2007 this sequence version replaced XP_001338836.1., [RefSeq]; May catalyze the formation of 25-hydroxycholesterol from cholesterol., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 2, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000254 C-4 methylsterol oxidase activity;GO:0005506 iron ion binding;GO:0008395 steroid hydroxylase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0008203 cholesterol metabolic process;GO:0016126 sterol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LX59-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LX72-1", "uniprot_id": [ { "id": "Q1LX72_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LX72", "type": "external" } ], "mass": 122137.0, "length": 1073, "protein_name": "Synemin", "gene_name": "synm", "organism": "Zebrafish", "refseq_name": "synemin", "refseq_ac": [ { "id": "NP_001038340", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038340", "type": "external" } ], "gene_names_uniprotkb": "synm; dmn; si:dkey-25f3.3", "gene_names_refseq": "dmn; si:dkey-25f3.3; synm", "protein_names_uniprotkb": "Synemin", "protein_names_refseq": "desmuslin; synemin", "tax_id": 7955, "disease": "", "pathway": " (dre:558800)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "19478994;26156497;27189481;28252024;33019757;34991727;35134499", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC171396.1, GDQH01002934.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476749, SAMEA4476796 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000018.1. On or before Oct 24, 2015 this sequence version replaced XP_005159213.1, XP_687158.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9E7", "ec_number_list": [], "go_molecular_function": "GO:0005200 structural constituent of cytoskeleton;GO:0008307 structural constituent of muscle;GO:0017166 vinculin binding;GO:0019215 intermediate filament binding", "go_cellular_component": "GO:0005882 intermediate filament;GO:0042383 sarcolemma;GO:0043034 costamere;GO:0060053 neurofilament cytoskeleton", "go_biological_process": "GO:0045104 intermediate filament cytoskeleton organization;GO:0031443 fast-twitch skeletal muscle fiber contraction", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q1LX72-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXA2-1", "uniprot_id": [ { "id": "Q1LXA2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXA2", "type": "external" } ], "mass": 10458.0, "length": 92, "protein_name": "Dolichol-phosphate mannosyltransferase subunit 3", "gene_name": "dpm3", "organism": "Zebrafish", "refseq_name": "dolichol-phosphate mannosyltransferase subunit 3", "refseq_ac": [ { "id": "NP_957103", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_957103", "type": "external" } ], "gene_names_uniprotkb": "dpm3; zgc:73376", "gene_names_refseq": "dpm3; zgc:73376", "protein_names_uniprotkb": "Dolichol-phosphate mannosyltransferase subunit 3", "protein_names_refseq": "dolichol-phosphate mannosyltransferase subunit 3; dolichyl-phosphate mannosyltransferase polypeptide 3", "tax_id": 7955, "disease": "congenital disorder of glycosylation type I (Disease Ontology:DOID:0050570); muscular dystrophy-dystroglycanopathy type B15 (Disease Ontology:DOID:0112376)", "pathway": " (dre:393782); (R-DRE-162699)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "26469318;26912795;27291147;38139043", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CN022970.1, GFIL01008939.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505380, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On or before Mar 12, 2008 this sequence version replaced XP_001341026.1, NP_957103.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Stabilizer subunit of the dolichol-phosphate mannose (DPM) synthase complex; tethers catalytic subunit to the ER., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1PF26", "ec_number_list": [], "go_molecular_function": "GO:0016757 glycosyltransferase activity", "go_cellular_component": "GO:0033185 dolichol-phosphate-mannose synthase complex;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0061061 muscle structure development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LXA2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXB2-1", "uniprot_id": [ { "id": "Q1LXB2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXB2", "type": "external" } ], "mass": 27889.0, "length": 261, "protein_name": "Protein shisa-5", "gene_name": "shisa10.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC558619 precursor", "refseq_ac": [ { "id": "NP_001038335", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038335", "type": "external" } ], "gene_names_uniprotkb": "shisa10.1; fk47a03; si:dkey-42i9.6; wu:fk47a03; zgc:153224", "gene_names_refseq": "fk47a03; shisa10.1; shisa5; si:dkey-42i9.6; wu:fk47a03; zgc:153224", "protein_names_uniprotkb": "Protein shisa-5; Scotin", "protein_names_refseq": "uncharacterized protein LOC558619 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:558619); (R-DRE-381426); (R-DRE-8957275)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "15520368;26469318;27189481;28252024;37762365", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01009953.1, GDQQ01027245.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505373 [ECO:0006172] ##Evidence-Data-END## PREDICTED REFSEQ: This record has not been reviewed and the function is unknown. The reference sequence was derived from JBMGRA010000022.1. On Sep 1, 2006 this sequence version replaced XP_686940.1., [RefSeq]; Can induce apoptosis in a caspase-dependent manner and plays a role in p53/TP53-dependent apoptosis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9E4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031965 nuclear membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006915 apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1LXB2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXC9-1", "uniprot_id": [ { "id": "INT3_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXC9", "type": "external" } ], "mass": 116403.0, "length": 1017, "protein_name": "Integrator complex subunit 3", "gene_name": "ints3", "organism": "Zebrafish", "refseq_name": "integrator complex subunit 3", "refseq_ac": [ { "id": "NP_001038397", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038397", "type": "external" } ], "gene_names_uniprotkb": "ints3; si:dkey-27c15.2", "gene_names_refseq": "ints3; si:dkey-27c15.2", "protein_names_uniprotkb": "Integrator complex subunit 3; Int3; SOSS complex subunit A; SOSS-A; Sensor of single-strand DNA complex subunit A; Sensor of ssDNA subunit A", "protein_names_refseq": "SOSS complex subunit A; SOSS-A; int3; integrator complex subunit 3; sensor of single-strand DNA complex subunit A; sensor of ssDNA subunit A", "tax_id": 7955, "disease": "", "pathway": " (dre:560575); (R-DRE-6807505)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## RNAseq introns :: single sample supports all introns SAMEA3505393, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BX465837.11. On Sep 1, 2006 this sequence version replaced XP_689065.1., [RefSeq]; Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. The SOSS complex is required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs) and ATM-dependent signaling pathways. In the SOSS complex, it is required for the assembly of the complex and for stabilization of the complex at DNA damage sites., [UniProtKB, UniProtKB]; Component of the integrator complex, a multiprotein complex that terminates RNA polymerase II (Pol II) transcription in the promoter-proximal region of genes. The integrator complex provides a quality checkpoint during transcription elongation by driving premature transcription termination of transcripts that are unfavorably configured for transcriptional elongation: the complex terminates transcription by (1) catalyzing dephosphorylation of the C-terminal domain (CTD) of Pol II subunit POLR2A/RPB1 and SUPT5H/SPT5, (2) degrading the exiting nascent RNA transcript via endonuclease activity and (3) promoting the release of Pol II from bound DNA. The integrator complex is also involved in terminating the synthesis of non-coding Pol II transcripts, such as enhancer RNAs (eRNAs), small nuclear RNAs (snRNAs), telomerase RNAs and long non-coding RNAs (lncRNAs). Within the integrator complex, INTS3 is involved in the post-termination step: INTS3 binds INTS7 in the open conformation of integrator complex and prevents the rebinding of Pol II to the integrator after termination cycle., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q58EQ4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0032039 integrator complex;GO:0070876 SOSS complex;GO:0160232 INTAC complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006974 DNA damage response;GO:0010212 response to ionizing radiation;GO:0044818 mitotic G2/M transition checkpoint;GO:0160240 RNA polymerase II transcription initiation surveillance", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LXC9-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXK4-1", "uniprot_id": [ { "id": "M10B1_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXK4", "type": "external" } ], "mass": 116407.0, "length": 1013, "protein_name": "Probable RNA helicase mov-10-B.1", "gene_name": "mov10b.1", "organism": "Zebrafish", "refseq_name": "putative helicase mov-10-B.1", "refseq_ac": [ { "id": "NP_001037807", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001037807", "type": "external" } ], "gene_names_uniprotkb": "mov10b.1; fa99a10; mov10a; si:dkeyp-38g6.2; wu:fa99a10", "gene_names_refseq": "fa99a10; mov10a; mov10b.1; si:dkeyp-38g6.2; wu:fa99a10", "protein_names_uniprotkb": "Probable RNA helicase mov-10-B.1; 5.6.2.5; RNA 5'-3' helicase mov-10-B.1", "protein_names_refseq": "Moloney leukemia virus 10, homolog b, tandem duplicate 1; Moloney leukemia virus 10, homolog, b.1; Moloney leukemia virus 10b, tandem duplicate 1; putative helicase mov-10-A; putative helicase mov-10-B.1", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763)", "pathway": " (dre:556024)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC171375.1, GFIL01026657.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Mar 1, 2008 this sequence version replaced NP_001037807.1., [RefSeq]; Probable 5'-3' RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC (By similarity)., [UniProtKB]; Probable RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "4.2.99.18", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.18", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "7.6.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.2", "type": "external" }, { "id": "5.6.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.1.6", "type": "external" }, { "id": "7.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.3", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.15", "type": "external" }, { "id": "3.6.4.10", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.10", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0032574 5'-3' RNA helicase activity;GO:0004386 helicase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0000932 P-body;GO:0043186 P granule", "go_biological_process": "GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing;GO:0035279 miRNA-mediated gene silencing by mRNA destabilization", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1LXK4-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0100000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LXK5-1", "uniprot_id": [ { "id": "M10B2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LXK5", "type": "external" } ], "mass": 116510.0, "length": 1015, "protein_name": "Probable RNA helicase mov-10-B.2", "gene_name": "mov10b.2", "organism": "Zebrafish", "refseq_name": "putative helicase mov-10-B.2", "refseq_ac": [ { "id": "NP_001037805", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001037805", "type": "external" } ], "gene_names_uniprotkb": "mov10b.2; si:dkeyp-38g6.3", "gene_names_refseq": "mov10b.2; mov10b; si:dkeyp-38g6.3", "protein_names_uniprotkb": "Probable RNA helicase mov-10-B.2; 5.6.2.5; RNA 5'-3' helicase mov-10-B.2", "protein_names_refseq": "Moloney leukemia virus 10, homolog b, tandem duplicate 2; Moloney leukemia virus 10, homolog, b.2; Moloney leukemia virus 10b, tandem duplicate 2; putative helicase mov-10-B.2; putative helicase mov-10-B", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763)", "pathway": " (dre:555950)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01025713.1, SRR32588718.16707943.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN08196787 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Aug 25, 2006 this sequence version replaced XP_683705.1., [RefSeq]; Probable 5'-3' RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC (By similarity)., [UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0032574 5'-3' RNA helicase activity", "go_cellular_component": "GO:0005829 cytosol;GO:0000932 P-body;GO:0043186 P granule", "go_biological_process": "GO:0035194 regulatory ncRNA-mediated post-transcriptional gene silencing;GO:0035279 miRNA-mediated gene silencing by mRNA destabilization", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LXK5-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYE0-1", "uniprot_id": [ { "id": "Q1LYE0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYE0", "type": "external" } ], "mass": 69469.0, "length": 588, "protein_name": "Switch-associated protein 70", "gene_name": "swap70b", "organism": "Zebrafish", "refseq_name": "switch-associated protein 70b", "refseq_ac": [ { "id": "NP_001038451", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038451", "type": "external" } ], "gene_names_uniprotkb": "swap70b; fc45f07; si:dkey-8l13.4; swp70; wu:fc45f07", "gene_names_refseq": "fc45f07; si:dkey-8l13.4; swap70b; swp70; wu:fc45f07", "protein_names_uniprotkb": "Switch-associated protein 70", "protein_names_refseq": "SWAP switching B-cell complex 70b subunit 70b; SWAP switching B-cell complex subunit 70b; switch-associated protein 70b; switch-associated protein 70", "tax_id": 7955, "disease": "", "pathway": " (dre:562490); (R-DRE-9013149); (R-DRE-9013404); (R-DRE-9013423)", "pathway_count": 4, "publication_count": 6, "publication_id_list": "20549738;21875669;24177263;25266257;28252024;32106888", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01004329.1, GDQQ01016025.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505374, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000018.1. On or before Sep 1, 2006 this sequence version replaced XP_708074.1, XP_708075.1, XP_708076.1, XP_685700.1., [RefSeq]; Phosphatidylinositol 3,4,5-trisphosphate-dependent guanine nucleotide exchange factor (GEF) which, independently of RAS, transduces signals from tyrosine kinase receptors to RAC. It also mediates signaling of membrane ruffling. Regulates the actin cytoskeleton as an effector or adapter protein in response to agonist stimulated phosphatidylinositol (3,4)-bisphosphate production and cell protrusion., [UniProtKB, UniProtKB, UniProtKB]; Swap70b and Def6a delineate Wnt11 and Wnt5b signalling pathways and have roles in convergent and extension cell movement during zebrafish gastrulation, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9S3", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0030027 lamellipodium", "go_biological_process": "GO:0048714 positive regulation of oligodendrocyte differentiation;GO:0007096 regulation of exit from mitosis;GO:0060028 convergent extension involved in axis elongation;GO:0060026 convergent extension;GO:0060027 convergent extension involved in gastrulation", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q1LYE0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYG2-1", "uniprot_id": [ { "id": "Q1LYG2_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYG2", "type": "external" } ], "mass": 91020.0, "length": 817, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "braf", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase B-raf isoform 1", "refseq_ac": [ { "id": "NP_001311445", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001311445", "type": "external" } ], "gene_names_uniprotkb": "braf; sierrabraf", "gene_names_refseq": "braf; sierrabraf", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine protein kinase BRAF; serine/threonine-protein kinase B-raf isoform 1; v-raf murine sarcoma viral oncogene homolog B1", "tax_id": 7955, "disease": "colorectal adenocarcinoma (Disease Ontology:DOID:0050861); cardiofaciocutaneous syndrome (Disease Ontology:DOID:0060233); Noonan syndrome 7 (Disease Ontology:DOID:0060585); Noonan syndrome with multiple lentigines 3 (Disease Ontology:DOID:0080550); cardiofaciocutaneous syndrome 1 (Disease Ontology:DOID:0111460); lung cancer (Disease Ontology:DOID:1324); colon carcinoma (Disease Ontology:DOID:1520); pancreatic cancer (Disease Ontology:DOID:1793); melanoma (Disease Ontology:DOID:1909); prostate adenocarcinoma (Disease Ontology:DOID:2526); Langerhans-cell histiocytosis (Disease Ontology:DOID:2571); dysembryoplastic neuroepithelial tumor (Disease Ontology:DOID:2679); endometrial carcinoma (Disease Ontology:DOID:2871); malignant astrocytoma (Disease Ontology:DOID:3069); germinoma (Disease Ontology:DOID:3304); papillary thyroid carcinoma (Disease Ontology:DOID:3969); pleomorphic xanthoastrocytoma (Disease Ontology:DOID:4852); intrahepatic cholangiocarcinoma (Disease Ontology:DOID:4928); cholangiocarcinoma (Disease Ontology:DOID:4947); bile duct adenoma (Disease Ontology:DOID:5381); pancreatic acinar cell adenocarcinoma (Disease Ontology:DOID:5742); familial melanoma (Disease Ontology:DOID:6846); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:403065); (R-DRE-1295596); (R-DRE-170968); (R-DRE-5673000); (R-DRE-5674135); (R-DRE-5674499); (R-DRE-5675221)", "pathway_count": 7, "publication_count": 10, "publication_id_list": "15694309;19470611;19500364;21203559;21729876;26469318;28252024;28350298;32033529;34331013", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AB125105.2, GFIL01002496.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On May 12, 2016 this sequence version replaced XP_005164674.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; BRAF activation is sufficient for f-nevus formation, and is among the primary events in melanoma development., [RefSeq, PubMed]; BRAF alternative splicing is differentially regulated in vertebrates. Exon 9b is present in all vertebrates, including Danio rerio, but exon 8b is present only in eutherians. Publication Status: Online-Only, [RefSeq, PubMed]; Gene expression studies nominated TWIST2 as a key effector downstream of BRAF. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 23, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1P7T0", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004709 MAP kinase kinase kinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0000165 MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1LYG2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYG4-1", "uniprot_id": [ { "id": "CR3LB_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYG4", "type": "external" } ], "mass": 48332.0, "length": 428, "protein_name": "Cyclic AMP-responsive element-binding protein 3-like protein 3-B", "gene_name": "creb3l3a; creb3l3b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "creb3l3a; creb3l3b; creb3l3b; creb3l3; fc88h05; si:ch211-195b2; si:dkey-110c1.2; wu:fc88h05; zgc:112279", "gene_names_refseq": "", "protein_names_uniprotkb": "Cyclic AMP-responsive element-binding protein 3-like protein 3-B; cAMP-responsive element-binding protein 3-like protein 3-B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:553700); (R-DRE-8874211)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "Transcriptional activator. Binds the cAMP response element (CRE). Activates transcription through box-B element and CRE. Seems to function synergistically with atf6 (By similarity). Regulates FGF21 transcription (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q1LYG4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYK7-1", "uniprot_id": [ { "id": "Q1LYK7_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYK7", "type": "external" } ], "mass": 82103.0, "length": 733, "protein_name": "Macrophage-capping protein", "gene_name": "scin", "organism": "Zebrafish", "refseq_name": "scinderin", "refseq_ac": [ { "id": "NP_001038583", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038583", "type": "external" } ], "gene_names_uniprotkb": "scin; si:ch211-134n17.3", "gene_names_refseq": "scin; si:ch211-134n17.3", "protein_names_uniprotkb": "Macrophage-capping protein; Actin regulatory protein CAP-G; Adseverin; Scinderin", "protein_names_refseq": "scinderin", "tax_id": 7955, "disease": "", "pathway": " (dre:566764)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "17548429;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01034577.1, GDQQ01006088.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On Jun 25, 2025 this sequence version replaced NP_001038583.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9Y9", "ec_number_list": [], "go_molecular_function": "GO:0005546 phosphatidylinositol-4,5-bisphosphate binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005634 nucleus;GO:0015629 actin cytoskeleton;GO:0030027 lamellipodium;GO:0042470 melanosome;GO:0002102 podosome", "go_biological_process": "GO:0007417 central nervous system development;GO:0051016 barbed-end actin filament capping;GO:0008154 actin polymerization or depolymerization;GO:0051014 actin filament severing;GO:0030031 cell projection assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q1LYK7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1LYN0-1", "uniprot_id": [ { "id": "Q1LYN0_DANRE", "url": "https://www.uniprot.org/uniprot/Q1LYN0", "type": "external" } ], "mass": 16802.0, "length": 150, "protein_name": "NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial", "gene_name": "ndufb11", "organism": "Zebrafish", "refseq_name": "NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial", "refseq_ac": [ { "id": "NP_001038446", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038446", "type": "external" } ], "gene_names_uniprotkb": "ndufb11; im:6897973; si:dkey-6n6.4", "gene_names_refseq": "im:6897973; ndufb11; si:dkey-6n6.4", "protein_names_uniprotkb": "NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial; Complex I-ESSS; NADH-ubiquinone oxidoreductase ESSS subunit", "protein_names_refseq": "NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11; NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial", "tax_id": 7955, "disease": "linear skin defects with multiple congenital anomalies 3 (Disease Ontology:DOID:0111876); nuclear type mitochondrial complex I deficiency 30 (Disease Ontology:DOID:0112098)", "pathway": " (dre:562219); (R-DRE-611105); (R-DRE-6799198)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "25921236;26469318;28252024;31415728;38508476", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CK362340.1, GFIL01027971.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505376, SAMEA3505385 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000008.1. On Sep 1, 2006 this sequence version replaced XP_690709.1., [RefSeq]; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9R9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0045271 respiratory chain complex I", "go_biological_process": "GO:0007507 heart development;GO:0001944 vasculature development;GO:0022904 respiratory electron transport chain", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q1LYN0-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1MTC4-1", "uniprot_id": [ { "id": "Q1MTC4_DANRE", "url": "https://www.uniprot.org/uniprot/Q1MTC4", "type": "external" } ], "mass": 179897.0, "length": 1631, "protein_name": "Vitellogenin 2 precursor", "gene_name": "vtg2", "organism": "Zebrafish", "refseq_name": "vitellogenin 2 precursor", "refseq_ac": [ { "id": "NP_001038378", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038378", "type": "external" } ], "gene_names_uniprotkb": "vtg2; si:dkey-4c23.2; vg2; zfVtg2", "gene_names_refseq": "si:dkey-4c23.2; vg2; vtg2; zfVtg2", "protein_names_uniprotkb": "Vitellogenin 2 precursor", "protein_names_refseq": "vitellogenin 2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:559931)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "11054560;15979250;16631158;18060571;18499281;36708962;37713421;37914813;38660750;39470059", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC133137.1, GFIL01005683.1 [ECO:0000332] RNAseq introns :: partial sample support SAMEA3505373, SAMEA3505376 [ECO:0000350] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On Jun 17, 2025 this sequence version replaced NP_001038378.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Genomic disturbance of vitellogenin 2 (vtg2) leads to vitellin membrane deficiencies and significant mortalities at early stages of embryonic development in zebrafish (Danio rerio). Publication Status: Online-Only, [RefSeq, PubMed]; Precursor of the major egg-yolk proteins that are sources of nutrients during early development of oviparous organisms., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M1N9S5", "ec_number_list": [], "go_molecular_function": "GO:0005319 lipid transporter activity;GO:0001530 lipopolysaccharide binding;GO:0045735 nutrient reservoir activity;GO:0070891 lipoteichoic acid binding", "go_cellular_component": "", "go_biological_process": "GO:0032355 response to estradiol;GO:0060100 positive regulation of phagocytosis, engulfment;GO:0071391 cellular response to estrogen stimulus;GO:0030704 vitelline membrane formation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q1MTC4-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1MTD3-1", "uniprot_id": [ { "id": "MCES_DANRE", "url": "https://www.uniprot.org/uniprot/Q1MTD3", "type": "external" } ], "mass": 45961.0, "length": 400, "protein_name": "mRNA cap guanine-N(7) methyltransferase", "gene_name": "rnmt", "organism": "Zebrafish", "refseq_name": "mRNA cap guanine-N(7) methyltransferase", "refseq_ac": [ { "id": "NP_001038465", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038465", "type": "external" } ], "gene_names_uniprotkb": "rnmt; si:ch211-105d11.3", "gene_names_refseq": "fi09c12; im:6910566; rnmt; si:ch211-105d11.3; wu:fi09c12", "protein_names_uniprotkb": "mRNA cap guanine-N(7) methyltransferase; 2.1.1.56; RG7MT1; mRNA (guanine-N(7))-methyltransferase; mRNA cap methyltransferase", "protein_names_refseq": "RG7MT1; mRNA (guanine-N(7)-)-methyltransferase; mRNA cap guanine-N(7) methyltransferase; mRNA cap guanine-N7 methyltransferase; mRNA cap methyltransferase", "tax_id": 7955, "disease": "", "pathway": " (dre:562801); (R-DRE-72086); (R-DRE-77075)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01032940.1, GDQH01009296.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Sep 1, 2006 this sequence version replaced XP_691267.1., [RefSeq]; Catalytic subunit of the mRNA-capping methyltransferase RNMT:RAMAC complex that methylates the N7 position of the added guanosine to the 5'-cap structure of mRNAs. Binds RNA containing 5'-terminal GpppC., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.7.6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.6", "type": "external" }, { "id": "2.1.1.56", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.56", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0004482 mRNA 5'-cap (guanine-N7-)-methyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0160130 mRNA cap methyltransferase RNMT:RAMAC complex", "go_biological_process": "GO:0006370 7-methylguanosine mRNA capping", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q1MTD3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1RLT2-1", "uniprot_id": [ { "id": "SPTSB_DANRE", "url": "https://www.uniprot.org/uniprot/Q1RLT2", "type": "external" } ], "mass": 9477.0, "length": 80, "protein_name": "Serine palmitoyltransferase small subunit B", "gene_name": "sptssb", "organism": "Zebrafish", "refseq_name": "serine palmitoyltransferase small subunit B", "refseq_ac": [ { "id": "NP_001153305", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001153305", "type": "external" } ], "gene_names_uniprotkb": "sptssb; admp; sssptb; zgc:136867", "gene_names_refseq": "ADMP; sptssb; ssSPTb; zgc:136867", "protein_names_uniprotkb": "Serine palmitoyltransferase small subunit B; Protein ADMP; Small subunit of serine palmitoyltransferase B; ssSPTb", "protein_names_refseq": "serine palmitoyltransferase small subunit B; small subunit of serine palmitoyltransferase B", "tax_id": 7955, "disease": "", "pathway": " (dre:678546); (R-DRE-1660661)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115298.1, CN513414.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476805 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from BC115298.1. On or before May 8, 2009 this sequence version replaced XP_709627.1, XP_691968.1. Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein., [RefSeq]; Component of the serine palmitoyltransferase multisubunit enzyme (SPT) that catalyzes the initial and rate-limiting step in sphingolipid biosynthesis by condensing L-serine and activated acyl-CoA (most commonly palmitoyl-CoA) to form long-chain bases. The SPT complex is composed of SPTLC1, SPTLC2 or SPTLC3 and SPTSSA or SPTSSB. Within this complex, the heterodimer consisting of SPTLC1 and SPTLC2/SPTLC3 forms the catalytic core. Within the SPT complex, SPTSSB stimulates the catalytic activity and plays a role in substrate specificity. SPT complexes with this subunit showing a preference for longer acyl-CoAs. The SPTLC1-SPTLC2-SPTSSB complex shows a strong preference for C18-CoA substrate, while the SPTLC1-SPTLC3-SPTSSB isozyme displays an ability to use a broader range of acyl-CoAs, without apparent preference., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0017059 serine palmitoyltransferase complex;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0046513 ceramide biosynthetic process;GO:0030148 sphingolipid biosynthetic process;GO:0007029 endoplasmic reticulum organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1RLT2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q1RM35-1", "uniprot_id": [ { "id": "CFA36_DANRE", "url": "https://www.uniprot.org/uniprot/Q1RM35", "type": "external" } ], "mass": 39410.0, "length": 350, "protein_name": "Cilia- and flagella-associated protein 36", "gene_name": "cfap36", "organism": "Zebrafish", "refseq_name": "cilia- and flagella-associated protein 36", "refseq_ac": [ { "id": "NP_001035412", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001035412", "type": "external" } ], "gene_names_uniprotkb": "cfap36; ccdc104; zgc:136497", "gene_names_refseq": "ccdc104; cfap36; zgc:136497", "protein_names_uniprotkb": "Cilia- and flagella-associated protein 36; Coiled-coil domain-containing protein 104", "protein_names_refseq": "cilia- and flagella-associated protein 36; coiled-coil domain containing 104; coiled-coil domain-containing protein 104", "tax_id": 7955, "disease": "", "pathway": " (dre:678564)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC115155.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC115155.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q502G1;Q6NWC2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0031514 motile cilium;GO:0005930 axoneme;GO:0097546 ciliary base", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q1RM35-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q25C93-1", "uniprot_id": [ { "id": "FEZF1_DANRE", "url": "https://www.uniprot.org/uniprot/Q25C93", "type": "external" } ], "mass": 47395.0, "length": 429, "protein_name": "Fez family zinc finger protein 1", "gene_name": "fezf1", "organism": "Zebrafish", "refseq_name": "fez family zinc finger protein 1", "refseq_ac": [ { "id": "NP_001107820", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001107820", "type": "external" } ], "gene_names_uniprotkb": "fezf1; fezf2; fez; wu:fc29c05; wu:fc89h05; zgc:153730", "gene_names_refseq": "fezf1; fezf2; fez; wu:fc29c05; wu:fc89h05; zgc:153730", "protein_names_uniprotkb": "Fez family zinc finger protein 1", "protein_names_refseq": "FEZ family zinc finger 2; fez family zinc finger protein 1", "tax_id": 7955, "disease": "hypogonadotropic hypogonadism 22 with or without anosmia (Disease Ontology:DOID:0090081)", "pathway": " (dre:558801)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "16540508", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AB207804.1, BC124439.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB207804.1. On Feb 8, 2008 this sequence version replaced XP_687159.2., [RefSeq]; Transcription repressor. Involved in the development of the forebrain region (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007399 nervous system development;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q25C93-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q29RB4-1", "uniprot_id": [ { "id": "OLF3A_DANRE", "url": "https://www.uniprot.org/uniprot/Q29RB4", "type": "external" } ], "mass": 44506.0, "length": 390, "protein_name": "Olfactomedin-like protein 3A", "gene_name": "olfml3a", "organism": "Zebrafish", "refseq_name": "olfactomedin-like protein 3A precursor", "refseq_ac": [ { "id": "NP_001070719", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001070719", "type": "external" } ], "gene_names_uniprotkb": "olfml3a; olfml3; zgc:153815", "gene_names_refseq": "olfml3a; olfml3b; olfml3; wu:faa48g10; wu:fb02c05; wu:fl19d05; zgc:153815", "protein_names_uniprotkb": "Olfactomedin-like protein 3A", "protein_names_refseq": "olfactomedin-like 3; olfactomedin-like protein 3A precursor; olfactomedin-like protein 3A", "tax_id": 7955, "disease": "", "pathway": " (dre:562022)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124742.1, EE687385.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505384 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC124742.1. On Oct 18, 2006 this sequence version replaced XP_690507.1., [RefSeq]; Secreted scaffold protein that plays an essential role in dorsoventral patterning during early development. Stabilizes axial formation by restricting chordin (CHRD) activity on the dorsal side. Acts by facilitating the association between the tolloid proteases and their substrate chordin (CHRD), leading to enhance chordin (CHRD) degradation (By similarity)., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "Q08BF8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q29RB4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2EY13-1", "uniprot_id": [ { "id": "PRTGB_DANRE", "url": "https://www.uniprot.org/uniprot/Q2EY13", "type": "external" } ], "mass": 117548.0, "length": 1069, "protein_name": "Protogenin B", "gene_name": "prtgb", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "prtgb", "gene_names_refseq": "", "protein_names_uniprotkb": "Protogenin B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "16881056", "class_list": "", "function": "May play a role in anteroposterior axis elongation., [UniProtKB, PubMed, UniProtKB, UniProtKB]", "predicted_glycosites": 12, "predicted_n_glycosites": 12, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 12, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0098609 cell-cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q2EY13-1", "record_type": "protein", "filter_code": "0000000.0000100.010000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2TLY2-1", "uniprot_id": [ { "id": "MACO1_DANRE", "url": "https://www.uniprot.org/uniprot/Q2TLY2", "type": "external" } ], "mass": 76082.0, "length": 664, "protein_name": "Macoilin-1", "gene_name": "Maco1a", "organism": "Zebrafish", "refseq_name": "macoilin-1", "refseq_ac": [ { "id": "NP_956613", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_956613", "type": "external" } ], "gene_names_uniprotkb": "Maco1a; si:dkey-264p5.3; tmem57a", "gene_names_refseq": "maco1a; macoilin-1; tmem57a; tmem57; zgc:56620", "protein_names_uniprotkb": "Macoilin-1; Transmembrane protein 57a", "protein_names_refseq": "macoilin-1; transmembrane protein 57a; transmembrane protein 57", "tax_id": 7955, "disease": "", "pathway": " (dre:393289); (R-DRE-8980692)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY845029.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY845029.1. On Sep 19, 2008 this sequence version replaced NP_956613.1., [RefSeq]; May play a role in the regulation of neuronal activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 5, "predicted_n_glycosites": 5, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "Q1L869;Q2TLY0", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0031965 nuclear membrane;GO:0030867 rough endoplasmic reticulum membrane", "go_biological_process": "GO:0023041 neuronal signal transduction;GO:0006935 chemotaxis", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q2TLY2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2YDP8-1", "uniprot_id": [ { "id": "THNS2_DANRE", "url": "https://www.uniprot.org/uniprot/Q2YDP8", "type": "external" } ], "mass": 53081.0, "length": 476, "protein_name": "Threonine synthase-like 2", "gene_name": "thnsl2", "organism": "Zebrafish", "refseq_name": "threonine synthase-like 2", "refseq_ac": [ { "id": "NP_001032655", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032655", "type": "external" } ], "gene_names_uniprotkb": "thnsl2; zgc:123281", "gene_names_refseq": "thnsl2; zgc:123281", "protein_names_uniprotkb": "Threonine synthase-like 2; 4.2.3.-; TSH2", "protein_names_refseq": "TSH2; threonine synthase-like 2", "tax_id": 7955, "disease": "", "pathway": " (dre:641568)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC110121.1, SRR32588731.2498452.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Aug 15, 2023 this sequence version replaced NP_001032655.1., [RefSeq]; Acts as a catabolic phospho-lyase on both gamma- and beta-phosphorylated substrates. Degrades O-phospho-threonine (PThr) to alpha-ketobutyrate, ammonia and phosphate (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding;GO:0016829 lyase activity", "go_cellular_component": "", "go_biological_process": "GO:0007420 brain development;GO:0008345 larval locomotory behavior", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q2YDP8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2YDS5-1", "uniprot_id": [ { "id": "SCNM1_DANRE", "url": "https://www.uniprot.org/uniprot/Q2YDS5", "type": "external" } ], "mass": 28752.0, "length": 249, "protein_name": "Sodium channel modifier 1", "gene_name": "scnm1", "organism": "Zebrafish", "refseq_name": "sodium channel modifier 1", "refseq_ac": [ { "id": "NP_001001813", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001001813", "type": "external" } ], "gene_names_uniprotkb": "scnm1; zgc:123015", "gene_names_refseq": "fb30c06; scnm1; wu:fb30c06; zgc:123015", "protein_names_uniprotkb": "Sodium channel modifier 1", "protein_names_refseq": "sodium channel modifier 1", "tax_id": 7955, "disease": "orofaciodigital syndrome XIX (Disease Ontology:DOID:0060960)", "pathway": " (dre:321696)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15520368", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY398412.1, CN016344.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY398412.1. On Jul 6, 2005 this sequence version replaced XP_683162.1., [RefSeq]; As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5BJD3;Q6TGU4", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0008380 RNA splicing;GO:0000380 alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q2YDS5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q2Z1R2-1", "uniprot_id": [ { "id": "SOX1B_DANRE", "url": "https://www.uniprot.org/uniprot/Q2Z1R2", "type": "external" } ], "mass": 36438.0, "length": 340, "protein_name": "Transcription factor Sox-1b", "gene_name": "sox1b", "organism": "Zebrafish", "refseq_name": "transcription factor Sox-1b", "refseq_ac": [ { "id": "NP_001032751", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032751", "type": "external" } ], "gene_names_uniprotkb": "sox1b; si:ch211-138g9.1", "gene_names_refseq": "sox1b", "protein_names_uniprotkb": "Transcription factor Sox-1b", "protein_names_refseq": "SRY (sex determining region Y)-box 1b; SRY-box containing gene 1b; transcription factor Sox-1b; transcription factor sox1b", "tax_id": 7955, "disease": "X-linked panhypopituitarism (Disease Ontology:DOID:0111779)", "pathway": " (dre:562710)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "16408288;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AB242328.1 [ECO:0000332] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AB242328.1. On Dec 10, 2005 this sequence version replaced XP_691178.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Transcriptional activator., [UniProtKB, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8WFX7", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005667 transcription regulator complex", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0007420 brain development;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q2Z1R2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32LQ3-1", "uniprot_id": [ { "id": "OSGL1_DANRE", "url": "https://www.uniprot.org/uniprot/Q32LQ3", "type": "external" } ], "mass": 43957.0, "length": 404, "protein_name": "tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial", "gene_name": "osgepl1", "organism": "Zebrafish", "refseq_name": "tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial", "refseq_ac": [ { "id": "NP_001005301", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001005301", "type": "external" } ], "gene_names_uniprotkb": "osgepl1; si:dz72b14.6", "gene_names_refseq": "osgepl1; si:dz72b14.6", "protein_names_uniprotkb": "tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; 2.3.1.234; N6-L-threonylcarbamoyladenine synthase; O-sialoglycoprotein endopeptidase-like protein 1; t(6)A synthase; t(6)A37 threonylcarbamoyladenosine biosynthesis protein osgepl1; tRNA threonylcarbamoyladenosine biosynthesis protein osgepl1", "protein_names_refseq": "N6-L-threonylcarbamoyladenine synthase; glycoprotease; probable O-sialoglycoprotein endopeptidase 2; probable tRNA threonylcarbamoyladenosine biosynthesis protein osgepl1; t(6)A synthase; tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:368635)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC109473.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476734, SAMEA4476751 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AL672217.6. On or before Jul 6, 2005 this sequence version replaced XP_709861.1, XP_687455.1., [RefSeq]; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q8JFR7;Q8JFW3", "ec_number_list": [ { "id": "2.3.1.234", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.234", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0061711 tRNA N(6)-L-threonylcarbamoyladenine synthase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0002949 tRNA threonylcarbamoyladenosine modification", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q32LQ3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32LQ4-1", "uniprot_id": [ { "id": "BHMT1_DANRE", "url": "https://www.uniprot.org/uniprot/Q32LQ4", "type": "external" } ], "mass": 44066.0, "length": 400, "protein_name": "Betaine--homocysteine S-methyltransferase 1", "gene_name": "bhmt", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "bhmt; wu:fb53h01; zgc:123027", "gene_names_refseq": "", "protein_names_uniprotkb": "Betaine--homocysteine S-methyltransferase 1; 2.1.1.5", "protein_names_refseq": "", "tax_id": 7955, "disease": "metabolic dysfunction and alcohol associated liver disease (Disease Ontology:DOID:0070508); alcohol-associated liver disease (Disease Ontology:DOID:0070658); congenital heart disease (Disease Ontology:DOID:1682); cerebral infarction (Disease Ontology:DOID:3526); hepatocellular carcinoma (Disease Ontology:DOID:684); pulmonary embolism (Disease Ontology:DOID:9477)", "pathway": " (dre:322228); (R-DRE-1614635); (R-DRE-6798163)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "Involved in the regulation of homocysteine metabolism. Converts betaine and homocysteine to dimethylglycine and methionine, respectively. This reaction is also required for the irreversible oxidation of choline (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5PSM1", "ec_number_list": [ { "id": "2.1.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.5", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0047150 betaine-homocysteine S-methyltransferase activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0032259 methylation;GO:0055123 digestive system development;GO:0003323 type B pancreatic cell development;GO:0006579 amino-acid betaine catabolic process;GO:0071267 L-methionine salvage", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q32LQ4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32LU7-1", "uniprot_id": [ { "id": "PTCD3_DANRE", "url": "https://www.uniprot.org/uniprot/Q32LU7", "type": "external" } ], "mass": 76005.0, "length": 667, "protein_name": "Small ribosomal subunit protein mS39", "gene_name": "ptcd3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "ptcd3; zgc:123014", "gene_names_refseq": "", "protein_names_uniprotkb": "Small ribosomal subunit protein mS39; Pentatricopeptide repeat domain-containing protein 3, mitochondrial", "protein_names_refseq": "", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 51 (Disease Ontology:DOID:0112137)", "pathway": " (dre:553325); (R-DRE-5389840); (R-DRE-5419276); (R-DRE-9937383)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Mitochondrial RNA-binding protein that may have a role in mitochondrial translation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5BLA3", "ec_number_list": [], "go_molecular_function": "GO:0043024 ribosomal small subunit binding;GO:0019843 rRNA binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005840 ribosome;GO:1990904 ribonucleoprotein complex", "go_biological_process": "GO:0006417 regulation of translation;GO:0032543 mitochondrial translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q32LU7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32PN7-1", "uniprot_id": [ { "id": "DZI1L_DANRE", "url": "https://www.uniprot.org/uniprot/Q32PN7", "type": "external" } ], "mass": 86384.0, "length": 756, "protein_name": "Cilium assembly protein DZIP1L", "gene_name": "dzip1l", "organism": "Zebrafish", "refseq_name": "cilium assembly protein DZIP1L", "refseq_ac": [ { "id": "NP_001032304", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032304", "type": "external" } ], "gene_names_uniprotkb": "dzip1l; zgc:123017", "gene_names_refseq": "dzip1l; zgc:123017", "protein_names_uniprotkb": "Cilium assembly protein DZIP1L; DAZ-interacting zinc finger protein 1-like", "protein_names_refseq": "DAZ interacting protein 1-like; DAZ-interacting protein 1-like protein; cilium assembly protein DZIP1L; zinc finger protein DZIP1L", "tax_id": 7955, "disease": "polycystic kidney disease 5 (Disease Ontology:DOID:0080273); autosomal recessive polycystic kidney disease (Disease Ontology:DOID:0110861)", "pathway": " (dre:553313)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "28530676", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC108046.1, GFIL01044859.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. On Aug 9, 2023 this sequence version replaced NP_001032304.1., [RefSeq]; Inactivation of dzip1l with morpholino antisense oligonucleotides causes phenotypes consistent with ciliary dysfunction. There are defects in glomerular and pronephric tubules in transgenic embryos blocked with these morpholino oligos.CRISPR-Cas9 deletion of exons 2 and 13 caused highly penetrant defects in otolith deposition but no additional abnormalities., [RefSeq, PubMed]; Involved in primary cilium formation (PubMed:28530676). Probably acts as a transition zone protein required for localization of PKD1/PC1 and PKD2/PC2 to the ciliary membrane., [UniProtKB, UniProtKB, PubMed]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005814 centriole;GO:0036064 ciliary basal body", "go_biological_process": "GO:0032880 regulation of protein localization;GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q32PN7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32PR0-1", "uniprot_id": [ { "id": "T55BA_DANRE", "url": "https://www.uniprot.org/uniprot/Q32PR0", "type": "external" } ], "mass": 28766.0, "length": 270, "protein_name": "Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-A", "gene_name": "tmem55ba", "organism": "Zebrafish", "refseq_name": "type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-A", "refseq_ac": [ { "id": "NP_001032453", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001032453", "type": "external" } ], "gene_names_uniprotkb": "tmem55ba; zgc:123304", "gene_names_refseq": "fe11b12; pip4p1a; tmem55ba; wu:fe11b12; zgc:123304", "protein_names_uniprotkb": "Type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-A; 3.1.3.78; PtdIns-4,5-P2 4-Ptase I-A; Transmembrane protein 55B-A", "protein_names_refseq": "ptdIns-4,5-P2 4-Ptase I-A; transmembrane protein 55B-A; transmembrane protein 55Ba; type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-A", "tax_id": 7955, "disease": "", "pathway": " (dre:556136); (R-DRE-6811555); (R-DRE-8847453)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC108019.1, GDQH01015109.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Nov 26, 2005 this sequence version replaced XP_683961.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Catalyzes the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.78", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.78", "type": "external" } ], "go_molecular_function": "GO:0034597 phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:0030670 phagocytic vesicle membrane", "go_biological_process": "GO:0046856 phosphatidylinositol dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q32PR0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q32PV0-1", "uniprot_id": [ { "id": "GULP1_DANRE", "url": "https://www.uniprot.org/uniprot/Q32PV0", "type": "external" } ], "mass": 33860.0, "length": 300, "protein_name": "PTB domain-containing engulfment adapter protein 1", "gene_name": "gulp1a; gulp1", "organism": "Zebrafish", "refseq_name": "PTB domain-containing engulfment adapter protein 1 isoform 1", "refseq_ac": [ { "id": "NP_001007183", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007183", "type": "external" } ], "gene_names_uniprotkb": "gulp1a; gulp1; CED-6; ced6; gulp1; si:by35d8.1; si:ch211-198b21.4; si:xx-35d8.1; wu:fj61e02", "gene_names_refseq": "CED-6; gulp1a; gulp1; si:by35d8.1; si:ch211-198b21.4; si:xx-35d8.1; wu:fj61e02", "protein_names_uniprotkb": "PTB domain-containing engulfment adapter protein 1; Cell death protein 6 homolog; PTB domain adapter protein CED-6", "protein_names_refseq": "GULP, engulfment adaptor PTB domain containing 1a; PTB domain adapter protein CED-6; PTB domain-containing engulfment adapter protein 1 isoform 1; PTB domain-containing engulfment adapter protein 1; cell death protein 6 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:368404)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "23594743;24815885;26469318;27189481;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01012209.1, BC107973.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505373 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB836043.1, EH555841.1, EB928166.1, EH576944.1, CT643886.2, JBMGRA010000009.1 and AW282049.1., [RefSeq]; May function as an adapter protein. Required for efficient phagocytosis of apoptotic cells. May play a role in the internalization and endosomal trafficking of various lrp1 ligands (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A2AI65;B0S741;B0S742", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006909 phagocytosis;GO:0006915 apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q32PV0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3B7H1-1", "uniprot_id": [ { "id": "GALD1_DANRE", "url": "https://www.uniprot.org/uniprot/Q3B7H1", "type": "external" } ], "mass": 22861.0, "length": 213, "protein_name": "Glutamine amidotransferase-like class 1 domain-containing protein 1", "gene_name": "gatd1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "gatd1; Fy-5; pddc1; zgc:123196", "gene_names_refseq": "", "protein_names_uniprotkb": "Glutamine amidotransferase-like class 1 domain-containing protein 1; Ferry endosomal RAB5 effector complex subunit 5; Fy-5; Parkinson disease 7 domain-containing protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:100148360)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Component of the FERRY complex (Five-subunit Endosomal Rab5 and RNA/ribosome intermediary). The FERRY complex directly interacts with mRNAs and RAB5A, and functions as a RAB5A effector involved in the localization and the distribution of specific mRNAs most likely by mediating their endosomal transport. The complex recruits mRNAs and ribosomes to early endosomes through direct mRNA-interaction., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019172 glyoxalase III activity", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005769 early endosome", "go_biological_process": "GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q3B7H1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q3B7H2-1", "uniprot_id": [ { "id": "TAM41_DANRE", "url": "https://www.uniprot.org/uniprot/Q3B7H2", "type": "external" } ], "mass": 38245.0, "length": 338, "protein_name": "Phosphatidate cytidylyltransferase, mitochondrial", "gene_name": "tamm41", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "tamm41; TAM41; zgc:123195", "gene_names_refseq": "", "protein_names_uniprotkb": "Phosphatidate cytidylyltransferase, mitochondrial; 2.7.7.41; CDP-DAG synthase; CDP-diacylglycerol synthase; Mitochondrial translocator assembly and maintenance protein 41 homolog; TAM41", "protein_names_refseq": "", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 56 (Disease Ontology:DOID:0070429); mitochondrial metabolism disease (Disease Ontology:DOID:700)", "pathway": " (dre:641323)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Catalyzes the conversion of phosphatidic acid (PA) to CDP-diacylglycerol (CDP-DAG), an essential intermediate in the synthesis of phosphatidylglycerol, cardiolipin and phosphatidylinositol., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.7.41", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.41", "type": "external" } ], "go_molecular_function": "GO:0004605 phosphatidate cytidylyltransferase activity;GO:0016779 nucleotidyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0016024 CDP-diacylglycerol biosynthetic process;GO:0032049 cardiolipin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q3B7H2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q499A3-1", "uniprot_id": [ { "id": "KTU_DANRE", "url": "https://www.uniprot.org/uniprot/Q499A3", "type": "external" } ], "mass": 62676.0, "length": 566, "protein_name": "Protein kintoun", "gene_name": "dnaaf2", "organism": "Zebrafish", "refseq_name": "protein kintoun", "refseq_ac": [ { "id": "NP_001028272", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001028272", "type": "external" } ], "gene_names_uniprotkb": "dnaaf2; ktu; zgc:110294", "gene_names_refseq": "dnaaf2; ktu; zgc:110294", "protein_names_uniprotkb": "Protein kintoun; Dynein assembly factor 2, axonemal", "protein_names_refseq": "dynein assembly factor 2, axonemal; protein kintoun", "tax_id": 7955, "disease": "primary ciliary dyskinesia 10 (Disease Ontology:DOID:0110612)", "pathway": " (dre:606664)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC100006.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC100006.1., [RefSeq]; Required for cytoplasmic pre-assembly of axonemal dyneins, thereby playing a central role in motility in cilia and flagella. Involved in pre-assembly of dynein arm complexes in the cytoplasm before intraflagellar transport loads them for the ciliary compartment., [UniProtKB, HAMAP]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0120293 dynein axonemal particle", "go_biological_process": "GO:0003351 epithelial cilium movement involved in extracellular fluid movement;GO:0060285 cilium-dependent cell motility;GO:0070286 axonemal dynein complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q499A3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q499B3-1", "uniprot_id": [ { "id": "KANL3_DANRE", "url": "https://www.uniprot.org/uniprot/Q499B3", "type": "external" } ], "mass": 89595.0, "length": 835, "protein_name": "KAT8 regulatory NSL complex subunit 3", "gene_name": "kansl3", "organism": "Zebrafish", "refseq_name": "KAT8 regulatory NSL complex subunit 3", "refseq_ac": [ { "id": "NP_001029348", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001029348", "type": "external" } ], "gene_names_uniprotkb": "kansl3; fb43d12; nsl3; wu:fb43d12; zgc:109953", "gene_names_refseq": "fb43d12; kansl3; wu:fb43d12; zgc:109953", "protein_names_uniprotkb": "KAT8 regulatory NSL complex subunit 3; NSL complex protein NSL3; Non-specific lethal 3 homolog", "protein_names_refseq": "KAT8 regulatory NSL complex subunit 3; NSL complex protein NSL3; non-specific lethal 3 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:555951); (R-DRE-3214847)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC099996.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC099996.1. On Oct 16, 2005 this sequence version replaced XP_683706.1., [RefSeq]; Non-catalytic component of the NSL histone acetyltransferase complex, a multiprotein complex that mediates histone H4 acetylation at 'Lys-5'- and 'Lys-8' (H4K5ac and H4K8ac) at transcription start sites and promotes transcription initiation. The NSL complex also acts as a regulator of gene expression in mitochondria. Within the NSL complex, KANSL3 is required to promote KAT8 association with mitochondrial DNA. Required for transcription of intraciliary transport genes in both ciliated and non-ciliated cells. This is necessary for cilium assembly in ciliated cells and for organization of the microtubule cytoskeleton in non-ciliated cells. Also required within the NSL complex to maintain nuclear architecture stability by promoting KAT8-mediated acetylation of lamin LMNA. Plays an essential role in spindle assembly during mitosis. Acts as a microtubule minus-end binding protein which stabilizes microtubules and promotes their assembly., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000922 spindle pole;GO:0005634 nucleus;GO:0005739 mitochondrion;GO:0005874 microtubule;GO:0000123 histone acetyltransferase complex", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0006325 chromatin organization;GO:1903108 regulation of mitochondrial transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q499B3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4G6A6-1", "uniprot_id": [ { "id": "Q4G6A6_DANRE", "url": "https://www.uniprot.org/uniprot/Q4G6A6", "type": "external" } ], "mass": 11288.0, "length": 104, "protein_name": "Bone Gla protein", "gene_name": "bglap", "organism": "Zebrafish", "refseq_name": "osteocalcin precursor", "refseq_ac": [ { "id": "NP_001077326", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001077326", "type": "external" } ], "gene_names_uniprotkb": "bglap; si:ch1073-504d15.2", "gene_names_refseq": "bglap; si:ch1073-504d15.2", "protein_names_uniprotkb": "Bone Gla protein; Gamma-carboxyglutamic acid-containing protein", "protein_names_refseq": "DrOC1; bgp; bone Gla protein; gamma-carboxyglutamic acid-containing protein; osteocalcin precursor; osteocalcin", "tax_id": 7955, "disease": "calcium oxalate nephrolithiasis (Disease Ontology:DOID:0080652); neurofibromatosis 1 (Disease Ontology:DOID:0111253); progressive osseous heteroplasia (Disease Ontology:DOID:0111535); prostate cancer (Disease Ontology:DOID:10283); vitamin K deficiency bleeding (Disease Ontology:DOID:11249); osteoporosis (Disease Ontology:DOID:11476); nephrotic syndrome (Disease Ontology:DOID:1184); Parkinson's disease (Disease Ontology:DOID:14330); cystic fibrosis (Disease Ontology:DOID:1485); calcinosis (Disease Ontology:DOID:182); rheumatoid arthritis (Disease Ontology:DOID:7148); end stage renal disease (Disease Ontology:DOID:783); osteoarthritis (Disease Ontology:DOID:8398); Crohn's disease (Disease Ontology:DOID:8778); type 2 diabetes mellitus (Disease Ontology:DOID:9352); diabetes insipidus (Disease Ontology:DOID:9409); type 1 diabetes mellitus (Disease Ontology:DOID:9744)", "pathway": " (dre:792433)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "14668966;15849363;16007341;16458082;16565091;38259612;38477756;38485506;39045128;39449233", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH442597.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from EH442597.1. On Apr 5, 2007 this sequence version replaced XP_001331943.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; In zebrafish, bgp and mgp mRNAs were localized in all mineralized tissues during and after calcification including bone and calcified cartilage of branchial arches., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 17, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:1900076 regulation of cellular response to insulin stimulus;GO:0009612 response to mechanical stimulus;GO:0060348 bone development;GO:0031214 biomineral tissue development;GO:0032571 response to vitamin K", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "Q4G6A6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4KMK0-1", "uniprot_id": [ { "id": "NSUN3_DANRE", "url": "https://www.uniprot.org/uniprot/Q4KMK0", "type": "external" } ], "mass": 41270.0, "length": 367, "protein_name": "tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial", "gene_name": "nsun3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "nsun3; im:7142194; zgc:109983", "gene_names_refseq": "", "protein_names_uniprotkb": "tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial; 2.1.1.-; NOL1/NOP2/Sun domain family member 3", "protein_names_refseq": "", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 48 (Disease Ontology:DOID:0112112)", "pathway": " (dre:553534)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "23594743;26469318;27189481;31562209", "class_list": "", "function": "Mitochondrial tRNA methyltransferase that mediates methylation of cytosine to 5-methylcytosine (m5C) at position 34 of mt-tRNA(Met). mt-tRNA(Met) methylation at cytosine(34) takes place at the wobble position of the anticodon and initiates the formation of 5-formylcytosine (f(5)c) at this position. mt-tRNA(Met) containing the f(5)c modification at the wobble position enables recognition of the AUA codon in addition to the AUG codon, expanding codon recognition in mitochondrial translation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F6NJM6;Q6DG64", "ec_number_list": [ { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0016428 tRNA (cytidine-5-)-methyltransferase activity;GO:0000049 tRNA binding;GO:0008168 methyltransferase activity;GO:0003723 RNA binding;GO:0008173 RNA methyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005759 mitochondrial matrix", "go_biological_process": "GO:0031167 rRNA methylation;GO:0070129 regulation of mitochondrial translation;GO:0002127 tRNA wobble base cytosine methylation;GO:0006396 RNA processing;GO:0001510 RNA methylation", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q4KMK0-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4QRC6-1", "uniprot_id": [ { "id": "ISCA1_DANRE", "url": "https://www.uniprot.org/uniprot/Q4QRC6", "type": "external" } ], "mass": 14248.0, "length": 129, "protein_name": "Iron-sulfur cluster assembly 1 homolog, mitochondrial", "gene_name": "isca1", "organism": "Zebrafish", "refseq_name": "iron-sulfur cluster assembly 1 homolog, mitochondrial precursor", "refseq_ac": [ { "id": "NP_001020349", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001020349", "type": "external" } ], "gene_names_uniprotkb": "isca1; hbld2; magr; zgc:114185", "gene_names_refseq": "isca1; magr; zgc:114185", "protein_names_uniprotkb": "Iron-sulfur cluster assembly 1 homolog, mitochondrial; HESB-like domain-containing protein 2; Iron-sulfur assembly protein IscA", "protein_names_refseq": "HESB-like domain-containing protein 2; iron-sulfur assembly protein IscA; iron-sulfur cluster assembly 1 homolog, mitochondrial precursor; iron-sulfur cluster assembly 1 homolog, mitochondrial", "tax_id": 7955, "disease": "multiple mitochondrial dysfunctions syndrome 5 (Disease Ontology:DOID:0080274)", "pathway": " (dre:573999)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "19656490;27614751", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC097234.1, EH584315.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505381 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC097234.1., [RefSeq]; Data indicate that magnetic receptor magnetoreceptor (MagR) and cryptochrome cry2 exist as a single copy gene, whereas cry1 exists as multiple gene duplicates (cry1aa, cry1ab, cry1ba and cry1bb)., [RefSeq, PubMed]; Involved in the maturation of mitochondrial 4Fe-4S proteins functioning late in the iron-sulfur cluster assembly pathway. Probably involved in the binding of an intermediate of Fe/S cluster assembly., [UniProtKB, UniProtKB]; Required for functional heme biosynthesis in erythroid cells., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051537 2 iron, 2 sulfur cluster binding;GO:0051536 iron-sulfur cluster binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion", "go_biological_process": "GO:0016226 iron-sulfur cluster assembly;GO:0051604 protein maturation;GO:0006783 heme biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q4QRC6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V8Y6-1", "uniprot_id": [ { "id": "ERGI1_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V8Y6", "type": "external" } ], "mass": 32529.0, "length": 290, "protein_name": "Endoplasmic reticulum-Golgi intermediate compartment protein 1", "gene_name": "ergic1", "organism": "Zebrafish", "refseq_name": "endoplasmic reticulum-Golgi intermediate compartment protein 1", "refseq_ac": [ { "id": "NP_001025133", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025133", "type": "external" } ], "gene_names_uniprotkb": "ergic1; ERGIC-32; ergic32; zgc:114085", "gene_names_refseq": "ERGIC-32; ergic1; zgc:114085", "protein_names_uniprotkb": "Endoplasmic reticulum-Golgi intermediate compartment protein 1; ER-Golgi intermediate compartment 32 kDa protein; ERGIC-32", "protein_names_refseq": "ER-Golgi intermediate compartment 32 kDa protein; endoplasmic reticulum-Golgi intermediate compartment protein 1; endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1", "tax_id": 7955, "disease": "neurogenic-type arthrogryposis multiplex congenita-2 (Disease Ontology:DOID:0090124)", "pathway": " (dre:567774)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01044808.1, SRR26395015.982601.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476734, SAMEA4476744 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On or before Apr 21, 2018 this sequence version replaced XP_005157259.1, NP_001025133.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]; Plays a role in transport between endoplasmic reticulum and Golgi., [UniProtKB, UniProtKB]; Possible role in transport between endoplasmic reticulum and Golgi., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005783 endoplasmic reticulum;GO:0030134 COPII-coated ER to Golgi transport vesicle;GO:0005789 endoplasmic reticulum membrane;GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane", "go_biological_process": "GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V8Y6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V8Z3-1", "uniprot_id": [ { "id": "CEP19_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V8Z3", "type": "external" } ], "mass": 18905.0, "length": 161, "protein_name": "Centrosomal protein of 19 kDa", "gene_name": "cep19", "organism": "Zebrafish", "refseq_name": "centrosomal protein of 19 kDa", "refseq_ac": [ { "id": "NP_001028906", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001028906", "type": "external" } ], "gene_names_uniprotkb": "cep19; si:ch73-159l23.3; wu:fb48f01; zgc:114076", "gene_names_refseq": "cep19; im:7136234; wu:fb48f01; zgc:114076", "protein_names_uniprotkb": "Centrosomal protein of 19 kDa; Cep19", "protein_names_refseq": "centrosomal protein of 19 kDa", "tax_id": 7955, "disease": "", "pathway": " (dre:619252)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395017.377447.1, SRR26395012.24700.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000022.1. On Jul 2, 2025 this sequence version replaced XP_068072466.1., [RefSeq]; Required for ciliation. Recruits the RABL2B GTPase to the ciliary base to initiate ciliation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000922 spindle pole;GO:0005813 centrosome;GO:0005814 centriole;GO:0036064 ciliary basal body", "go_biological_process": "GO:0060271 cilium assembly;GO:0034454 microtubule anchoring at centrosome;GO:0097712 vesicle targeting, trans-Golgi to periciliary membrane compartment;GO:0030030 cell projection organization", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q4V8Z3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V9J0-1", "uniprot_id": [ { "id": "QTGAL_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V9J0", "type": "external" } ], "mass": 38682.0, "length": 338, "protein_name": "Queuosine-tRNA galactosyltransferase", "gene_name": "qtgal", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "qtgal; QTGAL; b3gntl1; wu:fc19f09; zgc:112249", "gene_names_refseq": "", "protein_names_uniprotkb": "Queuosine-tRNA galactosyltransferase; 2.4.1.-; BGnT-like protein 1; Beta1,3-N-acetylglucosaminyltransferase-like protein 1; Beta3Gn-T-like protein 1; Beta3GnTL1; QTGAL; UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:619261); (R-DRE-913709)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "23594743;26469318;37992713", "class_list": "glycogene;glycosyltransferase", "function": "Glycosyltransferase that specifically catalyzes galactosylation of cytoplasmic tRNA(Tyr) modified with queuosine at position 34 (queuosine(34)). Galactosylates the cyclopentene hydroxyl group of queuosine(34) in tRNA(Tyr) to form galactosyl-queuosine(34). Mannosylation of queuosine(34) in tRNA(Tyr) is required to slow-down elongation at cognate codons UAC and suppress stop codon readthrough, thereby regulating protein translation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" }, { "id": "2.4.1.206", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.206", "type": "external" } ], "go_molecular_function": "GO:0141125 tRNA-queuosine(34) galactosyltransferase activity;GO:0016758 hexosyltransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006417 regulation of translation;GO:0006400 tRNA modification", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q4V9J0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.11000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V9N1-1", "uniprot_id": [ { "id": "Q4V9N1_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V9N1", "type": "external" } ], "mass": 26167.0, "length": 227, "protein_name": "Translin", "gene_name": "tsn", "organism": "Zebrafish", "refseq_name": "translin", "refseq_ac": [ { "id": "NP_001020623", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001020623", "type": "external" } ], "gene_names_uniprotkb": "tsn; id:ibd2900; wu:fb38b07; wu:fi31h02; zgc:123170", "gene_names_refseq": "id:ibd2900; tsn; wu:fb38b07; wu:fi31h02; zgc:123170", "protein_names_uniprotkb": "Translin; Component 3 of promoter of RISC", "protein_names_refseq": "translin", "tax_id": 7955, "disease": "", "pathway": " (dre:334107)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "11731487;28252024;40044042", "class_list": "", "function": "DNA-binding protein that specifically recognizes consensus sequences at the breakpoint junctions in chromosomal translocations, mostly involving immunoglobulin (Ig)/T-cell receptor gene segments. Seems to recognize single-stranded DNA ends generated by staggered breaks occurring at recombination hot spots., [UniProtKB, UniProtKB]; Exhibits both single-stranded and double-stranded endoribonuclease activity. May act as an activator of RNA-induced silencing complex (RISC) by facilitating endonucleolytic cleavage of the siRNA passenger strand., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0R113", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004519 endonuclease activity;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0016070 RNA metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "Q4V9N1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V9P0-1", "uniprot_id": [ { "id": "SAMC_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V9P0", "type": "external" } ], "mass": 28995.0, "length": 267, "protein_name": "Mitochondrial S-adenosylmethionine carrier protein", "gene_name": "slc25a26", "organism": "Zebrafish", "refseq_name": "mitochondrial S-adenosylmethionine carrier protein", "refseq_ac": [ { "id": "NP_001025314", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025314", "type": "external" } ], "gene_names_uniprotkb": "slc25a26; samc; zgc:110080", "gene_names_refseq": "SAMC; slc25a26; zgc:110080", "protein_names_uniprotkb": "Mitochondrial S-adenosylmethionine carrier protein; SAM carrier; Solute carrier family 25 member 26", "protein_names_refseq": "S-adenosylmethionine mitochondrial carrier protein; SAM carrier; mitochondrial S-adenosylmethionine carrier protein; mitochondrial S-adenosylmethionine transporter; solute carrier family 25 (S-adenosylmethionine carrier), member 26", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 28 (Disease Ontology:DOID:0111470)", "pathway": " (dre:560478); (R-DRE-549127)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC096793.1, BC153538.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC096793.1. On Aug 6, 2005 this sequence version replaced XP_688973.1., [RefSeq]; Mitochondrial S-adenosyl-L-methionine/S-adenosyl-L-homocysteine antiporter. Mediates the exchange of cytosolic S-adenosyl-L-methionine, the predominant methyl-group donor for macromolecule methylation processes, for mitochondrial S-adenosylhomocysteine(SAH), a by-product of methylation reactions., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity;GO:0180003 S-adenosyl-L-methionine:S-adenosyl-L-homocysteine antiporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0015805 S-adenosyl-L-methionine transport;GO:1990543 mitochondrial S-adenosyl-L-methionine transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V9P0-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V9P3-1", "uniprot_id": [ { "id": "R7BPB_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V9P3", "type": "external" } ], "mass": 28455.0, "length": 251, "protein_name": "Regulator of G protein signaling 7-binding protein B", "gene_name": "rgs7bpb", "organism": "Zebrafish", "refseq_name": "regulator of G-protein signaling 7-binding protein B", "refseq_ac": [ { "id": "NP_001025240", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025240", "type": "external" } ], "gene_names_uniprotkb": "rgs7bpb; wu:fj83a05; zgc:110002", "gene_names_refseq": "fj83a05; rgs7bpb; rgs7bp; wu:fj83a05; zgc:110002", "protein_names_uniprotkb": "Regulator of G protein signaling 7-binding protein B; R7 family-binding protein B", "protein_names_refseq": "R7 family-binding protein B; regulator of G-protein signaling 7-binding protein B", "tax_id": 7955, "disease": "", "pathway": " (dre:337556)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC096790.1, BC152595.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505380 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC096790.1. On Aug 6, 2005 this sequence version replaced XP_699419.1., [RefSeq]; Regulator of G protein-coupled receptor (GPCR) signaling. Regulatory subunit of the R7-Gbeta5 complexes that acts by controlling the subcellular location of the R7-Gbeta5 complexes. When palmitoylated, it targets the R7-Gbeta5 complexes to the plasma membrane, leading to inhibit G protein alpha subunits. When it is unpalmitoylated, the R7-Gbeta5 complexes undergo a nuclear/cytoplasmic shuttling (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0098794 postsynapse;GO:0043005 neuron projection", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0009968 negative regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V9P3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4V9P6-1", "uniprot_id": [ { "id": "ADAL_DANRE", "url": "https://www.uniprot.org/uniprot/Q4V9P6", "type": "external" } ], "mass": 39190.0, "length": 348, "protein_name": "N6-Methyl-AMP deaminase", "gene_name": "mapda", "organism": "Zebrafish", "refseq_name": "N6-Methyl-AMP deaminase", "refseq_ac": [ { "id": "NP_001028916", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001028916", "type": "external" } ], "gene_names_uniprotkb": "mapda; adal; zgc:109912", "gene_names_refseq": "adal; mapda; zgc:109912", "protein_names_uniprotkb": "N6-Methyl-AMP deaminase; 3.5.4.-; Adenosine deaminase-like protein; N6,N6-dimethyl-AMP deaminase; N6-isopentenyl-AMP deaminase", "protein_names_refseq": "N6,N6-dimethyl-AMP deaminase; N6-Methyl-AMP deaminase; N6-isopentenyl-AMP deaminase; adenosine deaminase-like protein", "tax_id": 7955, "disease": "", "pathway": " (dre:619263); (R-DRE-2161541); (R-DRE-74217)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC096787.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC096787.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Deaminase involved in the detoxification of modified adenosines containing N(6)-methylated adenine (m6A) post-transcriptional modification. Modified nucleosides are derived from the degradation of RNAs (mRNAs, rRNAs and tRNAs) and possess intrinsic cytotoxicity and must be cleared to prevent metabolic dysfunction. Acts downstream of ADK and catalyzes the hydrolysis of the free cytosolic methylated adenosine nucleotides N(6)-methyl-AMP (m6AMP), N(6),N(6)-dimethyl-AMP (m6,6AMP) and N(6)-isopentenyl-AMP (i6AMP) to produce inositol monophosphate (IMP)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A7MCN2", "ec_number_list": [ { "id": "3.5.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.4.-", "type": "external" } ], "go_molecular_function": "GO:0004000 adenosine deaminase activity;GO:0046872 metal ion binding;GO:0062154 N6-methyl-AMP deaminase activity", "go_cellular_component": "", "go_biological_process": "GO:0006154 adenosine catabolic process;GO:0009117 nucleotide metabolic process;GO:0046103 inosine biosynthetic process;GO:0043010 camera-type eye development;GO:0110052 toxic metabolite repair", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4V9P6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4VBI7-1", "uniprot_id": [ { "id": "STX18_DANRE", "url": "https://www.uniprot.org/uniprot/Q4VBI7", "type": "external" } ], "mass": 36241.0, "length": 314, "protein_name": "Syntaxin-18", "gene_name": "stx18", "organism": "Zebrafish", "refseq_name": "syntaxin-18", "refseq_ac": [ { "id": "NP_001019596", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001019596", "type": "external" } ], "gene_names_uniprotkb": "stx18; zgc:112326", "gene_names_refseq": "stx18; zgc:112326", "protein_names_uniprotkb": "Syntaxin-18", "protein_names_refseq": "syntaxin-18", "tax_id": 7955, "disease": "", "pathway": " (dre:554130); (R-DRE-6811434)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "37718532", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095763.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095763.1., [RefSeq]; Syntaxin 18 Defects in Human and Zebrafish Unravel Key Roles in Early Cartilage and Bone Development., [RefSeq, PubMed]; Syntaxin that may be involved in targeting and fusion of Golgi-derived retrograde transport vesicles with the ER., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005484 SNAP receptor activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane;GO:0031201 SNARE complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q4VBI7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4VBS4-1", "uniprot_id": [ { "id": "MAP12_DANRE", "url": "https://www.uniprot.org/uniprot/Q4VBS4", "type": "external" } ], "mass": 37785.0, "length": 338, "protein_name": "Methionine aminopeptidase 1D, mitochondrial", "gene_name": "metap1d", "organism": "Zebrafish", "refseq_name": "methionine aminopeptidase 1D, mitochondrial precursor", "refseq_ac": [ { "id": "NP_001019563", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001019563", "type": "external" } ], "gene_names_uniprotkb": "metap1d; MAP 1D; MetAP 1D; map1d; zgc:110461", "gene_names_refseq": "MAP 1D; MetAP 1D; map1d; metap1d; zgc:110461", "protein_names_uniprotkb": "Methionine aminopeptidase 1D, mitochondrial; 3.4.11.18; MAP 1D; MetAP 1D; Methionyl aminopeptidase type 1D, mitochondrial; Peptidase M 1D", "protein_names_refseq": "metAP 1D; methionine aminopeptidase 1D, mitochondrial precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:554090)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095283.1, EE326576.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095283.1., [RefSeq]; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val)., [UniProtKB, UniProtKB, UniProtKB]; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed., [UniProtKB, HAMAP]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0070006 metalloaminopeptidase activity;GO:0004239 initiator methionyl aminopeptidase activity;GO:0004177 aminopeptidase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q4VBS4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4VBT1-1", "uniprot_id": [ { "id": "FA1B1_DANRE", "url": "https://www.uniprot.org/uniprot/Q4VBT1", "type": "external" } ], "mass": 14115.0, "length": 128, "protein_name": "Fatty acid binding protein 1-B.1", "gene_name": "fabp1b.1", "organism": "Zebrafish", "refseq_name": "fatty acid binding protein 1-B.1", "refseq_ac": [ { "id": "NP_001019822", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001019822", "type": "external" } ], "gene_names_uniprotkb": "fabp1b.1; fabp1b; zgc:110431", "gene_names_refseq": "Zf-FABP1b; fabp1b.1; fabp1b; zgc:110431", "protein_names_uniprotkb": "Fatty acid binding protein 1-B.1; Fatty acid binding protein 1b; Zf-FABP1b", "protein_names_refseq": "fatty acid binding protein 1-B.1; zf-FABP1b", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763); IgA glomerulonephritis (Disease Ontology:DOID:2986); end stage renal disease (Disease Ontology:DOID:783)", "pathway": " (dre:554095); (R-DRE-163560); (R-DRE-189483); (R-DRE-400206); (R-DRE-9707564)", "pathway_count": 5, "publication_count": 3, "publication_id_list": "16857010;19725974;19953126", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095259.1, DQ474062.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095259.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Binds free fatty acids and their coenzyme A derivatives, bilirubin, and some other small molecules in the cytoplasm. May be involved in intracellular lipid transport (By similarity)., [UniProtKB, UniProtKB]; Data suggest that the duplicated fabp1b genes have acquired additional functions compared with the ancestral fabp1 gene, i.e., by neofunctionalization., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1AMT2", "ec_number_list": [], "go_molecular_function": "GO:0005504 fatty acid binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0015908 fatty acid transport;GO:0033993 response to lipid", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q4VBT1-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q4VBT5-1", "uniprot_id": [ { "id": "MKRN1_DANRE", "url": "https://www.uniprot.org/uniprot/Q4VBT5", "type": "external" } ], "mass": 49700.0, "length": 439, "protein_name": "Probable E3 ubiquitin-protein ligase makorin-1", "gene_name": "mkrn1", "organism": "Zebrafish", "refseq_name": "probable E3 ubiquitin-protein ligase makorin-1", "refseq_ac": [ { "id": "NP_694510", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_694510", "type": "external" } ], "gene_names_uniprotkb": "mkrn1; si:ch211-9f20.3; zgc:110403", "gene_names_refseq": "fl25h08; mkrn1; wu:fl25h08; zgc:110403", "protein_names_uniprotkb": "Probable E3 ubiquitin-protein ligase makorin-1; 2.3.2.27; RING-type E3 ubiquitin transferase makorin-1", "protein_names_refseq": "RING-type E3 ubiquitin transferase makorin-1; probable E3 ubiquitin-protein ligase makorin-1", "tax_id": 7955, "disease": "central precocious puberty 2 (Disease Ontology:DOID:0112309)", "pathway": " (dre:170782); (R-DRE-198323); (R-DRE-8948751); (R-DRE-983168)", "pathway_count": 4, "publication_count": 2, "publication_id_list": "11597136;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095243.1, GDQH01000978.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095243.1., [RefSeq]; E3 ubiquitin ligase catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1L8F6;Q9DFG7", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "2.3.2.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.34", "type": "external" }, { "id": "2.3.2.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.26", "type": "external" }, { "id": "6.2.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.45", "type": "external" }, { "id": "2.3.2.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.31", "type": "external" }, { "id": "2.3.2.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.23", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "3.4.19.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.19.12", "type": "external" }, { "id": "2.3.2.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.25", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0000209 protein polyubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q4VBT5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q501S4-1", "uniprot_id": [ { "id": "CSKMT_DANRE", "url": "https://www.uniprot.org/uniprot/Q501S4", "type": "external" } ], "mass": 28331.0, "length": 254, "protein_name": "Citrate synthase-lysine N-methyltransferase CSKMT, mitochondrial", "gene_name": "cskmt", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "cskmt; mettl12; zgc:113305", "gene_names_refseq": "", "protein_names_uniprotkb": "Citrate synthase-lysine N-methyltransferase CSKMT, mitochondrial; 2.1.1.-; CS-KMT; Methyltransferase-like protein 12, mitochondrial", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:553815); (R-DRE-9854311)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Protein-lysine methyltransferase that selectively trimethylates citrate synthase (CS) in mitochondria. Seems to conduct trimethylation in a highly distributive manner rather than in a processive manner, and thus introduces a single methyl group per binding event., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.-", "type": "external" }, { "id": "2.3.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.3.1", "type": "external" } ], "go_molecular_function": "GO:0016278 lysine N-methyltransferase activity;GO:0016279 protein-lysine N-methyltransferase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006479 protein methylation;GO:0018026 peptidyl-lysine monomethylation;GO:0018023 peptidyl-lysine trimethylation;GO:0018027 peptidyl-lysine dimethylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q501S4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q501V0-1", "uniprot_id": [ { "id": "KPSH1_DANRE", "url": "https://www.uniprot.org/uniprot/Q501V0", "type": "external" } ], "mass": 47933.0, "length": 422, "protein_name": "Serine/threonine-protein kinase H1 homolog", "gene_name": "pskh1", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase H1 homolog", "refseq_ac": [ { "id": "NP_001018546", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018546", "type": "external" } ], "gene_names_uniprotkb": "pskh1; si:ch211-201b11.4; wu:fc44h10; zgc:113034", "gene_names_refseq": "pskh1; si:ch211-201b11.4; wu:fc44h10; zgc:113034", "protein_names_uniprotkb": "Serine/threonine-protein kinase H1 homolog; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase H1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:554840)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095860.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476731 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095860.1. On or before Jul 6, 2005 this sequence version replaced XP_692443.1, XP_709650.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LWH5", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0106310 protein serine kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q501V0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502I6-1", "uniprot_id": [ { "id": "NB5R4_DANRE", "url": "https://www.uniprot.org/uniprot/Q502I6", "type": "external" } ], "mass": 59452.0, "length": 527, "protein_name": "Cytochrome b5 reductase 4", "gene_name": "cyb5r4", "organism": "Zebrafish", "refseq_name": "cytochrome b5 reductase 4", "refseq_ac": [ { "id": "NP_001018496", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018496", "type": "external" } ], "gene_names_uniprotkb": "cyb5r4; im:4727699; zgc:112177", "gene_names_refseq": "cyb5r4; im:4727699; zgc:112177", "protein_names_uniprotkb": "Cytochrome b5 reductase 4; 1.6.2.2; Flavohemoprotein b5/b5R; b5+b5R; cb5/cb5R", "protein_names_refseq": "b5+b5R; cb5/cb5R; cytochrome b5 reductase 4; flavohemoprotein b5/b5R; ncb5or", "tax_id": 7955, "disease": "type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:553685)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15827125;19308258;26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095683.1, SRR26395028.1447167.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: upstream AUG and CDS extension is not conserved ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Jun 20, 2024 this sequence version replaced NP_001018496.1., [RefSeq]; NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.6.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.2.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0020037 heme binding;GO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H;GO:0090524 cytochrome-b5 reductase activity, acting on NADH", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0006801 superoxide metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q502I6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502K1-1", "uniprot_id": [ { "id": "EXOG_DANRE", "url": "https://www.uniprot.org/uniprot/Q502K1", "type": "external" } ], "mass": 39053.0, "length": 343, "protein_name": "Nuclease EXOG, mitochondrial", "gene_name": "exog", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "exog; endogl1", "gene_names_refseq": "", "protein_names_uniprotkb": "Nuclease EXOG, mitochondrial; 3.1.30.-; Endo G-like 1; Endonuclease G-like 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Endo/exonuclease with nicking activity towards supercoiled DNA, a preference for single-stranded DNA and 5'-3' exonuclease activity., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0003676 nucleic acid binding;GO:0004521 RNA endonuclease activity;GO:0000014 single-stranded DNA endodeoxyribonuclease activity;GO:0008409 5'-3' exonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0006309 apoptotic DNA fragmentation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q502K1-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502L2-1", "uniprot_id": [ { "id": "PGAM5_DANRE", "url": "https://www.uniprot.org/uniprot/Q502L2", "type": "external" } ], "mass": 32173.0, "length": 289, "protein_name": "Serine/threonine-protein phosphatase PGAM5, mitochondrial", "gene_name": "pgam5", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein phosphatase PGAM5, mitochondrial precursor", "refseq_ac": [ { "id": "NP_001007324", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001007324", "type": "external" } ], "gene_names_uniprotkb": "pgam5; fb39f09; si:dkey-69p22.1; wu:fb39f09; wu:fj34f06; zgc:112041; zgc:92057", "gene_names_refseq": "fb39f09; pgam5; si:dkey-69p22.1; wu:fb39f09; wu:fj34f06; zgc:112041; zgc:92057", "protein_names_uniprotkb": "Serine/threonine-protein phosphatase PGAM5, mitochondrial; 3.1.3.16; Phosphoglycerate mutase family member 5", "protein_names_refseq": "phosphoglycerate mutase family member 5; serine/threonine-protein phosphatase PGAM5, mitochondrial precursor; serine/threonine-protein phosphatase PGAM5, mitochondrial", "tax_id": 7955, "disease": "", "pathway": " (dre:492357); (R-DRE-8934903); (R-DRE-9861718)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095654.1, BC085627.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CR388061.11, EB854230.1 and BC085627.1. On or before Jul 26, 2008 this sequence version replaced NP_001018303.1, NP_001007324.1., [RefSeq]; Displays phosphatase activity for serine/threonine residues. Has apparently no phosphoglycerate mutase activity. May be regulator of mitochondrial dynamics (By similarity). May be a central mediator for programmed necrosis (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A2CEB1;Q5U3B2", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" } ], "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane", "go_biological_process": "GO:0090141 positive regulation of mitochondrial fission;GO:0012501 programmed cell death", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q502L2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502L7-1", "uniprot_id": [ { "id": "KAD8_DANRE", "url": "https://www.uniprot.org/uniprot/Q502L7", "type": "external" } ], "mass": 55589.0, "length": 486, "protein_name": "Adenylate kinase 8", "gene_name": "ak8", "organism": "Zebrafish", "refseq_name": "adenylate kinase 8", "refseq_ac": [ { "id": "NP_001018480", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018480", "type": "external" } ], "gene_names_uniprotkb": "ak8; AK 8; fb81g03; si:ch211-89p1.4; wu:fb81g03; zgc:112030", "gene_names_refseq": "AK 8; ak8; fb81g03; si:ch211-89p1.4; wu:fb81g03; zgc:112030", "protein_names_uniprotkb": "Adenylate kinase 8; 2.7.4.3; 2.7.4.6; AK 8; ATP-AMP transphosphorylase 8", "protein_names_refseq": "ATP-AMP transphosphorylase 8; adenylate kinase 8; adenylate kinase-like protein", "tax_id": 7955, "disease": "hydrocephalus (Disease Ontology:DOID:10908)", "pathway": " (R-DRE-499943)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095649.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN06350654 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095649.1., [RefSeq]; Nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has highest activity toward AMP, and weaker activity toward dAMP, CMP and dCMP. Also displays broad nucleoside diphosphate kinase activity., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "2.7.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.6", "type": "external" }, { "id": "2.7.4.9", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.9", "type": "external" }, { "id": "2.7.4.14", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.14", "type": "external" } ], "go_molecular_function": "GO:0004017 AMP kinase activity;GO:0005524 ATP binding;GO:0004550 nucleoside diphosphate kinase activity;GO:0036431 dCMP kinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q502L7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q502M8-1", "uniprot_id": [ { "id": "ERI2_DANRE", "url": "https://www.uniprot.org/uniprot/Q502M8", "type": "external" } ], "mass": 61646.0, "length": 555, "protein_name": "ERI1 exoribonuclease 2", "gene_name": "eri2", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "eri2; exod1; zgc:111991", "gene_names_refseq": "", "protein_names_uniprotkb": "ERI1 exoribonuclease 2; 3.1.-.-; Exonuclease domain-containing protein 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:553667)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0000175 3'-5'-RNA exonuclease activity", "go_cellular_component": "", "go_biological_process": "GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA);GO:0060906 negative regulation of regulatory ncRNA-mediated heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q502M8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503E9-1", "uniprot_id": [ { "id": "IMA6_DANRE", "url": "https://www.uniprot.org/uniprot/Q503E9", "type": "external" } ], "mass": 60109.0, "length": 539, "protein_name": "Importin subunit alpha-6", "gene_name": "kpna5", "organism": "Zebrafish", "refseq_name": "importin subunit alpha-6", "refseq_ac": [ { "id": "NP_001018163", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018163", "type": "external" } ], "gene_names_uniprotkb": "kpna5; im:7151662; zgc:110662", "gene_names_refseq": "im:7151662; kpna5; zgc:110662", "protein_names_uniprotkb": "Importin subunit alpha-6; Karyopherin subunit alpha-5", "protein_names_refseq": "importin subunit alpha-6; karyopherin subunit alpha-5", "tax_id": 7955, "disease": "", "pathway": " (dre:553205)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095356.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505375, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095356.1. On Jul 6, 2005 this sequence version replaced XP_700819.1., [RefSeq]; Functions in nuclear protein import., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008139 nuclear localization sequence binding;GO:0061608 nuclear import signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0042564 NLS-dependent protein nuclear import complex", "go_biological_process": "GO:0048513 animal organ development;GO:0006607 NLS-bearing protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q503E9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503F2-1", "uniprot_id": [ { "id": "BARX1_DANRE", "url": "https://www.uniprot.org/uniprot/Q503F2", "type": "external" } ], "mass": 27558.0, "length": 248, "protein_name": "Homeobox protein BarH-like 1", "gene_name": "barx1", "organism": "Zebrafish", "refseq_name": "homeobox protein BarH-like 1", "refseq_ac": [ { "id": "NP_001020120", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001020120", "type": "external" } ], "gene_names_uniprotkb": "barx1; barh4", "gene_names_refseq": "BarH4; barx1; zgc:110654", "protein_names_uniprotkb": "Homeobox protein BarH-like 1; BarH-class homeodomain transcription factor 4", "protein_names_refseq": "BarH-like homeobox 1; barH-class homeodomain transcription factor 4; homeobox protein BarH-like 1", "tax_id": 7955, "disease": "", "pathway": " (dre:553644)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095353.1, BC133991.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095353.1. On Oct 24, 2007 this sequence version replaced NP_001018139.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Transcription factor, is involved in craniofacial development, and in stomach organogenesis., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A3KNS7;Q53B62", "ec_number_list": [], "go_molecular_function": "GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0060037 pharyngeal system development;GO:0051216 cartilage development;GO:0002053 positive regulation of mesenchymal cell proliferation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503F2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503G8-1", "uniprot_id": [ { "id": "S38A6_DANRE", "url": "https://www.uniprot.org/uniprot/Q503G8", "type": "external" } ], "mass": 49099.0, "length": 449, "protein_name": "Probable sodium-coupled neutral amino acid transporter 6", "gene_name": "slc38a6", "organism": "Zebrafish", "refseq_name": "probable sodium-coupled neutral amino acid transporter 6", "refseq_ac": [ { "id": "NP_001018308", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018308", "type": "external" } ], "gene_names_uniprotkb": "slc38a6; wu:fa94c12; wu:fb95f08; zgc:110611", "gene_names_refseq": "slc38a6; wu:fa94c12; wu:fb95f08; zgc:110611", "protein_names_uniprotkb": "Probable sodium-coupled neutral amino acid transporter 6; Na(+)-coupled neutral amino acid transporter 6; Solute carrier family 38 member 6", "protein_names_refseq": "Na(+)-coupled neutral amino acid transporter 6; probable sodium-coupled neutral amino acid transporter 6", "tax_id": 7955, "disease": "", "pathway": " (dre:336741)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095334.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505381, SAMEA3505382 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095334.1., [RefSeq]; Probable sodium-dependent amino acid/proton antiporter, could be a neuronal transporter for glutamate., [UniProtKB, UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 4, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015186 L-glutamine transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006868 glutamine transport;GO:0006814 sodium ion transport;GO:0003333 amino acid transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503G8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503I2-1", "uniprot_id": [ { "id": "TRI13_DANRE", "url": "https://www.uniprot.org/uniprot/Q503I2", "type": "external" } ], "mass": 45867.0, "length": 404, "protein_name": "Tripartite motif-containing 13", "gene_name": "trim13", "organism": "Zebrafish", "refseq_name": "tripartite motif-containing 13", "refseq_ac": [ { "id": "NP_001018439", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018439", "type": "external" } ], "gene_names_uniprotkb": "trim13; zgc:110578", "gene_names_refseq": "trim13; zgc:110578", "protein_names_uniprotkb": "Tripartite motif-containing 13", "protein_names_refseq": "tripartite motif-containing 13", "tax_id": 7955, "disease": "", "pathway": " (dre:553630); (R-DRE-3899300); (R-DRE-9843940)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095319.1, SRR32588726.28508336.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: lack of evidence for use of upstream AUG ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1. On Jul 6, 2005 this sequence version replaced XP_701877.1., [RefSeq]; E3 ubiquitin ligase involved in the retrotranslocation and turnover of membrane and secretory proteins from the ER through a set of processes named ER-associated degradation (ERAD). This process acts on misfolded proteins as well as in the regulated degradation of correctly folded proteins (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1R8C7", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0016874 ligase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q503I2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503J2-1", "uniprot_id": [ { "id": "MTU1_DANRE", "url": "https://www.uniprot.org/uniprot/Q503J2", "type": "external" } ], "mass": 47564.0, "length": 416, "protein_name": "Mitochondrial tRNA-specific 2-thiouridylase 1", "gene_name": "trmu", "organism": "Zebrafish", "refseq_name": "mitochondrial tRNA-specific 2-thiouridylase 1", "refseq_ac": [ { "id": "NP_001018435", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018435", "type": "external" } ], "gene_names_uniprotkb": "trmu; mtu1; zgc:110555", "gene_names_refseq": "mut1; trmu; zgc:110555", "protein_names_uniprotkb": "Mitochondrial tRNA-specific 2-thiouridylase 1; 2.8.1.14", "protein_names_refseq": "mitochondrial tRNA-specific 2-thiouridylase 1", "tax_id": 7955, "disease": "infantile liver failure syndrome (Disease Ontology:DOID:0080716); transient infantile liver failure (Disease Ontology:DOID:0080778); aminoglycoside-induced deafness (Disease Ontology:DOID:0111734); inner ear disease (Disease Ontology:DOID:2952); MERRF syndrome (Disease Ontology:DOID:310); liver disease (Disease Ontology:DOID:409)", "pathway": " (dre:553625)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095308.1, BC164518.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095308.1. On Jul 6, 2005 this sequence version replaced XP_701872.1., [RefSeq]; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of mitochondrial tRNA(Lys), tRNA(Glu) and tRNA(Gln). Required for the formation of 5-taurinomethyl-2-thiouridine (tm5s2U) of mitochondrial tRNA(Lys), tRNA(Glu), and tRNA(Gln) at the wobble position. ATP is required to activate the C2 atom of the wobble base., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.8.1.14", "url": "https://www.rhea-db.org/rhea/?query=ec:2.8.1.14", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0000049 tRNA binding;GO:0061708 tRNA-5-taurinomethyluridine 2-sulfurtransferase", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0002143 tRNA wobble position uridine thiolation;GO:0070903 mitochondrial tRNA thio-modification", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503J2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503L9-1", "uniprot_id": [ { "id": "NXN_DANRE", "url": "https://www.uniprot.org/uniprot/Q503L9", "type": "external" } ], "mass": 47410.0, "length": 418, "protein_name": "Nucleoredoxin", "gene_name": "nxn", "organism": "Zebrafish", "refseq_name": "nucleoredoxin", "refseq_ac": [ { "id": "NP_001018431", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018431", "type": "external" } ], "gene_names_uniprotkb": "nxn; zgc:110449", "gene_names_refseq": "ns:zf-es94; nxn; zgc:110449", "protein_names_uniprotkb": "Nucleoredoxin; 1.8.1.8", "protein_names_refseq": "nucleoredoxin", "tax_id": 7955, "disease": "autosomal recessive Robinow syndrome 2 (Disease Ontology:DOID:0060974)", "pathway": " (dre:553621)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095273.1, EE716867.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505371, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095273.1., [RefSeq]; Functions as a redox-dependent negative regulator of the Wnt signaling pathway., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.8.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.1.8", "type": "external" } ], "go_molecular_function": "GO:0004791 thioredoxin-disulfide reductase (NADPH) activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0072359 circulatory system development;GO:0030154 cell differentiation;GO:0016055 Wnt signaling pathway;GO:0030178 negative regulation of Wnt signaling pathway;GO:0031397 negative regulation of protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503L9-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503N9-1", "uniprot_id": [ { "id": "TAD2B_DANRE", "url": "https://www.uniprot.org/uniprot/Q503N9", "type": "external" } ], "mass": 53719.0, "length": 486, "protein_name": "Transcriptional adapter 2-beta", "gene_name": "tada2b", "organism": "Zebrafish", "refseq_name": "transcriptional adapter 2-beta", "refseq_ac": [ { "id": "NP_001019614", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001019614", "type": "external" } ], "gene_names_uniprotkb": "tada2b; zgc:110397", "gene_names_refseq": "tada2b; wu:fb72h11; wu:fi12b07; wu:fi33a06; zgc:110397", "protein_names_uniprotkb": "Transcriptional adapter 2-beta", "protein_names_refseq": "transcriptional adapter 2-beta; transcriptional adaptor 2 (ADA2 homolog, yeast)-beta", "tax_id": 7955, "disease": "", "pathway": " (dre:554156); (R-DRE-5689880)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095241.1, BC165604.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095241.1. On Sep 23, 2008 this sequence version replaced XP_687504.3., [RefSeq]; Transcriptional coactivator., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B5DDS4;Q7SXK2", "ec_number_list": [], "go_molecular_function": "GO:0003682 chromatin binding;GO:0003713 transcription coactivator activity;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0070461 SAGA-type complex;GO:0005634 nucleus", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503N9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503Q1-1", "uniprot_id": [ { "id": "MIEAP_DANRE", "url": "https://www.uniprot.org/uniprot/Q503Q1", "type": "external" } ], "mass": 55450.0, "length": 490, "protein_name": "Mitochondria-eating protein", "gene_name": "spata18", "organism": "Zebrafish", "refseq_name": "mitochondria-eating protein", "refseq_ac": [ { "id": "NP_001018198", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018198", "type": "external" } ], "gene_names_uniprotkb": "spata18; im:7140046; mieap; si:ch73-16a12.2; zgc:110352", "gene_names_refseq": "im:7140046; spata18; zgc:110352", "protein_names_uniprotkb": "Mitochondria-eating protein; Spermatogenesis-associated protein 18", "protein_names_refseq": "Spetex-1; mitochondria-eating protein; spermatogenesis-associated protein 18 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:497395)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095228.1, BC165612.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095228.1., [RefSeq]; Key regulator of mitochondrial quality that mediates the repairing or degradation of unhealthy mitochondria in response to mitochondrial damage. Mediator of mitochondrial protein catabolic process (also named MALM) by mediating the degradation of damaged proteins inside mitochondria by promoting the accumulation in the mitochondrial matrix of hydrolases that are characteristic of the lysosomal lumen. Also involved in mitochondrion degradation of damaged mitochondria by promoting the formation of vacuole-like structures (named MIV), which engulf and degrade unhealthy mitochondria by accumulating lysosomes. Binds cardiolipin. May form molecular condensates (non-membrane-bounded organelles) within mitochondria that compartmentalize and promote cardiolipin metabolism., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A5WWB1", "ec_number_list": [], "go_molecular_function": "GO:1901612 cardiolipin binding;GO:0008289 lipid binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005739 mitochondrion;GO:0005741 mitochondrial outer membrane;GO:0005759 mitochondrial matrix;GO:0043231 intracellular membrane-bounded organelle", "go_biological_process": "GO:0048545 response to steroid hormone;GO:0035694 mitochondrial protein catabolic process;GO:0035695 mitophagy by internal vacuole formation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q503Q1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503S6-1", "uniprot_id": [ { "id": "LTOR3_DANRE", "url": "https://www.uniprot.org/uniprot/Q503S6", "type": "external" } ], "mass": 13677.0, "length": 124, "protein_name": "Ragulator complex protein LAMTOR3", "gene_name": "lamtor3", "organism": "Zebrafish", "refseq_name": "ragulator complex protein LAMTOR3", "refseq_ac": [ { "id": "NP_001018410", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018410", "type": "external" } ], "gene_names_uniprotkb": "lamtor3; mapksp1; zgc:110207", "gene_names_refseq": "lamtor3; mapksp1; zgc:110207", "protein_names_uniprotkb": "Ragulator complex protein LAMTOR3; Late endosomal/lysosomal adaptor and MAPK and MTOR activator 3; Mitogen-activated protein kinase scaffold protein 1", "protein_names_refseq": "MAPK scaffold protein 1; late endosomal/lysosomal adaptor and MAPK and MTOR activator 3; mitogen-activated protein kinase kinase 1-interacting protein 1; mitogen-activated protein kinase scaffold protein 1; ragulator complex protein LAMTOR3", "tax_id": 7955, "disease": "", "pathway": " (dre:553597); (R-DRE-1632852); (R-DRE-165159); (R-DRE-166208); (R-DRE-380972); (R-DRE-5628897); (R-DRE-5674135); (R-DRE-6798695); (R-DRE-8943724); (R-DRE-9639288)", "pathway_count": 10, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH570553.1, GDQQ01015629.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505385, SAMEA3505387 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## CDS uses downstream in-frame AUG :: lack of evidence for use of upstream AUG ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On Jun 24, 2024 this sequence version replaced NP_001018410.1., [RefSeq]; As part of the Ragulator complex it is involved in amino acid sensing and activation of mTORC1, a signaling complex promoting cell growth in response to growth factors, energy levels, and amino acids. Activated by amino acids through a mechanism involving the lysosomal V-ATPase, the Ragulator plays a dual role for the small GTPases Rag (RagA/RRAGA, RagB/RRAGB, RagC/RRAGC and/or RagD/RRAGD): it (1) acts as a guanine nucleotide exchange factor (GEF), activating the small GTPases Rag and (2) mediates recruitment of Rag GTPases to the lysosome membrane. Activated Ragulator and Rag GTPases function as a scaffold recruiting mTORC1 to lysosomes where it is in turn activated., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:0071986 Ragulator complex", "go_biological_process": "GO:1904263 positive regulation of TORC1 signaling;GO:0032008 positive regulation of TOR signaling;GO:0008104 intracellular protein localization;GO:0071230 cellular response to amino acid stimulus;GO:0032006 regulation of TOR signaling", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "Q503S6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503U3-1", "uniprot_id": [ { "id": "MFFA_DANRE", "url": "https://www.uniprot.org/uniprot/Q503U3", "type": "external" } ], "mass": 31360.0, "length": 275, "protein_name": "Mitochondrial fission factor homolog A", "gene_name": "mffb", "organism": "Zebrafish", "refseq_name": "mitochondrial fission factor homolog A", "refseq_ac": [ { "id": "NP_001018402", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018402", "type": "external" } ], "gene_names_uniprotkb": "mffb; im:5082098; zgc:110130", "gene_names_refseq": "im:5082098; mffb; zgc:110130", "protein_names_uniprotkb": "Mitochondrial fission factor homolog A", "protein_names_refseq": "mitochondrial fission factor homolog A", "tax_id": 7955, "disease": "encephalopathy due to defective mitochondrial and peroxisomal fission 2 (Disease Ontology:DOID:0060994); transient cerebral ischemia (Disease Ontology:DOID:224)", "pathway": " (dre:553588)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095179.1, EH435640.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505377 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH581332.1, EH441507.1, BC095179.1 and EH461639.1. On Mar 21, 2009 this sequence version replaced NP_001018402.1., [RefSeq]; Plays a role in mitochondrial and peroxisomal fission. Promotes the recruitment and association of the fission mediator dynamin-related protein 1 (DNM1L) to the mitochondrial surface (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042803 protein homodimerization activity", "go_cellular_component": "GO:0005741 mitochondrial outer membrane;GO:0005777 peroxisome", "go_biological_process": "GO:0006626 protein targeting to mitochondrion;GO:0000266 mitochondrial fission;GO:0090141 positive regulation of mitochondrial fission;GO:0090314 positive regulation of protein targeting to membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503U3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503V0-1", "uniprot_id": [ { "id": "CHMP6_DANRE", "url": "https://www.uniprot.org/uniprot/Q503V0", "type": "external" } ], "mass": 23980.0, "length": 206, "protein_name": "Charged multivesicular body protein 6", "gene_name": "chmp6", "organism": "Zebrafish", "refseq_name": "charged multivesicular body protein 6", "refseq_ac": [ { "id": "NP_001003874", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001003874", "type": "external" } ], "gene_names_uniprotkb": "chmp6; chmp6l", "gene_names_refseq": "chmp6b; chmp6l; chmp6; flj11749l; wu:fb79d02; zgc:110067", "protein_names_uniprotkb": "Charged multivesicular body protein 6; Chromatin-modifying protein 6", "protein_names_refseq": "charged multivesicular body protein 6; chromatin modifying protein 6, like; chromatin modifying protein 6b; chromatin-modifying protein 6", "tax_id": 7955, "disease": "", "pathway": " (dre:445397); (R-DRE-1632852); (R-DRE-917729); (R-DRE-9668328)", "pathway_count": 4, "publication_count": 1, "publication_id_list": "15256591", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: AY648810.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from AY648810.1., [RefSeq]; Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. In the ESCRT-III complex, it probably serves as an acceptor for the ESCRT-II complex on endosomal membranes (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q6DRE9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000815 ESCRT III complex;GO:0005635 nuclear envelope;GO:0031902 late endosome membrane;GO:0005771 multivesicular body", "go_biological_process": "GO:0031468 nuclear membrane reassembly;GO:0015031 protein transport;GO:0006900 vesicle budding from membrane;GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q503V0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503W7-1", "uniprot_id": [ { "id": "ATD1B_DANRE", "url": "https://www.uniprot.org/uniprot/Q503W7", "type": "external" } ], "mass": 41094.0, "length": 362, "protein_name": "Outer mitochondrial transmembrane helix translocase", "gene_name": "atad1b", "organism": "Zebrafish", "refseq_name": "outer mitochondrial transmembrane helix translocase", "refseq_ac": [ { "id": "NP_001019592", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001019592", "type": "external" } ], "gene_names_uniprotkb": "atad1b; si:bz1g13.1; zgc:110042", "gene_names_refseq": "atad1b; atad1; bZ1G13.1; si:bz1g13.1; wu:fc15a10; zgc:110042", "protein_names_uniprotkb": "Outer mitochondrial transmembrane helix translocase; 7.4.2.-; ATPase family AAA domain-containing protein 1-B", "protein_names_refseq": "ATPase family AAA domain-containing protein 1-B; outer mitochondrial transmembrane helix translocase", "tax_id": 7955, "disease": "hyperekplexia 4 (Disease Ontology:DOID:0080581)", "pathway": " (dre:368412); (R-DRE-9603798)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095151.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505381 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095151.1., [RefSeq]; Outer mitochondrial translocase required to remove mislocalized tail-anchored transmembrane proteins on mitochondria (By similarity). Specifically recognizes and binds tail-anchored transmembrane proteins: acts as a dislocase that mediates the ATP-dependent extraction of mistargeted tail-anchored transmembrane proteins from the mitochondrion outer membrane (By similarity). Also plays a critical role in regulating the surface expression of AMPA receptors (AMPAR), thereby regulating synaptic plasticity and learning and memory (By similarity)., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5SQM1", "ec_number_list": [ { "id": "3.1.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.2.-", "type": "external" }, { "id": "7.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.-", "type": "external" }, { "id": "7.4.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:7.4.2.-", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0140567 membrane protein dislocase activity", "go_cellular_component": "GO:0005741 mitochondrial outer membrane;GO:0005778 peroxisomal membrane;GO:0045211 postsynaptic membrane", "go_biological_process": "GO:0009653 anatomical structure morphogenesis;GO:0140570 extraction of mislocalized protein from mitochondrial outer membrane", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q503W7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q503Y7-1", "uniprot_id": [ { "id": "PIN4_DANRE", "url": "https://www.uniprot.org/uniprot/Q503Y7", "type": "external" } ], "mass": 13664.0, "length": 128, "protein_name": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4", "gene_name": "pin4", "organism": "Zebrafish", "refseq_name": "peptidyl-prolyl cis-trans isomerase NIMA-interacting 4", "refseq_ac": [ { "id": "NP_001018389", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018389", "type": "external" } ], "gene_names_uniprotkb": "pin4; zgc:110008", "gene_names_refseq": "pin4; zgc:110008", "protein_names_uniprotkb": "Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4; 5.2.1.8; PPIase Pin4; Par14; Parvulin-14; Peptidyl-prolyl cis-trans isomerase Pin4; Rotamase Pin4", "protein_names_refseq": "PPIase Pin4; par14; parvulin-14; peptidyl-prolyl cis-trans isomerase NIMA-interacting 4; peptidyl-prolyl cis-trans isomerase Pin4; rotamase Pin4", "tax_id": 7955, "disease": "", "pathway": " (dre:553574)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095126.1, CO353877.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095126.1., [RefSeq]; May be involved as a ribosomal RNA processing factor in ribosome biogenesis. Binds to DNA (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" } ], "go_molecular_function": "GO:0003677 DNA binding;GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005730 nucleolus;GO:0005737 cytoplasm;GO:0005819 spindle", "go_biological_process": "GO:0006364 rRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q503Y7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q504C1-1", "uniprot_id": [ { "id": "LRIT2_DANRE", "url": "https://www.uniprot.org/uniprot/Q504C1", "type": "external" } ], "mass": 62615.0, "length": 561, "protein_name": "Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2", "gene_name": "lrit2", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2 precursor", "refseq_ac": [ { "id": "NP_001018372", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018372", "type": "external" } ], "gene_names_uniprotkb": "lrit2; zgc:109962", "gene_names_refseq": "lrit2; zgc:109962", "protein_names_uniprotkb": "Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2", "protein_names_refseq": "leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2 precursor; leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:553557)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC095086.1, CU468740.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505372, SAMEA3505375 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC095086.1. On Oct 14, 2011 this sequence version replaced NP_001018372.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0043010 camera-type eye development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q504C1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q50D79-1", "uniprot_id": [ { "id": "UNC4_DANRE", "url": "https://www.uniprot.org/uniprot/Q50D79", "type": "external" } ], "mass": 51726.0, "length": 470, "protein_name": "Homeobox protein unc-4 homolog", "gene_name": "uncx", "organism": "Zebrafish", "refseq_name": "homeobox protein unc-4 homolog", "refseq_ac": [ { "id": "NP_001018616", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018616", "type": "external" } ], "gene_names_uniprotkb": "uncx; uncx4.1", "gene_names_refseq": "uncx4.1; uncx", "protein_names_uniprotkb": "Homeobox protein unc-4 homolog; Homeobox protein Uncx4.1", "protein_names_refseq": "homeobox protein Uncx4.1; homeobox protein unc-4 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:553947)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "15889082", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC116499.1, AY881012.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC116499.1. On May 21, 2006 this sequence version replaced NP_001018616.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Transcription factor involved in somitogenesis and neurogenesis., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1JQ36", "ec_number_list": [], "go_molecular_function": "GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:1990837 sequence-specific double-stranded DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0007399 nervous system development;GO:0030154 cell differentiation;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q50D79-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q566M8-1", "uniprot_id": [ { "id": "RN150_DANRE", "url": "https://www.uniprot.org/uniprot/Q566M8", "type": "external" } ], "mass": 46350.0, "length": 419, "protein_name": "RING finger protein 150", "gene_name": "rnf150", "organism": "Zebrafish", "refseq_name": "RING finger protein 150 precursor", "refseq_ac": [ { "id": "NP_001017554", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017554", "type": "external" } ], "gene_names_uniprotkb": "rnf150; zgc:92168", "gene_names_refseq": "rnf150b; rnf150; zgc:92168", "protein_names_uniprotkb": "RING finger protein 150", "protein_names_refseq": "RING finger protein 150 precursor; ring finger protein 150", "tax_id": 7955, "disease": "", "pathway": " (dre:792211)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093448.1, SRR26395017.372584.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000023.1. On or before Aug 31, 2013 this sequence version replaced XP_005174206.1, XP_696604.1. Sequence Note:., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q566M8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q566N0-1", "uniprot_id": [ { "id": "ENPP4_DANRE", "url": "https://www.uniprot.org/uniprot/Q566N0", "type": "external" } ], "mass": 51603.0, "length": 459, "protein_name": "Bis(5'-adenosyl)-triphosphatase enpp4", "gene_name": "enpp4", "organism": "Zebrafish", "refseq_name": "bis(5'-adenosyl)-triphosphatase enpp4 precursor", "refseq_ac": [ { "id": "NP_001017887", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017887", "type": "external" } ], "gene_names_uniprotkb": "enpp4; E-NPP 4; zgc:113299", "gene_names_refseq": "E-NPP 4; enpp4; zgc:113299", "protein_names_uniprotkb": "Bis(5'-adenosyl)-triphosphatase enpp4; 3.6.1.29; AP3A hydrolase; AP3Aase; E-NPP 4; Ectonucleotide pyrophosphatase/phosphodiesterase family member 4; NPP-4", "protein_names_refseq": "AP3A hydrolase; AP3Aase; E-NPP4; NPP-4; bis(5'-adenosyl)-triphosphatase enpp4 precursor; bis(5'-adenosyl)-triphosphatase enpp4; ectonucleotide pyrophosphatase/phosphodiesterase family member 4", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-6798695)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093443.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA4476732, SAMEA4476734 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093443.1., [RefSeq]; Hydrolyzes extracellular Ap3A into AMP and ADP, and Ap4A into AMP and ATP. Ap3A and Ap4A are diadenosine polyphosphates thought to induce proliferation of vascular smooth muscle cells. Acts as a procoagulant, mediating platelet aggregation at the site of nascent thrombus via release of ADP from Ap3A and activation of ADP receptors (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 7, "predicted_n_glycosites": 7, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 7, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.6.1.29", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.29", "type": "external" }, { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0047710 bis(5'-adenosyl)-triphosphatase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q566N0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q566R7-1", "uniprot_id": [ { "id": "DS22B_DANRE", "url": "https://www.uniprot.org/uniprot/Q566R7", "type": "external" } ], "mass": 20631.0, "length": 183, "protein_name": "Dual specificity protein phosphatase 22-B", "gene_name": "dusp22b", "organism": "Zebrafish", "refseq_name": "dual specificity protein phosphatase 22-B", "refseq_ac": [ { "id": "NP_001017742", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017742", "type": "external" } ], "gene_names_uniprotkb": "dusp22b; ch73-170d1.1; dusp22; si:ch73-170d1.1; zgc:112536", "gene_names_refseq": "ch73-170d1.1; dusp22b; dusp22; zgc:112536", "protein_names_uniprotkb": "Dual specificity protein phosphatase 22-B; 3.1.3.16; 3.1.3.48", "protein_names_refseq": "dual specificity phosphatase 22 like; dual specificity protein phosphatase 22-B", "tax_id": 7955, "disease": "", "pathway": " (dre:100002272)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588714.33797985.1, SRR32588718.38095441.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EB967224.1, BC093370.1, EB910392.1 and JBMGRA010000002.1. On or before May 9, 2009 this sequence version replaced NP_001122025.1, NP_001017742.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Activates the Jnk signaling pathway. Dephosphorylates and deactivates p38 and stress-activated protein kinase/c-Jun N-terminal kinase (SAPK/JNK) (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A8B8L3", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.21", "type": "external" } ], "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:1990782 protein tyrosine kinase binding;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0007165 signal transduction;GO:0030155 regulation of cell adhesion;GO:0071363 cellular response to growth factor stimulus;GO:0050860 negative regulation of T cell receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q566R7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q566S6-1", "uniprot_id": [ { "id": "PEXRP_DANRE", "url": "https://www.uniprot.org/uniprot/Q566S6", "type": "external" } ], "mass": 33348.0, "length": 309, "protein_name": "Peroxisomal reductase activating PPAR-gamma", "gene_name": "dhrs7b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "dhrs7b; sdr32c1; zgc:112518", "gene_names_refseq": "", "protein_names_uniprotkb": "Peroxisomal reductase activating PPAR-gamma; 1.1.1.101; Dehydrogenase/reductase SDR family member 7B; PexRAP; Protein SDR32C1; Short-chain dehydrogenase/reductase family 32C member 1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:550454); (R-DRE-75896)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Reductase required for adipogenesis and activation of PPARG nuclear receptor. Can convert acyl and alkyl dihydroxyacetone-phosphate (DHAP) into glycerolipids and ether lipids, respectively, synthesizing ether-linked phospholipids that act as agonists for PPARG., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.1.1.101", "url": "https://www.rhea-db.org/rhea/?query=ec:1.1.1.101", "type": "external" } ], "go_molecular_function": "GO:0000140 acylglycerone-phosphate reductase (NADP+) activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005778 peroxisomal membrane;GO:0016020 membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0006629 lipid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q566S6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q566U4-1", "uniprot_id": [ { "id": "KFA_DANRE", "url": "https://www.uniprot.org/uniprot/Q566U4", "type": "external" } ], "mass": 32412.0, "length": 293, "protein_name": "Kynurenine formamidase", "gene_name": "afmid", "organism": "Zebrafish", "refseq_name": "kynurenine formamidase", "refseq_ac": [ { "id": "NP_001017677", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017677", "type": "external" } ], "gene_names_uniprotkb": "afmid; AFMID; FKF; KFA; im:7148587; zgc:112472", "gene_names_refseq": "FKF; KFA; afmid; im:7148587; zgc:112472", "protein_names_uniprotkb": "Kynurenine formamidase; 3.5.1.9; Arylformamidase; FKF; KFA; KFase; N-formylkynurenine formamidase", "protein_names_refseq": "KF; kynurenine formamidase; probable arylformamidase", "tax_id": 7955, "disease": "", "pathway": " (dre:550372)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093330.1, EE712738.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505378 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093330.1., [RefSeq]; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L-kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Kynurenine may be further oxidized to nicotinic acid, NAD(H) and NADP(H). Required for elimination of toxic metabolites., [UniProtKB, HAMAP, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.5.1.9", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.9", "type": "external" } ], "go_molecular_function": "GO:0004061 arylformamidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0019441 L-tryptophan catabolic process to kynurenine;GO:0034354 'de novo' NAD+ biosynthetic process from L-tryptophan", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q566U4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q566W7-1", "uniprot_id": [ { "id": "SNX30_DANRE", "url": "https://www.uniprot.org/uniprot/Q566W7", "type": "external" } ], "mass": 49470.0, "length": 430, "protein_name": "Sorting nexin-30", "gene_name": "snx30", "organism": "Zebrafish", "refseq_name": "sorting nexin-30", "refseq_ac": [ { "id": "NP_001017798", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017798", "type": "external" } ], "gene_names_uniprotkb": "snx30; zgc:112424", "gene_names_refseq": "snx30; zgc:112424", "protein_names_uniprotkb": "Sorting nexin-30", "protein_names_refseq": "sorting nexin-30", "tax_id": 7955, "disease": "", "pathway": " (dre:550496)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093298.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505388, SAMEA3505391 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093298.1., [RefSeq]; Involved in the regulation of endocytosis and in several stages of intracellular trafficking. Together with snx4, involved in autophagosome assembly., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005769 early endosome;GO:0031901 early endosome membrane;GO:0000407 phagophore assembly site", "go_biological_process": "GO:0015031 protein transport;GO:0000423 mitophagy;GO:0032456 endocytic recycling;GO:0034727 piecemeal microautophagy of the nucleus;GO:0061709 reticulophagy", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q566W7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q566Y8-1", "uniprot_id": [ { "id": "MGN_DANRE", "url": "https://www.uniprot.org/uniprot/Q566Y8", "type": "external" } ], "mass": 17223.0, "length": 147, "protein_name": "Protein mago nashi homolog", "gene_name": "magoh", "organism": "Zebrafish", "refseq_name": "protein mago nashi homolog", "refseq_ac": [ { "id": "NP_001017700", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017700", "type": "external" } ], "gene_names_uniprotkb": "magoh; ch211-216k22.5; zgc:112220", "gene_names_refseq": "magoh; zgc:112220", "protein_names_uniprotkb": "Protein mago nashi homolog", "protein_names_refseq": "mago homolog, exon junction complex core component; mago nashi; mago-nashi homolog, proliferation-associated; protein mago nashi homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:100005893); (R-DRE-159236); (R-DRE-72163); (R-DRE-975957)", "pathway_count": 4, "publication_count": 4, "publication_id_list": "15567724;23594743;32502192;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093273.1, EH505138.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093273.1. On or before Jul 6, 2005 this sequence version replaced XP_709856.1, XP_686568.1., [RefSeq]; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. The EJC is a dynamic structure consisting of core proteins and several peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. The EJC marks the position of the exon-exon junction in the mature mRNA for the gene expression machinery and the core components remain bound to spliced mRNAs throughout all stages of mRNA metabolism thereby influencing downstream processes including nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD) (By similarity)., [UniProtKB, UniProtKB]; Zebrafish rbm8a and magoh mutants reveal EJC developmental functions and new 3'UTR intron-containing NMD targets. Publication Status: Online-Only, [RefSeq, PubMed]; Zygotic mago nashi is expressed into the dorsal-marginal region during gastrulation., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016607 nuclear speck;GO:0071013 catalytic step 2 spliceosome;GO:0035145 exon-exon junction complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0006417 regulation of translation;GO:0008380 RNA splicing;GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q566Y8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q566Y9-1", "uniprot_id": [ { "id": "MPPE1_DANRE", "url": "https://www.uniprot.org/uniprot/Q566Y9", "type": "external" } ], "mass": 44068.0, "length": 381, "protein_name": "Metallophosphoesterase 1", "gene_name": "mppe1", "organism": "Zebrafish", "refseq_name": "metallophosphoesterase 1", "refseq_ac": [ { "id": "NP_001017701", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017701", "type": "external" } ], "gene_names_uniprotkb": "mppe1; pgap5; zgc:112219", "gene_names_refseq": "mppe1; zgc:112219", "protein_names_uniprotkb": "Metallophosphoesterase 1; 3.1.-.-; Post-GPI attachment to proteins factor 5", "protein_names_refseq": "metallophosphoesterase 1; post-GPI attachment to proteins factor 5", "tax_id": 7955, "disease": "", "pathway": " (dre:550396)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093272.1, CA474241.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093272.1., [RefSeq]; Metallophosphoesterase that catalyzes the removal of a side-chain ethanolamine-phosphate (EtNP) from the second mannose of the GPI-anchor protein intermediate. Participates in the glycan remodeling steps of GPI-anchor maturation to allow an efficient transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" } ], "go_molecular_function": "GO:0030145 manganese ion binding;GO:0062050 GPI-mannose ethanolamine phosphate phosphodiesterase activity", "go_cellular_component": "GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane;GO:0070971 endoplasmic reticulum exit site", "go_biological_process": "GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport;GO:0006506 GPI anchor biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q566Y9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q567G2-1", "uniprot_id": [ { "id": "WDR73_DANRE", "url": "https://www.uniprot.org/uniprot/Q567G2", "type": "external" } ], "mass": 41235.0, "length": 376, "protein_name": "Integrator complex assembly factor WDR73", "gene_name": "wdr73", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "wdr73; zgc:112071", "gene_names_refseq": "", "protein_names_uniprotkb": "Integrator complex assembly factor WDR73; WD repeat-containing protein 73", "protein_names_refseq": "", "tax_id": 7955, "disease": "Galloway-Mowat syndrome 1 (Disease Ontology:DOID:0060364)", "pathway": " (dre:550339)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "25873735", "class_list": "", "function": "Component of a multiprotein complex required for the assembly of the RNA endonuclease module of the integrator complex. Associates with ints9 and ints11 in the cytoplasm, stabilizing the ints9-ints11 heterodimer and blocking the active site of ints11. Brat1 then joins the complex and plugs the active site of ints11, leading to wdr73 release and nuclear import of ints9 and ints11., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0000922 spindle pole;GO:0005737 cytoplasm;GO:0032154 cleavage furrow", "go_biological_process": "GO:0021702 cerebellar Purkinje cell differentiation;GO:0021549 cerebellum development;GO:0031122 cytoplasmic microtubule organization;GO:0030901 midbrain development", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q567G2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q567V5-1", "uniprot_id": [ { "id": "Q567V5_DANRE", "url": "https://www.uniprot.org/uniprot/Q567V5", "type": "external" } ], "mass": 13557.0, "length": 118, "protein_name": "Small nuclear ribonucleoprotein Sm D2", "gene_name": "snrpd2", "organism": "Zebrafish", "refseq_name": "small nuclear ribonucleoprotein Sm D2", "refseq_ac": [ { "id": "NP_001017582", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017582", "type": "external" } ], "gene_names_uniprotkb": "snrpd2; im:6908977; si:dkey-113g17.2; zgc:110732", "gene_names_refseq": "im:6908977; si:dkey-113g17.2; snrpd2; zgc:110732", "protein_names_uniprotkb": "Small nuclear ribonucleoprotein Sm D2; Sm-D2; snRNP core protein D2", "protein_names_refseq": "small nuclear ribonucleoprotein Sm D2", "tax_id": 7955, "disease": "systemic lupus erythematosus (Disease Ontology:DOID:9074)", "pathway": " (dre:550244)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "20356836;24926785;27880902;33329019;40044042", "class_list": "", "function": "Plays a role in pre-mRNA splicing as a core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "B0R0Q5;F6NRC5", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005829 cytosol;GO:0097525 spliceosomal snRNP complex;GO:0005689 U12-type spliceosomal complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "Q567V5-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q567X1-1", "uniprot_id": [ { "id": "C25L1_DANRE", "url": "https://www.uniprot.org/uniprot/Q567X1", "type": "external" } ], "mass": 32343.0, "length": 282, "protein_name": "Cholesterol 25-hydroxylase-like protein 1, member 1", "gene_name": "ch25hl1.1", "organism": "Zebrafish", "refseq_name": "cholesterol 25-hydroxylase-like protein 1, member 1", "refseq_ac": [ { "id": "NP_001017865", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017865", "type": "external" } ], "gene_names_uniprotkb": "ch25hl1.1; si:dkey-24l11.8; zgc:110696", "gene_names_refseq": "Ch25h; ch25hc.1; ch25hc.2; ch25hl1.1; si:dkey-24l11.8; wu:fa92a08; zgc:110696", "protein_names_uniprotkb": "Cholesterol 25-hydroxylase-like protein 1, member 1; 1.14.99.-", "protein_names_refseq": "cholesterol 25-hydroxylase like 1, member 1; cholesterol 25-hydroxylase-like protein 1, member 1", "tax_id": 7955, "disease": "", "pathway": " (dre:336673)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092984.1, EH439418.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092984.1., [RefSeq]; May catalyze the formation of 25-hydroxycholesterol from cholesterol., [UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 1, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "Q1LX56", "ec_number_list": [], "go_molecular_function": "GO:0000254 C-4 methylsterol oxidase activity;GO:0005506 iron ion binding;GO:0008395 steroid hydroxylase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0008203 cholesterol metabolic process;GO:0016126 sterol biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q567X1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000011000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q568A0-1", "uniprot_id": [ { "id": "PKRI1_DANRE", "url": "https://www.uniprot.org/uniprot/Q568A0", "type": "external" } ], "mass": 21094.0, "length": 182, "protein_name": "PRKR-interacting protein 1 homolog", "gene_name": "prkrip1", "organism": "Zebrafish", "refseq_name": "PRKR-interacting protein 1 homolog", "refseq_ac": [ { "id": "NP_001017896", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017896", "type": "external" } ], "gene_names_uniprotkb": "prkrip1; si:dkey-93f15.1; zgc:110608", "gene_names_refseq": "prkrip1", "protein_names_uniprotkb": "PRKR-interacting protein 1 homolog", "protein_names_refseq": "PRKR interacting protein 1 (IL11 inducible); PRKR-interacting protein 1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:550595); (R-DRE-72163)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC152130.1, EH612035.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On or before May 15, 2009 this sequence version replaced NP_001096597.1, XP_701835.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Required for pre-mRNA splicing as component of the spliceosome (By similarity). Binds double-stranded RNA (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019901 protein kinase binding;GO:0004860 protein kinase inhibitor activity;GO:0003725 double-stranded RNA binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005681 spliceosomal complex", "go_biological_process": "GO:0006397 mRNA processing;GO:0008380 RNA splicing", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q568A0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q568E2-1", "uniprot_id": [ { "id": "ZN750_DANRE", "url": "https://www.uniprot.org/uniprot/Q568E2", "type": "external" } ], "mass": 68135.0, "length": 607, "protein_name": "Zinc finger protein 750", "gene_name": "znf750", "organism": "Zebrafish", "refseq_name": "zinc finger protein 750", "refseq_ac": [ { "id": "NP_001017786", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017786", "type": "external" } ], "gene_names_uniprotkb": "znf750; zgc:110351", "gene_names_refseq": "zgc:110351; znf750", "protein_names_uniprotkb": "Zinc finger protein 750", "protein_names_refseq": "protein ZNF750; zinc finger protein 750", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092893.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476792 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092893.1., [RefSeq]; Transcription factor involved in epidermis differentiation., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F1R5I0", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific;GO:1990841 promoter-specific chromatin binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0008544 epidermis development", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q568E2-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q568H3-1", "uniprot_id": [ { "id": "MD2L2_DANRE", "url": "https://www.uniprot.org/uniprot/Q568H3", "type": "external" } ], "mass": 24224.0, "length": 211, "protein_name": "Mitotic spindle assembly checkpoint protein MAD2B", "gene_name": "mad2l2", "organism": "Zebrafish", "refseq_name": "mitotic spindle assembly checkpoint protein MAD2B", "refseq_ac": [ { "id": "NP_001017595", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017595", "type": "external" } ], "gene_names_uniprotkb": "mad2l2; si:dkey-23c22.2; zgc:110299", "gene_names_refseq": "mad2l2; si:dkey-23c22.2; zgc:110299", "protein_names_uniprotkb": "Mitotic spindle assembly checkpoint protein MAD2B; MAD2-like protein 2; Mitotic arrest deficient 2-like protein 2", "protein_names_refseq": "MAD2-like protein 2; mitotic arrest deficient 2-like protein 2; mitotic spindle assembly checkpoint protein MAD2B", "tax_id": 7955, "disease": "Fanconi anemia complementation group V (Disease Ontology:DOID:0111080)", "pathway": " (dre:550258); (R-DRE-5655862); (R-DRE-5656121)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH579895.1, GDQH01031108.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Jul 24, 2025 this sequence version replaced XP_005167091.1., [RefSeq]; Adapter protein able to interact with different proteins and involved in different biological processes. Mediates the interaction between the error-prone DNA polymerase zeta catalytic subunit rev3l and the inserter polymerase rev1, thereby mediating the second polymerase switching in translesion DNA synthesis. Translesion DNA synthesis releases the replication blockade of replicative polymerases, stalled in presence of DNA lesions. May also play a role in signal transduction in response to DNA damage. May regulate the activation of the anaphase promoting complex APC thereby regulating progression through the cell cycle. Through transcriptional regulation may play a role in epithelial-mesenchymal transdifferentiation (By similarity)., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005819 spindle;GO:0016035 zeta DNA polymerase complex", "go_biological_process": "GO:0006281 DNA repair;GO:0006351 DNA-templated transcription;GO:0033138 positive regulation of peptidyl-serine phosphorylation;GO:0051301 cell division;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q568H3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q568K2-1", "uniprot_id": [ { "id": "PP1RB_DANRE", "url": "https://www.uniprot.org/uniprot/Q568K2", "type": "external" } ], "mass": 13106.0, "length": 122, "protein_name": "E3 ubiquitin-protein ligase PPP1R11", "gene_name": "ppp1r11", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase PPP1R11", "refseq_ac": [ { "id": "NP_001017627", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017627", "type": "external" } ], "gene_names_uniprotkb": "ppp1r11; zgc:110245", "gene_names_refseq": "ppp1r11; wu:fj64e04; zgc:110245", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase PPP1R11; 2.3.2.27; Protein phosphatase 1 regulatory subunit 11", "protein_names_refseq": "E3 ubiquitin-protein ligase PPP1R11; protein phosphatase 1 regulatory subunit 11", "tax_id": 7955, "disease": "", "pathway": " (dre:550290)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "18307296", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092823.1, EH457113.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092823.1., [RefSeq]; Atypical E3 ubiquitin-protein ligase which ubiquitinates TLR2 at 'Lys-754' leading to its degradation by the proteasome. Inhibitor of protein phosphatase 1., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004865 protein serine/threonine phosphatase inhibitor activity;GO:0061630 ubiquitin protein ligase activity;GO:0008157 protein phosphatase 1 binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0050830 defense response to Gram-positive bacterium;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0001818 negative regulation of cytokine production", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q568K2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000001.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q568K5-1", "uniprot_id": [ { "id": "NAA40_DANRE", "url": "https://www.uniprot.org/uniprot/Q568K5", "type": "external" } ], "mass": 27356.0, "length": 237, "protein_name": "N-alpha-acetyltransferase 40", "gene_name": "naa40", "organism": "Zebrafish", "refseq_name": "N-alpha-acetyltransferase 40", "refseq_ac": [ { "id": "NP_001017632", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017632", "type": "external" } ], "gene_names_uniprotkb": "naa40; nat11; zgc:110241", "gene_names_refseq": "NatD; fc45d01; naa40; nat11; wu:fc45d01; zgc:110241", "protein_names_uniprotkb": "N-alpha-acetyltransferase 40; 2.3.1.257; N-acetyltransferase 11; N-alpha-acetyltransferase D; NatD", "protein_names_refseq": "N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog; N-acetyltransferase 11; N-alpha-acetyltransferase 40; N-alpha-acetyltransferase D; natD catalytic subunit", "tax_id": 7955, "disease": "", "pathway": " (dre:550325)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092819.1, EG574532.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092819.1., [RefSeq]; N-alpha-acetyltransferase that specifically mediates the acetylation of the N-terminal residues of histones H4 and H2A. In contrast to other N-alpha-acetyltransferase, has a very specific selectivity for histones H4 and H2A N-terminus and specifically recognizes the 'Ser-Gly-Arg-Gly sequence'., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.3.1.257", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.257", "type": "external" } ], "go_molecular_function": "GO:0010485 histone H4 acetyltransferase activity;GO:0043998 histone H2A acetyltransferase activity;GO:1990189 protein N-terminal-serine acetyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q568K5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q568N4-1", "uniprot_id": [ { "id": "T10B_DANRE", "url": "https://www.uniprot.org/uniprot/Q568N4", "type": "external" } ], "mass": 21861.0, "length": 202, "protein_name": "Mitochondrial import inner membrane translocase subunit Tim10 B", "gene_name": "timm10b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "timm10b; fxc1; tim9b; timm9b; zgc:110193", "gene_names_refseq": "", "protein_names_uniprotkb": "Mitochondrial import inner membrane translocase subunit Tim10 B; Mitochondrial import inner membrane translocase subunit Tim9 B; TIMM10B; Tim10b", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:550527); (R-DRE-1268020)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "Component of the TIM22 complex, a complex that mediates the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane. The TIM22 complex forms a twin-pore translocase that uses the membrane potential as the external driving force., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0140318 protein transporter activity", "go_cellular_component": "GO:0042719 mitochondrial intermembrane space chaperone complex;GO:0005743 mitochondrial inner membrane;GO:0042721 TIM22 mitochondrial import inner membrane insertion complex", "go_biological_process": "GO:0015031 protein transport;GO:0045039 protein insertion into mitochondrial inner membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q568N4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q568P1-1", "uniprot_id": [ { "id": "MESH1_DANRE", "url": "https://www.uniprot.org/uniprot/Q568P1", "type": "external" } ], "mass": 20296.0, "length": 180, "protein_name": "Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1", "gene_name": "hddc3", "organism": "Zebrafish", "refseq_name": "guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1", "refseq_ac": [ { "id": "NP_001017835", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017835", "type": "external" } ], "gene_names_uniprotkb": "hddc3; Mesh1; zgc:110184", "gene_names_refseq": "MESH1; hddc3; zgc:110184", "protein_names_uniprotkb": "Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1; (ppGpp)ase; 3.1.7.2; HD domain-containing protein 3; MESH1; Metazoan SpoT homolog 1; Penta-phosphate guanosine-3'-pyrophosphohydrolase", "protein_names_refseq": "(ppGpp)ase; HD domain-containing protein 3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1; metazoan SpoT homolog 1; penta-phosphate guanosine-3'-pyrophosphohydrolase", "tax_id": 7955, "disease": "", "pathway": " (dre:550533)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092780.1, EH454185.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092780.1., [RefSeq]; ppGpp hydrolyzing enzyme involved in starvation response., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.7.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.7.2", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q568P1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q568V3-1", "uniprot_id": [ { "id": "FBX50_DANRE", "url": "https://www.uniprot.org/uniprot/Q568V3", "type": "external" } ], "mass": 27256.0, "length": 237, "protein_name": "F-box only protein 50", "gene_name": "nccrp1", "organism": "Zebrafish", "refseq_name": "F-box only protein 50", "refseq_ac": [ { "id": "NP_570996", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_570996", "type": "external" } ], "gene_names_uniprotkb": "nccrp1; si:dkey-85K8.6; wu:fa93e02; wu:fb12f07; zgc:122987", "gene_names_refseq": "NCCRP-1; nccrp1; wu:fa93e02; wu:fb12f07; zgc:122987", "protein_names_uniprotkb": "F-box only protein 50; NCC receptor protein 1; NCCRP-1; Non-specific cytotoxic cell receptor protein 1", "protein_names_refseq": "F-box only protein 50; NCC receptor protein 1; NCCRP1, F-box associated domain containing; non-specific cytotoxic cell receptor protein 1; nonspecific cytotoxic cell receptor protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:30078)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "11847564;19477195;23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092704.1, EH446984.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from CV114252.1, BC092704.1 and EH559627.1. On or before Mar 12, 2008 this sequence version replaced NP_001035085.1, NP_570996.1., [RefSeq]; May promote cell proliferation., [UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A1L1Z5;A2BHA4;Q3B7F3;Q9PTD8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0036503 ERAD pathway;GO:0006516 glycoprotein catabolic process;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "Q568V3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q56A55-1", "uniprot_id": [ { "id": "MITOS_DANRE", "url": "https://www.uniprot.org/uniprot/Q56A55", "type": "external" } ], "mass": 77322.0, "length": 714, "protein_name": "Mitochondrial potassium channel ATP-binding subunit", "gene_name": "abcb8", "organism": "Zebrafish", "refseq_name": "mitochondrial potassium channel ATP-binding subunit", "refseq_ac": [ { "id": "NP_001017544", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017544", "type": "external" } ], "gene_names_uniprotkb": "abcb8; mitosur; zgc:113037", "gene_names_refseq": "MITOSUR; abcb8; zgc:113037", "protein_names_uniprotkb": "Mitochondrial potassium channel ATP-binding subunit; ABCB8; ATP-binding cassette sub-family B member 8, mitochondrial; MITOSUR; Mitochondrial sulfonylurea-receptor", "protein_names_refseq": "ATP-binding cassette sub-family B member 8, mitochondrial; mitochondrial potassium channel ATP-binding subunit; mitochondrial sulfonylurea-receptor", "tax_id": 7955, "disease": "", "pathway": " (dre:548340); (R-DRE-1369007)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC092161.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## ##RefSeq-Attributes-START## gene product(s) localized to mito. :: inferred from homology ##RefSeq-Attributes-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC092161.1., [RefSeq]; ATP-binding subunit of the mitochondrial ATP-gated potassium channel (mitoK(ATP)). Together with pore-forming subunit CCDC51/MITOK of the mitoK(ATP) channel, mediates ATP-dependent potassium currents across the mitochondrial inner membrane. An increase in ATP intracellular levels closes the channel, inhibiting K(+) transport, whereas a decrease in ATP levels enhances K(+) uptake in the mitochondrial matrix (By similarity). Plays a role in mitochondrial iron transport (By similarity). Required for maintenance of normal cardiac function, possibly by influencing mitochondrial iron export and regulating the maturation of cytosolic iron sulfur cluster-containing enzymes (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1QTQ6", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0016887 ATP hydrolysis activity;GO:0140359 ABC-type transporter activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane;GO:0016020 membrane;GO:0062157 mitochondrial ATP-gated potassium channel complex", "go_biological_process": "GO:0055085 transmembrane transport;GO:0071805 potassium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q56A55-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q58EB4-1", "uniprot_id": [ { "id": "HIBCH_DANRE", "url": "https://www.uniprot.org/uniprot/Q58EB4", "type": "external" } ], "mass": 42277.0, "length": 382, "protein_name": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial", "gene_name": "hibch", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "hibch; zgc:110824", "gene_names_refseq": "", "protein_names_uniprotkb": "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; 3.1.2.4; HIB-CoA hydrolase; HIBYL-CoA-H", "protein_names_refseq": "", "tax_id": 7955, "disease": "3-hydroxyisobutryl-CoA hydrolase deficiency (Disease Ontology:DOID:0060949); amino acid metabolic disorder (Disease Ontology:DOID:9252)", "pathway": " (dre:798364); (R-DRE-70895)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA (By similarity)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.2.4", "type": "external" } ], "go_molecular_function": "GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006574 L-valine catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "Q58EB4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q58EE9-1", "uniprot_id": [ { "id": "GFAP_DANRE", "url": "https://www.uniprot.org/uniprot/Q58EE9", "type": "external" } ], "mass": 51249.0, "length": 444, "protein_name": "Glial fibrillary acidic protein", "gene_name": "gfap", "organism": "Zebrafish", "refseq_name": "glial fibrillary acidic protein", "refseq_ac": [ { "id": "NP_571448", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_571448", "type": "external" } ], "gene_names_uniprotkb": "gfap", "gene_names_refseq": "cb345; etID36982.3; gfapl; gfap; wu:fb34h11; wu:fk42c12; xx:af506734; zgc:110485", "protein_names_uniprotkb": "Glial fibrillary acidic protein; GFAP", "protein_names_refseq": "glial fibrillary acidic protein; zrf-1 antigen", "tax_id": 7955, "disease": "stroke (Disease Ontology:DOID:0051061); COVID-19 (Disease Ontology:DOID:0080600); alcohol use disorder (Disease Ontology:DOID:1574); Alexander disease (Disease Ontology:DOID:4252); brain edema (Disease Ontology:DOID:4724); retinal disease (Disease Ontology:DOID:5679)", "pathway": " (dre:30646)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12801639", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091942.1, AY397679.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091942.1. On May 23, 2005 this sequence version replaced NP_571448.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A2VCX6;Q5YLV6;Q6NUV9;Q6TH89;Q7T2N9;Q9PW34", "ec_number_list": [], "go_molecular_function": "GO:0005200 structural constituent of cytoskeleton", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005882 intermediate filament;GO:0042995 cell projection;GO:0045098 type III intermediate filament", "go_biological_process": "GO:0045109 intermediate filament organization;GO:1904714 regulation of chaperone-mediated autophagy", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q58EE9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q58EG2-1", "uniprot_id": [ { "id": "ERLN1_DANRE", "url": "https://www.uniprot.org/uniprot/Q58EG2", "type": "external" } ], "mass": 38319.0, "length": 342, "protein_name": "Erlin-1", "gene_name": "erlin1", "organism": "Zebrafish", "refseq_name": "erlin-1", "refseq_ac": [ { "id": "NP_001014325", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001014325", "type": "external" } ], "gene_names_uniprotkb": "erlin1; si:ch211-223p8.2; zgc:110547", "gene_names_refseq": "erlin1; fa10h05; fb19h05; wu:fa10h05; wu:fb19h05; zgc:110547", "protein_names_uniprotkb": "Erlin-1; Endoplasmic reticulum lipid raft-associated protein 1", "protein_names_refseq": "erlin-1", "tax_id": 7955, "disease": "hereditary spastic paraplegia 62 (Disease Ontology:DOID:0110813); hereditary spastic paraplegia (Disease Ontology:DOID:2476)", "pathway": " (dre:541490); (R-DRE-382556); (R-DRE-9931269)", "pathway_count": 3, "publication_count": 2, "publication_id_list": "23594743;40044042", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091924.1, EH499224.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091924.1. On Jul 6, 2005 this sequence version replaced XP_701716.1., [RefSeq]; Mediates the endoplasmic reticulum-associated degradation (ERAD) of inositol 1,4,5-trisphosphate receptors (IP3Rs). Involved in regulation of cellular cholesterol homeostasis by regulation the SREBP signaling pathway. Binds cholesterol and may promote ER retention of the SCAP-SREBF complex., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0031625 ubiquitin protein ligase binding;GO:0015485 cholesterol binding", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0032991 protein-containing complex", "go_biological_process": "GO:0008203 cholesterol metabolic process;GO:0045717 negative regulation of fatty acid biosynthetic process;GO:0045541 negative regulation of cholesterol biosynthetic process;GO:0032933 SREBP signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q58EG2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q58EK4-1", "uniprot_id": [ { "id": "PARLA_DANRE", "url": "https://www.uniprot.org/uniprot/Q58EK4", "type": "external" } ], "mass": 42409.0, "length": 383, "protein_name": "Presenilin-associated rhomboid-like protein A, mitochondrial", "gene_name": "parla", "organism": "Zebrafish", "refseq_name": "presenilin-associated rhomboid-like protein A, mitochondrial precursor", "refseq_ac": [ { "id": "NP_001014320", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001014320", "type": "external" } ], "gene_names_uniprotkb": "parla; parl; zgc:112986", "gene_names_refseq": "parla; parl; zgc:112986", "protein_names_uniprotkb": "Presenilin-associated rhomboid-like protein A, mitochondrial; 3.4.21.105", "protein_names_refseq": "parlb; presenilin-associated rhomboid-like protein A, mitochondrial precursor; presenilin-associated rhomboid-like protein A, mitochondrial; presenilins-associated rhomboid-like protein, mitochondrial", "tax_id": 7955, "disease": "myopia (Disease Ontology:DOID:11830); hyperinsulinism (Disease Ontology:DOID:2018); coronary artery disease (Disease Ontology:DOID:3393); breast carcinoma (Disease Ontology:DOID:3459); Leigh disease (Disease Ontology:DOID:3652); Leber hereditary optic neuropathy (Disease Ontology:DOID:705); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:541485); (R-DRE-8949664)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "22506991", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091865.1, BC164781.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091865.1., [RefSeq]; Required for the control of apoptosis during postnatal growth. Essential for proteolytic processing of an antiapoptotic form of opa1 which prevents the release of mitochondrial cytochrome c in response to intrinsic apoptotic signals., [UniProtKB, UniProtKB]; This study demonistrated that Zebrafish Parla- and Parlb-deficiency affects dopaminergic neuron patterning and embryonic survival., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.4.21.105", "url": "https://www.rhea-db.org/rhea/?query=ec:3.4.21.105", "type": "external" } ], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0016485 protein processing;GO:0010821 regulation of mitochondrion organization", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q58EK4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q58EN8-1", "uniprot_id": [ { "id": "VP33B_DANRE", "url": "https://www.uniprot.org/uniprot/Q58EN8", "type": "external" } ], "mass": 70429.0, "length": 617, "protein_name": "Vacuolar protein sorting-associated protein 33B", "gene_name": "vps33b", "organism": "Zebrafish", "refseq_name": "vacuolar protein sorting-associated protein 33B", "refseq_ac": [ { "id": "NP_001014370", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001014370", "type": "external" } ], "gene_names_uniprotkb": "vps33b", "gene_names_refseq": "vps33b; zgc:110803", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 33B", "protein_names_refseq": "vacuolar protein sorting 33B; vacuolar protein sorting-associated protein 33B; vacuolar sorting protein 33b", "tax_id": 7955, "disease": "ARC syndrome (Disease Ontology:DOID:0050763); progressive familial intrahepatic cholestasis (Disease Ontology:DOID:0070221); arthrogryposis multiplex congenita (Disease Ontology:DOID:0080954); arthrogryposis, renal dysfunction, and cholestasis 1 (Disease Ontology:DOID:0111353); cholestasis (Disease Ontology:DOID:13580); kidney disease (Disease Ontology:DOID:557)", "pathway": " (dre:541534)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16284120;20190753;22465374;23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091824.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091824.1., [RefSeq]; Findings identify vps33b is a novel downstream target gene of the hnf6/vhnf1 pathway that regulates bile duct development in zebrafish, [RefSeq, PubMed]; Knockdown of atp6ap2 and vps33b had an additive negative effect on biliary development., [RefSeq, PubMed]; May play a role in vesicle-mediated protein trafficking to lysosomal compartments and in membrane docking/fusion reactions of late endosomes/lysosomes. Required for proper trafficking and targeting of the collagen-modifying enzyme lysyl hydroxylase 3 (LH3) to intracellular collagen (By similarity). Mediates phagolysosomal fusion in macrophages. Proposed to be involved in endosomal maturation implicating vipas39. In epithelial cells, the vps33b:vipas39 complex may play a role in the apical recycling pathway and in the maintenance of the apical-basolateral polarity (By similarity). Plays a role in bile duct development., [UniProtKB, UniProtKB, UniProtKB, PubMed, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005764 lysosome;GO:0005765 lysosomal membrane;GO:0031902 late endosome membrane;GO:0033263 CORVET complex", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016192 vesicle-mediated transport;GO:0035622 intrahepatic bile duct development", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "Q58EN8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BJ10-1", "uniprot_id": [ { "id": "PF23A_DANRE", "url": "https://www.uniprot.org/uniprot/Q5BJ10", "type": "external" } ], "mass": 33431.0, "length": 296, "protein_name": "PHD finger protein 23A", "gene_name": "phf23a", "organism": "Zebrafish", "refseq_name": "PHD finger protein 23A", "refseq_ac": [ { "id": "NP_001013517", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001013517", "type": "external" } ], "gene_names_uniprotkb": "phf23a; fb36g07; phf23; si:ch211-137i24.4; wu:fa04c06; wu:fb36g07; wu:fb71c05; zgc:112942", "gene_names_refseq": "fb36g07; phf23a; phf23; wu:fa04c06; wu:fb36g07; wu:fb71c05; zgc:112942", "protein_names_uniprotkb": "PHD finger protein 23A", "protein_names_refseq": "PHD finger protein 23A", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "23594743", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091667.1, BC163957.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505383, SAMEA4476732 [ECO:0006172] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091667.1. On Jul 6, 2005 this sequence version replaced XP_701686.1., [RefSeq]; Acts as a negative regulator of autophagy., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:1901097 negative regulation of autophagosome maturation;GO:1902902 negative regulation of autophagosome assembly;GO:0006914 autophagy;GO:0031398 positive regulation of protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "Q5BJ10-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BJC1-1", "uniprot_id": [ { "id": "SPTSA_DANRE", "url": "https://www.uniprot.org/uniprot/Q5BJC1", "type": "external" } ], "mass": 8122.0, "length": 68, "protein_name": "Serine palmitoyltransferase small subunit A", "gene_name": "sptssa", "organism": "Zebrafish", "refseq_name": "serine palmitoyltransferase small subunit A", "refseq_ac": [ { "id": "NP_001087196", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001087196", "type": "external" } ], "gene_names_uniprotkb": "sptssa; ssspta; zgc:112487", "gene_names_refseq": "sptssa; wu:fb60h11; zgc:112487", "protein_names_uniprotkb": "Serine palmitoyltransferase small subunit A; Small subunit of serine palmitoyltransferase A; ssSPTa", "protein_names_refseq": "serine palmitoyltransferase small subunit A; small subunit of serine palmitoyltransferase A; ssSPTa", "tax_id": 7955, "disease": "hereditary spastic paraplegia 90A (Disease Ontology:DOID:0070459); hereditary spastic paraplegia 90B (Disease Ontology:DOID:0070460)", "pathway": " (dre:541337); (R-DRE-1660661)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091542.1, EH547182.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505375, SAMEA4476811 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC091542.1., [RefSeq]; Component of the serine palmitoyltransferase multisubunit enzyme (SPT) that catalyzes the initial and rate-limiting step in sphingolipid biosynthesis by condensing L-serine and activated acyl-CoA (most commonly palmitoyl-CoA) to form long-chain bases. The SPT complex is composed of SPTLC1, SPTLC2 or SPTLC3 and SPTSSA or SPTSSB. Within this complex, the heterodimer consisting of SPTLC1 and SPTLC2/SPTLC3 forms the catalytic core. Within the SPT complex, SPTSSA stimulates the catalytic activity and plays a role in substrate specificity, which depends upon the overall complex composition. The SPTLC1-SPTLC2-SPTSSA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC3-SPTSSA isozyme uses both C14-CoA and C16-CoA as substrates, with a slight preference for C14-CoA. Independently of its action as a SPT component, may be involved in MBOAT7 localization to mitochondria-associated membranes, a membrane bridge between the endoplasmic reticulum and mitochondria, may hence affect MBOAT7-catalyzed incorporation of arachidonic acid into phosphatidylinositol., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0017059 serine palmitoyltransferase complex;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0046513 ceramide biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5BJC1-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "Q5BJC2-1", "uniprot_id": [ { "id": "KISHA_DANRE", "url": "https://www.uniprot.org/uniprot/Q5BJC2", "type": "external" } ], "mass": 8099.0, "length": 72, "protein_name": "Protein kish-A", "gene_name": "tmem167a", "organism": "Zebrafish", "refseq_name": "protein kish-A precursor", "refseq_ac": [ { "id": "NP_001018875", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001018875", "type": "external" } ], "gene_names_uniprotkb": "tmem167a; tmem167; zgc:112458", "gene_names_refseq": "tmem167a; tmem167; zgc:112458", "protein_names_uniprotkb": "Protein kish-A; Transmembrane protein 167A; Transmembrane protein 167", "protein_names_refseq": "protein kish-A precursor; transmembrane protein 167", "tax_id": 7955, "disease": "", "pathway": " (dre:541340)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC091541.1, GDQQ01025042.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476800, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1, EH480890.1 and BC091541.1. On Nov 19, 2009 this sequence version replaced NP_001018875.1., [RefSeq]; Involved in the early part of the secretory pathway., [UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 1, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0009306 protein secretion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "Q5BJC2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000010000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P416-1", "uniprot_id": [ { "id": "A0A8M9P416_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P416", "type": "external" } ], "mass": 56647.0, "length": 508, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC110438238", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-2-like", "refseq_ac": [ { "id": "XP_021324877", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324877", "type": "external" } ], "gene_names_uniprotkb": "LOC110438238", "gene_names_refseq": "LOC110438238", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:110438238)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021324877.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P416-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P457-1", "uniprot_id": [ { "id": "A0A8M9P457_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P457", "type": "external" } ], "mass": 113482.0, "length": 993, "protein_name": "La-related protein 1 isoform X1", "gene_name": "larp1", "organism": "Zebrafish", "refseq_name": "la-related protein 1 isoform X1", "refseq_ac": [ { "id": "XP_021324942", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324942", "type": "external" } ], "gene_names_uniprotkb": "larp1", "gene_names_refseq": "larp1", "protein_names_uniprotkb": "La-related protein 1 isoform X1", "protein_names_refseq": "la-related protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:327175)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "39190712", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0000339 RNA cap binding", "go_cellular_component": "GO:0005829 cytosol;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0048255 mRNA stabilization;GO:0045727 positive regulation of translation", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M9P457-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P478-1", "uniprot_id": [ { "id": "A0A8M9P478_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P478", "type": "external" } ], "mass": 53255.0, "length": 479, "protein_name": "RGM domain family, member D isoform X1", "gene_name": "rgmd", "organism": "Zebrafish", "refseq_name": "RGM domain family, member D isoform X1", "refseq_ac": [ { "id": "XP_021324977", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324977", "type": "external" } ], "gene_names_uniprotkb": "rgmd; fb36g11; wu:fb36g11; zgc:66326", "gene_names_refseq": "fb36g11; rgmd; wu:fb36g11; zgc:66326", "protein_names_uniprotkb": "RGM domain family, member D isoform X1", "protein_names_refseq": "RGM domain family, member D isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021324977.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015026 coreceptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0098552 side of membrane", "go_biological_process": "GO:0030509 BMP signaling pathway;GO:0010604 positive regulation of macromolecule metabolic process;GO:0080090 regulation of primary metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P478-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P5K3-1", "uniprot_id": [ { "id": "A0A8M9P5K3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P5K3", "type": "external" } ], "mass": 197427.0, "length": 1818, "protein_name": "Calmodulin-binding transcription activator 1", "gene_name": "camta1a", "organism": "Zebrafish", "refseq_name": "calmodulin-binding transcription activator 1 isoform X1", "refseq_ac": [ { "id": "XP_021325677", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325677", "type": "external" } ], "gene_names_uniprotkb": "camta1a", "gene_names_refseq": "camta1a", "protein_names_uniprotkb": "Calmodulin-binding transcription activator 1", "protein_names_refseq": "calmodulin-binding transcription activator 1 isoform X1", "tax_id": 7955, "disease": "nonprogressive cerebellar ataxia with mental retardation (Disease Ontology:DOID:0050998)", "pathway": " (dre:797322)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Transcriptional activator., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003690 double-stranded DNA binding;GO:0003712 transcription coregulator activity;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P5K3-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P5N0-1", "uniprot_id": [ { "id": "A0A8M9P5N0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P5N0", "type": "external" } ], "mass": 204992.0, "length": 1870, "protein_name": "Uncharacterized protein cdh24a isoform X1", "gene_name": "cdh24a", "organism": "Zebrafish", "refseq_name": "uncharacterized protein cdh24a isoform X1", "refseq_ac": [ { "id": "XP_021325717", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325717", "type": "external" } ], "gene_names_uniprotkb": "cdh24a", "gene_names_refseq": "cdh24a", "protein_names_uniprotkb": "Uncharacterized protein cdh24a isoform X1", "protein_names_refseq": "uncharacterized protein cdh24a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:567936)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Cadherins are calcium-dependent cell adhesion proteins., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IMG9", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0045296 cadherin binding;GO:0008013 beta-catenin binding", "go_cellular_component": "GO:0005912 adherens junction;GO:0016342 catenin complex", "go_biological_process": "GO:0016477 cell migration;GO:0000902 cell morphogenesis;GO:0007043 cell-cell junction assembly;GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0034332 adherens junction organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P5N0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P612-1", "uniprot_id": [ { "id": "A0A8M9P612_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P612", "type": "external" } ], "mass": 86995.0, "length": 745, "protein_name": "Cullin-2", "gene_name": "cul2", "organism": "Zebrafish", "refseq_name": "cullin-2", "refseq_ac": [ { "id": "XP_002666627", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002666627", "type": "external" } ], "gene_names_uniprotkb": "cul2", "gene_names_refseq": "cul2", "protein_names_uniprotkb": "Cullin-2", "protein_names_refseq": "cullin-2", "tax_id": 7955, "disease": "", "pathway": " (dre:336088); (R-DRE-1234176); (R-DRE-8951664); (R-DRE-983168)", "pathway_count": 4, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E9QCA9", "ec_number_list": [], "go_molecular_function": "GO:0031625 ubiquitin protein ligase binding;GO:0160072 ubiquitin ligase complex scaffold activity", "go_cellular_component": "GO:0031981 nuclear lumen;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0019005 SCF ubiquitin ligase complex;GO:0031462 Cul2-RING ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0001944 vasculature development;GO:0043009 chordate embryonic development;GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0140627 ubiquitin-dependent protein catabolic process via the C-end degron rule pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P612-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P680-1", "uniprot_id": [ { "id": "A0A8M9P680_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P680", "type": "external" } ], "mass": 95193.0, "length": 831, "protein_name": "V-type proton ATPase subunit a", "gene_name": "si:ch73-173p19.2", "organism": "Zebrafish", "refseq_name": "V-type proton ATPase 116 kDa subunit a 1 isoform X2", "refseq_ac": [ { "id": "XP_021326052", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326052", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-173p19.2", "gene_names_refseq": "si:ch73-173p19.2", "protein_names_uniprotkb": "V-type proton ATPase subunit a", "protein_names_refseq": "V-type proton ATPase 116 kDa subunit a 1 isoform X2", "tax_id": 7955, "disease": "autosomal recessive osteopetrosis 1 (Disease Ontology:DOID:0110942); renal tubular acidosis (Disease Ontology:DOID:14219); Parkinson's disease (Disease Ontology:DOID:14330)", "pathway": " (dre:100332691)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051117 ATPase binding;GO:0046961 proton-transporting ATPase activity, rotational mechanism", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016471 vacuolar proton-transporting V-type ATPase complex;GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain", "go_biological_process": "GO:0007035 vacuolar acidification", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P680-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P6G3-1", "uniprot_id": [ { "id": "A0A8M9P6G3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P6G3", "type": "external" } ], "mass": 91431.0, "length": 807, "protein_name": "Anoctamin", "gene_name": "ano10b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_021326182", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326182", "type": "external" } ], "gene_names_uniprotkb": "ano10b; zgc:153923", "gene_names_refseq": "ano10b; zgc:153923", "protein_names_uniprotkb": "Anoctamin", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "autosomal recessive spinocerebellar ataxia 10 (Disease Ontology:DOID:0050999)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IVK8;A0AC58IVL0;A0AC58IVL2;A0AC58IVM3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P6G3-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P6G4-1", "uniprot_id": [ { "id": "A0A8M9P6G4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P6G4", "type": "external" } ], "mass": 197561.0, "length": 1810, "protein_name": "SH3 and multiple ankyrin repeat domains protein 2b isoform X1", "gene_name": "shank2b", "organism": "Zebrafish", "refseq_name": "SH3 and multiple ankyrin repeat domains protein 2b isoform X1", "refseq_ac": [ { "id": "XP_017209578", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017209578", "type": "external" } ], "gene_names_uniprotkb": "shank2b; shank2; si:dkey-221m4.1", "gene_names_refseq": "shank2b; shank2; si:dkey-221m4.1", "protein_names_uniprotkb": "SH3 and multiple ankyrin repeat domains protein 2b isoform X1", "protein_names_refseq": "SH3 and multiple ankyrin repeat domains protein 2b isoform X1", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); autistic disorder (Disease Ontology:DOID:12849)", "pathway": " (dre:567595)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "26469318;27189481;28252024;29619162;30588557;31560986;36768529", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035255 ionotropic glutamate receptor binding;GO:0030160 synaptic receptor adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0014069 postsynaptic density;GO:0043197 dendritic spine", "go_biological_process": "GO:0008306 associative learning;GO:0050808 synapse organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A0A8M9P6G4-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P6R4-1", "uniprot_id": [ { "id": "A0A8M9P6R4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P6R4", "type": "external" } ], "mass": 247907.0, "length": 2275, "protein_name": "Neuron navigator 2 isoform X1", "gene_name": "nav2b", "organism": "Zebrafish", "refseq_name": "neuron navigator 2 isoform X1", "refseq_ac": [ { "id": "XP_021326322", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326322", "type": "external" } ], "gene_names_uniprotkb": "nav2b", "gene_names_refseq": "nav2b", "protein_names_uniprotkb": "Neuron navigator 2 isoform X1", "protein_names_refseq": "neuron navigator 2 isoform X1", "tax_id": 7955, "disease": "cerebellar hypoplasia (Disease Ontology:DOID:0070338)", "pathway": " (dre:557290)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0022008 neurogenesis;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P6R4-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P700-1", "uniprot_id": [ { "id": "A0A8M9P700_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P700", "type": "external" } ], "mass": 108806.0, "length": 931, "protein_name": "Anoctamin", "gene_name": "ano5a", "organism": "Zebrafish", "refseq_name": "anoctamin-5 isoform X1", "refseq_ac": [ { "id": "XP_021326432", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326432", "type": "external" } ], "gene_names_uniprotkb": "ano5a", "gene_names_refseq": "ano5a", "protein_names_uniprotkb": "Anoctamin", "protein_names_refseq": "anoctamin-5 isoform X1", "tax_id": 7955, "disease": "Miyoshi muscular dystrophy 3 (Disease Ontology:DOID:0070201); autosomal recessive limb-girdle muscular dystrophy type 2L (Disease Ontology:DOID:0110284); isolated elevated serum creatine phosphokinase levels (Disease Ontology:DOID:0111338); gnathodiaphyseal dysplasia (Disease Ontology:DOID:0111533)", "pathway": " (dre:100534737)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0045332 phospholipid translocation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P700-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P7X5-1", "uniprot_id": [ { "id": "A0A8M9P7X5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P7X5", "type": "external" } ], "mass": 122043.0, "length": 1082, "protein_name": "Rho guanine nucleotide exchange factor 1 isoform X1", "gene_name": "arhgef1", "organism": "Zebrafish", "refseq_name": "rho guanine nucleotide exchange factor 1 isoform X1", "refseq_ac": [ { "id": "XP_021322373", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322373", "type": "external" } ], "gene_names_uniprotkb": "arhgef1; arhgef1b; im:7155372; zgc:136551", "gene_names_refseq": "arhgef1b; arhgef1; im:7155372; zgc:136551", "protein_names_uniprotkb": "Rho guanine nucleotide exchange factor 1 isoform X1", "protein_names_refseq": "rho guanine nucleotide exchange factor 1 isoform X1", "tax_id": 7955, "disease": "immunodeficiency 62 (Disease Ontology:DOID:0111991)", "pathway": " (dre:557983)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;27910850", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0001664 G protein-coupled receptor binding;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9P7X5-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P821-1", "uniprot_id": [ { "id": "ZN574_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P821", "type": "external" } ], "mass": 110920.0, "length": 1006, "protein_name": "Zinc finger protein 574", "gene_name": "znf574", "organism": "Zebrafish", "refseq_name": "zinc finger protein 574 isoform 2", "refseq_ac": [ { "id": "NP_001428514", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001428514", "type": "external" } ], "gene_names_uniprotkb": "znf574; si:ch211-87d12.1", "gene_names_refseq": "si:ch211-87d12.1; znf574", "protein_names_uniprotkb": "Zinc finger protein 574; Zinc finger protein Rumba", "protein_names_refseq": "rumba zinc finger protein; zinc finger protein 574 isoform 2; zinc finger protein Rumba", "tax_id": 7955, "disease": "", "pathway": " (dre:798589)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "21228005;23594743;40328246", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395017.657202.1, SRR26395062.809054.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476755, SAMEA4476761 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Jun 18, 2025 this sequence version replaced XP_021322448.1., [RefSeq]; Part of a ribosome quality control that mediates surveillance of ribosome assembly and promotes degradation of ribosomes with assembly defects., [UniProtKB, UniProtKB]; Positional cloning reveals that Rumba is a novel nuclear C2H2 zinc-finger factor with unknown function and samba encodes an evolutionarily conserved protein that is homologous to human augmin complex subunit 3 (HAUS3)., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 1, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AHU8;D2KMS9;F1QUN0", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0043023 ribosomal large subunit binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0060216 definitive hemopoiesis;GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process;GO:0042256 cytosolic ribosome assembly;GO:0090069 regulation of ribosome biogenesis", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9P821-1", "record_type": "protein", "filter_code": "0000000.0100101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P891-1", "uniprot_id": [ { "id": "A0A8M9P891_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P891", "type": "external" } ], "mass": 249205.0, "length": 2285, "protein_name": "Uncharacterized protein tnxba isoform X1", "gene_name": "tnxba", "organism": "Zebrafish", "refseq_name": "uncharacterized protein tnxba isoform X1", "refseq_ac": [ { "id": "XP_021322558", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322558", "type": "external" } ], "gene_names_uniprotkb": "tnxba", "gene_names_refseq": "tnxba", "protein_names_uniprotkb": "Uncharacterized protein tnxba isoform X1", "protein_names_refseq": "uncharacterized protein tnxba isoform X1", "tax_id": 7955, "disease": "Ehlers-Danlos syndrome classic-like 1 (Disease Ontology:DOID:0080731); Ehlers-Danlos syndrome (Disease Ontology:DOID:13359); vesicoureteral reflux (Disease Ontology:DOID:9620)", "pathway": " (dre:100536295)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HJB9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0031012 extracellular matrix", "go_biological_process": "GO:0030155 regulation of cell adhesion;GO:0031175 neuron projection development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P891-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P894-1", "uniprot_id": [ { "id": "A0A8M9P894_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P894", "type": "external" } ], "mass": 31643.0, "length": 278, "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "si:ch211-51i16.1", "organism": "Zebrafish", "refseq_name": "ecto-ADP-ribosyltransferase 4", "refseq_ac": [ { "id": "XP_021327032", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327032", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-51i16.1; LOC141374980", "gene_names_refseq": "si:ch211-51i16.1", "protein_names_uniprotkb": "NAD(P)(+)--arginine ADP-ribosyltransferase; 2.4.2.31; Mono(ADP-ribosyl)transferase", "protein_names_refseq": "ecto-ADP-ribosyltransferase 4", "tax_id": 7955, "disease": "", "pathway": " (dre:100334237); (dre:141374980)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327032.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.4.2.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.2.31", "type": "external" } ], "go_molecular_function": "GO:0016779 nucleotidyltransferase activity;GO:0003950 NAD+ poly-ADP-ribosyltransferase activity;GO:0106274 NAD+-protein-arginine ADP-ribosyltransferase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P894-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P8G9-1", "uniprot_id": [ { "id": "A0A8M9P8G9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P8G9", "type": "external" } ], "mass": 227629.0, "length": 2033, "protein_name": "ribonuclease H", "gene_name": "LOC110437994", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_021322653", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322653", "type": "external" } ], "gene_names_uniprotkb": "LOC110437994", "gene_names_refseq": "LOC110437994", "protein_names_uniprotkb": "ribonuclease H; 3.1.26.4", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:110437994)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003676 nucleic acid binding;GO:0004523 RNA-DNA hybrid ribonuclease activity", "go_cellular_component": "", "go_biological_process": "GO:0015074 DNA integration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P8G9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P8T3-1", "uniprot_id": [ { "id": "A0A8M9P8T3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P8T3", "type": "external" } ], "mass": 25952.0, "length": 224, "protein_name": "NK2 transcription factor related, locus 9", "gene_name": "nkx2.9", "organism": "Zebrafish", "refseq_name": "NK2 transcription factor related, locus 9", "refseq_ac": [ { "id": "NP_001093073", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093073", "type": "external" } ], "gene_names_uniprotkb": "nkx2.9; fc92g07; wu:fc92g07; wu:fk49f03", "gene_names_refseq": "fc92g07; nkx2.9; wu:fc92g07; wu:fk49f03", "protein_names_uniprotkb": "NK2 transcription factor related, locus 9", "protein_names_refseq": "NK2 transcription factor related, locus 9; homeobox transcription factor", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162)", "pathway": " (dre:325615)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "16888327;17307034;18499750;19011630;20610488;25476803;27189481;29243319;34473348;37529101", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01028301.1, BC091676.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505380 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000017.1. On Jul 6, 2007 this sequence version replaced XP_693957.2. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0021514 ventral spinal cord interneuron differentiation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A0A8M9P8T3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P8U3-1", "uniprot_id": [ { "id": "A0A8M9P8U3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P8U3", "type": "external" } ], "mass": 116763.0, "length": 1031, "protein_name": "Connector enhancer of kinase suppressor of ras 2", "gene_name": "si:ch211-26b3.4", "organism": "Zebrafish", "refseq_name": "connector enhancer of kinase suppressor of ras 2", "refseq_ac": [ { "id": "XP_021327272", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327272", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-26b3.4", "gene_names_refseq": "si:ch211-26b3.4", "protein_names_uniprotkb": "Connector enhancer of kinase suppressor of ras 2", "protein_names_refseq": "connector enhancer of kinase suppressor of ras 2", "tax_id": 7955, "disease": "", "pathway": " (dre:568768)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F1RA47", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0009966 regulation of signal transduction;GO:0007167 enzyme-linked receptor protein signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P8U3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P8V0-1", "uniprot_id": [ { "id": "A0A8M9P8V0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P8V0", "type": "external" } ], "mass": 102246.0, "length": 946, "protein_name": "Whirlin", "gene_name": "whrnb", "organism": "Zebrafish", "refseq_name": "whirlin", "refseq_ac": [ { "id": "XP_021327282", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327282", "type": "external" } ], "gene_names_uniprotkb": "whrnb", "gene_names_refseq": "whrnb", "protein_names_uniprotkb": "Whirlin", "protein_names_refseq": "whirlin", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 31 (Disease Ontology:DOID:0110490); Usher syndrome type 2D (Disease Ontology:DOID:0110840); sensorineural hearing loss (Disease Ontology:DOID:10003)", "pathway": " (dre:100534775)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327282.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0042995 cell projection", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P8V0-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P909-1", "uniprot_id": [ { "id": "A0A8M9P909_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P909", "type": "external" } ], "mass": 72029.0, "length": 668, "protein_name": "Disabled homolog 2 isoform X1", "gene_name": "si:ch211-204c21.1", "organism": "Zebrafish", "refseq_name": "disabled homolog 2 isoform X1", "refseq_ac": [ { "id": "XP_021327347", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327347", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-204c21.1", "gene_names_refseq": "si:ch211-204c21.1", "protein_names_uniprotkb": "Disabled homolog 2 isoform X1", "protein_names_refseq": "disabled homolog 2 isoform X1", "tax_id": 7955, "disease": "metabolic acidosis (Disease Ontology:DOID:0050758); myocardial infarction (Disease Ontology:DOID:5844)", "pathway": " (dre:368323)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IU21", "ec_number_list": [], "go_molecular_function": "GO:0035615 clathrin adaptor activity;GO:0038024 cargo receptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005905 clathrin-coated pit", "go_biological_process": "GO:0030154 cell differentiation;GO:0090090 negative regulation of canonical Wnt signaling pathway;GO:0006898 receptor-mediated endocytosis;GO:0010718 positive regulation of epithelial to mesenchymal transition;GO:0045807 positive regulation of endocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P909-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P924-1", "uniprot_id": [ { "id": "A0A8M9P924_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P924", "type": "external" } ], "mass": 39897.0, "length": 354, "protein_name": "rRNA adenine N(6)-methyltransferase", "gene_name": "tfb1m", "organism": "Zebrafish", "refseq_name": "dimethyladenosine transferase 1, mitochondrial isoform X1", "refseq_ac": [ { "id": "XP_021322908", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322908", "type": "external" } ], "gene_names_uniprotkb": "tfb1m; im:7151479; zgc:153625", "gene_names_refseq": "im:7151479; tfb1m; zgc:153625", "protein_names_uniprotkb": "rRNA adenine N(6)-methyltransferase; 2.1.1.-", "protein_names_refseq": "dimethyladenosine transferase 1, mitochondrial isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003723 RNA binding;GO:1904047 S-adenosyl-L-methionine binding;GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity;GO:0034246 mitochondrial transcription factor activity", "go_cellular_component": "GO:0005759 mitochondrial matrix;GO:0005739 mitochondrion", "go_biological_process": "GO:0031167 rRNA methylation;GO:0006391 transcription initiation at mitochondrial promoter;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P924-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P971-1", "uniprot_id": [ { "id": "A0A8M9P971_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P971", "type": "external" } ], "mass": 104982.0, "length": 935, "protein_name": "Protein transport protein Sec16B isoform X1", "gene_name": "sec16b", "organism": "Zebrafish", "refseq_name": "protein transport protein Sec16B isoform X1", "refseq_ac": [ { "id": "XP_068074413", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068074413", "type": "external" } ], "gene_names_uniprotkb": "sec16b", "gene_names_refseq": "sec16b", "protein_names_uniprotkb": "Protein transport protein Sec16B isoform X1", "protein_names_refseq": "protein transport protein Sec16B isoform X1", "tax_id": 7955, "disease": "obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:553356)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P971-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PA32-1", "uniprot_id": [ { "id": "A0A8M9PA32_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PA32", "type": "external" } ], "mass": 21291.0, "length": 189, "protein_name": "Tumor protein p53-inducible protein 11", "gene_name": "tp53i11b", "organism": "Zebrafish", "refseq_name": "tumor protein p53-inducible protein 11b isoform X1", "refseq_ac": [ { "id": "XP_021323333", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323333", "type": "external" } ], "gene_names_uniprotkb": "tp53i11b; fi47b03; si:ch211-122k23.2; tp53i11; wu:fi47b03; zgc:153054", "gene_names_refseq": "fi47b03; si:ch211-122k23.2; tp53i11b; tp53i11; wu:fi47b03; zgc:153054", "protein_names_uniprotkb": "Tumor protein p53-inducible protein 11; p53-induced gene 11 protein", "protein_names_refseq": "tumor protein p53-inducible protein 11b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HTD5;A0AC58HTD9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PA32-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PAF1-1", "uniprot_id": [ { "id": "A0A8M9PAF1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PAF1", "type": "external" } ], "mass": 174802.0, "length": 1606, "protein_name": "Cadherin-24 isoform X1", "gene_name": "cdh24b", "organism": "Zebrafish", "refseq_name": "cadherin 24, type 2b isoform 2", "refseq_ac": [ { "id": "NP_001429375", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429375", "type": "external" } ], "gene_names_uniprotkb": "cdh24b", "gene_names_refseq": "cdh24b; cdh24; si:dkey-16l23.1", "protein_names_uniprotkb": "Cadherin-24 isoform X1", "protein_names_refseq": "cadherin 24, type 2b isoform 2; cadherin 24, type 2; cadherin-4", "tax_id": 7955, "disease": "", "pathway": " (dre:100007192)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588719.9377437.1, SRR32588730.14576640.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476729, SAMEA4476732 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Aug 7, 2025 this sequence version replaced XP_021323481.1., [RefSeq]; Cadherins are calcium-dependent cell adhesion proteins., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HS05;A0AC58HS56", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0045296 cadherin binding;GO:0008013 beta-catenin binding", "go_cellular_component": "GO:0005912 adherens junction;GO:0016342 catenin complex;GO:0005886 plasma membrane", "go_biological_process": "GO:0016477 cell migration;GO:0000902 cell morphogenesis;GO:0007043 cell-cell junction assembly;GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0034332 adherens junction organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PAF1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PAT6-1", "uniprot_id": [ { "id": "A0A8M9PAT6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PAT6", "type": "external" } ], "mass": 33412.0, "length": 310, "protein_name": "Chromatin target of PRMT1a isoform X1", "gene_name": "chtopa", "organism": "Zebrafish", "refseq_name": "chromatin target of PRMT1a isoform X1", "refseq_ac": [ { "id": "XP_021323668", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323668", "type": "external" } ], "gene_names_uniprotkb": "chtopa; fb17a05; wu:fb17a05; wu:fi05e09; zgc:55292", "gene_names_refseq": "chtopa; fb17a05; wu:fb17a05; wu:fi05e09; zgc:55292", "protein_names_uniprotkb": "Chromatin target of PRMT1a isoform X1", "protein_names_refseq": "chromatin target of PRMT1a isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0008327 methyl-CpG binding", "go_cellular_component": "GO:0016607 nuclear speck", "go_biological_process": "GO:0006338 chromatin remodeling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PAT6-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PBF2-1", "uniprot_id": [ { "id": "A0A8M9PBF2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PBF2", "type": "external" } ], "mass": 41432.0, "length": 361, "protein_name": "Death-associated protein kinase 2", "gene_name": "si:dkey-240h12.4", "organism": "Zebrafish", "refseq_name": "death-associated protein kinase 2", "refseq_ac": [ { "id": "XP_021323963", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323963", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-240h12.4", "gene_names_refseq": "si:dkey-240h12.4", "protein_names_uniprotkb": "Death-associated protein kinase 2", "protein_names_refseq": "death-associated protein kinase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:555536)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1QN42", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0004687 myosin light chain kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PBF2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PBG3-1", "uniprot_id": [ { "id": "A0A8M9PBG3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PBG3", "type": "external" } ], "mass": 63050.0, "length": 563, "protein_name": "peptidylprolyl isomerase", "gene_name": "fkbp10a", "organism": "Zebrafish", "refseq_name": "peptidyl-prolyl cis-trans isomerase FKBP10 isoform X1", "refseq_ac": [ { "id": "XP_009292452", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292452", "type": "external" } ], "gene_names_uniprotkb": "fkbp10a", "gene_names_refseq": "fkbp10a", "protein_names_uniprotkb": "peptidylprolyl isomerase; 5.2.1.8", "protein_names_refseq": "peptidyl-prolyl cis-trans isomerase FKBP10 isoform X1", "tax_id": 7955, "disease": "osteogenesis imperfecta type 11 (Disease Ontology:DOID:0110351)", "pathway": " (dre:799903)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; PPIases accelerate the folding of proteins during protein synthesis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IBI6;A0AC58I0G0;A0AC58I0G4", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0016853 isomerase activity;GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum", "go_biological_process": "GO:0006457 protein folding", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PBG3-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PBK2-1", "uniprot_id": [ { "id": "A0A8M9PBK2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PBK2", "type": "external" } ], "mass": 38955.0, "length": 359, "protein_name": "RNA binding protein fox-1 homolog", "gene_name": "rbfox3b", "organism": "Zebrafish", "refseq_name": "RNA binding protein fox-1 homolog 3 isoform X1", "refseq_ac": [ { "id": "XP_021328437", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328437", "type": "external" } ], "gene_names_uniprotkb": "rbfox3b", "gene_names_refseq": "rbfox3b", "protein_names_uniprotkb": "RNA binding protein fox-1 homolog", "protein_names_refseq": "RNA binding protein fox-1 homolog 3 isoform X1", "tax_id": 7955, "disease": "intellectual disability (Disease Ontology:DOID:1059); brain infarction (Disease Ontology:DOID:3454); middle cerebral artery infarction (Disease Ontology:DOID:3525)", "pathway": " (dre:559412)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; RNA-binding protein that regulates alternative splicing events., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006397 mRNA processing;GO:0007399 nervous system development;GO:0008380 RNA splicing;GO:0000381 regulation of alternative mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PBK2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PBP8-1", "uniprot_id": [ { "id": "A0A8M9PBP8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PBP8", "type": "external" } ], "mass": 496652.0, "length": 4503, "protein_name": "Protocadherin Fat 1 isoform X1", "gene_name": "fat1b", "organism": "Zebrafish", "refseq_name": "protocadherin Fat 1 isoform X1", "refseq_ac": [ { "id": "XP_021328497", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328497", "type": "external" } ], "gene_names_uniprotkb": "fat1b", "gene_names_refseq": "fat1b", "protein_names_uniprotkb": "Protocadherin Fat 1 isoform X1", "protein_names_refseq": "protocadherin Fat 1 isoform X1", "tax_id": 7955, "disease": "oral squamous cell carcinoma (Disease Ontology:DOID:0050866); facioscapulohumeral muscular dystrophy (Disease Ontology:DOID:11727); nephrotic syndrome (Disease Ontology:DOID:1184); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); lung non-small cell carcinoma (Disease Ontology:DOID:3908); lung small cell carcinoma (Disease Ontology:DOID:5409); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:565591)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005912 adherens junction", "go_biological_process": "GO:0021782 glial cell development;GO:0060041 retina development in camera-type eye;GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0009653 anatomical structure morphogenesis;GO:0044331 cell-cell adhesion mediated by cadherin", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PBP8-1", "record_type": "protein", "filter_code": "0000000.0000011.001000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PBV5-1", "uniprot_id": [ { "id": "A0A8M9PBV5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PBV5", "type": "external" } ], "mass": 190771.0, "length": 1666, "protein_name": "Intersectin-2a isoform X1", "gene_name": "itsn2a", "organism": "Zebrafish", "refseq_name": "intersectin-2a isoform X1", "refseq_ac": [ { "id": "XP_021324162", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324162", "type": "external" } ], "gene_names_uniprotkb": "itsn2a; si:dkey-266k12.1", "gene_names_refseq": "itsn2a; si:dkey-266k12.1", "protein_names_uniprotkb": "Intersectin-2a isoform X1", "protein_names_refseq": "intersectin-2a isoform X1", "tax_id": 7955, "disease": "intellectual disability (Disease Ontology:DOID:1059); nephrotic syndrome (Disease Ontology:DOID:1184)", "pathway": " (dre:566412)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "24240475;26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity;GO:0005509 calcium ion binding;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0097708 intracellular vesicle;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0042995 cell projection;GO:0098793 presynapse", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0016197 endosomal transport;GO:0150007 clathrin-dependent synaptic vesicle endocytosis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M9PBV5-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PC12-1", "uniprot_id": [ { "id": "A0A8M9PC12_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PC12", "type": "external" } ], "mass": 58415.0, "length": 512, "protein_name": "Tyrosine-protein kinase", "gene_name": "frk", "organism": "Zebrafish", "refseq_name": "tyrosine-protein kinase FRK", "refseq_ac": [ { "id": "XP_021324228", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324228", "type": "external" } ], "gene_names_uniprotkb": "frk", "gene_names_refseq": "frk", "protein_names_uniprotkb": "Tyrosine-protein kinase; 2.7.10.2", "protein_names_refseq": "tyrosine-protein kinase FRK", "tax_id": 7955, "disease": "intestinal cancer (Disease Ontology:DOID:10155); Goldenhar syndrome (Disease Ontology:DOID:2907); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:567549)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021324228.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" } ], "go_molecular_function": "GO:0004715 non-membrane spanning protein tyrosine kinase activity;GO:0005102 signaling receptor binding;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:1904888 cranial skeletal system development;GO:0007169 cell surface receptor protein tyrosine kinase signaling pathway;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PC12-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PC75-1", "uniprot_id": [ { "id": "A0A8M9PC75_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PC75", "type": "external" } ], "mass": 1001769.0, "length": 8731, "protein_name": "Nesprin-1 isoform X1", "gene_name": "syne1a", "organism": "Zebrafish", "refseq_name": "nesprin-1 isoform X1", "refseq_ac": [ { "id": "XP_021324303", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324303", "type": "external" } ], "gene_names_uniprotkb": "syne1a", "gene_names_refseq": "syne1a", "protein_names_uniprotkb": "Nesprin-1 isoform X1", "protein_names_refseq": "nesprin-1 isoform X1", "tax_id": 7955, "disease": "cerebellar ataxia (Disease Ontology:DOID:0050753); autosomal dominant Emery-Dreifuss muscular dystrophy 4 (Disease Ontology:DOID:0070249); arthrogryposis multiplex congenita (Disease Ontology:DOID:0080954); arthrogryposis multiplex congenita-3 (Disease Ontology:DOID:0080979); autosomal recessive spinocerebellar ataxia 8 (Disease Ontology:DOID:0111618); Emery-Dreifuss muscular dystrophy (Disease Ontology:DOID:11726); bipolar disorder (Disease Ontology:DOID:3312); muscular dystrophy (Disease Ontology:DOID:9884)", "pathway": " (dre:569553)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0140444 cytoskeleton-nuclear membrane anchor activity", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0031965 nuclear membrane;GO:0030017 sarcomere;GO:0016529 sarcoplasmic reticulum;GO:0005640 nuclear outer membrane", "go_biological_process": "GO:1902017 regulation of cilium assembly;GO:0051642 centrosome localization;GO:0007097 nuclear migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PC75-1", "record_type": "protein", "filter_code": "0000000.0000011.000010.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PC77-1", "uniprot_id": [ { "id": "A0A8M9PC77_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PC77", "type": "external" } ], "mass": 83447.0, "length": 768, "protein_name": "Striatin-4", "gene_name": "strn4", "organism": "Zebrafish", "refseq_name": "striatin-4", "refseq_ac": [ { "id": "XP_021321999", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021321999", "type": "external" } ], "gene_names_uniprotkb": "strn4", "gene_names_refseq": "strn4", "protein_names_uniprotkb": "Striatin-4", "protein_names_refseq": "striatin-4", "tax_id": 7955, "disease": "", "pathway": " (dre:562780)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021321999.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0030425 dendrite;GO:0043025 neuronal cell body;GO:0098794 postsynapse;GO:0090443 FAR/SIN/STRIPAK complex", "go_biological_process": "GO:0035331 negative regulation of hippo signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PC77-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PCE9-1", "uniprot_id": [ { "id": "A0A8M9PCE9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PCE9", "type": "external" } ], "mass": 64345.0, "length": 571, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC110437906", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_021322109", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322109", "type": "external" } ], "gene_names_uniprotkb": "LOC110437906", "gene_names_refseq": "LOC110437906", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:110437906)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021322109.2. COMPLETENESS: full length., [RefSeq]; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PCE9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PCH0-1", "uniprot_id": [ { "id": "A0A8M9PCH0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PCH0", "type": "external" } ], "mass": 62730.0, "length": 591, "protein_name": "54 kDa nucleoporin", "gene_name": "nup54", "organism": "Zebrafish", "refseq_name": "nucleoporin p54 isoform X1", "refseq_ac": [ { "id": "XP_021324433", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324433", "type": "external" } ], "gene_names_uniprotkb": "nup54; wu:fp63g06; zgc:77551", "gene_names_refseq": "nup54; wu:fp63g06; zgc:77551", "protein_names_uniprotkb": "54 kDa nucleoporin", "protein_names_refseq": "nucleoporin p54 isoform X1", "tax_id": 7955, "disease": "dystonia 37, early-onset with striatal lesions (Disease Ontology:DOID:0060956)", "pathway": " (dre:335750)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "21047546;25605329", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Component of the nuclear pore complex, a complex required for the trafficking across the nuclear membrane., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0017056 structural constituent of nuclear pore", "go_cellular_component": "GO:0031965 nuclear membrane;GO:0044613 nuclear pore central transport channel;GO:0005643 nuclear pore", "go_biological_process": "GO:0006999 nuclear pore organization;GO:0001889 liver development;GO:0007507 heart development;GO:0009953 dorsal/ventral pattern formation;GO:0048565 digestive tract development", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M9PCH0-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PCX7-1", "uniprot_id": [ { "id": "A0A8M9PCX7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PCX7", "type": "external" } ], "mass": 73837.0, "length": 657, "protein_name": "Carboxylic ester hydrolase", "gene_name": "si:dkey-30c15.17", "organism": "Zebrafish", "refseq_name": "cAMP-regulated D2 protein isoform X1", "refseq_ac": [ { "id": "XP_003200472", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003200472", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-30c15.17", "gene_names_refseq": "si:dkey-30c15.17", "protein_names_uniprotkb": "Carboxylic ester hydrolase; 3.1.1.-", "protein_names_refseq": "cAMP-regulated D2 protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561375)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003200472.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004104 cholinesterase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PCX7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PCY2-1", "uniprot_id": [ { "id": "A0A8M9PCY2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PCY2", "type": "external" } ], "mass": 97693.0, "length": 881, "protein_name": "Semaphorin-4D isoform X1", "gene_name": "sema4d", "organism": "Zebrafish", "refseq_name": "semaphorin-4D isoform X1", "refseq_ac": [ { "id": "XP_073791777", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073791777", "type": "external" } ], "gene_names_uniprotkb": "sema4d", "gene_names_refseq": "sema4d", "protein_names_uniprotkb": "Semaphorin-4D isoform X1", "protein_names_refseq": "semaphorin-4D isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100333323)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IC21;A0AC58IC24", "ec_number_list": [], "go_molecular_function": "GO:0030215 semaphorin receptor binding;GO:0038191 neuropilin binding;GO:0045499 chemorepellent activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005886 plasma membrane", "go_biological_process": "GO:0030335 positive regulation of cell migration;GO:0071526 semaphorin-plexin signaling pathway;GO:0007420 brain development;GO:0009612 response to mechanical stimulus;GO:0001755 neural crest cell migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PCY2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PD09-1", "uniprot_id": [ { "id": "A0A8M9PD09_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PD09", "type": "external" } ], "mass": 51922.0, "length": 451, "protein_name": "Hexosyltransferase", "gene_name": "b3gnt9", "organism": "Zebrafish", "refseq_name": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 isoform X1", "refseq_ac": [ { "id": "XP_005159205", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005159205", "type": "external" } ], "gene_names_uniprotkb": "b3gnt9", "gene_names_refseq": "b3gnt9", "protein_names_uniprotkb": "Hexosyltransferase; 2.4.1.-", "protein_names_refseq": "UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100034499)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008194 UDP-glycosyltransferase activity;GO:0016758 hexosyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0030311 poly-N-acetyllactosamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PD09-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PD22-1", "uniprot_id": [ { "id": "A0A8M9PD22_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PD22", "type": "external" } ], "mass": 51841.0, "length": 465, "protein_name": "Proteinase-activated receptor 1", "gene_name": "si:dkey-163m14.6", "organism": "Zebrafish", "refseq_name": "proteinase-activated receptor 1-like isoform X1", "refseq_ac": [ { "id": "XP_021324678", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324678", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-163m14.6", "gene_names_refseq": "si:dkey-163m14.6", "protein_names_uniprotkb": "Proteinase-activated receptor 1; Thrombin receptor", "protein_names_refseq": "proteinase-activated receptor 1-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:794278)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015057 thrombin-activated receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007596 blood coagulation;GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway;GO:0030194 positive regulation of blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PD22-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PD30-1", "uniprot_id": [ { "id": "A0A8M9PD30_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PD30", "type": "external" } ], "mass": 65938.0, "length": 598, "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1", "gene_name": "pip5k1ab", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1", "refseq_ac": [ { "id": "XP_021322354", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322354", "type": "external" } ], "gene_names_uniprotkb": "pip5k1ab; im:7140933; zgc:158838", "gene_names_refseq": "im:7140933; pip5k1ab; zgc:158838", "protein_names_uniprotkb": "Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1", "protein_names_refseq": "phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021322354.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity;GO:0052742 phosphatidylinositol kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0046854 phosphatidylinositol phosphate biosynthetic process;GO:0046488 phosphatidylinositol metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PD30-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PDG6-1", "uniprot_id": [ { "id": "A0A8M9PDG6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PDG6", "type": "external" } ], "mass": 38974.0, "length": 349, "protein_name": "Cathepsin K isoform X1", "gene_name": "cts12", "organism": "Zebrafish", "refseq_name": "cathepsin K isoform X1", "refseq_ac": [ { "id": "XP_695425", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_695425", "type": "external" } ], "gene_names_uniprotkb": "cts12", "gene_names_refseq": "cts12", "protein_names_uniprotkb": "Cathepsin K isoform X1", "protein_names_refseq": "cathepsin K isoform X1", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:567046)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1QCP8", "ec_number_list": [], "go_molecular_function": "GO:0004197 cysteine-type endopeptidase activity;GO:0008656 cysteine-type endopeptidase activator activity involved in apoptotic process;GO:0008234 cysteine-type peptidase activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005764 lysosome", "go_biological_process": "GO:0006955 immune response;GO:2001235 positive regulation of apoptotic signaling pathway;GO:0051603 proteolysis involved in protein catabolic process;GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PDG6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PDL2-1", "uniprot_id": [ { "id": "A0A8M9PDL2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PDL2", "type": "external" } ], "mass": 151236.0, "length": 1359, "protein_name": "Phospholipid-transporting ATPase", "gene_name": "atp8b2", "organism": "Zebrafish", "refseq_name": "phospholipid-transporting ATPase ID isoform X1", "refseq_ac": [ { "id": "XP_021322579", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322579", "type": "external" } ], "gene_names_uniprotkb": "atp8b2", "gene_names_refseq": "atp8b2", "protein_names_uniprotkb": "Phospholipid-transporting ATPase; 7.6.2.1", "protein_names_refseq": "phospholipid-transporting ATPase ID isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:323754)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0005524 ATP binding;GO:0016887 ATP hydrolysis activity;GO:0140326 ATPase-coupled intramembrane lipid transporter activity;GO:0140345 phosphatidylcholine flippase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005802 trans-Golgi network;GO:0016020 membrane", "go_biological_process": "GO:0045332 phospholipid translocation;GO:0007030 Golgi organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PDL2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PDN1-1", "uniprot_id": [ { "id": "A0A8M9PDN1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PDN1", "type": "external" } ], "mass": 64957.0, "length": 581, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr211", "organism": "Zebrafish", "refseq_name": "uncharacterized protein pimr211", "refseq_ac": [ { "id": "XP_021329202", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329202", "type": "external" } ], "gene_names_uniprotkb": "pimr211", "gene_names_refseq": "pimr211", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein pimr211", "tax_id": 7955, "disease": "", "pathway": " (dre:100034564)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PDN1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PDP8-1", "uniprot_id": [ { "id": "A0A8M9PDP8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PDP8", "type": "external" } ], "mass": 24837.0, "length": 219, "protein_name": "Glutathione S-transferase kappa", "gene_name": "si:dkey-40m6.14", "organism": "Zebrafish", "refseq_name": "glutathione S-transferase kappa 1 isoform X6", "refseq_ac": [ { "id": "XP_073780981", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073780981", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-40m6.14; gstk1; zgc:92763", "gene_names_refseq": "gstk1; zgc:92763", "protein_names_uniprotkb": "Glutathione S-transferase kappa; 2.5.1.18", "protein_names_refseq": "glutathione S-transferase kappa 1 isoform X6", "tax_id": 7955, "disease": "metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208); colon adenocarcinoma (Disease Ontology:DOID:234)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HG75;A0AC58HG81;A0AC58HG94;A0AC58HG98", "ec_number_list": [ { "id": "2.5.1.18", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.18", "type": "external" }, { "id": "1.20.4.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.20.4.2", "type": "external" }, { "id": "1.8.5.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.5.1", "type": "external" }, { "id": "5.2.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.2", "type": "external" } ], "go_molecular_function": "GO:0004364 glutathione transferase activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PDP8-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PDQ2-1", "uniprot_id": [ { "id": "A0A8M9PDQ2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PDQ2", "type": "external" } ], "mass": 245512.0, "length": 2280, "protein_name": "AT-rich interactive domain-containing protein 1A isoform X1", "gene_name": "arid1aa", "organism": "Zebrafish", "refseq_name": "AT-rich interactive domain-containing protein 1A isoform X1", "refseq_ac": [ { "id": "XP_021322624", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322624", "type": "external" } ], "gene_names_uniprotkb": "arid1aa", "gene_names_refseq": "arid1aa", "protein_names_uniprotkb": "AT-rich interactive domain-containing protein 1A isoform X1", "protein_names_refseq": "AT-rich interactive domain-containing protein 1A isoform X1", "tax_id": 7955, "disease": "ovarian clear cell carcinoma (Disease Ontology:DOID:0050934); Coffin-Siris syndrome 1 (Disease Ontology:DOID:0070042); Coffin-Siris syndrome 2 (Disease Ontology:DOID:0070044); stomach cancer (Disease Ontology:DOID:10534); pre-eclampsia (Disease Ontology:DOID:10591); alcohol use disorder (Disease Ontology:DOID:1574); breast cancer (Disease Ontology:DOID:1612); cancer (Disease Ontology:DOID:162); Coffin-Siris syndrome (Disease Ontology:DOID:1925); colon cancer (Disease Ontology:DOID:219); endometrial adenocarcinoma (Disease Ontology:DOID:2870); gastric adenocarcinoma (Disease Ontology:DOID:3717); lung non-small cell carcinoma (Disease Ontology:DOID:3908); esophagus adenocarcinoma (Disease Ontology:DOID:4914); Klatskin's tumor (Disease Ontology:DOID:4927); intrahepatic cholangiocarcinoma (Disease Ontology:DOID:4928); hepatocellular carcinoma (Disease Ontology:DOID:684); neuroblastoma (Disease Ontology:DOID:769); colorectal cancer (Disease Ontology:DOID:9256); nasopharynx carcinoma (Disease Ontology:DOID:9261)", "pathway": " (dre:100141358)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021322624.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 20, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0016514 SWI/SNF complex;GO:0071565 nBAF complex;GO:0035060 brahma complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007399 nervous system development;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PDQ2-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PDU9-1", "uniprot_id": [ { "id": "A0A8M9PDU9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PDU9", "type": "external" } ], "mass": 108871.0, "length": 978, "protein_name": "Disintegrin and metalloproteinase domain-containing protein 22 isoform X1", "gene_name": "adam22", "organism": "Zebrafish", "refseq_name": "disintegrin and metalloproteinase domain-containing protein 22 isoform X1", "refseq_ac": [ { "id": "XP_021322679", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322679", "type": "external" } ], "gene_names_uniprotkb": "adam22", "gene_names_refseq": "adam22", "protein_names_uniprotkb": "Disintegrin and metalloproteinase domain-containing protein 22 isoform X1", "protein_names_refseq": "disintegrin and metalloproteinase domain-containing protein 22 isoform X1", "tax_id": 7955, "disease": "developmental and epileptic encephalopathy 61 (Disease Ontology:DOID:0080434)", "pathway": " (dre:100126805)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008237 metallopeptidase activity", "go_cellular_component": "GO:0012505 endomembrane system;GO:0098839 postsynaptic density membrane", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PDU9-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PDW0-1", "uniprot_id": [ { "id": "A0A8M9PDW0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PDW0", "type": "external" } ], "mass": 69911.0, "length": 599, "protein_name": "Uncharacterized protein sp100.3", "gene_name": "sp100.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein sp100.3", "refseq_ac": [ { "id": "XP_683309", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_683309", "type": "external" } ], "gene_names_uniprotkb": "sp100.3", "gene_names_refseq": "sp100.3", "protein_names_uniprotkb": "Uncharacterized protein sp100.3", "protein_names_refseq": "uncharacterized protein sp100.3", "tax_id": 7955, "disease": "hepatic venoocclusive disease with immunodeficiency (Disease Ontology:DOID:0112254); tuberculosis (Disease Ontology:DOID:399)", "pathway": " (dre:555649); (R-DRE-3108214)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_683309.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7F805", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PDW0-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PDX2-1", "uniprot_id": [ { "id": "A0A8M9PDX2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PDX2", "type": "external" } ], "mass": 203977.0, "length": 1836, "protein_name": "Laminin subunit beta-1", "gene_name": "lamb2l", "organism": "Zebrafish", "refseq_name": "laminin subunit beta-1", "refseq_ac": [ { "id": "XP_005162178", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162178", "type": "external" } ], "gene_names_uniprotkb": "lamb2l", "gene_names_refseq": "lamb2l", "protein_names_uniprotkb": "Laminin subunit beta-1", "protein_names_refseq": "laminin subunit beta-1", "tax_id": 7955, "disease": "", "pathway": " (dre:553337)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1QD37", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0043256 laminin complex", "go_biological_process": "GO:0016477 cell migration;GO:0009887 animal organ morphogenesis;GO:0034446 substrate adhesion-dependent cell spreading;GO:0007411 axon guidance;GO:0009888 tissue development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PDX2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PE56-1", "uniprot_id": [ { "id": "A0A8M9PE56_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PE56", "type": "external" } ], "mass": 41224.0, "length": 366, "protein_name": "Delta-type opioid receptor isoform X1", "gene_name": "npbwr2a", "organism": "Zebrafish", "refseq_name": "delta-type opioid receptor isoform X1", "refseq_ac": [ { "id": "XP_684448", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_684448", "type": "external" } ], "gene_names_uniprotkb": "npbwr2a; LOC556532", "gene_names_refseq": "LOC556532", "protein_names_uniprotkb": "Delta-type opioid receptor isoform X1", "protein_names_refseq": "delta-type opioid receptor isoform X1", "tax_id": 7955, "disease": "", "pathway": " (R-DRE-375276); (R-DRE-418594)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_684448.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "X1WE14", "ec_number_list": [], "go_molecular_function": "GO:0001626 nociceptin receptor activity;GO:0042923 neuropeptide binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0043005 neuron projection", "go_biological_process": "GO:0007218 neuropeptide signaling pathway;GO:0019233 sensory perception of pain", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PE56-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PE63-1", "uniprot_id": [ { "id": "A0A8M9PE63_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PE63", "type": "external" } ], "mass": 37314.0, "length": 344, "protein_name": "Ketohexokinase isoform X1", "gene_name": "khk", "organism": "Zebrafish", "refseq_name": "ketohexokinase isoform X1", "refseq_ac": [ { "id": "XP_021322819", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322819", "type": "external" } ], "gene_names_uniprotkb": "khk; wu:fj68h03; zgc:92219; zgc:92626", "gene_names_refseq": "khk; wu:fj68h03; zgc:92219; zgc:92626", "protein_names_uniprotkb": "Ketohexokinase isoform X1", "protein_names_refseq": "ketohexokinase isoform X1", "tax_id": 7955, "disease": "essential fructosuria (Disease Ontology:DOID:0111680)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Catalyzes the phosphorylation of the ketose sugar fructose to fructose-1-phosphate., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004454 ketohexokinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "GO:0006000 fructose metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PE63-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PE67-1", "uniprot_id": [ { "id": "A0A8M9PE67_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PE67", "type": "external" } ], "mass": 48777.0, "length": 428, "protein_name": "Neuromedin-U receptor 1", "gene_name": "nmur1a", "organism": "Zebrafish", "refseq_name": "neuromedin-U receptor 1", "refseq_ac": [ { "id": "XP_021325138", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325138", "type": "external" } ], "gene_names_uniprotkb": "nmur1a", "gene_names_refseq": "nmur1a", "protein_names_uniprotkb": "Neuromedin-U receptor 1", "protein_names_refseq": "neuromedin-U receptor 1", "tax_id": 7955, "disease": "obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:557276)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Receptor for the neuromedin-U and neuromedin-S neuropeptides., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IHP6;A0AC58IHS1", "ec_number_list": [], "go_molecular_function": "GO:0008188 neuropeptide receptor activity;GO:0001607 neuromedin U receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007218 neuropeptide signaling pathway;GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PE67-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PE75-1", "uniprot_id": [ { "id": "A0A8M9PE75_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PE75", "type": "external" } ], "mass": 41509.0, "length": 369, "protein_name": "C-C chemokine receptor type 9", "gene_name": "ccr9b", "organism": "Zebrafish", "refseq_name": "C-C chemokine receptor type 9", "refseq_ac": [ { "id": "XP_009295593", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295593", "type": "external" } ], "gene_names_uniprotkb": "ccr9b", "gene_names_refseq": "ccr9b", "protein_names_uniprotkb": "C-C chemokine receptor type 9", "protein_names_refseq": "C-C chemokine receptor type 9", "tax_id": 7955, "disease": "asthma (Disease Ontology:DOID:2841)", "pathway": " (dre:100006078)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_009295593.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M3AVY4", "ec_number_list": [], "go_molecular_function": "GO:0016493 C-C chemokine receptor activity;GO:0019957 C-C chemokine binding", "go_cellular_component": "GO:0005769 early endosome;GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0019722 calcium-mediated signaling;GO:0060326 cell chemotaxis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PE75-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PE99-1", "uniprot_id": [ { "id": "A0A8M9PE99_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PE99", "type": "external" } ], "mass": 69172.0, "length": 612, "protein_name": "Dystrobrevin", "gene_name": "dtnbb", "organism": "Zebrafish", "refseq_name": "dystrobrevin, beta b isoform X1", "refseq_ac": [ { "id": "XP_021322859", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322859", "type": "external" } ], "gene_names_uniprotkb": "dtnbb; bdtn; btnb; dtnb", "gene_names_refseq": "bdtn; btnb; dtnbb; dtnb", "protein_names_uniprotkb": "Dystrobrevin", "protein_names_refseq": "dystrobrevin, beta b isoform X1", "tax_id": 7955, "disease": "Duchenne muscular dystrophy (Disease Ontology:DOID:11723)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "GO:0099536 synaptic signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PE99-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PEB6-1", "uniprot_id": [ { "id": "A0A8M9PEB6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PEB6", "type": "external" } ], "mass": 33914.0, "length": 322, "protein_name": "L-serine ammonia-lyase", "gene_name": "sdsl", "organism": "Zebrafish", "refseq_name": "serine dehydratase-like", "refseq_ac": [ { "id": "NP_001314865", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001314865", "type": "external" } ], "gene_names_uniprotkb": "sdsl; si:ch73-9j13.2", "gene_names_refseq": "sdsl; si:ch73-9j13.2", "protein_names_uniprotkb": "L-serine ammonia-lyase; 4.3.1.17; L-serine deaminase; L-threonine dehydratase", "protein_names_refseq": "serine dehydratase-like", "tax_id": 7955, "disease": "Down syndrome (Disease Ontology:DOID:14250)", "pathway": " (dre:563642); (R-DRE-8849175); (R-DRE-977347)", "pathway_count": 3, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EE715158.1, SRR32588728.8352336.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On May 28, 2016 this sequence version replaced XP_692090.3. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "X1WC99", "ec_number_list": [ { "id": "4.3.1.17", "url": "https://www.rhea-db.org/rhea/?query=ec:4.3.1.17", "type": "external" } ], "go_molecular_function": "GO:0003941 L-serine ammonia-lyase activity;GO:0004794 threonine deaminase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006094 gluconeogenesis;GO:0006567 L-threonine catabolic process;GO:0006565 L-serine catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M9PEB6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PED3-1", "uniprot_id": [ { "id": "A0A8M9PED3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PED3", "type": "external" } ], "mass": 49004.0, "length": 441, "protein_name": "Forkhead box protein N3", "gene_name": "foxn3", "organism": "Zebrafish", "refseq_name": "forkhead box protein N3", "refseq_ac": [ { "id": "NP_001038728", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001038728", "type": "external" } ], "gene_names_uniprotkb": "foxn3; zgc:136571", "gene_names_refseq": "foxn3; zgc:136571", "protein_names_uniprotkb": "Forkhead box protein N3", "protein_names_refseq": "forkhead box protein N3", "tax_id": 7955, "disease": "", "pathway": " (dre:692291)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "25386660;25420467;26469318;27189481;27292639;29996093;38270285", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01020504.1, SRR32588724.934409.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505379 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Feb 10, 2016 this sequence version replaced NP_001038728.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Acts as a transcriptional repressor. May be involved in DNA damage-inducible cell cycle arrests (checkpoints)., [UniProtKB, UniProtKB]; Liver FOXN3 and glucagon control fasting glucose., [RefSeq, PubMed]; The rs8004664 risk allele drives excessive expression of FOXN3 during fasting and that FOXN3 regulates fasting blood glucose., [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HNP1;K7DY44", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000987 cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A0A8M9PED3-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PEG9-1", "uniprot_id": [ { "id": "A0A8M9PEG9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PEG9", "type": "external" } ], "mass": 88822.0, "length": 775, "protein_name": "carnitine O-palmitoyltransferase", "gene_name": "cpt1ab", "organism": "Zebrafish", "refseq_name": "carnitine O-palmitoyltransferase 1, liver isoform isoform X1", "refseq_ac": [ { "id": "XP_021329547", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329547", "type": "external" } ], "gene_names_uniprotkb": "cpt1ab", "gene_names_refseq": "cpt1ab", "protein_names_uniprotkb": "carnitine O-palmitoyltransferase; 2.3.1.21", "protein_names_refseq": "carnitine O-palmitoyltransferase 1, liver isoform isoform X1", "tax_id": 7955, "disease": "carnitine palmitoyltransferase I deficiency (Disease Ontology:DOID:0090129); lipid metabolism disorder (Disease Ontology:DOID:3146); lymphangioleiomyomatosis (Disease Ontology:DOID:3319)", "pathway": " (dre:560000)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021329547.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.3.1.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.1.21", "type": "external" } ], "go_molecular_function": "GO:0004095 carnitine O-palmitoyltransferase activity", "go_cellular_component": "GO:0005741 mitochondrial outer membrane", "go_biological_process": "GO:0006635 fatty acid beta-oxidation;GO:0031998 regulation of fatty acid beta-oxidation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PEG9-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PEH3-1", "uniprot_id": [ { "id": "A0A8M9PEH3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PEH3", "type": "external" } ], "mass": 519014.0, "length": 4654, "protein_name": "Low-density lipoprotein receptor-related protein 1B isoform X1", "gene_name": "lrp1ba", "organism": "Zebrafish", "refseq_name": "low-density lipoprotein receptor-related protein 1B isoform X1", "refseq_ac": [ { "id": "XP_021325253", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325253", "type": "external" } ], "gene_names_uniprotkb": "lrp1ba", "gene_names_refseq": "lrp1ba", "protein_names_uniprotkb": "Low-density lipoprotein receptor-related protein 1B isoform X1", "protein_names_refseq": "low-density lipoprotein receptor-related protein 1B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:565136)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0005041 low-density lipoprotein particle receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005905 clathrin-coated pit;GO:0043235 receptor complex;GO:0043226 organelle", "go_biological_process": "GO:0006898 receptor-mediated endocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PEH3-1", "record_type": "protein", "filter_code": "0000000.0000001.000100.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PEJ8-1", "uniprot_id": [ { "id": "A0A8M9PEJ8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PEJ8", "type": "external" } ], "mass": 58164.0, "length": 516, "protein_name": "Neuronal acetylcholine receptor subunit alpha-7", "gene_name": "chrna8", "organism": "Zebrafish", "refseq_name": "neuronal acetylcholine receptor subunit alpha-7", "refseq_ac": [ { "id": "XP_021329572", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329572", "type": "external" } ], "gene_names_uniprotkb": "chrna8", "gene_names_refseq": "chrna8", "protein_names_uniprotkb": "Neuronal acetylcholine receptor subunit alpha-7; Nicotinic acetylcholine receptor subunit alpha-7", "protein_names_refseq": "neuronal acetylcholine receptor subunit alpha-7", "tax_id": 7955, "disease": "nicotine dependence (Disease Ontology:DOID:0050742)", "pathway": " (dre:100537531)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "1.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity;GO:0022848 acetylcholine-gated monoatomic cation-selective channel activity;GO:1904315 transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential;GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005892 acetylcholine-gated channel complex;GO:0045202 synapse;GO:0045211 postsynaptic membrane;GO:0043005 neuron projection", "go_biological_process": "GO:0042391 regulation of membrane potential;GO:0007268 chemical synaptic transmission;GO:0034220 monoatomic ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PEJ8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PEP5-1", "uniprot_id": [ { "id": "A0A8M9PEP5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PEP5", "type": "external" } ], "mass": 61864.0, "length": 542, "protein_name": "TNF receptor-associated factor", "gene_name": "traf5", "organism": "Zebrafish", "refseq_name": "TNF receptor-associated factor 5 isoform X1", "refseq_ac": [ { "id": "XP_021325328", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325328", "type": "external" } ], "gene_names_uniprotkb": "traf5", "gene_names_refseq": "traf5", "protein_names_uniprotkb": "TNF receptor-associated factor; 2.3.2.27", "protein_names_refseq": "TNF receptor-associated factor 5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:563887)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0035591 signaling adaptor activity;GO:0005164 tumor necrosis factor receptor binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0009898 cytoplasmic side of plasma membrane", "go_biological_process": "GO:0007166 cell surface receptor signaling pathway;GO:0006915 apoptotic process;GO:0042981 regulation of apoptotic process;GO:0043122 regulation of canonical NF-kappaB signal transduction;GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PEP5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PES1-1", "uniprot_id": [ { "id": "A0A8M9PES1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PES1", "type": "external" } ], "mass": 77112.0, "length": 685, "protein_name": "Ankyrin repeat domain-containing protein 6 isoform X1", "gene_name": "ankrd6a", "organism": "Zebrafish", "refseq_name": "ankyrin repeat domain-containing protein 6 isoform X1", "refseq_ac": [ { "id": "XP_021323059", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323059", "type": "external" } ], "gene_names_uniprotkb": "ankrd6a", "gene_names_refseq": "ankrd6a", "protein_names_uniprotkb": "Ankyrin repeat domain-containing protein 6 isoform X1", "protein_names_refseq": "ankyrin repeat domain-containing protein 6 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100330565)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0030111 regulation of Wnt signaling pathway;GO:0007163 establishment or maintenance of cell polarity", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PES1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PEX1-1", "uniprot_id": [ { "id": "A0A8M9PEX1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PEX1", "type": "external" } ], "mass": 80205.0, "length": 729, "protein_name": "Leucine-rich repeat-containing protein 4B", "gene_name": "lrrc4ba", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat-containing protein 4B", "refseq_ac": [ { "id": "XP_021329717", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329717", "type": "external" } ], "gene_names_uniprotkb": "lrrc4ba", "gene_names_refseq": "lrrc4ba", "protein_names_uniprotkb": "Leucine-rich repeat-containing protein 4B", "protein_names_refseq": "leucine-rich repeat-containing protein 4B", "tax_id": 7955, "disease": "", "pathway": " (dre:556747); (R-DRE-388844)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F1QBH8", "ec_number_list": [], "go_molecular_function": "GO:0098632 cell-cell adhesion mediator activity", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0005886 plasma membrane;GO:0098839 postsynaptic density membrane", "go_biological_process": "GO:0051965 positive regulation of synapse assembly;GO:0099560 synaptic membrane adhesion;GO:1905606 regulation of presynapse assembly;GO:0099151 regulation of postsynaptic density assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PEX1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PEY3-1", "uniprot_id": [ { "id": "A0A8M9PEY3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PEY3", "type": "external" } ], "mass": 50227.0, "length": 449, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC562898", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-1-like", "refseq_ac": [ { "id": "XP_021329732", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329732", "type": "external" } ], "gene_names_uniprotkb": "LOC562898", "gene_names_refseq": "LOC562898", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-1-like", "tax_id": 7955, "disease": "", "pathway": " (dre:562898)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021329732.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PEY3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PF12-1", "uniprot_id": [ { "id": "A0A8M9PF12_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PF12", "type": "external" } ], "mass": 26253.0, "length": 243, "protein_name": "Claudin", "gene_name": "LOC101886267", "organism": "Zebrafish", "refseq_name": "claudin-20", "refseq_ac": [ { "id": "XP_005169938", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169938", "type": "external" } ], "gene_names_uniprotkb": "LOC101886267", "gene_names_refseq": "LOC101886267", "protein_names_uniprotkb": "Claudin", "protein_names_refseq": "claudin-20", "tax_id": 7955, "disease": "", "pathway": " (dre:101886267)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Claudins function as major constituents of the tight junction complexes that regulate the permeability of epithelia., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005198 structural molecule activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005923 bicellular tight junction", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PF12-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PF26-1", "uniprot_id": [ { "id": "A0A8M9PF26_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PF26", "type": "external" } ], "mass": 22454.0, "length": 204, "protein_name": "Cell division cycle 42 like 2 isoform X1", "gene_name": "cdc42l2", "organism": "Zebrafish", "refseq_name": "cell division cycle 42 like 2 isoform X1", "refseq_ac": [ { "id": "XP_021325488", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325488", "type": "external" } ], "gene_names_uniprotkb": "cdc42l2; zgc:136923", "gene_names_refseq": "cdc42l2; zgc:136923", "protein_names_uniprotkb": "Cell division cycle 42 like 2 isoform X1", "protein_names_refseq": "cell division cycle 42 like 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556226)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "15894457;19409617;20405038;27189481;28252024;33271598;36229514", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0051286 cell tip;GO:0005886 plasma membrane;GO:0005938 cell cortex;GO:0016020 membrane", "go_biological_process": "GO:0051301 cell division;GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A0A8M9PF26-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PF27-1", "uniprot_id": [ { "id": "A0A8M9PF27_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PF27", "type": "external" } ], "mass": 45510.0, "length": 400, "protein_name": "V-type proton ATPase subunit C", "gene_name": "atp6v1c2", "organism": "Zebrafish", "refseq_name": "V-type proton ATPase subunit C 1-B", "refseq_ac": [ { "id": "XP_021323179", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323179", "type": "external" } ], "gene_names_uniprotkb": "atp6v1c2", "gene_names_refseq": "atp6v1c2", "protein_names_uniprotkb": "V-type proton ATPase subunit C", "protein_names_refseq": "V-type proton ATPase subunit C 1-B", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162)", "pathway": " (dre:100538220)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046961 proton-transporting ATPase activity, rotational mechanism", "go_cellular_component": "GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PF27-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PFG1-1", "uniprot_id": [ { "id": "A0A8M9PFG1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PFG1", "type": "external" } ], "mass": 74771.0, "length": 670, "protein_name": "SH3 domain-binding protein 1", "gene_name": "sh3bp1", "organism": "Zebrafish", "refseq_name": "SH3 domain-binding protein 1", "refseq_ac": [ { "id": "XP_021329927", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329927", "type": "external" } ], "gene_names_uniprotkb": "sh3bp1", "gene_names_refseq": "sh3bp1", "protein_names_uniprotkb": "SH3 domain-binding protein 1", "protein_names_refseq": "SH3 domain-binding protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100006678)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021329927.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PFG1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PFN1-1", "uniprot_id": [ { "id": "A0A8M9PFN1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PFN1", "type": "external" } ], "mass": 114694.0, "length": 1037, "protein_name": "Solute carrier family 12 member 1", "gene_name": "slc12a1", "organism": "Zebrafish", "refseq_name": "solute carrier family 12 member 1", "refseq_ac": [ { "id": "XP_021323409", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323409", "type": "external" } ], "gene_names_uniprotkb": "slc12a1", "gene_names_refseq": "slc12a1", "protein_names_uniprotkb": "Solute carrier family 12 member 1", "protein_names_refseq": "solute carrier family 12 member 1", "tax_id": 7955, "disease": "Bartter disease type 1 (Disease Ontology:DOID:0110142); epilepsy (Disease Ontology:DOID:1826); Bartter disease (Disease Ontology:DOID:445)", "pathway": " (dre:100329975)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008511 sodium:potassium:chloride symporter activity", "go_cellular_component": "GO:0016324 apical plasma membrane", "go_biological_process": "GO:0006884 cell volume homeostasis;GO:1902476 chloride transmembrane transport;GO:0035725 sodium ion transmembrane transport;GO:0055075 potassium ion homeostasis;GO:0055078 sodium ion homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PFN1-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PFU6-1", "uniprot_id": [ { "id": "A0A8M9PFU6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PFU6", "type": "external" } ], "mass": 209546.0, "length": 1880, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "alpk3a", "organism": "Zebrafish", "refseq_name": "alpha-protein kinase 3 isoform X1", "refseq_ac": [ { "id": "XP_021323493", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323493", "type": "external" } ], "gene_names_uniprotkb": "alpk3a", "gene_names_refseq": "alpk3a", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "alpha-protein kinase 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100321139)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PFU6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PFW3-1", "uniprot_id": [ { "id": "A0A8M9PFW3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PFW3", "type": "external" } ], "mass": 20396.0, "length": 179, "protein_name": "Ferritin", "gene_name": "wu:fa11g10", "organism": "Zebrafish", "refseq_name": "ferritin, lower subunit-like isoform X1", "refseq_ac": [ { "id": "XP_021325798", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325798", "type": "external" } ], "gene_names_uniprotkb": "wu:fa11g10; fa11g10; fb23g05; wu:fb23g05; zgc:56095; zgc:86792", "gene_names_refseq": "fa11g10; fb23g05; wu:fa11g10; wu:fb23g05; zgc:56095; zgc:86792", "protein_names_uniprotkb": "Ferritin", "protein_names_refseq": "ferritin, lower subunit-like isoform X1", "tax_id": 7955, "disease": "candidiasis (Disease Ontology:DOID:1508)", "pathway": " (dre:406286)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.16.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.16.3.1", "type": "external" } ], "go_molecular_function": "GO:0004322 ferroxidase activity;GO:0008199 ferric iron binding", "go_cellular_component": "", "go_biological_process": "GO:0006879 intracellular iron ion homeostasis;GO:0006826 iron ion transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PFW3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PFY2-1", "uniprot_id": [ { "id": "A0A8M9PFY2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PFY2", "type": "external" } ], "mass": 103853.0, "length": 943, "protein_name": "Epidermal growth factor receptor substrate 15-like 1 isoform X1", "gene_name": "eps15l1a", "organism": "Zebrafish", "refseq_name": "epidermal growth factor receptor substrate 15-like 1 isoform X1", "refseq_ac": [ { "id": "XP_021330132", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330132", "type": "external" } ], "gene_names_uniprotkb": "eps15l1a", "gene_names_refseq": "eps15l1a", "protein_names_uniprotkb": "Epidermal growth factor receptor substrate 15-like 1 isoform X1", "protein_names_refseq": "epidermal growth factor receptor substrate 15-like 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:568170)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0030132 clathrin coat of coated pit;GO:0005905 clathrin-coated pit", "go_biological_process": "GO:0006897 endocytosis;GO:0016197 endosomal transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PFY2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PFZ3-1", "uniprot_id": [ { "id": "A0A8M9PFZ3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PFZ3", "type": "external" } ], "mass": 41306.0, "length": 365, "protein_name": "Protein FAM118B", "gene_name": "fam118b", "organism": "Zebrafish", "refseq_name": "protein FAM118B isoform X1", "refseq_ac": [ { "id": "XP_001339495", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001339495", "type": "external" } ], "gene_names_uniprotkb": "fam118b", "gene_names_refseq": "fam118b", "protein_names_uniprotkb": "Protein FAM118B", "protein_names_refseq": "protein FAM118B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:799102)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Mar 23, 2011 this sequence version replaced XP_001339495.2. COMPLETENESS: full length., [RefSeq]; May play a role in Cajal bodies formation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7FEK3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016604 nuclear body", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PFZ3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PG44-1", "uniprot_id": [ { "id": "A0A8M9PG44_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PG44", "type": "external" } ], "mass": 60956.0, "length": 547, "protein_name": "5'-AMP-activated protein kinase subunit gamma-2a isoform X1", "gene_name": "prkag2a", "organism": "Zebrafish", "refseq_name": "5'-AMP-activated protein kinase subunit gamma-2a isoform X1", "refseq_ac": [ { "id": "XP_021325888", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325888", "type": "external" } ], "gene_names_uniprotkb": "prkag2a; zgc:153329", "gene_names_refseq": "prkag2a; zgc:153329", "protein_names_uniprotkb": "5'-AMP-activated protein kinase subunit gamma-2a isoform X1", "protein_names_refseq": "5'-AMP-activated protein kinase subunit gamma-2a isoform X1", "tax_id": 7955, "disease": "lethal congenital glycogen storage disease of heart (Disease Ontology:DOID:0090101); hypertrophic cardiomyopathy 6 (Disease Ontology:DOID:0110312); neurodegenerative disease (Disease Ontology:DOID:1289); glycogen storage disease (Disease Ontology:DOID:2747); Wolff-Parkinson-White syndrome (Disease Ontology:DOID:384)", "pathway": " (dre:570761)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;29351486", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0019901 protein kinase binding;GO:0016208 AMP binding;GO:0019887 protein kinase regulator activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0031588 nucleotide-activated protein kinase complex", "go_biological_process": "GO:0006110 regulation of glycolytic process;GO:0006633 fatty acid biosynthetic process;GO:0042149 cellular response to glucose starvation;GO:0045722 positive regulation of gluconeogenesis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M9PG44-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PGA1-1", "uniprot_id": [ { "id": "A0A8M9PGA1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PGA1", "type": "external" } ], "mass": 29831.0, "length": 259, "protein_name": "ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase", "gene_name": "cd38", "organism": "Zebrafish", "refseq_name": "ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 isoform X1", "refseq_ac": [ { "id": "XP_021325948", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325948", "type": "external" } ], "gene_names_uniprotkb": "cd38; LOC101886891", "gene_names_refseq": "LOC101886891", "protein_names_uniprotkb": "ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase; 3.2.2.6", "protein_names_refseq": "ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886891)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58ITN5;A0AC58ITP1;A0AC58ITP2", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0016740 transferase activity;GO:0016849 phosphorus-oxygen lyase activity;GO:0061809 NAD+ nucleosidase activity, cyclic ADP-ribose generating", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0030890 positive regulation of B cell proliferation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PGA1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PGB2-1", "uniprot_id": [ { "id": "A0A8M9PGB2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PGB2", "type": "external" } ], "mass": 77856.0, "length": 719, "protein_name": "POU domain protein", "gene_name": "pou6f2", "organism": "Zebrafish", "refseq_name": "POU domain, class 6, transcription factor 2 isoform X1", "refseq_ac": [ { "id": "XP_021325963", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325963", "type": "external" } ], "gene_names_uniprotkb": "pou6f2", "gene_names_refseq": "pou6f2", "protein_names_uniprotkb": "POU domain protein", "protein_names_refseq": "POU domain, class 6, transcription factor 2 isoform X1", "tax_id": 7955, "disease": "nephroblastoma (Disease Ontology:DOID:2154)", "pathway": " (dre:100001518)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58ITX9;A0AC58ITY3", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0043565 sequence-specific DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0031099 regeneration;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PGB2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PGC0-1", "uniprot_id": [ { "id": "A0A8M9PGC0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PGC0", "type": "external" } ], "mass": 62233.0, "length": 548, "protein_name": "Neuropilin and tolloid-like protein 1 isoform X1", "gene_name": "neto1l", "organism": "Zebrafish", "refseq_name": "neuropilin and tolloid-like protein 1 isoform X1", "refseq_ac": [ { "id": "XP_021325973", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325973", "type": "external" } ], "gene_names_uniprotkb": "neto1l", "gene_names_refseq": "neto1l", "protein_names_uniprotkb": "Neuropilin and tolloid-like protein 1 isoform X1", "protein_names_refseq": "neuropilin and tolloid-like protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100331363)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035255 ionotropic glutamate receptor binding", "go_cellular_component": "GO:0098839 postsynaptic density membrane", "go_biological_process": "GO:0098696 regulation of neurotransmitter receptor localization to postsynaptic specialization membrane;GO:0099645 neurotransmitter receptor localization to postsynaptic specialization membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PGC0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PGX9-1", "uniprot_id": [ { "id": "A0A8M9PGX9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PGX9", "type": "external" } ], "mass": 59725.0, "length": 545, "protein_name": "Transmembrane protein 266 isoform X1", "gene_name": "tmem266", "organism": "Zebrafish", "refseq_name": "transmembrane protein 266 isoform X1", "refseq_ac": [ { "id": "XP_021326210", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326210", "type": "external" } ], "gene_names_uniprotkb": "tmem266; zgc:158624", "gene_names_refseq": "tmem266; zgc:158624", "protein_names_uniprotkb": "Transmembrane protein 266 isoform X1", "protein_names_refseq": "transmembrane protein 266 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:791190)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IW35;A0AC58IW40;A0AC58IW41;A0AC58IW42;A0AC58IW43;A0AC58IW45;A0AC58IW46;A0AC58IW47", "ec_number_list": [], "go_molecular_function": "GO:0022832 voltage-gated channel activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PGX9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PH28-1", "uniprot_id": [ { "id": "A0A8M9PH28_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PH28", "type": "external" } ], "mass": 47660.0, "length": 418, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC108180115", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-2-like", "refseq_ac": [ { "id": "NP_001430391", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001430391", "type": "external" } ], "gene_names_uniprotkb": "LOC108180115", "gene_names_refseq": "LOC108180115", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:108180115)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588728.26285910.1, SRR32588722.35191070.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN18715719, SAMN18715720 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PH28-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PH33-1", "uniprot_id": [ { "id": "A0A8M9PH33_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PH33", "type": "external" } ], "mass": 71275.0, "length": 653, "protein_name": "Synaptotagmin-7", "gene_name": "syt7a", "organism": "Zebrafish", "refseq_name": "uncharacterized protein syt7a", "refseq_ac": [ { "id": "XP_021326273", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326273", "type": "external" } ], "gene_names_uniprotkb": "syt7a", "gene_names_refseq": "syt7a", "protein_names_uniprotkb": "Synaptotagmin-7; Synaptotagmin VII", "protein_names_refseq": "uncharacterized protein syt7a", "tax_id": 7955, "disease": "type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:561429)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021326273.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0046872 metal ion binding;GO:0005544 calcium-dependent phospholipid binding;GO:0000149 SNARE binding;GO:0061891 calcium ion sensor activity", "go_cellular_component": "GO:0005778 peroxisomal membrane;GO:0005886 plasma membrane;GO:0030424 axon;GO:0045202 synapse;GO:0005765 lysosomal membrane", "go_biological_process": "GO:0001778 plasma membrane repair;GO:0030100 regulation of endocytosis;GO:0050796 regulation of insulin secretion;GO:0016192 vesicle-mediated transport;GO:0017158 regulation of calcium ion-dependent exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PH33-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PH82-1", "uniprot_id": [ { "id": "A0A8M9PH82_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PH82", "type": "external" } ], "mass": 53480.0, "length": 470, "protein_name": "Protein APCDD1", "gene_name": "LOC100332639", "organism": "Zebrafish", "refseq_name": "protein APCDD1-like precursor", "refseq_ac": [ { "id": "NP_001429821", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429821", "type": "external" } ], "gene_names_uniprotkb": "LOC100332639", "gene_names_refseq": "LOC100332639", "protein_names_uniprotkb": "Protein APCDD1", "protein_names_refseq": "protein APCDD1-like precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100332639)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588733.190990.1, SRR32588729.26407015.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN08196789 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Aug 29, 2025 this sequence version replaced XP_021324064.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0017147 Wnt-protein binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0016055 Wnt signaling pathway;GO:0030178 negative regulation of Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PH82-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PHA4-1", "uniprot_id": [ { "id": "A0A8M9PHA4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PHA4", "type": "external" } ], "mass": 68165.0, "length": 597, "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene_name": "galnt8a.1", "organism": "Zebrafish", "refseq_name": "probable polypeptide N-acetylgalactosaminyltransferase 8", "refseq_ac": [ { "id": "XP_021326338", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326338", "type": "external" } ], "gene_names_uniprotkb": "galnt8a.1", "gene_names_refseq": "galnt8a.1", "protein_names_uniprotkb": "Polypeptide N-acetylgalactosaminyltransferase; 2.4.1.-; Protein-UDP acetylgalactosaminyltransferase", "protein_names_refseq": "probable polypeptide N-acetylgalactosaminyltransferase 8", "tax_id": 7955, "disease": "", "pathway": " (dre:568547)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0030246 carbohydrate binding;GO:0004653 polypeptide N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0006493 protein O-linked glycosylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PHA4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PHK4-1", "uniprot_id": [ { "id": "A0A8M9PHK4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PHK4", "type": "external" } ], "mass": 74013.0, "length": 661, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC110438410", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_021326458", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326458", "type": "external" } ], "gene_names_uniprotkb": "LOC110438410", "gene_names_refseq": "LOC110438410", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:110438410)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021326458.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PHK4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PHX8-1", "uniprot_id": [ { "id": "A0A8M9PHX8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PHX8", "type": "external" } ], "mass": 63178.0, "length": 572, "protein_name": "E3 ubiquitin-protein ligase NEURL1", "gene_name": "neurl1aa", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase NEURL1 isoform X1", "refseq_ac": [ { "id": "XP_021330967", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330967", "type": "external" } ], "gene_names_uniprotkb": "neurl1aa; neurl1a; neurla; neurl; si:dkey-82d4.1; si:dkey-82d4.3; zgc:153971", "gene_names_refseq": "neurl1aa; neurl1a; neurla; neurl; si:dkey-82d4.1; si:dkey-82d4.3; zgc:153971", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase NEURL1; 2.3.2.27; Neuralized-like protein 1A; RING-type E3 ubiquitin transferase NEURL1", "protein_names_refseq": "E3 ubiquitin-protein ligase NEURL1 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Plays a role in hippocampal-dependent synaptic plasticity, learning and memory. Involved in the formation of spines and functional synaptic contacts by modulating the translational activity of the cytoplasmic polyadenylation element-binding protein CPEB3. Promotes ubiquitination of CPEB3, and hence induces CPEB3-dependent mRNA translation activation of glutamate receptor GRIA1 and GRIA2. Can function as an E3 ubiquitin-protein ligase to activate monoubiquitination of JAG1 (in vitro), thereby regulating the Notch pathway. Acts as a tumor suppressor; inhibits malignant cell transformation of medulloblastoma (MB) cells by inhibiting the Notch signaling pathway., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0014069 postsynaptic density;GO:0030425 dendrite;GO:0043204 perikaryon;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "GO:0006417 regulation of translation;GO:0007219 Notch signaling pathway;GO:0048170 positive regulation of long-term neuronal synaptic plasticity;GO:0008593 regulation of Notch signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PHX8-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PHY3-1", "uniprot_id": [ { "id": "A0A8M9PHY3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PHY3", "type": "external" } ], "mass": 75137.0, "length": 688, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr113", "organism": "Zebrafish", "refseq_name": "uncharacterized protein pimr113", "refseq_ac": [ { "id": "XP_021324349", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324349", "type": "external" } ], "gene_names_uniprotkb": "pimr113", "gene_names_refseq": "pimr113", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein pimr113", "tax_id": 7955, "disease": "", "pathway": " (dre:558678)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021324349.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PHY3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PFQ7-1", "uniprot_id": [ { "id": "A0A8M9PFQ7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PFQ7", "type": "external" } ], "mass": 133459.0, "length": 1254, "protein_name": "Uncharacterized protein sall2 isoform X1", "gene_name": "sall2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein sall2 isoform X1", "refseq_ac": [ { "id": "XP_021323444", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323444", "type": "external" } ], "gene_names_uniprotkb": "sall2", "gene_names_refseq": "sall2", "protein_names_uniprotkb": "Uncharacterized protein sall2 isoform X1", "protein_names_refseq": "uncharacterized protein sall2 isoform X1", "tax_id": 7955, "disease": "coloboma (Disease Ontology:DOID:12270)", "pathway": " (dre:568044)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PFQ7-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9P750-1", "uniprot_id": [ { "id": "A0A8M9P750_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9P750", "type": "external" } ], "mass": 66101.0, "length": 590, "protein_name": "Transcription factor RelB isoform X1", "gene_name": "relb", "organism": "Zebrafish", "refseq_name": "transcription factor RelB isoform X1", "refseq_ac": [ { "id": "XP_021322023", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322023", "type": "external" } ], "gene_names_uniprotkb": "relb", "gene_names_refseq": "relb", "protein_names_uniprotkb": "Transcription factor RelB isoform X1", "protein_names_refseq": "transcription factor RelB isoform X1", "tax_id": 7955, "disease": "immunodeficiency 53 (Disease Ontology:DOID:0111992); bacterial infectious disease (Disease Ontology:DOID:104); prediabetes syndrome (Disease Ontology:DOID:11716); breast cancer (Disease Ontology:DOID:1612); transitional cell carcinoma (Disease Ontology:DOID:2671); atopic dermatitis (Disease Ontology:DOID:3310); ureteral obstruction (Disease Ontology:DOID:5199); kidney disease (Disease Ontology:DOID:557); muscular atrophy (Disease Ontology:DOID:767)", "pathway": " (dre:795414)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 9, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0060429 epithelium development;GO:0006351 DNA-templated transcription;GO:0007399 nervous system development;GO:0048511 rhythmic process;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9P750-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PG68-1", "uniprot_id": [ { "id": "A0A8M9PG68_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PG68", "type": "external" } ], "mass": 50663.0, "length": 448, "protein_name": "Lipase member H", "gene_name": "lipib", "organism": "Zebrafish", "refseq_name": "lipase member H", "refseq_ac": [ { "id": "XP_021330232", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330232", "type": "external" } ], "gene_names_uniprotkb": "lipib", "gene_names_refseq": "lipib", "protein_names_uniprotkb": "Lipase member H", "protein_names_refseq": "lipase member H", "tax_id": 7955, "disease": "hypotrichosis 7 (Disease Ontology:DOID:0110704)", "pathway": " (dre:100003046)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021330232.1. COMPLETENESS: full length., [RefSeq]; Hydrolyzes specifically phosphatidic acid (PA) to produce 2-acyl lysophosphatidic acid (LPA; a potent bioactive lipid mediator) and fatty acid. Does not hydrolyze other phospholipids, like phosphatidylserine (PS), phosphatidylcholine (PC) and phosphatidylethanolamine (PE) or triacylglycerol (TG)., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.-", "type": "external" } ], "go_molecular_function": "GO:0008201 heparin binding;GO:0046872 metal ion binding;GO:0052689 carboxylic ester hydrolase activity;GO:0004620 phospholipase activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0005886 plasma membrane", "go_biological_process": "GO:0006654 phosphatidic acid biosynthetic process;GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PG68-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PD88-1", "uniprot_id": [ { "id": "A0A8M9PD88_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PD88", "type": "external" } ], "mass": 47171.0, "length": 433, "protein_name": "Zinc finger and BTB domain-containing protein 25 isoform X1", "gene_name": "zbtb25", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 25 isoform X1", "refseq_ac": [ { "id": "XP_021329052", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329052", "type": "external" } ], "gene_names_uniprotkb": "zbtb25", "gene_names_refseq": "zbtb25", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 25 isoform X1", "protein_names_refseq": "zinc finger and BTB domain-containing protein 25 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:567401)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1Q574;Q5RIH3", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0002682 regulation of immune system process;GO:0001817 regulation of cytokine production", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PD88-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PD40-1", "uniprot_id": [ { "id": "A0A8M9PD40_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PD40", "type": "external" } ], "mass": 143826.0, "length": 1274, "protein_name": "E3 ubiquitin-protein ligase NEDD4-like", "gene_name": "nedd4l", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase NEDD4-like isoform X1", "refseq_ac": [ { "id": "XP_021324693", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324693", "type": "external" } ], "gene_names_uniprotkb": "nedd4l", "gene_names_refseq": "nedd4l", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase NEDD4-like; 2.3.2.26; HECT-type E3 ubiquitin transferase NED4L", "protein_names_refseq": "E3 ubiquitin-protein ligase NEDD4-like isoform X1", "tax_id": 7955, "disease": "periventricular nodular heterotopia (Disease Ontology:DOID:0050454); Liddle syndrome (Disease Ontology:DOID:0050477); stroke (Disease Ontology:DOID:0051061)", "pathway": " (dre:559634)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019871 sodium channel inhibitor activity;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0005771 multivesicular body", "go_biological_process": "GO:0006811 monoatomic ion transport;GO:0030154 cell differentiation;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process;GO:0010766 negative regulation of sodium ion transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PD40-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PDY1-1", "uniprot_id": [ { "id": "A0A8M9PDY1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PDY1", "type": "external" } ], "mass": 108284.0, "length": 964, "protein_name": "ER membrane protein complex subunit 1", "gene_name": "emc1", "organism": "Zebrafish", "refseq_name": "ER membrane protein complex subunit 1 isoform X1", "refseq_ac": [ { "id": "XP_021329317", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329317", "type": "external" } ], "gene_names_uniprotkb": "emc1", "gene_names_refseq": "emc1", "protein_names_uniprotkb": "ER membrane protein complex subunit 1", "protein_names_refseq": "ER membrane protein complex subunit 1 isoform X1", "tax_id": 7955, "disease": "cerebellar atrophy, visual impairment, and psychomotor retardation (Disease Ontology:DOID:0081276); intestinal cancer (Disease Ontology:DOID:10155)", "pathway": " (dre:565399)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021329317.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0072546 EMC complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PDY1-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PUV2-1", "uniprot_id": [ { "id": "A0A8M9PUV2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PUV2", "type": "external" } ], "mass": 50465.0, "length": 470, "protein_name": "LSM14A mRNA processing body assembly factor a isoform X1", "gene_name": "lsm14aa", "organism": "Zebrafish", "refseq_name": "LSM14A mRNA processing body assembly factor a isoform X1", "refseq_ac": [ { "id": "XP_021326136", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326136", "type": "external" } ], "gene_names_uniprotkb": "lsm14aa; fam61a; lsm14a; wu:fj52e11; zgc:63681; zgc:66203; zgc:77302", "gene_names_refseq": "fam61a; lsm14aa; lsm14a; wu:fj52e11; zgc:63681; zgc:66203; zgc:77302", "protein_names_uniprotkb": "LSM14A mRNA processing body assembly factor a isoform X1", "protein_names_refseq": "LSM14A mRNA processing body assembly factor a isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003729 mRNA binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:1990904 ribonucleoprotein complex;GO:0000932 P-body", "go_biological_process": "GO:0033962 P-body assembly;GO:0034063 stress granule assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PUV2-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKH8-1", "uniprot_id": [ { "id": "A0A8M9PKH8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKH8", "type": "external" } ], "mass": 57445.0, "length": 516, "protein_name": "SPARC-related modular calcium-binding protein 1 isoform X1", "gene_name": "smoc1", "organism": "Zebrafish", "refseq_name": "SPARC-related modular calcium-binding protein 1 isoform X1", "refseq_ac": [ { "id": "XP_021322766", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322766", "type": "external" } ], "gene_names_uniprotkb": "smoc1", "gene_names_refseq": "smoc1", "protein_names_uniprotkb": "SPARC-related modular calcium-binding protein 1 isoform X1", "protein_names_refseq": "SPARC-related modular calcium-binding protein 1 isoform X1", "tax_id": 7955, "disease": "microphthalmia with limb anomalies (Disease Ontology:DOID:0060861)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0050840 extracellular matrix binding;GO:0008201 heparin binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0005604 basement membrane", "go_biological_process": "GO:0002072 optic cup morphogenesis involved in camera-type eye development;GO:0030513 positive regulation of BMP signaling pathway;GO:0001654 eye development;GO:0035138 pectoral fin morphogenesis;GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKH8-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNT9-1", "uniprot_id": [ { "id": "A0A8M9PNT9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNT9", "type": "external" } ], "mass": 175566.0, "length": 1557, "protein_name": "FH1/FH2 domain-containing protein 3 isoform X1", "gene_name": "fhod3a", "organism": "Zebrafish", "refseq_name": "FH1/FH2 domain-containing protein 3 isoform X1", "refseq_ac": [ { "id": "XP_021323896", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323896", "type": "external" } ], "gene_names_uniprotkb": "fhod3a", "gene_names_refseq": "fhod3a", "protein_names_uniprotkb": "FH1/FH2 domain-containing protein 3 isoform X1", "protein_names_refseq": "FH1/FH2 domain-containing protein 3 isoform X1", "tax_id": 7955, "disease": "familial hypertrophic cardiomyopathy (Disease Ontology:DOID:0080326)", "pathway": " (dre:564742)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005737 cytoplasm", "go_biological_process": "GO:0007015 actin filament organization;GO:0051496 positive regulation of stress fiber assembly;GO:0055003 cardiac myofibril assembly;GO:0045214 sarcomere organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PNT9-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PPQ9-1", "uniprot_id": [ { "id": "A0A8M9PPQ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PPQ9", "type": "external" } ], "mass": 168726.0, "length": 1496, "protein_name": "Receptor-type tyrosine-protein phosphatase kappa", "gene_name": "ptprk", "organism": "Zebrafish", "refseq_name": "receptor-type tyrosine-protein phosphatase kappa isoform X1", "refseq_ac": [ { "id": "XP_021324241", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324241", "type": "external" } ], "gene_names_uniprotkb": "ptprk", "gene_names_refseq": "ptprk", "protein_names_uniprotkb": "Receptor-type tyrosine-protein phosphatase kappa; 3.1.3.48", "protein_names_refseq": "receptor-type tyrosine-protein phosphatase kappa isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555348)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Regulation of processes involving cell contact and adhesion such as growth control, tumor invasion, and metastasis. Negative regulator of EGFR signaling pathway. Forms complexes with beta-catenin and gamma-catenin/plakoglobin. Beta-catenin may be a substrate for the catalytic activity of PTPRK/PTP-kappa., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.21", "type": "external" } ], "go_molecular_function": "GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PPQ9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PTQ9-1", "uniprot_id": [ { "id": "A0A8M9PTQ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PTQ9", "type": "external" } ], "mass": 134430.0, "length": 1204, "protein_name": "CRK SH3-binding GNRP", "gene_name": "rapgef1b", "organism": "Zebrafish", "refseq_name": "rap guanine nucleotide exchange factor 1b isoform X1", "refseq_ac": [ { "id": "XP_021324455", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324455", "type": "external" } ], "gene_names_uniprotkb": "rapgef1b; GRF2; rapgef1; zgc:56372", "gene_names_refseq": "GRF2; rapgef1b; rapgef1; zgc:56372", "protein_names_uniprotkb": "CRK SH3-binding GNRP", "protein_names_refseq": "rap guanine nucleotide exchange factor 1b isoform X1", "tax_id": 7955, "disease": "anti-basement membrane glomerulonephritis (Disease Ontology:DOID:4780); mesangial proliferative glomerulonephritis (Disease Ontology:DOID:4783)", "pathway": " (dre:394101)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;33834495", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007264 small GTPase-mediated signal transduction;GO:0032486 Rap protein signal transduction;GO:0010976 positive regulation of neuron projection development;GO:0007265 Ras protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M9PTQ9-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PR23-1", "uniprot_id": [ { "id": "A0A8M9PR23_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PR23", "type": "external" } ], "mass": 214759.0, "length": 1963, "protein_name": "Ankyrin-1", "gene_name": "ank1b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein ank1b isoform X1", "refseq_ac": [ { "id": "XP_021324740", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324740", "type": "external" } ], "gene_names_uniprotkb": "ank1b", "gene_names_refseq": "ank1b", "protein_names_uniprotkb": "Ankyrin-1; Erythrocyte ankyrin", "protein_names_refseq": "uncharacterized protein ank1b isoform X1", "tax_id": 7955, "disease": "hereditary spherocytosis type 1 (Disease Ontology:DOID:0110916); malaria (Disease Ontology:DOID:12365); hereditary spherocytosis (Disease Ontology:DOID:12971); transient cerebral ischemia (Disease Ontology:DOID:224); anemia (Disease Ontology:DOID:2355)", "pathway": " (dre:797662)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021324740.1. COMPLETENESS: full length., [RefSeq]; Component of the ankyrin-1 complex, a multiprotein complex involved in the stability and shape of the erythrocyte membrane. Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein band 4.2, to Na-K ATPase, to the lymphocyte membrane protein GP85, and to the cytoskeletal proteins fodrin, tubulin, vimentin and desmin. Erythrocyte ankyrins also link spectrin (beta chain) to the cytoplasmic domain of the erythrocytes anion exchange protein; they retain most or all of these binding functions., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane;GO:0071944 cell periphery;GO:0014731 spectrin-associated cytoskeleton;GO:0016529 sarcoplasmic reticulum", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PR23-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PQ20-1", "uniprot_id": [ { "id": "A0A8M9PQ20_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PQ20", "type": "external" } ], "mass": 133258.0, "length": 1218, "protein_name": "C2 domain-containing protein 5", "gene_name": "c2cd5", "organism": "Zebrafish", "refseq_name": "C2 domain-containing protein 5 isoform X1", "refseq_ac": [ { "id": "XP_021323279", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323279", "type": "external" } ], "gene_names_uniprotkb": "c2cd5; CH1073-429G16.1; fj43c12; si:ch1073-429g16.1; si:ch73-30n17.4; wu:fj43c12; zgc:63659; zgc:92130", "gene_names_refseq": "CH1073-429G16.1; c2cd5; fj43c12; si:ch1073-429g16.1; si:ch73-30n17.4; wu:fj43c12; zgc:63659; zgc:92130", "protein_names_uniprotkb": "C2 domain-containing protein 5", "protein_names_refseq": "C2 domain-containing protein 5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:393585)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "16237125;26469318;27189481;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0005544 calcium-dependent phospholipid binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005938 cell cortex;GO:0030659 cytoplasmic vesicle membrane;GO:0001726 ruffle", "go_biological_process": "GO:0015031 protein transport;GO:0008286 insulin receptor signaling pathway;GO:0031340 positive regulation of vesicle fusion", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M9PQ20-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PIG6-1", "uniprot_id": [ { "id": "A0A8M9PIG6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PIG6", "type": "external" } ], "mass": 29652.0, "length": 262, "protein_name": "Calcium-binding protein 8 isoform X1", "gene_name": "caln1", "organism": "Zebrafish", "refseq_name": "calcium-binding protein 8 isoform X1", "refseq_ac": [ { "id": "XP_021322021", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322021", "type": "external" } ], "gene_names_uniprotkb": "caln1", "gene_names_refseq": "caln1", "protein_names_uniprotkb": "Calcium-binding protein 8 isoform X1", "protein_names_refseq": "calcium-binding protein 8 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:562420)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0032588 trans-Golgi network membrane;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PIG6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PIH1-1", "uniprot_id": [ { "id": "A0A8M9PIH1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PIH1", "type": "external" } ], "mass": 83312.0, "length": 734, "protein_name": "Probable ATP-dependent RNA helicase DHX40", "gene_name": "dhx40", "organism": "Zebrafish", "refseq_name": "probable ATP-dependent RNA helicase DHX40 isoform X1", "refseq_ac": [ { "id": "XP_021322026", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322026", "type": "external" } ], "gene_names_uniprotkb": "dhx40", "gene_names_refseq": "dhx40", "protein_names_uniprotkb": "Probable ATP-dependent RNA helicase DHX40; 3.6.4.13; DEAH box protein 40", "protein_names_refseq": "probable ATP-dependent RNA helicase DHX40 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:570225)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Probable ATP-dependent RNA helicase., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.3.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.-", "type": "external" }, { "id": "2.3.2.27", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.27", "type": "external" }, { "id": "3.6.4.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.-", "type": "external" }, { "id": "4.2.99.18", "url": "https://www.rhea-db.org/rhea/?query=ec:4.2.99.18", "type": "external" }, { "id": "5.6.2.4", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.4", "type": "external" }, { "id": "5.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.3", "type": "external" }, { "id": "3.6.4.12", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.12", "type": "external" }, { "id": "3.6.4.13", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.13", "type": "external" }, { "id": "2.7.4.3", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.4.3", "type": "external" }, { "id": "7.6.2.2", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.2", "type": "external" }, { "id": "5.6.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.1.6", "type": "external" }, { "id": "7.6.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:7.6.2.3", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.4.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.6", "type": "external" }, { "id": "3.6.1.15", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.15", "type": "external" }, { "id": "3.6.4.10", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.4.10", "type": "external" }, { "id": "5.6.2.-", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.-", "type": "external" }, { "id": "2.7.7.7", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.7", "type": "external" }, { "id": "2.7.7.49", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.49", "type": "external" }, { "id": "5.6.2.5", "url": "https://www.rhea-db.org/rhea/?query=ec:5.6.2.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" } ], "go_molecular_function": "GO:0003723 RNA binding;GO:0005524 ATP binding;GO:0016787 hydrolase activity;GO:0034458 3'-5' RNA helicase activity;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005681 spliceosomal complex", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PIH1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PIT7-1", "uniprot_id": [ { "id": "A0A8M9PIT7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PIT7", "type": "external" } ], "mass": 66244.0, "length": 580, "protein_name": "Neuronal acetylcholine receptor subunit alpha-9 isoform X1", "gene_name": "chrna9a", "organism": "Zebrafish", "refseq_name": "neuronal acetylcholine receptor subunit alpha-9 isoform X1", "refseq_ac": [ { "id": "XP_021326868", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326868", "type": "external" } ], "gene_names_uniprotkb": "chrna9a", "gene_names_refseq": "chrna9a", "protein_names_uniprotkb": "Neuronal acetylcholine receptor subunit alpha-9 isoform X1", "protein_names_refseq": "neuronal acetylcholine receptor subunit alpha-9 isoform X1", "tax_id": 7955, "disease": "nicotine dependence (Disease Ontology:DOID:0050742); lung small cell carcinoma (Disease Ontology:DOID:5409)", "pathway": " (dre:568807)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0022848 acetylcholine-gated monoatomic cation-selective channel activity;GO:0022850 serotonin-gated monoatomic cation channel activity;GO:1904315 transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential;GO:0005231 excitatory extracellular ligand-gated monoatomic ion channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse;GO:0045211 postsynaptic membrane;GO:0043005 neuron projection;GO:1902495 transmembrane transporter complex", "go_biological_process": "GO:0042391 regulation of membrane potential;GO:0007268 chemical synaptic transmission;GO:0034220 monoatomic ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PIT7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PIY6-1", "uniprot_id": [ { "id": "A0A8M9PIY6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PIY6", "type": "external" } ], "mass": 97649.0, "length": 900, "protein_name": "protein-tyrosine-phosphatase", "gene_name": "si:dkey-175m17.7", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-175m17.7", "refseq_ac": [ { "id": "XP_001345798", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001345798", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-175m17.7", "gene_names_refseq": "si:dkey-175m17.7", "protein_names_uniprotkb": "protein-tyrosine-phosphatase; 3.1.3.48", "protein_names_refseq": "uncharacterized protein si:dkey-175m17.7", "tax_id": 7955, "disease": "carcinoma (Disease Ontology:DOID:305)", "pathway": " (dre:100007304)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_001345798.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity;GO:0008330 protein tyrosine/threonine phosphatase activity;GO:0033550 MAP kinase tyrosine phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol", "go_biological_process": "GO:0046329 negative regulation of JNK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PIY6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJ26-1", "uniprot_id": [ { "id": "A0A8M9PJ26_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJ26", "type": "external" } ], "mass": 10549.0, "length": 94, "protein_name": "C-C motif chemokine", "gene_name": "ccl20a.4", "organism": "Zebrafish", "refseq_name": "monocyte chemotactic protein 1B", "refseq_ac": [ { "id": "XP_021326968", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326968", "type": "external" } ], "gene_names_uniprotkb": "ccl20a.4", "gene_names_refseq": "ccl20a.4", "protein_names_uniprotkb": "C-C motif chemokine", "protein_names_refseq": "monocyte chemotactic protein 1B", "tax_id": 7955, "disease": "exanthem (Disease Ontology:DOID:0050486); primary cutaneous T-cell non-Hodgkin lymphoma (Disease Ontology:DOID:0060061); anogenital venereal wart (Disease Ontology:DOID:11168); Lyme disease (Disease Ontology:DOID:11729); fungal infectious disease (Disease Ontology:DOID:1564); pancreatic cancer (Disease Ontology:DOID:1793); acrodermatitis (Disease Ontology:DOID:2722); asthma (Disease Ontology:DOID:2841); IgA glomerulonephritis (Disease Ontology:DOID:2986); skin papilloma (Disease Ontology:DOID:3178); atopic dermatitis (Disease Ontology:DOID:3310); systemic scleroderma (Disease Ontology:DOID:418); psoriasis (Disease Ontology:DOID:8893)", "pathway": " (dre:100334296)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 13, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008009 chemokine activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006954 inflammatory response;GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PJ26-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJ89-1", "uniprot_id": [ { "id": "A0A8M9PJ89_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJ89", "type": "external" } ], "mass": 100414.0, "length": 904, "protein_name": "Folliculin-interacting protein 2 isoform X1", "gene_name": "fnip2", "organism": "Zebrafish", "refseq_name": "folliculin-interacting protein 2 isoform X1", "refseq_ac": [ { "id": "XP_021331522", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331522", "type": "external" } ], "gene_names_uniprotkb": "fnip2; si:ch211-42i9.8", "gene_names_refseq": "fnip2; si:ch211-42i9.8", "protein_names_uniprotkb": "Folliculin-interacting protein 2 isoform X1", "protein_names_refseq": "folliculin-interacting protein 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:797213)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15520368;26469318;27189481;31404503", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051087 protein-folding chaperone binding;GO:0042030 ATPase inhibitor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005765 lysosomal membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M9PJ89-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJB1-1", "uniprot_id": [ { "id": "A0A8M9PJB1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJB1", "type": "external" } ], "mass": 209389.0, "length": 1873, "protein_name": "Histone-lysine N-methyltransferase, H3 lysine-36 specific", "gene_name": "nsd1b", "organism": "Zebrafish", "refseq_name": "histone-lysine N-methyltransferase, H3 lysine-36 specific isoform X1", "refseq_ac": [ { "id": "XP_005173940", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173940", "type": "external" } ], "gene_names_uniprotkb": "nsd1b", "gene_names_refseq": "nsd1b", "protein_names_uniprotkb": "Histone-lysine N-methyltransferase, H3 lysine-36 specific; 2.1.1.357; H3-K36-HMTase; Nuclear receptor-binding SET domain-containing protein 1", "protein_names_refseq": "histone-lysine N-methyltransferase, H3 lysine-36 specific isoform X1", "tax_id": 7955, "disease": "Sotos syndrome 1 (Disease Ontology:DOID:0112103); microcephaly (Disease Ontology:DOID:10907); Sotos syndrome (Disease Ontology:DOID:14748); syndrome (Disease Ontology:DOID:225); neuroblastoma (Disease Ontology:DOID:769); acute myeloid leukemia (Disease Ontology:DOID:9119)", "pathway": " (dre:564592)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F1Q9U9", "ec_number_list": [ { "id": "2.1.1.357", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.1.357", "type": "external" } ], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003712 transcription coregulator activity;GO:0016922 nuclear receptor binding;GO:0046975 histone H3K36 methyltransferase activity;GO:0140954 histone H3K36 dimethyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0000785 chromatin;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0032259 methylation;GO:0031507 heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PJB1-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJD6-1", "uniprot_id": [ { "id": "A0A8M9PJD6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJD6", "type": "external" } ], "mass": 66896.0, "length": 596, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC563925", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_021331567", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331567", "type": "external" } ], "gene_names_uniprotkb": "LOC563925", "gene_names_refseq": "LOC563925", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:563925)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021331567.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PJD6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJE3-1", "uniprot_id": [ { "id": "A0A8M9PJE3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJE3", "type": "external" } ], "mass": 61373.0, "length": 549, "protein_name": "Solute carrier family 22 member 4", "gene_name": "slc22a5", "organism": "Zebrafish", "refseq_name": "solute carrier family 22 member 4", "refseq_ac": [ { "id": "XP_021324939", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324939", "type": "external" } ], "gene_names_uniprotkb": "slc22a5", "gene_names_refseq": "slc22a5", "protein_names_uniprotkb": "Solute carrier family 22 member 4", "protein_names_refseq": "solute carrier family 22 member 4", "tax_id": 7955, "disease": "cardiomyopathy (Disease Ontology:DOID:0050700); myelodysplastic syndrome (Disease Ontology:DOID:0050908); metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208); systemic primary carnitine deficiency disease (Disease Ontology:DOID:14365); chronic obstructive pulmonary disease (Disease Ontology:DOID:3083); congestive heart failure (Disease Ontology:DOID:6000); inherited metabolic disorder (Disease Ontology:DOID:655); Crohn's disease (Disease Ontology:DOID:8778)", "pathway": " (dre:100000685)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 8, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IBQ4;A0AC58IBQ6", "ec_number_list": [], "go_molecular_function": "GO:0015651 quaternary ammonium group transmembrane transporter activity;GO:0005524 ATP binding;GO:0015226 carnitine transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0015697 quaternary ammonium group transport;GO:0006811 monoatomic ion transport;GO:0006783 heme biosynthetic process;GO:0015879 carnitine transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PJE3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJH5-1", "uniprot_id": [ { "id": "A0A8M9PJH5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJH5", "type": "external" } ], "mass": 64707.0, "length": 576, "protein_name": "Matrix metalloproteinase-25 isoform X2", "gene_name": "mmp25a", "organism": "Zebrafish", "refseq_name": "matrix metallopeptidase 25a", "refseq_ac": [ { "id": "NP_001427818", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001427818", "type": "external" } ], "gene_names_uniprotkb": "mmp25a", "gene_names_refseq": "mmp25a; si:ch73-248e21.6", "protein_names_uniprotkb": "Matrix metalloproteinase-25 isoform X2", "protein_names_refseq": "MMPLa; matrix metallopeptidase 25a; mmp25", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588730.16970576.1, SRR32588718.25739916.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Jun 3, 2025 this sequence version replaced XP_021327128.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 1, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008270 zinc ion binding;GO:0008237 metallopeptidase activity", "go_cellular_component": "GO:0005615 extracellular space;GO:0031012 extracellular matrix", "go_biological_process": "GO:0006508 proteolysis;GO:0030198 extracellular matrix organization;GO:0030574 collagen catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PJH5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001001.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJP1-1", "uniprot_id": [ { "id": "A0A8M9PJP1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJP1", "type": "external" } ], "mass": 117078.0, "length": 1068, "protein_name": "Uncharacterized protein si:ch211-13f8.1 isoform X1", "gene_name": "si:ch211-13f8.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-13f8.1 isoform X1", "refseq_ac": [ { "id": "XP_021322446", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322446", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-13f8.1", "gene_names_refseq": "si:ch211-13f8.1", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-13f8.1 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch211-13f8.1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882577)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005938 cell cortex;GO:0016324 apical plasma membrane", "go_biological_process": "GO:0060341 regulation of cellular localization;GO:0007098 centrosome cycle;GO:0007163 establishment or maintenance of cell polarity", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PJP1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJQ9-1", "uniprot_id": [ { "id": "A0A8M9PJQ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJQ9", "type": "external" } ], "mass": 77162.0, "length": 687, "protein_name": "threonine--tRNA ligase", "gene_name": "tars2", "organism": "Zebrafish", "refseq_name": "threonine--tRNA ligase 1, cytoplasmic isoform X1", "refseq_ac": [ { "id": "XP_021322466", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322466", "type": "external" } ], "gene_names_uniprotkb": "tars2", "gene_names_refseq": "tars2", "protein_names_uniprotkb": "threonine--tRNA ligase; 6.1.1.3; Threonyl-tRNA synthetase", "protein_names_refseq": "threonine--tRNA ligase 1, cytoplasmic isoform X1", "tax_id": 7955, "disease": "combined oxidative phosphorylation deficiency 21 (Disease Ontology:DOID:0111465); nonphotosensitive trichothiodystrophy (Disease Ontology:DOID:0111867); amino acid metabolic disorder (Disease Ontology:DOID:9252)", "pathway": " (dre:100333765)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021322466.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "6.1.1.3", "url": "https://www.rhea-db.org/rhea/?query=ec:6.1.1.3", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004829 threonine-tRNA ligase activity;GO:0016874 ligase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0048741 skeletal muscle fiber development;GO:0021549 cerebellum development;GO:0006435 threonyl-tRNA aminoacylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PJQ9-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJW6-1", "uniprot_id": [ { "id": "A0A8M9PJW6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJW6", "type": "external" } ], "mass": 221612.0, "length": 1936, "protein_name": "Myosin heavy chain, fast skeletal muscle", "gene_name": "myhz1.1l", "organism": "Zebrafish", "refseq_name": "myosin heavy chain, fast skeletal muscle", "refseq_ac": [ { "id": "XP_021325144", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325144", "type": "external" } ], "gene_names_uniprotkb": "myhz1.1l", "gene_names_refseq": "myhz1.1l", "protein_names_uniprotkb": "Myosin heavy chain, fast skeletal muscle", "protein_names_refseq": "myosin heavy chain, fast skeletal muscle", "tax_id": 7955, "disease": "distal arthrogryposis (Disease Ontology:DOID:0050646); cardiomyopathy (Disease Ontology:DOID:0050700); familial hypertrophic cardiomyopathy (Disease Ontology:DOID:0080326); congenital myopathy 6 (Disease Ontology:DOID:0080719); dilated cardiomyopathy 1S (Disease Ontology:DOID:0110454); autosomal dominant hyaline body myopathy (Disease Ontology:DOID:0111269); distal arthrogryposis type 1 (Disease Ontology:DOID:0111596); distal arthrogryposis type 2B3 (Disease Ontology:DOID:0111602); distal arthrogryposis type 2A (Disease Ontology:DOID:0111605); sciatic neuropathy (Disease Ontology:DOID:11446); distal myopathy (Disease Ontology:DOID:11720); dilated cardiomyopathy (Disease Ontology:DOID:12930); myotonia congenita (Disease Ontology:DOID:2106); inclusion body myositis (Disease Ontology:DOID:3429); restrictive cardiomyopathy (Disease Ontology:DOID:397); myopathy (Disease Ontology:DOID:423)", "pathway": " (dre:100008376)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 16, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0032982 myosin filament;GO:0030016 myofibril;GO:0016460 myosin II complex", "go_biological_process": "GO:0048731 system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PJW6-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PN97-1", "uniprot_id": [ { "id": "A0A8M9PN97_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PN97", "type": "external" } ], "mass": 143826.0, "length": 1285, "protein_name": "Anion exchange protein", "gene_name": "slc4a7", "organism": "Zebrafish", "refseq_name": "sodium bicarbonate cotransporter 3 isoform X8", "refseq_ac": [ { "id": "XP_021322675", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322675", "type": "external" } ], "gene_names_uniprotkb": "slc4a7", "gene_names_refseq": "slc4a7", "protein_names_uniprotkb": "Anion exchange protein", "protein_names_refseq": "sodium bicarbonate cotransporter 3 isoform X8", "tax_id": 7955, "disease": "Usher syndrome type 2C (Disease Ontology:DOID:0110839); anemia (Disease Ontology:DOID:2355)", "pathway": " (dre:568872)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008509 monoatomic anion transmembrane transporter activity;GO:0015081 sodium ion transmembrane transporter activity;GO:0005452 solute:inorganic anion antiporter activity;GO:0015106 bicarbonate transmembrane transporter activity;GO:0008510 sodium:bicarbonate symporter activity", "go_cellular_component": "GO:0016323 basolateral plasma membrane;GO:0016324 apical plasma membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0015701 bicarbonate transport;GO:0051453 regulation of intracellular pH", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PN97-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKB0-1", "uniprot_id": [ { "id": "A0A8M9PKB0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKB0", "type": "external" } ], "mass": 31540.0, "length": 275, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "si:ch211-151m7.3", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-2", "refseq_ac": [ { "id": "XP_021322691", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322691", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-151m7.3", "gene_names_refseq": "si:ch211-151m7.3", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-2", "tax_id": 7955, "disease": "", "pathway": " (dre:503990)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021322691.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKB0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKI0-1", "uniprot_id": [ { "id": "A0A8M9PKI0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKI0", "type": "external" } ], "mass": 112949.0, "length": 1019, "protein_name": "Signal peptide, CUB and EGF-like domain-containing protein 2", "gene_name": "scube3", "organism": "Zebrafish", "refseq_name": "signal peptide, CUB and EGF-like domain-containing protein 3 isoform X1", "refseq_ac": [ { "id": "XP_021325384", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325384", "type": "external" } ], "gene_names_uniprotkb": "scube3", "gene_names_refseq": "scube3", "protein_names_uniprotkb": "Signal peptide, CUB and EGF-like domain-containing protein 2; Signal peptide, CUB and EGF-like domain-containing protein 3", "protein_names_refseq": "signal peptide, CUB and EGF-like domain-containing protein 3 isoform X1", "tax_id": 7955, "disease": "short stature, facial dysmorphism, and skeletal anomalies with or without cardiac anomalies 2 (Disease Ontology:DOID:0112358)", "pathway": " (dre:100000687)", "pathway_count": 1, "publication_count": 9, "publication_id_list": "16626681;22609552;23271740;24849601;26469318;27189481;28274275;31249862;33788916", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0009986 cell surface;GO:0005576 extracellular region", "go_biological_process": "GO:0007165 signal transduction;GO:0048741 skeletal muscle fiber development;GO:0009966 regulation of signal transduction;GO:0045669 positive regulation of osteoblast differentiation;GO:0007224 smoothened signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.0, "record_id": "A0A8M9PKI0-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKK5-1", "uniprot_id": [ { "id": "A0A8M9PKK5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKK5", "type": "external" } ], "mass": 46721.0, "length": 416, "protein_name": "Ubiquitin-associated domain-containing protein 1", "gene_name": "ubac1", "organism": "Zebrafish", "refseq_name": "ubiquitin-associated domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_021331997", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331997", "type": "external" } ], "gene_names_uniprotkb": "ubac1; fj67a11; si:dkey-1o2.1; si:dkey-5f20.1; wu:fj67a11", "gene_names_refseq": "fj67a11; si:dkey-1o2.1; si:dkey-5f20.1; ubac1; wu:fj67a11", "protein_names_uniprotkb": "Ubiquitin-associated domain-containing protein 1; Kip1 ubiquitination-promoting complex protein 2", "protein_names_refseq": "ubiquitin-associated domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0000151 ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKK5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKN0-1", "uniprot_id": [ { "id": "A0A8M9PKN0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKN0", "type": "external" } ], "mass": 56641.0, "length": 487, "protein_name": "Regulator of G-protein signaling 7a isoform X1", "gene_name": "rgs7a", "organism": "Zebrafish", "refseq_name": "regulator of G-protein signaling 7a isoform X1", "refseq_ac": [ { "id": "XP_073783279", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073783279", "type": "external" } ], "gene_names_uniprotkb": "rgs7a; rgs7; zgc:92793", "gene_names_refseq": "rgs7a; rgs7; zgc:92793", "protein_names_uniprotkb": "Regulator of G-protein signaling 7a isoform X1", "protein_names_refseq": "regulator of G-protein signaling 7a isoform X1", "tax_id": 7955, "disease": "depressive disorder (Disease Ontology:DOID:1596)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HMR7", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0043005 neuron projection", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0035556 intracellular signal transduction;GO:0009968 negative regulation of signal transduction;GO:0008277 regulation of G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKN0-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKP3-1", "uniprot_id": [ { "id": "A0A8M9PKP3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKP3", "type": "external" } ], "mass": 44599.0, "length": 399, "protein_name": "LEM domain-containing protein 1 isoform X1", "gene_name": "lemd1", "organism": "Zebrafish", "refseq_name": "LEM domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_068072830", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068072830", "type": "external" } ], "gene_names_uniprotkb": "lemd1; zgc:92287", "gene_names_refseq": "lemd1; zgc:92287", "protein_names_uniprotkb": "LEM domain-containing protein 1 isoform X1", "protein_names_refseq": "LEM domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "Emery-Dreifuss muscular dystrophy (Disease Ontology:DOID:11726)", "pathway": " (dre:436879)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005635 nuclear envelope", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKP3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKS5-1", "uniprot_id": [ { "id": "A0A8M9PKS5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKS5", "type": "external" } ], "mass": 62569.0, "length": 572, "protein_name": "Nuclear receptor subfamily 1, group D, member 4a isoform X1", "gene_name": "nr1d4a", "organism": "Zebrafish", "refseq_name": "nuclear receptor subfamily 1, group D, member 4a isoform X1", "refseq_ac": [ { "id": "XP_021325494", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325494", "type": "external" } ], "gene_names_uniprotkb": "nr1d4a; gb:dq017622", "gene_names_refseq": "gb:dq017622; nr1d4a", "protein_names_uniprotkb": "Nuclear receptor subfamily 1, group D, member 4a isoform X1", "protein_names_refseq": "nuclear receptor subfamily 1, group D, member 4a isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0004879 nuclear receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0030154 cell differentiation;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0009755 hormone-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKS5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKU5-1", "uniprot_id": [ { "id": "A0A8M9PKU5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKU5", "type": "external" } ], "mass": 247344.0, "length": 2160, "protein_name": "Unconventional myosin-VIIa isoform X1", "gene_name": "myo7bb", "organism": "Zebrafish", "refseq_name": "unconventional myosin-VIIa isoform X1", "refseq_ac": [ { "id": "XP_073781487", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073781487", "type": "external" } ], "gene_names_uniprotkb": "myo7bb", "gene_names_refseq": "myo7bb", "protein_names_uniprotkb": "Unconventional myosin-VIIa isoform X1", "protein_names_refseq": "unconventional myosin-VIIa isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HHI1", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0005524 ATP binding;GO:0003774 cytoskeletal motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016459 myosin complex", "go_biological_process": "GO:0048731 system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKU5-1", "record_type": "protein", "filter_code": "0000000.0000000.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKV2-1", "uniprot_id": [ { "id": "A0A8M9PKV2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKV2", "type": "external" } ], "mass": 779742.0, "length": 7136, "protein_name": "Uncharacterized protein unc13ba isoform X1", "gene_name": "unc13ba", "organism": "Zebrafish", "refseq_name": "uncharacterized protein unc13ba isoform X1", "refseq_ac": [ { "id": "XP_021332097", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332097", "type": "external" } ], "gene_names_uniprotkb": "unc13ba", "gene_names_refseq": "unc13ba", "protein_names_uniprotkb": "Uncharacterized protein unc13ba isoform X1", "protein_names_refseq": "uncharacterized protein unc13ba isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100535393)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005543 phospholipid binding;GO:0008270 zinc ion binding;GO:0005509 calcium ion binding;GO:0019992 diacylglycerol binding", "go_cellular_component": "GO:0098793 presynapse", "go_biological_process": "GO:0007268 chemical synaptic transmission;GO:0006887 exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKV2-1", "record_type": "protein", "filter_code": "0000000.0000001.000010.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKW2-1", "uniprot_id": [ { "id": "A0A8M9PKW2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKW2", "type": "external" } ], "mass": 268694.0, "length": 2386, "protein_name": "acetyl-CoA carboxylase", "gene_name": "acacb", "organism": "Zebrafish", "refseq_name": "acetyl-CoA carboxylase 2 isoform X1", "refseq_ac": [ { "id": "XP_021332107", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332107", "type": "external" } ], "gene_names_uniprotkb": "acacb", "gene_names_refseq": "acacb", "protein_names_uniprotkb": "acetyl-CoA carboxylase; 6.4.1.2", "protein_names_refseq": "acetyl-CoA carboxylase 2 isoform X1", "tax_id": 7955, "disease": "chromosome 17q12 deletion syndrome (Disease Ontology:DOID:0060404); muscular disease (Disease Ontology:DOID:0080000); metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208); steatotic liver disease (Disease Ontology:DOID:9452); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:556236)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JNU1;A0AC58JNX1", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0003989 acetyl-CoA carboxylase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006633 fatty acid biosynthetic process;GO:2001295 malonyl-CoA biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKW2-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PKX9-1", "uniprot_id": [ { "id": "A0A8M9PKX9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PKX9", "type": "external" } ], "mass": 23251.0, "length": 204, "protein_name": "Gremlin-1", "gene_name": "grem1b", "organism": "Zebrafish", "refseq_name": "gremlin-1", "refseq_ac": [ { "id": "XP_021322921", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322921", "type": "external" } ], "gene_names_uniprotkb": "grem1b", "gene_names_refseq": "grem1b", "protein_names_uniprotkb": "Gremlin-1", "protein_names_refseq": "gremlin-1", "tax_id": 7955, "disease": "", "pathway": " (dre:100005728)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021322921.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005125 cytokine activity;GO:0048018 receptor ligand activity;GO:0036122 BMP binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0038098 sequestering of BMP from receptor via BMP binding", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PKX9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PLL4-1", "uniprot_id": [ { "id": "A0A8M9PLL4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PLL4", "type": "external" } ], "mass": 75781.0, "length": 692, "protein_name": "Leucine-rich repeat transmembrane protein FLRT1", "gene_name": "flrt1a", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat transmembrane protein FLRT1", "refseq_ac": [ { "id": "XP_021332357", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332357", "type": "external" } ], "gene_names_uniprotkb": "flrt1a", "gene_names_refseq": "flrt1a", "protein_names_uniprotkb": "Leucine-rich repeat transmembrane protein FLRT1", "protein_names_refseq": "leucine-rich repeat transmembrane protein FLRT1", "tax_id": 7955, "disease": "", "pathway": " (dre:100144402)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JMN0;A0AC58JMN2", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PLL4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PLR3-1", "uniprot_id": [ { "id": "A0A8M9PLR3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PLR3", "type": "external" } ], "mass": 35816.0, "length": 323, "protein_name": "Probable G-protein coupled receptor 132", "gene_name": "gpr132a", "organism": "Zebrafish", "refseq_name": "probable G-protein coupled receptor 132", "refseq_ac": [ { "id": "XP_021323201", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323201", "type": "external" } ], "gene_names_uniprotkb": "gpr132a", "gene_names_refseq": "gpr132a", "protein_names_uniprotkb": "Probable G-protein coupled receptor 132", "protein_names_refseq": "probable G-protein coupled receptor 132", "tax_id": 7955, "disease": "autoimmune disease (Disease Ontology:DOID:417)", "pathway": " (dre:797380)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HPP7;A0AC58HPQ5;A0AC58HPQ9;A0AC58HPT3", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0000082 G1/S transition of mitotic cell cycle;GO:0010447 response to acidic pH;GO:0010972 negative regulation of G2/M transition of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PLR3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PLR5-1", "uniprot_id": [ { "id": "A0A8M9PLR5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PLR5", "type": "external" } ], "mass": 83555.0, "length": 735, "protein_name": "Phosphatidylinositol 3-kinase regulatory subunit gamma", "gene_name": "pik3r3b", "organism": "Zebrafish", "refseq_name": "phosphoinositide-3-kinase, regulatory subunit 3b (gamma) isoform 6", "refseq_ac": [ { "id": "NP_001429113", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429113", "type": "external" } ], "gene_names_uniprotkb": "pik3r3b; pik3r3; zgc:55564; zgc:85710", "gene_names_refseq": "pik3r3b; pik3r3; zgc:55564; zgc:85710", "protein_names_uniprotkb": "Phosphatidylinositol 3-kinase regulatory subunit gamma; p55PIK", "protein_names_refseq": "phosphoinositide-3-kinase, regulatory subunit 3b (gamma) isoform 6; phosphoinositide-3-kinase, regulatory subunit, polypeptide 3 (p55, gamma)", "tax_id": 7955, "disease": "colon adenocarcinoma (Disease Ontology:DOID:234); high grade glioma (Disease Ontology:DOID:3070); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395050.1077506.1, SRR26395039.882485.1 [ECO:0000332] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000006.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Binds to activated (phosphorylated) protein-tyrosine kinases through its SH2 domain and regulates their kinase activity. During insulin stimulation, it also binds to IRS-1., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046935 1-phosphatidylinositol-3-kinase regulator activity", "go_cellular_component": "GO:0005943 phosphatidylinositol 3-kinase complex, class IA", "go_biological_process": "GO:0008286 insulin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PLR5-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PLS5-1", "uniprot_id": [ { "id": "A0A8M9PLS5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PLS5", "type": "external" } ], "mass": 49181.0, "length": 436, "protein_name": "Cytotoxic and regulatory T-cell molecule", "gene_name": "crtam", "organism": "Zebrafish", "refseq_name": "cytotoxic and regulatory T-cell molecule", "refseq_ac": [ { "id": "XP_005172764", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172764", "type": "external" } ], "gene_names_uniprotkb": "crtam", "gene_names_refseq": "crtam", "protein_names_uniprotkb": "Cytotoxic and regulatory T-cell molecule", "protein_names_refseq": "cytotoxic and regulatory T-cell molecule", "tax_id": 7955, "disease": "", "pathway": " (dre:101884219)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7EY51", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0002355 detection of tumor cell;GO:0008037 cell recognition;GO:0002860 positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PLS5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PLT9-1", "uniprot_id": [ { "id": "A0A8M9PLT9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PLT9", "type": "external" } ], "mass": 56740.0, "length": 508, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC100333446", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-2-like", "refseq_ac": [ { "id": "XP_021328003", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328003", "type": "external" } ], "gene_names_uniprotkb": "LOC100333446", "gene_names_refseq": "LOC100333446", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:100333446)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021328003.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PLT9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PLX6-1", "uniprot_id": [ { "id": "A0A8M9PLX6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PLX6", "type": "external" } ], "mass": 45436.0, "length": 401, "protein_name": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase", "gene_name": "st3gal3a", "organism": "Zebrafish", "refseq_name": "ST3 beta-galactoside alpha-2,3-sialyltransferase 3a isoform X1", "refseq_ac": [ { "id": "XP_021332477", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332477", "type": "external" } ], "gene_names_uniprotkb": "st3gal3a; siat6; st3ga3-r; st3gal3; zgc:63978", "gene_names_refseq": "siat6; st3ga3-r; st3gal3a; st3gal3; zgc:63978", "protein_names_uniprotkb": "CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase; 2.4.3.6; Beta-galactoside alpha-2,3-sialyltransferase 3; Gal beta-1,3(4) GlcNAc alpha-2,3 sialyltransferase; N-acetyllactosaminide alpha-2,3-sialyltransferase; ST3Gal III; ST3N; Sialyltransferase 6", "protein_names_refseq": "ST3 beta-galactoside alpha-2,3-sialyltransferase 3a isoform X1", "tax_id": 7955, "disease": "developmental and epileptic encephalopathy 15 (Disease Ontology:DOID:0080414); autosomal recessive intellectual developmental disorder 12 (Disease Ontology:DOID:0081180)", "pathway": " (dre:393326)", "pathway_count": 1, "publication_count": 6, "publication_id_list": "15520368;15843597;22352757;25534026;26469318;30405127", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Catalyzes the formation of the NeuAc-alpha-2,3-Gal-beta-1,4-GlcNAc-, NeuAc-alpha-2,3-Gal-beta-1,3-GlcNAc- and NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc- sequences found in terminal carbohydrate groups of glycoproteins and glycolipids. The highest activity is toward Gal-beta-1,3-GlcNAc and the lowest toward Gal-beta-1,3-GalNAc., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.4.3.6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.3.6", "type": "external" } ], "go_molecular_function": "GO:0008373 sialyltransferase activity;GO:0008118 N-acetyllactosaminide alpha-2,3-sialyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0032580 Golgi cisterna membrane", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A0A8M9PLX6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PM80-1", "uniprot_id": [ { "id": "A0A8M9PM80_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PM80", "type": "external" } ], "mass": 106538.0, "length": 961, "protein_name": "Breast cancer anti-estrogen resistance protein 1", "gene_name": "bcar1", "organism": "Zebrafish", "refseq_name": "breast cancer anti-estrogen resistance protein 1 isoform X1", "refseq_ac": [ { "id": "XP_021323361", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323361", "type": "external" } ], "gene_names_uniprotkb": "bcar1; fc17f11; wu:fc17f11; zgc:175192", "gene_names_refseq": "bcar1; fc17f11; wu:fc17f11; zgc:175192", "protein_names_uniprotkb": "Breast cancer anti-estrogen resistance protein 1; CRK-associated substrate; p130cas", "protein_names_refseq": "breast cancer anti-estrogen resistance protein 1 isoform X1", "tax_id": 7955, "disease": "breast cancer (Disease Ontology:DOID:1612); breast ductal carcinoma (Disease Ontology:DOID:3007)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0017124 SH3 domain binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005925 focal adhesion;GO:0030424 axon", "go_biological_process": "GO:0007155 cell adhesion;GO:0007169 cell surface receptor protein tyrosine kinase signaling pathway;GO:0016477 cell migration;GO:1903670 regulation of sprouting angiogenesis;GO:1901490 regulation of lymphangiogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PM80-1", "record_type": "protein", "filter_code": "0000000.0000010.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PMA6-1", "uniprot_id": [ { "id": "A0A8M9PMA6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PMA6", "type": "external" } ], "mass": 44473.0, "length": 399, "protein_name": "Butyrophilin-like protein 9 isoform X1", "gene_name": "hhla2b.1", "organism": "Zebrafish", "refseq_name": "butyrophilin-like protein 9 isoform X1", "refseq_ac": [ { "id": "XP_021326004", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326004", "type": "external" } ], "gene_names_uniprotkb": "hhla2b.1", "gene_names_refseq": "hhla2b.1", "protein_names_uniprotkb": "Butyrophilin-like protein 9 isoform X1", "protein_names_refseq": "butyrophilin-like protein 9 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:103909755)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009897 external side of plasma membrane;GO:0005886 plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007166 cell surface receptor signaling pathway;GO:0031295 T cell costimulation;GO:0042130 negative regulation of T cell proliferation;GO:0071222 cellular response to lipopolysaccharide", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PMA6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PME6-1", "uniprot_id": [ { "id": "A0A8M9PME6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PME6", "type": "external" } ], "mass": 393803.0, "length": 3626, "protein_name": "Cubilin", "gene_name": "cubn", "organism": "Zebrafish", "refseq_name": "cubilin", "refseq_ac": [ { "id": "XP_021326049", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326049", "type": "external" } ], "gene_names_uniprotkb": "cubn", "gene_names_refseq": "cubn", "protein_names_uniprotkb": "Cubilin", "protein_names_refseq": "cubilin", "tax_id": 7955, "disease": "pre-eclampsia (Disease Ontology:DOID:10591); coronary artery disease (Disease Ontology:DOID:3393); kidney disease (Disease Ontology:DOID:557)", "pathway": " (dre:100144772)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021326049.1. COMPLETENESS: full length., [RefSeq]; Endocytic receptor which plays a role in lipoprotein, vitamin and iron metabolism by facilitating their uptake. Acts together with LRP2 to mediate endocytosis of high-density lipoproteins, GC, hemoglobin, ALB, TF and SCGB1A1. Acts together with AMN to mediate endocytosis of the CBLIF-cobalamin complex. Binds to ALB, MB, Kappa and lambda-light chains, TF, hemoglobin, GC, SCGB1A1, APOA1, high density lipoprotein, and the CBLIF-cobalamin complex. Ligand binding requires calcium. Serves as important transporter in several absorptive epithelia, including intestine, renal proximal tubules and embryonic yolk sac. May play an important role in the development of the peri-implantation embryo through internalization of APOA1 and cholesterol. Binds to LGALS3 at the maternal-fetal interface., [UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0005509 calcium ion binding;GO:0031419 cobalamin binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0005768 endosome;GO:0005765 lysosomal membrane;GO:0016324 apical plasma membrane", "go_biological_process": "GO:0008203 cholesterol metabolic process;GO:0015031 protein transport;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PME6-1", "record_type": "protein", "filter_code": "0000000.0000011.001000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PMF7-1", "uniprot_id": [ { "id": "A0A8M9PMF7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PMF7", "type": "external" } ], "mass": 304972.0, "length": 2664, "protein_name": "Zinc finger protein 1035", "gene_name": "znf1035", "organism": "Zebrafish", "refseq_name": "zinc finger protein 1035", "refseq_ac": [ { "id": "NP_001315144", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001315144", "type": "external" } ], "gene_names_uniprotkb": "znf1035; im:7152997; si:dkeyp-84f3.7", "gene_names_refseq": "im:7152997; si:dkeyp-84f3.7; znf1035", "protein_names_uniprotkb": "Zinc finger protein 1035", "protein_names_refseq": "zinc finger protein 1035", "tax_id": 7955, "disease": "", "pathway": " (dre:504111); (R-DRE-9843940)", "pathway_count": 2, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01021827.1, GDQH01004900.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505373, SAMEA3505377 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1 and CT690268.2. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "X1WH58", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000976 transcription cis-regulatory region binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M9PMF7-1", "record_type": "protein", "filter_code": "0000000.0000101.001000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PMP9-1", "uniprot_id": [ { "id": "A0A8M9PMP9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PMP9", "type": "external" } ], "mass": 48354.0, "length": 420, "protein_name": "Hexosyltransferase", "gene_name": "b3gnt2l", "organism": "Zebrafish", "refseq_name": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "refseq_ac": [ { "id": "XP_001335117", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001335117", "type": "external" } ], "gene_names_uniprotkb": "b3gnt2l", "gene_names_refseq": "b3gnt2l", "protein_names_uniprotkb": "Hexosyltransferase; 2.4.1.-", "protein_names_refseq": "N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:797513); (R-DRE-913709)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HUM8;A2BIK3", "ec_number_list": [ { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" }, { "id": "2.4.1.206", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.206", "type": "external" } ], "go_molecular_function": "GO:0008532 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity;GO:0016262 protein N-acetylglucosaminyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0009101 glycoprotein biosynthetic process;GO:0030311 poly-N-acetyllactosamine biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PMP9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PMQ6-1", "uniprot_id": [ { "id": "A0A8M9PMQ6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PMQ6", "type": "external" } ], "mass": 115511.0, "length": 1008, "protein_name": "Dual specificity phosphatase 29", "gene_name": "LOC110437962", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_021322475", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322475", "type": "external" } ], "gene_names_uniprotkb": "LOC110437962", "gene_names_refseq": "LOC110437962", "protein_names_uniprotkb": "Dual specificity phosphatase 29; 3.1.3.16; 3.1.3.48; Dual specificity phosphatase DUPD1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:110437962)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021322475.2. COMPLETENESS: full length., [RefSeq]; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues within the same substrate, with a preference for phosphotyrosine as a substrate. Involved in the modulation of AMPK and MAPK1/2 signaling pathways., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.21", "type": "external" } ], "go_molecular_function": "GO:0004722 protein serine/threonine phosphatase activity;GO:0008138 protein tyrosine/serine/threonine phosphatase activity;GO:0033549 MAP kinase phosphatase activity;GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0043409 negative regulation of MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PMQ6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PMR8-1", "uniprot_id": [ { "id": "A0A8M9PMR8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PMR8", "type": "external" } ], "mass": 136989.0, "length": 1248, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "hipk3a", "organism": "Zebrafish", "refseq_name": "homeodomain-interacting protein kinase 3a isoform X1", "refseq_ac": [ { "id": "XP_021326179", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326179", "type": "external" } ], "gene_names_uniprotkb": "hipk3a; si:dkey-21k24.2", "gene_names_refseq": "hipk3a; si:dkey-21k24.2", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "homeodomain-interacting protein kinase 3a isoform X1", "tax_id": 7955, "disease": "Parkinson's disease (Disease Ontology:DOID:14330); depressive disorder (Disease Ontology:DOID:1596); cancer (Disease Ontology:DOID:162)", "pathway": " (dre:564413)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "18618001;26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0003677 DNA binding;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005737 cytoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0071466 cellular response to xenobiotic stimulus", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M9PMR8-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PMU2-1", "uniprot_id": [ { "id": "A0A8M9PMU2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PMU2", "type": "external" } ], "mass": 56574.0, "length": 508, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC110438962", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-2-like", "refseq_ac": [ { "id": "XP_073776775", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073776775", "type": "external" } ], "gene_names_uniprotkb": "LOC110438962; LOC141377127", "gene_names_refseq": "LOC141377127", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:110438962)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58H475", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PMU2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PN08-1", "uniprot_id": [ { "id": "A0A8M9PN08_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PN08", "type": "external" } ], "mass": 138715.0, "length": 1241, "protein_name": "VPS10 domain-containing receptor SorCS1 isoform X1", "gene_name": "sorcs1", "organism": "Zebrafish", "refseq_name": "VPS10 domain-containing receptor SorCS1 isoform X1", "refseq_ac": [ { "id": "XP_021332867", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332867", "type": "external" } ], "gene_names_uniprotkb": "sorcs1", "gene_names_refseq": "sorcs1", "protein_names_uniprotkb": "VPS10 domain-containing receptor SorCS1 isoform X1", "protein_names_refseq": "VPS10 domain-containing receptor SorCS1 isoform X1", "tax_id": 7955, "disease": "proteinuria (Disease Ontology:DOID:576)", "pathway": " (dre:100332340)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021332867.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0016020 membrane", "go_biological_process": "GO:0006892 post-Golgi vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PN08-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PN25-1", "uniprot_id": [ { "id": "A0A8M9PN25_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PN25", "type": "external" } ], "mass": 89256.0, "length": 826, "protein_name": "PHD finger protein 21A isoform X1", "gene_name": "phf21ab", "organism": "Zebrafish", "refseq_name": "PHD finger protein 21A isoform X1", "refseq_ac": [ { "id": "XP_005174337", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174337", "type": "external" } ], "gene_names_uniprotkb": "phf21ab", "gene_names_refseq": "phf21ab", "protein_names_uniprotkb": "PHD finger protein 21A isoform X1", "protein_names_refseq": "PHD finger protein 21A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:565544)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005174337.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8RUQ1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0060324 face development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PN25-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PN28-1", "uniprot_id": [ { "id": "A0A8M9PN28_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PN28", "type": "external" } ], "mass": 57281.0, "length": 512, "protein_name": "Uncharacterized protein si:dkey-195m11.11 isoform X1", "gene_name": "si:dkey-195m11.11", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-195m11.11 isoform X1", "refseq_ac": [ { "id": "XP_021332887", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332887", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-195m11.11", "gene_names_refseq": "si:dkey-195m11.11", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-195m11.11 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-195m11.11 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:794066)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PN28-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PN59-1", "uniprot_id": [ { "id": "A0A8M9PN59_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PN59", "type": "external" } ], "mass": 117437.0, "length": 1028, "protein_name": "FERM domain-containing protein 4B isoform X1", "gene_name": "frmd4ba", "organism": "Zebrafish", "refseq_name": "FERM domain-containing protein 4B isoform X1", "refseq_ac": [ { "id": "XP_021332922", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332922", "type": "external" } ], "gene_names_uniprotkb": "frmd4ba", "gene_names_refseq": "frmd4ba", "protein_names_uniprotkb": "FERM domain-containing protein 4B isoform X1", "protein_names_refseq": "FERM domain-containing protein 4B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100333566)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008092 cytoskeletal protein binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005912 adherens junction;GO:0005923 bicellular tight junction", "go_biological_process": "GO:0090162 establishment of epithelial cell polarity", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PN59-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PN76-1", "uniprot_id": [ { "id": "A0A8M9PN76_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PN76", "type": "external" } ], "mass": 27091.0, "length": 236, "protein_name": "Actin-associated protein FAM107A", "gene_name": "LOC555793", "organism": "Zebrafish", "refseq_name": "actin-associated protein FAM107A isoform X3", "refseq_ac": [ { "id": "XP_021332942", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332942", "type": "external" } ], "gene_names_uniprotkb": "LOC555793", "gene_names_refseq": "LOC555793", "protein_names_uniprotkb": "Actin-associated protein FAM107A", "protein_names_refseq": "actin-associated protein FAM107A isoform X3", "tax_id": 7955, "disease": "", "pathway": " (dre:555793)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Stress-inducible actin-binding protein that plays a role in synaptic and cognitive functions by modulating actin filamentous (F-actin) dynamics. Mediates polymerization of globular actin to F-actin. Also binds to, stabilizes and bundles F-actin. Involved in synaptic function by regulating neurite outgrowth in an actin-dependent manner and for the acquisition of hippocampus-dependent cognitive function, such as learning and long-term memory. Plays a role in the actin and microtubule cytoskeleton organization; negatively regulates focal adhesion (FA) assembly promoting malignant glial cell migration in an actin-, microtubule- and MAP1A-dependent manner. Also involved in neuroblastoma G1/S phase cell cycle progression and cell proliferation inhibition by stimulating ubiquitination of NF-kappa-B subunit RELA and NF-kappa-B degradation in a COMMD1- and actin-dependent manner. May play a role in tumor development., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005886 plasma membrane;GO:0005925 focal adhesion;GO:0045202 synapse;GO:0001725 stress fiber", "go_biological_process": "GO:0032956 regulation of actin cytoskeleton organization;GO:0051017 actin filament bundle assembly;GO:0030041 actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PN76-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PND3-1", "uniprot_id": [ { "id": "A0A8M9PND3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PND3", "type": "external" } ], "mass": 227704.0, "length": 2018, "protein_name": "NFX1-type zinc finger-containing protein 1 isoform X1", "gene_name": "znfx1", "organism": "Zebrafish", "refseq_name": "NFX1-type zinc finger-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_021333001", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333001", "type": "external" } ], "gene_names_uniprotkb": "znfx1", "gene_names_refseq": "znfx1", "protein_names_uniprotkb": "NFX1-type zinc finger-containing protein 1 isoform X1", "protein_names_refseq": "NFX1-type zinc finger-containing protein 1 isoform X1", "tax_id": 7955, "disease": "immunodeficiency 91 (Disease Ontology:DOID:0061061)", "pathway": " (dre:100536767)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JWC6", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0008270 zinc ion binding;GO:0004386 helicase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0031380 nuclear RNA-directed RNA polymerase complex", "go_biological_process": "GO:0002376 immune system process;GO:0031048 regulatory ncRNA-mediated heterochromatin formation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PND3-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNG1-1", "uniprot_id": [ { "id": "A0A8M9PNG1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNG1", "type": "external" } ], "mass": 45192.0, "length": 398, "protein_name": "DnaJ homolog subfamily A member 1", "gene_name": "dnaja", "organism": "Zebrafish", "refseq_name": "dnaJ homolog subfamily A member 1", "refseq_ac": [ { "id": "XP_002666797", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002666797", "type": "external" } ], "gene_names_uniprotkb": "dnaja", "gene_names_refseq": "dnaja", "protein_names_uniprotkb": "DnaJ homolog subfamily A member 1", "protein_names_refseq": "dnaJ homolog subfamily A member 1", "tax_id": 7955, "disease": "Alzheimer's disease (Disease Ontology:DOID:10652)", "pathway": " (dre:373115)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_002666797.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0008270 zinc ion binding;GO:0051082 unfolded protein binding;GO:0051087 protein-folding chaperone binding;GO:0001671 ATPase activator activity", "go_cellular_component": "GO:0005829 cytosol;GO:0016020 membrane", "go_biological_process": "GO:0034605 cellular response to heat;GO:0042026 protein refolding", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PNG1-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNK8-1", "uniprot_id": [ { "id": "A0A8M9PNK8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNK8", "type": "external" } ], "mass": 100275.0, "length": 889, "protein_name": "Transportin-2", "gene_name": "tnpo2b", "organism": "Zebrafish", "refseq_name": "transportin-2", "refseq_ac": [ { "id": "XP_021333077", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333077", "type": "external" } ], "gene_names_uniprotkb": "tnpo2b", "gene_names_refseq": "tnpo2b", "protein_names_uniprotkb": "Transportin-2", "protein_names_refseq": "transportin-2", "tax_id": 7955, "disease": "intellectual developmental disorder with hypotonia, impaired speech, and dysmorphic facies (Disease Ontology:DOID:0081262)", "pathway": " (dre:100005536)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding;GO:0008139 nuclear localization sequence binding;GO:0061608 nuclear import signal receptor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006606 protein import into nucleus", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PNK8-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNK9-1", "uniprot_id": [ { "id": "A0A8M9PNK9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNK9", "type": "external" } ], "mass": 54030.0, "length": 476, "protein_name": "Palmdelphin", "gene_name": "palmda", "organism": "Zebrafish", "refseq_name": "palmdelphin isoform X1", "refseq_ac": [ { "id": "XP_021322785", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322785", "type": "external" } ], "gene_names_uniprotkb": "palmda", "gene_names_refseq": "palmda", "protein_names_uniprotkb": "Palmdelphin", "protein_names_refseq": "palmdelphin isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:559824)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane;GO:0043197 dendritic spine", "go_biological_process": "GO:0008360 regulation of cell shape", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PNK9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNL4-1", "uniprot_id": [ { "id": "A0A8M9PNL4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNL4", "type": "external" } ], "mass": 34567.0, "length": 304, "protein_name": "GTP-binding protein", "gene_name": "rrad", "organism": "Zebrafish", "refseq_name": "GTP-binding protein RAD isoform X1", "refseq_ac": [ { "id": "XP_021333082", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333082", "type": "external" } ], "gene_names_uniprotkb": "rrad; fi06a10; wu:fi06a10; zgc:63471", "gene_names_refseq": "fi06a10; rrad; wu:fi06a10; zgc:63471", "protein_names_uniprotkb": "GTP-binding protein", "protein_names_refseq": "GTP-binding protein RAD isoform X1", "tax_id": 7955, "disease": "congestive heart failure (Disease Ontology:DOID:6000); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005516 calmodulin binding;GO:0005525 GTP binding;GO:0005246 calcium channel regulator activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PNL4-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNM1-1", "uniprot_id": [ { "id": "A0A8M9PNM1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNM1", "type": "external" } ], "mass": 44101.0, "length": 395, "protein_name": "C-C chemokine receptor type 5 isoform X1", "gene_name": "ccr8.1", "organism": "Zebrafish", "refseq_name": "C-C chemokine receptor type 5 isoform X1", "refseq_ac": [ { "id": "XP_073781957", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073781957", "type": "external" } ], "gene_names_uniprotkb": "ccr8.1", "gene_names_refseq": "ccr8.1", "protein_names_uniprotkb": "C-C chemokine receptor type 5 isoform X1", "protein_names_refseq": "C-C chemokine receptor type 5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:792495)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HJ34", "ec_number_list": [], "go_molecular_function": "GO:0004950 chemokine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006935 chemotaxis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PNM1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNN9-1", "uniprot_id": [ { "id": "A0A8M9PNN9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNN9", "type": "external" } ], "mass": 123117.0, "length": 1113, "protein_name": "WD repeat and HMG-box DNA-binding protein 1", "gene_name": "wdhd1", "organism": "Zebrafish", "refseq_name": "WD repeat and HMG-box DNA-binding protein 1 isoform X1", "refseq_ac": [ { "id": "XP_009291161", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291161", "type": "external" } ], "gene_names_uniprotkb": "wdhd1; AND-1; wu:fa11f10; wu:fb77d12; zgc:92585", "gene_names_refseq": "AND-1; wdhd1; wu:fa11f10; wu:fb77d12; zgc:92585", "protein_names_uniprotkb": "WD repeat and HMG-box DNA-binding protein 1; Acidic nucleoplasmic DNA-binding protein 1", "protein_names_refseq": "WD repeat and HMG-box DNA-binding protein 1 isoform X1", "tax_id": 7955, "disease": "cholangiocarcinoma (Disease Ontology:DOID:4947)", "pathway": " (dre:436999)", "pathway_count": 1, "publication_count": 5, "publication_id_list": "11116086;17498288;22412924;26469318;38850245", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Core replisome component that acts as a replication initiation factor. Binds directly to the CMG complex and functions as a hub to recruit additional proteins to the replication fork., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding", "go_cellular_component": "GO:0043596 nuclear replication fork;GO:0005654 nucleoplasm", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0006281 DNA repair;GO:0006261 DNA-templated DNA replication", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A0A8M9PNN9-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNP7-1", "uniprot_id": [ { "id": "A0A8M9PNP7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNP7", "type": "external" } ], "mass": 35600.0, "length": 315, "protein_name": "Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1", "gene_name": "hnrnpcb; zgc:55733", "organism": "Zebrafish", "refseq_name": "heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1", "refseq_ac": [ { "id": "XP_021333117", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333117", "type": "external" } ], "gene_names_uniprotkb": "hnrnpcb; zgc:55733; Hnrpc; zgc:55733", "gene_names_refseq": "Hnrpc; zgc:55733", "protein_names_uniprotkb": "Heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1", "protein_names_refseq": "heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1", "tax_id": 7955, "disease": "autosomal dominant intellectual developmental disorder 74 (Disease Ontology:DOID:0061047); atherosclerosis (Disease Ontology:DOID:1936); cervical cancer (Disease Ontology:DOID:4362)", "pathway": " (dre:393968)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Binds pre-mRNA and nucleates the assembly of 40S hnRNP particles. Interacts with poly-U tracts in the 3'-UTR or 5'-UTR of mRNA and modulates the stability and the level of translation of bound mRNA molecules. Single HNRNPC tetramers bind 230-240 nucleotides. Trimers of HNRNPC tetramers bind 700 nucleotides. May play a role in the early steps of spliceosome assembly and pre-mRNA splicing. N6-methyladenosine (m6A) has been shown to alter the local structure in mRNAs and long non-coding RNAs (lncRNAs) via a mechanism named 'm(6)A-switch', facilitating binding of HNRNPC, leading to regulation of mRNA splicing., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:1990904 ribonucleoprotein complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PNP7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNQ3-1", "uniprot_id": [ { "id": "A0A8M9PNQ3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNQ3", "type": "external" } ], "mass": 124104.0, "length": 1116, "protein_name": "Reticulon", "gene_name": "rtn3", "organism": "Zebrafish", "refseq_name": "reticulon-3 isoform X1", "refseq_ac": [ { "id": "XP_021333122", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333122", "type": "external" } ], "gene_names_uniprotkb": "rtn3; wu:fd60d11; zgc:56439; zgc:77630", "gene_names_refseq": "rtn3; wu:fd60d11; zgc:56439; zgc:77630", "protein_names_uniprotkb": "Reticulon", "protein_names_refseq": "reticulon-3 isoform X1", "tax_id": 7955, "disease": "hereditary spastic paraplegia 12 (Disease Ontology:DOID:0110765); hereditary spastic paraplegia (Disease Ontology:DOID:2476); chronic kidney disease (Disease Ontology:DOID:784)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021333122.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0014069 postsynaptic density;GO:0005789 endoplasmic reticulum membrane;GO:0043005 neuron projection", "go_biological_process": "GO:0007420 brain development;GO:0030182 neuron differentiation;GO:0071787 endoplasmic reticulum tubular network formation;GO:1990809 endoplasmic reticulum tubular network membrane organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PNQ3-1", "record_type": "protein", "filter_code": "0000000.0000010.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNV8-1", "uniprot_id": [ { "id": "A0A8M9PNV8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNV8", "type": "external" } ], "mass": 62445.0, "length": 555, "protein_name": "histone deacetylase", "gene_name": "LOC100332699", "organism": "Zebrafish", "refseq_name": "histone deacetylase 9-B isoform X1", "refseq_ac": [ { "id": "XP_021323916", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323916", "type": "external" } ], "gene_names_uniprotkb": "LOC100332699", "gene_names_refseq": "LOC100332699", "protein_names_uniprotkb": "histone deacetylase; 3.5.1.98", "protein_names_refseq": "histone deacetylase 9-B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100332699)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.5.1.98", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.98", "type": "external" }, { "id": "3.5.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.-", "type": "external" } ], "go_molecular_function": "GO:0141221 histone deacetylase activity, hydrolytic mechanism", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PNV8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PS85-1", "uniprot_id": [ { "id": "A0A8M9PS85_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PS85", "type": "external" } ], "mass": 345727.0, "length": 3001, "protein_name": "Piezo-type mechanosensitive ion channel component 2 isoform X1", "gene_name": "piezo2b", "organism": "Zebrafish", "refseq_name": "piezo-type mechanosensitive ion channel component 2 isoform X1", "refseq_ac": [ { "id": "XP_021323945", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323945", "type": "external" } ], "gene_names_uniprotkb": "piezo2b", "gene_names_refseq": "piezo2b", "protein_names_uniprotkb": "Piezo-type mechanosensitive ion channel component 2 isoform X1", "protein_names_refseq": "piezo-type mechanosensitive ion channel component 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100534973)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021323945.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008381 mechanosensitive monoatomic ion channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005634 nucleus", "go_biological_process": "GO:0009652 thigmotropism;GO:0050982 detection of mechanical stimulus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PS85-1", "record_type": "protein", "filter_code": "0000000.0000001.001000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNY6-1", "uniprot_id": [ { "id": "A0A8M9PNY6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNY6", "type": "external" } ], "mass": 48138.0, "length": 423, "protein_name": "Suppressor of cytokine signaling 4 isoform X1", "gene_name": "socs4", "organism": "Zebrafish", "refseq_name": "suppressor of cytokine signaling 4 isoform X1", "refseq_ac": [ { "id": "XP_021322920", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021322920", "type": "external" } ], "gene_names_uniprotkb": "socs4; socs4a", "gene_names_refseq": "socs4a; socs4", "protein_names_uniprotkb": "Suppressor of cytokine signaling 4 isoform X1", "protein_names_refseq": "suppressor of cytokine signaling 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HNX7;A0AC58HNY3;A0AC58HP27", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0016567 protein ubiquitination;GO:0009968 negative regulation of signal transduction;GO:0019221 cytokine-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PNY6-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PNZ8-1", "uniprot_id": [ { "id": "A0A8M9PNZ8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PNZ8", "type": "external" } ], "mass": 131199.0, "length": 1178, "protein_name": "Poly [ADP-ribose] polymerase", "gene_name": "parp10", "organism": "Zebrafish", "refseq_name": "protein mono-ADP-ribosyltransferase PARP10", "refseq_ac": [ { "id": "XP_021323967", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323967", "type": "external" } ], "gene_names_uniprotkb": "parp10", "gene_names_refseq": "parp10", "protein_names_uniprotkb": "Poly [ADP-ribose] polymerase; 2.4.2.-; PARP", "protein_names_refseq": "protein mono-ADP-ribosyltransferase PARP10", "tax_id": 7955, "disease": "", "pathway": " (dre:564886)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58I083", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003714 transcription corepressor activity;GO:0003950 NAD+ poly-ADP-ribosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0010629 negative regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PNZ8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PP30-1", "uniprot_id": [ { "id": "A0A8M9PP30_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PP30", "type": "external" } ], "mass": 56905.0, "length": 504, "protein_name": "Cytochrome P450 2K1-like", "gene_name": "cyp2k20", "organism": "Zebrafish", "refseq_name": "cytochrome P450 2K1-like", "refseq_ac": [ { "id": "XP_021328803", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328803", "type": "external" } ], "gene_names_uniprotkb": "cyp2k20", "gene_names_refseq": "cyp2k20", "protein_names_uniprotkb": "Cytochrome P450 2K1-like", "protein_names_refseq": "cytochrome P450 2K1-like", "tax_id": 7955, "disease": "", "pathway": " (dre:562371)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006805 xenobiotic metabolic process;GO:0006082 organic acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PP30-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PPG4-1", "uniprot_id": [ { "id": "A0A8M9PPG4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PPG4", "type": "external" } ], "mass": 26863.0, "length": 239, "protein_name": "Fibroblast growth factor-binding protein 1", "gene_name": "fgfbp3", "organism": "Zebrafish", "refseq_name": "fibroblast growth factor-binding protein 1", "refseq_ac": [ { "id": "XP_021323080", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323080", "type": "external" } ], "gene_names_uniprotkb": "fgfbp3", "gene_names_refseq": "fgfbp3", "protein_names_uniprotkb": "Fibroblast growth factor-binding protein 1", "protein_names_refseq": "fibroblast growth factor-binding protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:497419); (R-DRE-190377)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021323080.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "X1WDQ7", "ec_number_list": [], "go_molecular_function": "GO:0019838 growth factor binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0007267 cell-cell signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PPG4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PPW1-1", "uniprot_id": [ { "id": "A0A8M9PPW1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PPW1", "type": "external" } ], "mass": 123669.0, "length": 1124, "protein_name": "RING-type E3 ubiquitin transferase", "gene_name": "si:busm1-163l24.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:busm1-163l24.3", "refseq_ac": [ { "id": "XP_021329068", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329068", "type": "external" } ], "gene_names_uniprotkb": "si:busm1-163l24.3", "gene_names_refseq": "si:busm1-163l24.3", "protein_names_uniprotkb": "RING-type E3 ubiquitin transferase; 2.3.2.27", "protein_names_refseq": "uncharacterized protein si:busm1-163l24.3", "tax_id": 7955, "disease": "", "pathway": " (dre:368753)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J1M4;A0AC58J1M6;A0AC58J1M8;A0AC58J1N2;A0AC58J1Q5", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0046872 metal ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005654 nucleoplasm", "go_biological_process": "GO:0007219 Notch signaling pathway;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PPW1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PPX2-1", "uniprot_id": [ { "id": "A0A8M9PPX2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PPX2", "type": "external" } ], "mass": 31841.0, "length": 283, "protein_name": "Neurexophilin", "gene_name": "nxph3", "organism": "Zebrafish", "refseq_name": "neurexophilin-1", "refseq_ac": [ { "id": "XP_691473", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_691473", "type": "external" } ], "gene_names_uniprotkb": "nxph3; LOC563017", "gene_names_refseq": "LOC563017", "protein_names_uniprotkb": "Neurexophilin", "protein_names_refseq": "neurexophilin-1", "tax_id": 7955, "disease": "", "pathway": " (dre:563017)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 15, 2007 this sequence version replaced XP_691473.1. COMPLETENESS: full length., [RefSeq]; May be signaling molecules that resemble neuropeptides., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PPX2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PPY9-1", "uniprot_id": [ { "id": "A0A8M9PPY9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PPY9", "type": "external" } ], "mass": 151089.0, "length": 1355, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "mast3a", "organism": "Zebrafish", "refseq_name": "microtubule-associated serine/threonine-protein kinase 3 isoform X1", "refseq_ac": [ { "id": "XP_021326924", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326924", "type": "external" } ], "gene_names_uniprotkb": "mast3a", "gene_names_refseq": "mast3a", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "microtubule-associated serine/threonine-protein kinase 3 isoform X1", "tax_id": 7955, "disease": "developmental and epileptic encephalopathy 108 (Disease Ontology:DOID:0070394)", "pathway": " (dre:100534685)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021326924.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0000287 magnesium ion binding;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0015630 microtubule cytoskeleton", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:1904693 midbrain morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PPY9-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PQ45-1", "uniprot_id": [ { "id": "A0A8M9PQ45_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PQ45", "type": "external" } ], "mass": 217325.0, "length": 1913, "protein_name": "ribonuclease H", "gene_name": "LOC110438198", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_021324376", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324376", "type": "external" } ], "gene_names_uniprotkb": "LOC110438198", "gene_names_refseq": "LOC110438198", "protein_names_uniprotkb": "ribonuclease H; 3.1.26.4", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:110438198)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003676 nucleic acid binding;GO:0004523 RNA-DNA hybrid ribonuclease activity", "go_cellular_component": "", "go_biological_process": "GO:0015074 DNA integration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PQ45-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PQ90-1", "uniprot_id": [ { "id": "A0A8M9PQ90_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PQ90", "type": "external" } ], "mass": 145120.0, "length": 1292, "protein_name": "F-actin monooxygenase", "gene_name": "mical2a", "organism": "Zebrafish", "refseq_name": "F-actin-monooxygenase mical2b-like isoform X1", "refseq_ac": [ { "id": "XP_021333692", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333692", "type": "external" } ], "gene_names_uniprotkb": "mical2a", "gene_names_refseq": "mical2a", "protein_names_uniprotkb": "F-actin monooxygenase; 1.14.13.225", "protein_names_refseq": "F-actin-monooxygenase mical2b-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:569607)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.14.13.225", "url": "https://www.rhea-db.org/rhea/?query=ec:1.14.13.225", "type": "external" }, { "id": "1.6.3.1", "url": "https://www.rhea-db.org/rhea/?query=ec:1.6.3.1", "type": "external" } ], "go_molecular_function": "GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0003779 actin binding;GO:0046872 metal ion binding;GO:0071949 FAD binding;GO:0120501 F-actin monooxygenase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0030036 actin cytoskeleton organization;GO:0030042 actin filament depolymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PQ90-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PQC1-1", "uniprot_id": [ { "id": "A0A8M9PQC1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PQC1", "type": "external" } ], "mass": 31175.0, "length": 274, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr100", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-3", "refseq_ac": [ { "id": "XP_021325294", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325294", "type": "external" } ], "gene_names_uniprotkb": "pimr100", "gene_names_refseq": "pimr100", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-3", "tax_id": 7955, "disease": "", "pathway": " (dre:100034450)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021325294.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PQC1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PQC7-1", "uniprot_id": [ { "id": "A0A8M9PQC7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PQC7", "type": "external" } ], "mass": 209745.0, "length": 1812, "protein_name": "Interferon-induced very large GTPase 1 isoform X1", "gene_name": "zmp:0000000845", "organism": "Zebrafish", "refseq_name": "interferon-induced very large GTPase 1 isoform X1", "refseq_ac": [ { "id": "XP_021329208", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329208", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000000845", "gene_names_refseq": "zmp:0000000845", "protein_names_uniprotkb": "Interferon-induced very large GTPase 1 isoform X1", "protein_names_refseq": "interferon-induced very large GTPase 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882351)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021329208.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PQC7-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PQG8-1", "uniprot_id": [ { "id": "A0A8M9PQG8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PQG8", "type": "external" } ], "mass": 92888.0, "length": 848, "protein_name": "Alpha-adducin", "gene_name": "add1", "organism": "Zebrafish", "refseq_name": "alpha-adducin isoform X1", "refseq_ac": [ { "id": "XP_021324516", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324516", "type": "external" } ], "gene_names_uniprotkb": "add1; bZ1H20.1; cb787; zgc:158352", "gene_names_refseq": "add1; bZ1H20.1; cb787; zgc:158352", "protein_names_uniprotkb": "Alpha-adducin; Erythrocyte adducin subunit alpha", "protein_names_refseq": "alpha-adducin isoform X1", "tax_id": 7955, "disease": "spastic quadriplegic cerebral palsy 3 (Disease Ontology:DOID:0081361); pre-eclampsia (Disease Ontology:DOID:10591); hypertension (Disease Ontology:DOID:10763); essential hypertension (Disease Ontology:DOID:10825); hydrocephalus (Disease Ontology:DOID:10908); gastroschisis (Disease Ontology:DOID:11044); familial combined hyperlipidemia (Disease Ontology:DOID:13809); atherosclerosis (Disease Ontology:DOID:1936); cerebral palsy (Disease Ontology:DOID:1969); IgA glomerulonephritis (Disease Ontology:DOID:2986); temporal lobe epilepsy (Disease Ontology:DOID:3328); myocardial infarction (Disease Ontology:DOID:5844)", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Membrane-cytoskeleton-associated protein that promotes the assembly of the spectrin-actin network. Binds to calmodulin., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 12, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0051015 actin filament binding;GO:0003779 actin binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005886 plasma membrane;GO:0005912 adherens junction;GO:0014069 postsynaptic density;GO:0030054 cell junction", "go_biological_process": "GO:0051016 barbed-end actin filament capping;GO:1903142 positive regulation of establishment of endothelial barrier;GO:1903393 positive regulation of adherens junction organization;GO:0007010 cytoskeleton organization;GO:0032535 regulation of cellular component size", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PQG8-1", "record_type": "protein", "filter_code": "0000000.0000110.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PQN7-1", "uniprot_id": [ { "id": "A0A8M9PQN7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PQN7", "type": "external" } ], "mass": 94111.0, "length": 837, "protein_name": "dolichyl-phosphate-mannose--protein mannosyltransferase", "gene_name": "tmtc2b", "organism": "Zebrafish", "refseq_name": "protein O-mannosyl-transferase TMTC2 isoform X1", "refseq_ac": [ { "id": "XP_021323440", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323440", "type": "external" } ], "gene_names_uniprotkb": "tmtc2b", "gene_names_refseq": "tmtc2b", "protein_names_uniprotkb": "dolichyl-phosphate-mannose--protein mannosyltransferase; 2.4.1.109", "protein_names_refseq": "protein O-mannosyl-transferase TMTC2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555381)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021323440.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004169 dolichyl-phosphate-mannose-protein mannosyltransferase activity;GO:0000030 mannosyltransferase activity", "go_cellular_component": "GO:0005789 endoplasmic reticulum membrane;GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0035269 protein O-linked glycosylation via mannose", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PQN7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PQP1-1", "uniprot_id": [ { "id": "A0A8M9PQP1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PQP1", "type": "external" } ], "mass": 33065.0, "length": 290, "protein_name": "tRNA-uridine aminocarboxypropyltransferase", "gene_name": "dtwd2", "organism": "Zebrafish", "refseq_name": "tRNA-uridine aminocarboxypropyltransferase 2", "refseq_ac": [ { "id": "XP_021324611", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324611", "type": "external" } ], "gene_names_uniprotkb": "dtwd2", "gene_names_refseq": "dtwd2", "protein_names_uniprotkb": "tRNA-uridine aminocarboxypropyltransferase; 2.5.1.25", "protein_names_refseq": "tRNA-uridine aminocarboxypropyltransferase 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100537837)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.5.1.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.5.1.25", "type": "external" } ], "go_molecular_function": "GO:0016432 tRNA-uridine aminocarboxypropyltransferase activity", "go_cellular_component": "", "go_biological_process": "GO:0008033 tRNA processing;GO:0061053 somite development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PQP1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PQS2-1", "uniprot_id": [ { "id": "A0A8M9PQS2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PQS2", "type": "external" } ], "mass": 36497.0, "length": 312, "protein_name": "Sulfotransferase", "gene_name": "sult1st4", "organism": "Zebrafish", "refseq_name": "sulfotransferase family 1, cytosolic sulfotransferase 4 isoform X1", "refseq_ac": [ { "id": "XP_021333897", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333897", "type": "external" } ], "gene_names_uniprotkb": "sult1st4; zgc:76922", "gene_names_refseq": "sult1st4; zgc:76922", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "sulfotransferase family 1, cytosolic sulfotransferase 4 isoform X1", "tax_id": 7955, "disease": "benign neoplasm (Disease Ontology:DOID:0060072); prostate cancer (Disease Ontology:DOID:10283); stomach cancer (Disease Ontology:DOID:10534); urinary bladder cancer (Disease Ontology:DOID:11054); lung cancer (Disease Ontology:DOID:1324); endometrial cancer (Disease Ontology:DOID:1380); breast cancer (Disease Ontology:DOID:1612); esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); lung squamous cell carcinoma (Disease Ontology:DOID:3907); lung adenocarcinoma (Disease Ontology:DOID:3910)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 10, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004062 aryl sulfotransferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0051923 sulfation;GO:0006805 xenobiotic metabolic process;GO:0006584 catecholamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PQS2-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PR11-1", "uniprot_id": [ { "id": "A0A8M9PR11_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PR11", "type": "external" } ], "mass": 38863.0, "length": 365, "protein_name": "Nuclear transcription factor Y subunit", "gene_name": "nfyal", "organism": "Zebrafish", "refseq_name": "nuclear transcription factor Y, alpha, like isoform X1", "refseq_ac": [ { "id": "XP_021333982", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333982", "type": "external" } ], "gene_names_uniprotkb": "nfyal; wu:fd20d03; zgc:92567", "gene_names_refseq": "nfyal; wu:fd20d03; zgc:92567", "protein_names_uniprotkb": "Nuclear transcription factor Y subunit", "protein_names_refseq": "nuclear transcription factor Y, alpha, like isoform X1", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Component of the sequence-specific heterotrimeric transcription factor (NF-Y) which specifically recognizes a 5'-CCAAT-3' box motif found in the promoters of its target genes., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "GO:0016602 CCAAT-binding factor complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PR11-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PR57-1", "uniprot_id": [ { "id": "A0A8M9PR57_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PR57", "type": "external" } ], "mass": 74157.0, "length": 659, "protein_name": "Nicotinamide phosphoribosyltransferase", "gene_name": "nampt3.2", "organism": "Zebrafish", "refseq_name": "nicotinamide phosphoribosyltransferase", "refseq_ac": [ { "id": "XP_021323615", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323615", "type": "external" } ], "gene_names_uniprotkb": "nampt3.2", "gene_names_refseq": "nampt3.2", "protein_names_uniprotkb": "Nicotinamide phosphoribosyltransferase; 2.4.2.12", "protein_names_refseq": "nicotinamide phosphoribosyltransferase", "tax_id": 7955, "disease": "transient cerebral ischemia (Disease Ontology:DOID:224); coronary artery disease (Disease Ontology:DOID:3393); carotid artery disease (Disease Ontology:DOID:3407); pulmonary hypertension (Disease Ontology:DOID:6432); psoriasis (Disease Ontology:DOID:8893); type 2 diabetes mellitus (Disease Ontology:DOID:9352); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:100148280)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021323615.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.4.2.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.2.12", "type": "external" } ], "go_molecular_function": "GO:0047280 nicotinamide phosphoribosyltransferase activity", "go_cellular_component": "", "go_biological_process": "GO:0009435 NAD+ biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PR57-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PR69-1", "uniprot_id": [ { "id": "A0A8M9PR69_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PR69", "type": "external" } ], "mass": 186972.0, "length": 1631, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "citb", "organism": "Zebrafish", "refseq_name": "citron Rho-interacting kinase isoform X1", "refseq_ac": [ { "id": "XP_021334036", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334036", "type": "external" } ], "gene_names_uniprotkb": "citb", "gene_names_refseq": "citb", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "citron Rho-interacting kinase isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100333880)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0046872 metal ion binding;GO:0016301 kinase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PR69-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PR86-1", "uniprot_id": [ { "id": "A0A8M9PR86_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PR86", "type": "external" } ], "mass": 66712.0, "length": 597, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC100001608", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_021334052", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334052", "type": "external" } ], "gene_names_uniprotkb": "LOC100001608", "gene_names_refseq": "LOC100001608", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:100001608)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021334052.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PR86-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PR98-1", "uniprot_id": [ { "id": "A0A8M9PR98_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PR98", "type": "external" } ], "mass": 35907.0, "length": 317, "protein_name": "Metaxin", "gene_name": "mtx1b", "organism": "Zebrafish", "refseq_name": "metaxin-1b isoform X1", "refseq_ac": [ { "id": "XP_021323655", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323655", "type": "external" } ], "gene_names_uniprotkb": "mtx1b; mtx1; zgc:101675", "gene_names_refseq": "mtx1b; mtx1; zgc:101675", "protein_names_uniprotkb": "Metaxin", "protein_names_refseq": "metaxin-1b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:286740)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Involved in transport of proteins into the mitochondrion. Essential for embryonic development., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0001401 SAM complex", "go_biological_process": "GO:0015031 protein transport;GO:0007005 mitochondrion organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PR98-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PRG4-1", "uniprot_id": [ { "id": "A0A8M9PRG4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PRG4", "type": "external" } ], "mass": 72514.0, "length": 645, "protein_name": "Leiomodin-3", "gene_name": "lmod1a", "organism": "Zebrafish", "refseq_name": "leiomodin 1a (smooth muscle)", "refseq_ac": [ { "id": "NP_001410201", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001410201", "type": "external" } ], "gene_names_uniprotkb": "lmod1a; lmod1; si:dkey-193l3.5", "gene_names_refseq": "lmod1a; lmod1; si:dkey-193l3.5", "protein_names_uniprotkb": "Leiomodin-3", "protein_names_refseq": "leiomodin 1 (smooth muscle); leiomodin 1a (smooth muscle); leiomodin-1-like", "tax_id": 7955, "disease": "megacystis-microcolon-intestinal hypoperistalsis syndrome (Disease Ontology:DOID:0060610)", "pathway": " (dre:101887017)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;39143337", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588733.388080.1, SRR32588723.2596052.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476773 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F1Q5S5", "ec_number_list": [], "go_molecular_function": "GO:0005523 tropomyosin binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005865 striated muscle thin filament;GO:0031430 M band;GO:0030016 myofibril", "go_biological_process": "GO:0006936 muscle contraction;GO:0007015 actin filament organization;GO:0051694 pointed-end actin filament capping;GO:0030239 myofibril assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M9PRG4-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PRR3-1", "uniprot_id": [ { "id": "A0A8M9PRR3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PRR3", "type": "external" } ], "mass": 30968.0, "length": 283, "protein_name": "pancreatic elastase", "gene_name": "cela1.3", "organism": "Zebrafish", "refseq_name": "chymotrypsin-like elastase family member 1.3 isoform X1", "refseq_ac": [ { "id": "XP_021324991", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324991", "type": "external" } ], "gene_names_uniprotkb": "cela1.3; fb62f03; im:7042915; wu:fb62f03; zgc:103609; zgc:92745", "gene_names_refseq": "cela1.3; fb62f03; im:7042915; wu:fb62f03; zgc:103609; zgc:92745", "protein_names_uniprotkb": "pancreatic elastase; 3.4.21.36", "protein_names_refseq": "chymotrypsin-like elastase family member 1.3 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PRR3-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PRR4-1", "uniprot_id": [ { "id": "A0A8M9PRR4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PRR4", "type": "external" } ], "mass": 25589.0, "length": 234, "protein_name": "Tumor necrosis factor receptor superfamily member 14-like", "gene_name": "LOC798191", "organism": "Zebrafish", "refseq_name": "tumor necrosis factor receptor superfamily member 14-like", "refseq_ac": [ { "id": "XP_073766450", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073766450", "type": "external" } ], "gene_names_uniprotkb": "LOC798191", "gene_names_refseq": "LOC798191", "protein_names_uniprotkb": "Tumor necrosis factor receptor superfamily member 14-like", "protein_names_refseq": "tumor necrosis factor receptor superfamily member 14-like", "tax_id": 7955, "disease": "", "pathway": " (dre:798191)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G9N1;A0AC58G9N8;A0AC58G9P3", "ec_number_list": [], "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007165 signal transduction;GO:0050829 defense response to Gram-negative bacterium;GO:0050830 defense response to Gram-positive bacterium;GO:2000406 positive regulation of T cell migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PRR4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PRW0-1", "uniprot_id": [ { "id": "A0A8M9PRW0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PRW0", "type": "external" } ], "mass": 326008.0, "length": 2764, "protein_name": "Interferon-induced very large GTPase 1", "gene_name": "LOC562960", "organism": "Zebrafish", "refseq_name": "interferon-induced very large GTPase 1", "refseq_ac": [ { "id": "XP_021327619", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327619", "type": "external" } ], "gene_names_uniprotkb": "LOC562960", "gene_names_refseq": "LOC562960", "protein_names_uniprotkb": "Interferon-induced very large GTPase 1", "protein_names_refseq": "interferon-induced very large GTPase 1", "tax_id": 7955, "disease": "", "pathway": " (dre:562960)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021327619.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PRW0-1", "record_type": "protein", "filter_code": "0000000.0000001.001000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PS18-1", "uniprot_id": [ { "id": "A0A8M9PS18_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PS18", "type": "external" } ], "mass": 115624.0, "length": 1047, "protein_name": "EMILIN-3", "gene_name": "emilin3a", "organism": "Zebrafish", "refseq_name": "EMILIN-3", "refseq_ac": [ { "id": "XP_021329823", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329823", "type": "external" } ], "gene_names_uniprotkb": "emilin3a", "gene_names_refseq": "emilin3a", "protein_names_uniprotkb": "EMILIN-3", "protein_names_refseq": "EMILIN-3", "tax_id": 7955, "disease": "", "pathway": " (dre:570521)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021329823.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0048570 notochord morphogenesis;GO:0008589 regulation of smoothened signaling pathway;GO:0055001 muscle cell development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PS18-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PS28-1", "uniprot_id": [ { "id": "A0A8M9PS28_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PS28", "type": "external" } ], "mass": 47833.0, "length": 418, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC100006975", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-2", "refseq_ac": [ { "id": "XP_021323890", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323890", "type": "external" } ], "gene_names_uniprotkb": "LOC100006975", "gene_names_refseq": "LOC100006975", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-2", "tax_id": 7955, "disease": "", "pathway": " (dre:100006975)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021323890.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PS28-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PSC1-1", "uniprot_id": [ { "id": "A0A8M9PSC1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PSC1", "type": "external" } ], "mass": 242994.0, "length": 2261, "protein_name": "AT-rich interactive domain-containing protein 1A", "gene_name": "arid1ab", "organism": "Zebrafish", "refseq_name": "AT-rich interactive domain-containing protein 1A", "refseq_ac": [ { "id": "XP_021323975", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021323975", "type": "external" } ], "gene_names_uniprotkb": "arid1ab", "gene_names_refseq": "arid1ab", "protein_names_uniprotkb": "AT-rich interactive domain-containing protein 1A", "protein_names_refseq": "AT-rich interactive domain-containing protein 1A", "tax_id": 7955, "disease": "ovarian clear cell carcinoma (Disease Ontology:DOID:0050934); Coffin-Siris syndrome 1 (Disease Ontology:DOID:0070042); Coffin-Siris syndrome 2 (Disease Ontology:DOID:0070044); stomach cancer (Disease Ontology:DOID:10534); pre-eclampsia (Disease Ontology:DOID:10591); alcohol use disorder (Disease Ontology:DOID:1574); breast cancer (Disease Ontology:DOID:1612); cancer (Disease Ontology:DOID:162); Coffin-Siris syndrome (Disease Ontology:DOID:1925); colon cancer (Disease Ontology:DOID:219); endometrial adenocarcinoma (Disease Ontology:DOID:2870); gastric adenocarcinoma (Disease Ontology:DOID:3717); lung non-small cell carcinoma (Disease Ontology:DOID:3908); esophagus adenocarcinoma (Disease Ontology:DOID:4914); Klatskin's tumor (Disease Ontology:DOID:4927); intrahepatic cholangiocarcinoma (Disease Ontology:DOID:4928); hepatocellular carcinoma (Disease Ontology:DOID:684); neuroblastoma (Disease Ontology:DOID:769); colorectal cancer (Disease Ontology:DOID:9256); nasopharynx carcinoma (Disease Ontology:DOID:9261)", "pathway": " (dre:568161)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 20, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0016514 SWI/SNF complex;GO:0071565 nBAF complex;GO:0035060 brahma complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0007399 nervous system development;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PSC1-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PSE6-1", "uniprot_id": [ { "id": "A0A8M9PSE6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PSE6", "type": "external" } ], "mass": 83983.0, "length": 760, "protein_name": "Disintegrin and metalloproteinase domain-containing protein 23", "gene_name": "adam23b", "organism": "Zebrafish", "refseq_name": "disintegrin and metalloproteinase domain-containing protein 23", "refseq_ac": [ { "id": "XP_021334457", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334457", "type": "external" } ], "gene_names_uniprotkb": "adam23b", "gene_names_refseq": "adam23b", "protein_names_uniprotkb": "Disintegrin and metalloproteinase domain-containing protein 23", "protein_names_refseq": "disintegrin and metalloproteinase domain-containing protein 23", "tax_id": 7955, "disease": "", "pathway": " (dre:101884782)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GFG8;A0AC58GFH9", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008237 metallopeptidase activity", "go_cellular_component": "GO:0012505 endomembrane system;GO:0042734 presynaptic membrane", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PSE6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PSI8-1", "uniprot_id": [ { "id": "A0A8M9PSI8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PSI8", "type": "external" } ], "mass": 55163.0, "length": 491, "protein_name": "Activin receptor type-1C", "gene_name": "acvr1c", "organism": "Zebrafish", "refseq_name": "activin receptor type-1C isoform X1", "refseq_ac": [ { "id": "XP_021334502", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334502", "type": "external" } ], "gene_names_uniprotkb": "acvr1c", "gene_names_refseq": "acvr1c", "protein_names_uniprotkb": "Activin receptor type-1C; 2.7.11.30; Activin receptor type IC; Activin receptor-like kinase 7", "protein_names_refseq": "activin receptor type-1C isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100331105)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Serine/threonine protein kinase which forms a receptor complex on ligand binding. The receptor complex consists of 2 type II and 2 type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators, SMAD2 and SMAD3. Receptor for activin AB, activin B, activin E and NODAL. Upon NODAL binding, activation results in increased apoptosis and reduced proliferation through suppression of AKT signaling and the activation of Smad2-dependent signaling pathway in pancreatic beta-cells, trophoblasts, epithelial or neuronal cells. Acts as a positive regulator for macrophage activation partially through down-regulation of PPARG expression., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.30", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.30", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0016361 activin receptor activity, type I", "go_cellular_component": "GO:0005886 plasma membrane;GO:0048179 activin receptor complex", "go_biological_process": "GO:0007399 nervous system development;GO:0006915 apoptotic process;GO:0071363 cellular response to growth factor stimulus;GO:0032924 activin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PSI8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PST9-1", "uniprot_id": [ { "id": "A0A8M9PST9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PST9", "type": "external" } ], "mass": 80644.0, "length": 739, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC110438304", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_021325381", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325381", "type": "external" } ], "gene_names_uniprotkb": "LOC110438304", "gene_names_refseq": "LOC110438304", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:110438304)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021325381.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PST9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PSV5-1", "uniprot_id": [ { "id": "A0A8M9PSV5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PSV5", "type": "external" } ], "mass": 105240.0, "length": 939, "protein_name": "GPI inositol-deacylase", "gene_name": "pgap1", "organism": "Zebrafish", "refseq_name": "GPI inositol-deacylase", "refseq_ac": [ { "id": "XP_021334622", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334622", "type": "external" } ], "gene_names_uniprotkb": "pgap1", "gene_names_refseq": "pgap1", "protein_names_uniprotkb": "GPI inositol-deacylase; 3.1.-.-", "protein_names_refseq": "GPI inositol-deacylase", "tax_id": 7955, "disease": "holoprosencephaly (Disease Ontology:DOID:4621)", "pathway": " (dre:100147850)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021334622.1. COMPLETENESS: full length., [RefSeq]; GPI inositol-deacylase that catalyzes the remove of the acyl chain linked to the 2-OH position of inositol ring from the GPI-anchored protein (GPI-AP) in the endoplasmic reticulum. Initiates the post-attachment remodeling phase of GPI-AP biogenesis and participates in endoplasmic reticulum (ER)-to-Golgi transport of GPI-anchored protein., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F1R8J0", "ec_number_list": [ { "id": "3.1.-.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.-.-", "type": "external" } ], "go_molecular_function": "GO:0016788 hydrolase activity, acting on ester bonds;GO:0160215 deacylase activity", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "GO:0015031 protein transport;GO:0006506 GPI anchor biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PSV5-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PSZ5-1", "uniprot_id": [ { "id": "A0A8M9PSZ5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PSZ5", "type": "external" } ], "mass": 55420.0, "length": 486, "protein_name": "Calcium/calmodulin-dependent protein kinase IGb isoform X1", "gene_name": "camk1gb", "organism": "Zebrafish", "refseq_name": "calcium/calmodulin-dependent protein kinase IGb isoform X1", "refseq_ac": [ { "id": "XP_021325441", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325441", "type": "external" } ], "gene_names_uniprotkb": "camk1gb; fk61c03; wu:fk61c03; zgc:73155", "gene_names_refseq": "camk1gb; fk61c03; wu:fk61c03; zgc:73155", "protein_names_uniprotkb": "Calcium/calmodulin-dependent protein kinase IGb isoform X1", "protein_names_refseq": "calcium/calmodulin-dependent protein kinase IGb isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021325441.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005516 calmodulin binding;GO:0005524 ATP binding;GO:0004683 calcium/calmodulin-dependent protein kinase activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0045475 locomotor rhythm", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PSZ5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PT00-1", "uniprot_id": [ { "id": "A0A8M9PT00_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PT00", "type": "external" } ], "mass": 42950.0, "length": 365, "protein_name": "F-box only protein 25", "gene_name": "fbxo25", "organism": "Zebrafish", "refseq_name": "F-box only protein 25 isoform X1", "refseq_ac": [ { "id": "XP_005162452", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162452", "type": "external" } ], "gene_names_uniprotkb": "fbxo25; zgc:100907", "gene_names_refseq": "fbxo25; zgc:100907", "protein_names_uniprotkb": "F-box only protein 25", "protein_names_refseq": "F-box only protein 25 isoform X1", "tax_id": 7955, "disease": "attention deficit hyperactivity disorder (Disease Ontology:DOID:1094)", "pathway": " (dre:403037)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "12234666;15520368;20601059;21793410;23284293;26469318;34439993;35684038;36013390;36164851", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex. May play a role in accumulation of expanded polyglutamine (polyQ) protein huntingtin (HTT)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8QJ99", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A0A8M9PT00-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PT37-1", "uniprot_id": [ { "id": "A0A8M9PT37_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PT37", "type": "external" } ], "mass": 199317.0, "length": 1830, "protein_name": "Tensin-1 isoform X1", "gene_name": "tns1b", "organism": "Zebrafish", "refseq_name": "tensin-1 isoform X1", "refseq_ac": [ { "id": "XP_021334702", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334702", "type": "external" } ], "gene_names_uniprotkb": "tns1b", "gene_names_refseq": "tns1b", "protein_names_uniprotkb": "Tensin-1 isoform X1", "protein_names_refseq": "tensin-1 isoform X1", "tax_id": 7955, "disease": "chronic obstructive pulmonary disease (Disease Ontology:DOID:3083)", "pathway": " (dre:555362)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021334702.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 5, "predicted_n_glycosites": 0, "predicted_o_glycosites": 5, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0004721 phosphoprotein phosphatase activity", "go_cellular_component": "GO:0005925 focal adhesion", "go_biological_process": "GO:0010761 fibroblast migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PT37-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PT54-1", "uniprot_id": [ { "id": "A0A8M9PT54_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PT54", "type": "external" } ], "mass": 71746.0, "length": 625, "protein_name": "Polypeptide N-acetylgalactosaminyltransferase", "gene_name": "galnt3", "organism": "Zebrafish", "refseq_name": "polypeptide N-acetylgalactosaminyltransferase 3", "refseq_ac": [ { "id": "XP_021334717", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334717", "type": "external" } ], "gene_names_uniprotkb": "galnt3", "gene_names_refseq": "galnt3", "protein_names_uniprotkb": "Polypeptide N-acetylgalactosaminyltransferase; 2.4.1.-; Protein-UDP acetylgalactosaminyltransferase", "protein_names_refseq": "polypeptide N-acetylgalactosaminyltransferase 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100331984)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.4.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.1.-", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0030246 carbohydrate binding;GO:0004653 polypeptide N-acetylgalactosaminyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus", "go_biological_process": "GO:0006493 protein O-linked glycosylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PT54-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PT78-1", "uniprot_id": [ { "id": "A0A8M9PT78_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PT78", "type": "external" } ], "mass": 158073.0, "length": 1464, "protein_name": "Desmoglein-2.1-like isoform X1", "gene_name": "dsg2.2", "organism": "Zebrafish", "refseq_name": "desmoglein-2.1-like isoform X1", "refseq_ac": [ { "id": "XP_021324275", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324275", "type": "external" } ], "gene_names_uniprotkb": "dsg2.2", "gene_names_refseq": "dsg2.2", "protein_names_uniprotkb": "Desmoglein-2.1-like isoform X1", "protein_names_refseq": "desmoglein-2.1-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882022)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021324275.2. COMPLETENESS: full length., [RefSeq]; A component of desmosome cell-cell junctions which are required for positive regulation of cellular adhesion. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030057 desmosome", "go_biological_process": "GO:0098609 cell-cell adhesion;GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0045216 cell-cell junction organization;GO:0055113 epiboly involved in gastrulation with mouth forming second", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PT78-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PTD7-1", "uniprot_id": [ { "id": "A0A8M9PTD7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PTD7", "type": "external" } ], "mass": 145335.0, "length": 1350, "protein_name": "Nuclear receptor coactivator 1 isoform X1", "gene_name": "ncoa1", "organism": "Zebrafish", "refseq_name": "nuclear receptor coactivator 1 isoform X1", "refseq_ac": [ { "id": "XP_021324335", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324335", "type": "external" } ], "gene_names_uniprotkb": "ncoa1", "gene_names_refseq": "ncoa1", "protein_names_uniprotkb": "Nuclear receptor coactivator 1 isoform X1", "protein_names_refseq": "nuclear receptor coactivator 1 isoform X1", "tax_id": 7955, "disease": "prostate cancer (Disease Ontology:DOID:10283); thyroid hormone resistance syndrome (Disease Ontology:DOID:11633); hypothyroidism (Disease Ontology:DOID:1459); endometrial carcinoma (Disease Ontology:DOID:2871); breast carcinoma (Disease Ontology:DOID:3459); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:563288); (R-DRE-159418); (R-DRE-192105); (R-DRE-193368); (R-DRE-193807); (R-DRE-211976); (R-DRE-3214847); (R-DRE-3899300); (R-DRE-400206); (R-DRE-9018519); (R-DRE-9029569); (R-DRE-9623433); (R-DRE-9707564)", "pathway_count": 13, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021324335.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "F1Q717;Q5RIG3", "ec_number_list": [], "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0046983 protein dimerization activity;GO:0016922 nuclear receptor binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0032870 cellular response to hormone stimulus;GO:0048513 animal organ development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PTD7-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PTF5-1", "uniprot_id": [ { "id": "A0A8M9PTF5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PTF5", "type": "external" } ], "mass": 77839.0, "length": 720, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC797974", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_021324350", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324350", "type": "external" } ], "gene_names_uniprotkb": "LOC797974", "gene_names_refseq": "LOC797974", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:797974)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021324350.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PTF5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PTU0-1", "uniprot_id": [ { "id": "A0A8M9PTU0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PTU0", "type": "external" } ], "mass": 129686.0, "length": 1176, "protein_name": "Integrin alpha-2", "gene_name": "LOC100333484", "organism": "Zebrafish", "refseq_name": "integrin alpha-2", "refseq_ac": [ { "id": "XP_021334932", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334932", "type": "external" } ], "gene_names_uniprotkb": "LOC100333484", "gene_names_refseq": "LOC100333484", "protein_names_uniprotkb": "Integrin alpha-2", "protein_names_refseq": "integrin alpha-2", "tax_id": 7955, "disease": "", "pathway": " (dre:100333484)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0009986 cell surface;GO:0034666 integrin alpha2-beta1 complex", "go_biological_process": "GO:0007229 integrin-mediated signaling pathway;GO:0098609 cell-cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PTU0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PTZ0-1", "uniprot_id": [ { "id": "A0A8M9PTZ0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PTZ0", "type": "external" } ], "mass": 47966.0, "length": 431, "protein_name": "Alpha-1A adrenergic receptor", "gene_name": "adra1ab", "organism": "Zebrafish", "refseq_name": "alpha-1A adrenergic receptor", "refseq_ac": [ { "id": "XP_021334987", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334987", "type": "external" } ], "gene_names_uniprotkb": "adra1ab", "gene_names_refseq": "adra1ab", "protein_names_uniprotkb": "Alpha-1A adrenergic receptor; Alpha-1A adrenoreceptor", "protein_names_refseq": "alpha-1A adrenergic receptor", "tax_id": 7955, "disease": "nicotine dependence (Disease Ontology:DOID:0050742); Alzheimer's disease (Disease Ontology:DOID:10652); hypertension (Disease Ontology:DOID:10763); polycystic ovary syndrome (Disease Ontology:DOID:11612); bladder neck obstruction (Disease Ontology:DOID:13948); alcohol use disorder (Disease Ontology:DOID:1574); heroin dependence (Disease Ontology:DOID:9976)", "pathway": " (dre:557259)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021334987.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IB14", "ec_number_list": [], "go_molecular_function": "GO:0004938 alpha2-adrenergic receptor activity;GO:0004937 alpha1-adrenergic receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0007267 cell-cell signaling;GO:0043410 positive regulation of MAPK cascade;GO:0071880 adenylate cyclase-activating adrenergic receptor signaling pathway;GO:0071881 adenylate cyclase-inhibiting adrenergic receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PTZ0-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PU00-1", "uniprot_id": [ { "id": "A0A8M9PU00_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PU00", "type": "external" } ], "mass": 85867.0, "length": 769, "protein_name": "Transforming acidic coiled-coil-containing protein 1 isoform X1", "gene_name": "tacc1", "organism": "Zebrafish", "refseq_name": "transforming acidic coiled-coil-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_021334997", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334997", "type": "external" } ], "gene_names_uniprotkb": "tacc1", "gene_names_refseq": "tacc1", "protein_names_uniprotkb": "Transforming acidic coiled-coil-containing protein 1 isoform X1", "protein_names_refseq": "transforming acidic coiled-coil-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:565711)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol;GO:0005856 cytoskeleton", "go_biological_process": "GO:0021987 cerebral cortex development;GO:0007052 mitotic spindle organization;GO:0007097 nuclear migration;GO:0030953 astral microtubule organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PU00-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PUK6-1", "uniprot_id": [ { "id": "A0A8M9PUK6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PUK6", "type": "external" } ], "mass": 80169.0, "length": 712, "protein_name": "Neurofilament light polypeptide", "gene_name": "nefla", "organism": "Zebrafish", "refseq_name": "neurofilament light polypeptide", "refseq_ac": [ { "id": "XP_021324735", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324735", "type": "external" } ], "gene_names_uniprotkb": "nefla", "gene_names_refseq": "nefla", "protein_names_uniprotkb": "Neurofilament light polypeptide", "protein_names_refseq": "neurofilament light polypeptide", "tax_id": 7955, "disease": "congenital hypothyroidism (Disease Ontology:DOID:0050328); fatal familial insomnia (Disease Ontology:DOID:0050433); stroke (Disease Ontology:DOID:0051061); Charcot-Marie-Tooth disease dominant intermediate G (Disease Ontology:DOID:0080294); COVID-19 (Disease Ontology:DOID:0080600); mild cognitive impairment (Disease Ontology:DOID:0080832); Charcot-Marie-Tooth disease type 1F (Disease Ontology:DOID:0110149); Charcot-Marie-Tooth disease type 2E (Disease Ontology:DOID:0110165); Charcot-Marie-Tooth disease (Disease Ontology:DOID:10595); Alzheimer's disease (Disease Ontology:DOID:10652); sciatic neuropathy (Disease Ontology:DOID:11446); Creutzfeldt-Jakob disease (Disease Ontology:DOID:11949); Lewy body dementia (Disease Ontology:DOID:12217); Sjogren's syndrome (Disease Ontology:DOID:12894); Parkinson's disease (Disease Ontology:DOID:14330); hypothyroidism (Disease Ontology:DOID:1459); depressive disorder (Disease Ontology:DOID:1596); transient cerebral ischemia (Disease Ontology:DOID:224); multiple sclerosis (Disease Ontology:DOID:2377); relapsing-remitting multiple sclerosis (Disease Ontology:DOID:2378); invasive ductal carcinoma (Disease Ontology:DOID:3008); demyelinating disease (Disease Ontology:DOID:3213); amyotrophic lateral sclerosis (Disease Ontology:DOID:332); syphilis (Disease Ontology:DOID:4166); human immunodeficiency virus infectious disease (Disease Ontology:DOID:526); acute disseminated encephalomyelitis (Disease Ontology:DOID:639); progressive multifocal leukoencephalopathy (Disease Ontology:DOID:643); vascular dementia (Disease Ontology:DOID:8725); neuromyelitis optica (Disease Ontology:DOID:8869); frontotemporal dementia (Disease Ontology:DOID:9255)", "pathway": " (dre:793912)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 30, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0099184 structural constituent of postsynaptic intermediate filament cytoskeleton", "go_cellular_component": "GO:0030424 axon;GO:0005882 intermediate filament;GO:0099160 postsynaptic intermediate filament cytoskeleton", "go_biological_process": "GO:0033693 neurofilament bundle assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PUK6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PUK7-1", "uniprot_id": [ { "id": "A0A8M9PUK7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PUK7", "type": "external" } ], "mass": 68881.0, "length": 607, "protein_name": "Protein phosphatase Slingshot homolog 1", "gene_name": "si:ch211-203d1.3", "organism": "Zebrafish", "refseq_name": "protein phosphatase Slingshot homolog 3", "refseq_ac": [ { "id": "XP_021328548", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328548", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-203d1.3", "gene_names_refseq": "si:ch211-203d1.3", "protein_names_uniprotkb": "Protein phosphatase Slingshot homolog 1; 3.1.3.16; SSH-like protein 1", "protein_names_refseq": "protein phosphatase Slingshot homolog 3", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:101886694)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021328548.1. COMPLETENESS: full length., [RefSeq]; Protein phosphatase which regulates actin filament dynamics. Dephosphorylates and activates the actin binding/depolymerizing factor cofilin, which subsequently binds to actin filaments and stimulates their disassembly. Inhibitory phosphorylation of cofilin is mediated by LIMK1, which may also be dephosphorylated and inactivated by this protein., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" } ], "go_molecular_function": "GO:0003779 actin binding;GO:0004722 protein serine/threonine phosphatase activity", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0032154 cleavage furrow;GO:0030496 midbody", "go_biological_process": "GO:0030837 negative regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PUK7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PUN0-1", "uniprot_id": [ { "id": "A0A8M9PUN0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PUN0", "type": "external" } ], "mass": 29949.0, "length": 263, "protein_name": "Calcium-binding protein 8 isoform X1", "gene_name": "caln2", "organism": "Zebrafish", "refseq_name": "calcium-binding protein 8 isoform X1", "refseq_ac": [ { "id": "XP_021324760", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021324760", "type": "external" } ], "gene_names_uniprotkb": "caln2", "gene_names_refseq": "caln2", "protein_names_uniprotkb": "Calcium-binding protein 8 isoform X1", "protein_names_refseq": "calcium-binding protein 8 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100007635)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0032588 trans-Golgi network membrane;GO:0048471 perinuclear region of cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PUN0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PUP4-1", "uniprot_id": [ { "id": "A0A8M9PUP4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PUP4", "type": "external" } ], "mass": 41019.0, "length": 375, "protein_name": "Protein NDRG3a isoform X1", "gene_name": "ndrg3a", "organism": "Zebrafish", "refseq_name": "protein NDRG3a isoform X1", "refseq_ac": [ { "id": "XP_005169306", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169306", "type": "external" } ], "gene_names_uniprotkb": "ndrg3a; fc04h03; ndr3; ndrg3; wu:fc04h03; zgc:63551", "gene_names_refseq": "fc04h03; ndr3; ndrg3a; ndrg3; wu:fc04h03; zgc:63551", "protein_names_uniprotkb": "Protein NDRG3a isoform X1", "protein_names_refseq": "protein NDRG3a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:30286)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes. May be involved in neuron differentiation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0007399 nervous system development;GO:0030154 cell differentiation;GO:0016055 Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PUP4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PUQ6-1", "uniprot_id": [ { "id": "A0A8M9PUQ6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PUQ6", "type": "external" } ], "mass": 106738.0, "length": 956, "protein_name": "Sorting nexin-19", "gene_name": "snx19b", "organism": "Zebrafish", "refseq_name": "sorting nexin-19", "refseq_ac": [ { "id": "XP_021328604", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328604", "type": "external" } ], "gene_names_uniprotkb": "snx19b", "gene_names_refseq": "snx19b", "protein_names_uniprotkb": "Sorting nexin-19", "protein_names_refseq": "sorting nexin-19", "tax_id": 7955, "disease": "", "pathway": " (dre:568980)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021328604.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035091 phosphatidylinositol binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PUQ6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PUR8-1", "uniprot_id": [ { "id": "A0A8M9PUR8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PUR8", "type": "external" } ], "mass": 55085.0, "length": 492, "protein_name": "Zinc finger protein 276", "gene_name": "znf276", "organism": "Zebrafish", "refseq_name": "zinc finger protein 276 isoform 1", "refseq_ac": [ { "id": "NP_001428870", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001428870", "type": "external" } ], "gene_names_uniprotkb": "znf276; zgc:158366", "gene_names_refseq": "zgc:158366; znf276", "protein_names_uniprotkb": "Zinc finger protein 276", "protein_names_refseq": "zinc finger protein 276 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100009632)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395014.1269630.1, SRR32588719.4656841.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000025.1. On Jul 10, 2025 this sequence version replaced XP_021326101.1., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0000776 kinetochore", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PUR8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PUS2-1", "uniprot_id": [ { "id": "A0A8M9PUS2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PUS2", "type": "external" } ], "mass": 99018.0, "length": 872, "protein_name": "Rho guanine nucleotide exchange factor 2 isoform X1", "gene_name": "arhgef2b", "organism": "Zebrafish", "refseq_name": "rho guanine nucleotide exchange factor 2 isoform X1", "refseq_ac": [ { "id": "XP_021328624", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328624", "type": "external" } ], "gene_names_uniprotkb": "arhgef2b", "gene_names_refseq": "arhgef2b", "protein_names_uniprotkb": "Rho guanine nucleotide exchange factor 2 isoform X1", "protein_names_refseq": "rho guanine nucleotide exchange factor 2 isoform X1", "tax_id": 7955, "disease": "neurodevelopmental disorder with midbrain and hindbrain malformations (Disease Ontology:DOID:0080312)", "pathway": " (dre:561276)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PUS2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PV15-1", "uniprot_id": [ { "id": "A0A8M9PV15_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PV15", "type": "external" } ], "mass": 79477.0, "length": 708, "protein_name": "DCC-interacting protein 13-alpha", "gene_name": "appl1", "organism": "Zebrafish", "refseq_name": "DCC-interacting protein 13-alpha isoform X1", "refseq_ac": [ { "id": "XP_021335332", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335332", "type": "external" } ], "gene_names_uniprotkb": "appl1", "gene_names_refseq": "appl1", "protein_names_uniprotkb": "DCC-interacting protein 13-alpha; Adapter protein containing PH domain, PTB domain and leucine zipper motif 1", "protein_names_refseq": "DCC-interacting protein 13-alpha isoform X1", "tax_id": 7955, "disease": "maturity-onset diabetes of the young type 14 (Disease Ontology:DOID:0111111)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021335332.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome;GO:0005769 early endosome;GO:0031901 early endosome membrane;GO:0010008 endosome membrane", "go_biological_process": "GO:0071363 cellular response to growth factor stimulus;GO:0023052 signaling;GO:0051050 positive regulation of transport;GO:0009891 positive regulation of biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PV15-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PV60-1", "uniprot_id": [ { "id": "A0A8M9PV60_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PV60", "type": "external" } ], "mass": 71422.0, "length": 652, "protein_name": "Solute carrier organic anion transporter family member", "gene_name": "LOC100536648", "organism": "Zebrafish", "refseq_name": "solute carrier organic anion transporter family member 1C1 isoform X1", "refseq_ac": [ { "id": "XP_073804482", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073804482", "type": "external" } ], "gene_names_uniprotkb": "LOC100536648", "gene_names_refseq": "LOC100536648", "protein_names_uniprotkb": "Solute carrier organic anion transporter family member", "protein_names_refseq": "solute carrier organic anion transporter family member 1C1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100536648)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JDC5", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity", "go_cellular_component": "GO:0016323 basolateral plasma membrane", "go_biological_process": "GO:0006811 monoatomic ion transport;GO:0043252 sodium-independent organic anion transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PV60-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PVD4-1", "uniprot_id": [ { "id": "A0A8M9PVD4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PVD4", "type": "external" } ], "mass": 134829.0, "length": 1219, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "ttbk1b", "organism": "Zebrafish", "refseq_name": "tau-tubulin kinase 1 isoform X1", "refseq_ac": [ { "id": "XP_021328804", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328804", "type": "external" } ], "gene_names_uniprotkb": "ttbk1b", "gene_names_refseq": "ttbk1b", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "tau-tubulin kinase 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100000353)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0015630 microtubule cytoskeleton", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PVD4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PVD7-1", "uniprot_id": [ { "id": "A0A8M9PVD7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PVD7", "type": "external" } ], "mass": 97654.0, "length": 868, "protein_name": "Scm-like with four MBT domains protein 1 isoform X1", "gene_name": "sfmbt1", "organism": "Zebrafish", "refseq_name": "scm-like with four MBT domains protein 1 isoform X1", "refseq_ac": [ { "id": "XP_073772755", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073772755", "type": "external" } ], "gene_names_uniprotkb": "sfmbt1", "gene_names_refseq": "sfmbt1", "protein_names_uniprotkb": "Scm-like with four MBT domains protein 1 isoform X1", "protein_names_refseq": "scm-like with four MBT domains protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100001629)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GSP6", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PVD7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PVE4-1", "uniprot_id": [ { "id": "A0A8M9PVE4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PVE4", "type": "external" } ], "mass": 29810.0, "length": 268, "protein_name": "Synaptoporin isoform X2", "gene_name": "synpra", "organism": "Zebrafish", "refseq_name": "synaptoporin isoform X2", "refseq_ac": [ { "id": "XP_021335477", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335477", "type": "external" } ], "gene_names_uniprotkb": "synpra", "gene_names_refseq": "synpra", "protein_names_uniprotkb": "Synaptoporin isoform X2", "protein_names_refseq": "synaptoporin isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:558290)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane;GO:0008021 synaptic vesicle;GO:0030672 synaptic vesicle membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PVE4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PVI9-1", "uniprot_id": [ { "id": "A0A8M9PVI9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PVI9", "type": "external" } ], "mass": 143176.0, "length": 1260, "protein_name": "Phosphoinositide phospholipase C", "gene_name": "plch2b", "organism": "Zebrafish", "refseq_name": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X1", "refseq_ac": [ { "id": "XP_068080446", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068080446", "type": "external" } ], "gene_names_uniprotkb": "plch2b", "gene_names_refseq": "plch2b", "protein_names_uniprotkb": "Phosphoinositide phospholipase C; 3.1.4.11", "protein_names_refseq": "1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:560919)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. This phospholipase activity is very sensitive to calcium. May be important for formation and maintenance of the neuronal network in the postnatal brain., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.4.11", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.4.11", "type": "external" } ], "go_molecular_function": "GO:0004435 phosphatidylinositol-4,5-bisphosphate phospholipase C activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0016042 lipid catabolic process;GO:0051209 release of sequestered calcium ion into cytosol;GO:0048015 phosphatidylinositol-mediated signaling;GO:0046488 phosphatidylinositol metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PVI9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PVL2-1", "uniprot_id": [ { "id": "A0A8M9PVL2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PVL2", "type": "external" } ], "mass": 115435.0, "length": 1090, "protein_name": "Collagen alpha-2(VI) chain", "gene_name": "col6a2", "organism": "Zebrafish", "refseq_name": "collagen alpha-2(VI) chain isoform X1", "refseq_ac": [ { "id": "XP_021335547", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335547", "type": "external" } ], "gene_names_uniprotkb": "col6a2", "gene_names_refseq": "col6a2", "protein_names_uniprotkb": "Collagen alpha-2(VI) chain", "protein_names_refseq": "collagen alpha-2(VI) chain isoform X1", "tax_id": 7955, "disease": "Ullrich congenital muscular dystrophy 1B (Disease Ontology:DOID:0060942); Bethlem myopathy 1A (Disease Ontology:DOID:0061198); Bethlem myopathy 1B (Disease Ontology:DOID:0061199); myocardial infarction (Disease Ontology:DOID:5844)", "pathway": " (dre:567771)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Collagen VI acts as a cell-binding protein., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 4, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031012 extracellular matrix", "go_biological_process": "GO:0007155 cell adhesion;GO:0007409 axonogenesis;GO:0007517 muscle organ development;GO:0055001 muscle cell development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PVL2-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0100000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PVN0-1", "uniprot_id": [ { "id": "A0A8M9PVN0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PVN0", "type": "external" } ], "mass": 221748.0, "length": 1937, "protein_name": "Myosin heavy chain, fast skeletal muscle-like", "gene_name": "LOC100537594", "organism": "Zebrafish", "refseq_name": "myosin heavy chain, fast skeletal muscle-like", "refseq_ac": [ { "id": "XP_073792928", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073792928", "type": "external" } ], "gene_names_uniprotkb": "LOC100537594", "gene_names_refseq": "LOC100537594", "protein_names_uniprotkb": "Myosin heavy chain, fast skeletal muscle-like", "protein_names_refseq": "myosin heavy chain, fast skeletal muscle-like", "tax_id": 7955, "disease": "", "pathway": " (dre:100537594)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IFB1", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0051015 actin filament binding;GO:0000146 microfilament motor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0032982 myosin filament;GO:0030016 myofibril;GO:0016460 myosin II complex", "go_biological_process": "GO:0048731 system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PVN0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PW15-1", "uniprot_id": [ { "id": "A0A8M9PW15_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PW15", "type": "external" } ], "mass": 203896.0, "length": 1841, "protein_name": "Tuberin", "gene_name": "tsc2", "organism": "Zebrafish", "refseq_name": "tuberin isoform X1", "refseq_ac": [ { "id": "XP_021331278", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331278", "type": "external" } ], "gene_names_uniprotkb": "tsc2; fc16b02; tuberin; wu:fc16b02", "gene_names_refseq": "fc16b02; tsc2; tuberin; wu:fc16b02", "protein_names_uniprotkb": "Tuberin", "protein_names_refseq": "tuberin isoform X1", "tax_id": 7955, "disease": "medulloblastoma (Disease Ontology:DOID:0050902); autism spectrum disorder (Disease Ontology:DOID:0060041); tuberous sclerosis 2 (Disease Ontology:DOID:0080325); Alzheimer's disease (Disease Ontology:DOID:10652); leiomyoma (Disease Ontology:DOID:127); uterine fibroid (Disease Ontology:DOID:13223); tuberous sclerosis (Disease Ontology:DOID:13515); breast cancer (Disease Ontology:DOID:1612); anxiety disorder (Disease Ontology:DOID:2030); angiomyolipoma (Disease Ontology:DOID:3314); hepatic angiomyolipoma (Disease Ontology:DOID:3317); lymphangioleiomyomatosis (Disease Ontology:DOID:3319); pancreatic ductal carcinoma (Disease Ontology:DOID:3587); renal cell carcinoma (Disease Ontology:DOID:4450); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:567524)", "pathway_count": 1, "publication_count": 10, "publication_id_list": "15590740;16466575;19646228;20925120;20959633;36238691;38512806;38739706;38898112;38947496", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021331278.1. COMPLETENESS: full length., [RefSeq]; Catalytic component of the TSC-TBC complex, a multiprotein complex that acts as a negative regulator of the canonical mTORC1 complex, an evolutionarily conserved central nutrient sensor that stimulates anabolic reactions and macromolecule biosynthesis to promote cellular biomass generation and growth. Within the TSC-TBC complex, TSC2 acts as a GTPase-activating protein (GAP) for the small GTPase RHEB, a direct activator of the protein kinase activity of mTORC1. In absence of nutrients, the TSC-TBC complex inhibits mTORC1, thereby preventing phosphorylation of ribosomal protein S6 kinase (RPS6KB1 and RPS6KB2) and EIF4EBP1 (4E-BP1) by the mTORC1 signaling. The TSC-TBC complex is inactivated in response to nutrients, relieving inhibition of mTORC1. Involved in microtubule-mediated protein transport via its ability to regulate mTORC1 signaling. Also stimulates the intrinsic GTPase activity of the Ras-related proteins RAP1A and RAB5., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 15, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0033596 TSC1-TSC2 complex;GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0045202 synapse;GO:0005765 lysosomal membrane", "go_biological_process": "GO:0046627 negative regulation of insulin receptor signaling pathway;GO:0051056 regulation of small GTPase mediated signal transduction;GO:0016241 regulation of macroautophagy;GO:0032007 negative regulation of TOR signaling;GO:0030178 negative regulation of Wnt signaling pathway", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A0A8M9PW15-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PW52-1", "uniprot_id": [ { "id": "A0A8M9PW52_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PW52", "type": "external" } ], "mass": 51356.0, "length": 448, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC103910699", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-2-like isoform X2", "refseq_ac": [ { "id": "XP_021331318", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331318", "type": "external" } ], "gene_names_uniprotkb": "LOC103910699", "gene_names_refseq": "LOC103910699", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-2-like isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:103910699)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021331318.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PW52-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PW69-1", "uniprot_id": [ { "id": "A0A8M9PW69_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PW69", "type": "external" } ], "mass": 87183.0, "length": 793, "protein_name": "Adhesion G protein-coupled receptor G3", "gene_name": "adgrg11", "organism": "Zebrafish", "refseq_name": "adhesion G protein-coupled receptor G3", "refseq_ac": [ { "id": "XP_073789780", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073789780", "type": "external" } ], "gene_names_uniprotkb": "adgrg11", "gene_names_refseq": "adgrg11", "protein_names_uniprotkb": "Adhesion G protein-coupled receptor G3", "protein_names_refseq": "adhesion G protein-coupled receptor G3", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58I6B1;A0AC58I6B3;A0AC58I6B4;A0AC58I6C3;A0AC58I6C4;A0AC58I6D9;A0AC58I6E0", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0007166 cell surface receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PW69-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PW72-1", "uniprot_id": [ { "id": "A0A8M9PW72_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PW72", "type": "external" } ], "mass": 64782.0, "length": 579, "protein_name": "Sorting nexin-11 isoform X1", "gene_name": "snx11", "organism": "Zebrafish", "refseq_name": "sorting nexin-11 isoform X1", "refseq_ac": [ { "id": "XP_021335737", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335737", "type": "external" } ], "gene_names_uniprotkb": "snx11; im:7148910; si:dkey-220f10.6; zgc:136459", "gene_names_refseq": "im:7148910; si:dkey-220f10.6; snx11; zgc:136459", "protein_names_uniprotkb": "Sorting nexin-11 isoform X1", "protein_names_refseq": "sorting nexin-11 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021335737.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:1901981 phosphatidylinositol phosphate binding", "go_cellular_component": "GO:0005768 endosome", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0016050 vesicle organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PW72-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWA7-1", "uniprot_id": [ { "id": "A0A8M9PWA7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWA7", "type": "external" } ], "mass": 93865.0, "length": 833, "protein_name": "Complement component C7", "gene_name": "c7b", "organism": "Zebrafish", "refseq_name": "complement component 7b precursor", "refseq_ac": [ { "id": "NP_001373195", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373195", "type": "external" } ], "gene_names_uniprotkb": "c7b; c7; cb349; si:dkey-246j23.5; wu:fa01f03", "gene_names_refseq": "c7b; c7; cb349; si:dkey-246j23.5; wu:fa01f03", "protein_names_uniprotkb": "Complement component C7", "protein_names_refseq": "C7-1; complement component 7b precursor; complement component 7", "tax_id": 7955, "disease": "complement component 7 deficiency (Disease Ontology:DOID:0060300)", "pathway": " (dre:570832); (R-DRE-166665); (R-DRE-977606)", "pathway_count": 3, "publication_count": 10, "publication_id_list": "16109975;22617254;22805612;25086293;26469318;30547092;30826544;31515263;32094353;34004267", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC100054.1, SRR26395062.959674.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505381, SAMEA3505390 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On Jun 25, 2025 this sequence version replaced NP_001373195.1. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications., [RefSeq]; Component of the membrane attack complex (MAC), a multiprotein complex activated by the complement cascade, which inserts into a target cell membrane and forms a pore, leading to target cell membrane rupture and cell lysis. The MAC is initiated by proteolytic cleavage of C5 into complement C5b in response to the classical, alternative, lectin and GZMK complement pathways. The complement pathways consist in a cascade of proteins that leads to phagocytosis and breakdown of pathogens and signaling that strengthens the adaptive immune system. C7 serves as a membrane anchor. During MAC assembly, associates with C5b and C6 to form the C5b-7 complex, a key lipophilic precursor of the MAC complex, which associates with the outer leaflet and reduces the energy for membrane bending., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1QF24;F1QKJ3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0005579 membrane attack complex;GO:0044218 other organism cell membrane", "go_biological_process": "GO:0045087 innate immune response;GO:0031640 killing of cells of another organism;GO:0006958 complement activation, classical pathway;GO:0006956 complement activation", "synthesized_glycan_count": 0, "hit_score": 1.1, "record_id": "A0A8M9PWA7-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWC8-1", "uniprot_id": [ { "id": "A0A8M9PWC8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWC8", "type": "external" } ], "mass": 12163.0, "length": 120, "protein_name": "Synuclein, gamma b (Breast cancer-specific protein 1) isoform X1", "gene_name": "sncgb", "organism": "Zebrafish", "refseq_name": "synuclein, gamma b (breast cancer-specific protein 1) isoform X1", "refseq_ac": [ { "id": "XP_021335787", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335787", "type": "external" } ], "gene_names_uniprotkb": "sncgb; sncg; zgc:112131", "gene_names_refseq": "sncgb; sncg; zgc:112131", "protein_names_uniprotkb": "Synuclein, gamma b (Breast cancer-specific protein 1) isoform X1", "protein_names_refseq": "synuclein, gamma b (breast cancer-specific protein 1) isoform X1", "tax_id": 7955, "disease": "amyotrophic lateral sclerosis type 1 (Disease Ontology:DOID:0060193); Alzheimer's disease (Disease Ontology:DOID:10652); Lewy body dementia (Disease Ontology:DOID:12217); Parkinson's disease (Disease Ontology:DOID:14330); depressive disorder (Disease Ontology:DOID:1596); breast cancer (Disease Ontology:DOID:1612); glaucoma (Disease Ontology:DOID:1686); pancreatic cancer (Disease Ontology:DOID:1793); pantothenate kinase-associated neurodegeneration (Disease Ontology:DOID:3981); retinoblastoma (Disease Ontology:DOID:768); vascular dementia (Disease Ontology:DOID:8725)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 11, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:1903136 cuprous ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0043025 neuronal cell body;GO:0043679 axon terminus", "go_biological_process": "GO:0050808 synapse organization;GO:0007268 chemical synaptic transmission;GO:0048488 synaptic vesicle endocytosis;GO:0071542 dopaminergic neuron differentiation;GO:0008345 larval locomotory behavior", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PWC8-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWI3-1", "uniprot_id": [ { "id": "A0A8M9PWI3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWI3", "type": "external" } ], "mass": 157082.0, "length": 1402, "protein_name": "DNA-directed RNA polymerase subunit", "gene_name": "polr3a", "organism": "Zebrafish", "refseq_name": "DNA-directed RNA polymerase III subunit RPC1 isoform X1", "refseq_ac": [ { "id": "XP_021335832", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335832", "type": "external" } ], "gene_names_uniprotkb": "polr3a; fb81e09; im:7139382; wu:fb81e09", "gene_names_refseq": "fb81e09; im:7139382; polr3a; wu:fb81e09", "protein_names_uniprotkb": "DNA-directed RNA polymerase subunit; 2.7.7.6", "protein_names_refseq": "DNA-directed RNA polymerase III subunit RPC1 isoform X1", "tax_id": 7955, "disease": "hypomyelinating leukodystrophy (Disease Ontology:DOID:0060786); hypomyelinating leukodystrophy 7 (Disease Ontology:DOID:0060794); Wiedemann-Rautenstrauch syndrome (Disease Ontology:DOID:0081333)", "pathway": " (dre:572258)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "33728688", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021335832.1. COMPLETENESS: full length., [RefSeq]; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.7.6", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.7.6", "type": "external" } ], "go_molecular_function": "GO:0003677 DNA binding;GO:0046872 metal ion binding;GO:0003899 DNA-directed RNA polymerase activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005666 RNA polymerase III complex;GO:0000428 DNA-directed RNA polymerase complex", "go_biological_process": "GO:0042797 tRNA transcription by RNA polymerase III;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M9PWI3-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWJ6-1", "uniprot_id": [ { "id": "A0A8M9PWJ6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWJ6", "type": "external" } ], "mass": 75544.0, "length": 661, "protein_name": "Regulator of G-protein signaling 9", "gene_name": "rgs9b", "organism": "Zebrafish", "refseq_name": "regulator of G-protein signaling 9b isoform X1", "refseq_ac": [ { "id": "XP_021335842", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335842", "type": "external" } ], "gene_names_uniprotkb": "rgs9b; rgs9; zC147H1.2; zgc:73189", "gene_names_refseq": "rgs9b; rgs9; zC147H1.2; zgc:73189", "protein_names_uniprotkb": "Regulator of G-protein signaling 9", "protein_names_refseq": "regulator of G-protein signaling 9b isoform X1", "tax_id": 7955, "disease": "bradyopsia 1 (Disease Ontology:DOID:0070363)", "pathway": " (dre:793087); (R-DRE-418594); (R-DRE-6814122)", "pathway_count": 3, "publication_count": 5, "publication_id_list": "25556858;27189481;28252024;35372349;37070960", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021335842.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0016020 membrane;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0043005 neuron projection", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0035556 intracellular signal transduction;GO:0007601 visual perception;GO:0009968 negative regulation of signal transduction;GO:0008277 regulation of G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.6, "record_id": "A0A8M9PWJ6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWP2-1", "uniprot_id": [ { "id": "A0A8M9PWP2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWP2", "type": "external" } ], "mass": 159124.0, "length": 1437, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "wnk4a", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase WNK4", "refseq_ac": [ { "id": "XP_002663933", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_002663933", "type": "external" } ], "gene_names_uniprotkb": "wnk4a", "gene_names_refseq": "wnk4a", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase WNK4", "tax_id": 7955, "disease": "Gitelman syndrome (Disease Ontology:DOID:0050450); hypertension (Disease Ontology:DOID:10763); transient cerebral ischemia (Disease Ontology:DOID:224); pseudohypoaldosteronism (Disease Ontology:DOID:4479)", "pathway": " (dre:100330953)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_002663933.5. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0019870 potassium channel inhibitor activity;GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:1903288 positive regulation of potassium ion import across plasma membrane;GO:0050801 monoatomic ion homeostasis;GO:0010766 negative regulation of sodium ion transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PWP2-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWP6-1", "uniprot_id": [ { "id": "A0A8M9PWP6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWP6", "type": "external" } ], "mass": 77775.0, "length": 690, "protein_name": "Synembryn", "gene_name": "si:dkey-94f20.4", "organism": "Zebrafish", "refseq_name": "chaperone Ric-8A isoform X1", "refseq_ac": [ { "id": "XP_021335887", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335887", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-94f20.4", "gene_names_refseq": "si:dkey-94f20.4", "protein_names_uniprotkb": "Synembryn; Protein Ric-8", "protein_names_refseq": "chaperone Ric-8A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883577)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Chaperone that specifically binds and folds nascent G alpha proteins prior to G protein heterotrimer formation. Also acts as a guanine nucleotide exchange factor (GEF) for G alpha proteins by stimulating exchange of bound GDP for free GTP., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001965 G-protein alpha-subunit binding;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0005938 cell cortex", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PWP6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PU38-1", "uniprot_id": [ { "id": "A0A8M9PU38_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PU38", "type": "external" } ], "mass": 150100.0, "length": 1381, "protein_name": "WASH complex subunit 2 isoform X1", "gene_name": "washc2c", "organism": "Zebrafish", "refseq_name": "WASH complex subunit 2 isoform X1", "refseq_ac": [ { "id": "XP_021328369", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328369", "type": "external" } ], "gene_names_uniprotkb": "washc2c", "gene_names_refseq": "washc2c", "protein_names_uniprotkb": "WASH complex subunit 2 isoform X1", "protein_names_refseq": "WASH complex subunit 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:567272)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0031901 early endosome membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PU38-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PJD0-1", "uniprot_id": [ { "id": "A0A8M9PJD0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PJD0", "type": "external" } ], "mass": 42527.0, "length": 379, "protein_name": "Neuropeptide Y receptor type 2", "gene_name": "npy2r", "organism": "Zebrafish", "refseq_name": "neuropeptide Y receptor type 2", "refseq_ac": [ { "id": "XP_021331562", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331562", "type": "external" } ], "gene_names_uniprotkb": "npy2r", "gene_names_refseq": "npy2r", "protein_names_uniprotkb": "Neuropeptide Y receptor type 2; NPY-Y2 receptor", "protein_names_refseq": "neuropeptide Y receptor type 2", "tax_id": 7955, "disease": "alcohol dependence (Disease Ontology:DOID:0050741); nicotine dependence (Disease Ontology:DOID:0050742); peripheral artery disease (Disease Ontology:DOID:0050830); morbid obesity (Disease Ontology:DOID:11981); Huntington's disease (Disease Ontology:DOID:12858); major depressive disorder (Disease Ontology:DOID:1470); temporal lobe epilepsy (Disease Ontology:DOID:3328); obesity (Disease Ontology:DOID:9970); cocaine dependence (Disease Ontology:DOID:9975)", "pathway": " (dre:100003852)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021331562.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 9, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0042923 neuropeptide binding;GO:0004983 neuropeptide Y receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005929 cilium;GO:0016020 membrane", "go_biological_process": "GO:0007193 adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway;GO:0007218 neuropeptide signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PJD0-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PK10-1", "uniprot_id": [ { "id": "A0A8M9PK10_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PK10", "type": "external" } ], "mass": 38884.0, "length": 364, "protein_name": "Uncharacterized protein si:dkey-17o15.2", "gene_name": "si:dkey-17o15.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-17o15.2", "refseq_ac": [ { "id": "XP_021332227", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332227", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-17o15.2", "gene_names_refseq": "si:dkey-17o15.2", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-17o15.2", "protein_names_refseq": "uncharacterized protein si:dkey-17o15.2", "tax_id": 7955, "disease": "", "pathway": " (dre:100148319)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IAX2", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding", "go_cellular_component": "GO:0016607 nuclear speck", "go_biological_process": "GO:0006406 mRNA export from nucleus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PK10-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PN14-1", "uniprot_id": [ { "id": "A0A8M9PN14_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PN14", "type": "external" } ], "mass": 93632.0, "length": 834, "protein_name": "P protein", "gene_name": "oca2", "organism": "Zebrafish", "refseq_name": "P protein", "refseq_ac": [ { "id": "XP_021332872", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332872", "type": "external" } ], "gene_names_uniprotkb": "oca2", "gene_names_refseq": "oca2", "protein_names_uniprotkb": "P protein", "protein_names_refseq": "P protein", "tax_id": 7955, "disease": "oculocutaneous albinism (Disease Ontology:DOID:0050632); oculocutaneous albinism type II (Disease Ontology:DOID:0070096); pigmentation disease (Disease Ontology:DOID:10123); squamous cell carcinoma (Disease Ontology:DOID:1749); basal cell carcinoma (Disease Ontology:DOID:2513); actinic keratosis (Disease Ontology:DOID:8866); skin melanoma (Disease Ontology:DOID:8923)", "pathway": " (dre:567419)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021332872.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0055085 transmembrane transport;GO:0043473 pigmentation;GO:0042438 melanin biosynthetic process;GO:0030318 melanocyte differentiation;GO:0050935 iridophore differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PN14-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PRZ2-1", "uniprot_id": [ { "id": "A0A8M9PRZ2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PRZ2", "type": "external" } ], "mass": 240857.0, "length": 2182, "protein_name": "separase", "gene_name": "espl1", "organism": "Zebrafish", "refseq_name": "separin isoform X1", "refseq_ac": [ { "id": "XP_021329798", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329798", "type": "external" } ], "gene_names_uniprotkb": "espl1", "gene_names_refseq": "espl1", "protein_names_uniprotkb": "separase; 3.4.22.49", "protein_names_refseq": "separin isoform X1", "tax_id": 7955, "disease": "breast cancer (Disease Ontology:DOID:1612)", "pathway": " (dre:797406)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021329798.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004197 cysteine-type endopeptidase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006508 proteolysis;GO:0098813 nuclear chromosome segregation;GO:0000280 nuclear division", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PRZ2-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PM00-1", "uniprot_id": [ { "id": "A0A8M9PM00_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PM00", "type": "external" } ], "mass": 53270.0, "length": 482, "protein_name": "Protein ABHD8", "gene_name": "abhd8b", "organism": "Zebrafish", "refseq_name": "protein ABHD8", "refseq_ac": [ { "id": "XP_073772379", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073772379", "type": "external" } ], "gene_names_uniprotkb": "abhd8b", "gene_names_refseq": "abhd8b", "protein_names_uniprotkb": "Protein ABHD8; Alpha/beta hydrolase domain-containing protein 8", "protein_names_refseq": "protein ABHD8", "tax_id": 7955, "disease": "", "pathway": " (dre:101883400)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GRL7;A0AC58GRN4", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity", "go_cellular_component": "", "go_biological_process": "GO:1900226 negative regulation of NLRP3 inflammasome complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PM00-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PL59-1", "uniprot_id": [ { "id": "A0A8M9PL59_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PL59", "type": "external" } ], "mass": 40277.0, "length": 364, "protein_name": "Homeobox protein aristaless-like 3 isoform X1", "gene_name": "alx3", "organism": "Zebrafish", "refseq_name": "homeobox protein aristaless-like 3 isoform X1", "refseq_ac": [ { "id": "XP_021327753", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327753", "type": "external" } ], "gene_names_uniprotkb": "alx3", "gene_names_refseq": "alx3", "protein_names_uniprotkb": "Homeobox protein aristaless-like 3 isoform X1", "protein_names_refseq": "homeobox protein aristaless-like 3 isoform X1", "tax_id": 7955, "disease": "frontonasal dysplasia 1 (Disease Ontology:DOID:0081045)", "pathway": " (dre:566955)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327753.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:1904888 cranial skeletal system development;GO:0006351 DNA-templated transcription;GO:0001755 neural crest cell migration;GO:0014033 neural crest cell differentiation;GO:0048593 camera-type eye morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PL59-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCR5-1", "uniprot_id": [ { "id": "A0A8M2BCR5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCR5", "type": "external" } ], "mass": 67108.0, "length": 588, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101884513", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005165515", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165515", "type": "external" } ], "gene_names_uniprotkb": "LOC101884513", "gene_names_refseq": "LOC101884513", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884513)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005165515.1. COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCR5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BE96-1", "uniprot_id": [ { "id": "A0A8M2BE96_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BE96", "type": "external" } ], "mass": 69697.0, "length": 609, "protein_name": "Tetratricopeptide repeat protein 39A isoform X3", "gene_name": "ttc39a", "organism": "Zebrafish", "refseq_name": "tetratricopeptide repeat protein 39A isoform X3", "refseq_ac": [ { "id": "XP_005166977", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166977", "type": "external" } ], "gene_names_uniprotkb": "ttc39a", "gene_names_refseq": "ttc39a", "protein_names_uniprotkb": "Tetratricopeptide repeat protein 39A isoform X3", "protein_names_refseq": "tetratricopeptide repeat protein 39A isoform X3", "tax_id": 7955, "disease": "", "pathway": " (dre:100320357)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G958", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BE96-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0Y4-1", "uniprot_id": [ { "id": "A0A8M9Q0Y4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0Y4", "type": "external" } ], "mass": 168930.0, "length": 1508, "protein_name": "protein-tyrosine-phosphatase", "gene_name": "ptprt", "organism": "Zebrafish", "refseq_name": "receptor-type tyrosine-protein phosphatase T isoform X1", "refseq_ac": [ { "id": "XP_021332968", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332968", "type": "external" } ], "gene_names_uniprotkb": "ptprt", "gene_names_refseq": "ptprt", "protein_names_uniprotkb": "protein-tyrosine-phosphatase; 3.1.3.48", "protein_names_refseq": "receptor-type tyrosine-protein phosphatase T isoform X1", "tax_id": 7955, "disease": "esophagus squamous cell carcinoma (Disease Ontology:DOID:3748); colorectal cancer (Disease Ontology:DOID:9256)", "pathway": " (dre:567095)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.21", "type": "external" } ], "go_molecular_function": "GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0007507 heart development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q0Y4-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PZT9-1", "uniprot_id": [ { "id": "A0A8M9PZT9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PZT9", "type": "external" } ], "mass": 45377.0, "length": 411, "protein_name": "Transmembrane protein 255A", "gene_name": "tmem255a", "organism": "Zebrafish", "refseq_name": "transmembrane protein 255A isoform X1", "refseq_ac": [ { "id": "XP_021336892", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336892", "type": "external" } ], "gene_names_uniprotkb": "tmem255a", "gene_names_refseq": "tmem255a", "protein_names_uniprotkb": "Transmembrane protein 255A; Protein FAM70A", "protein_names_refseq": "transmembrane protein 255A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:798934)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PZT9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0Z2-1", "uniprot_id": [ { "id": "A0A8M9Q0Z2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0Z2", "type": "external" } ], "mass": 129551.0, "length": 1136, "protein_name": "ELKS/Rab6-interacting/CAST family member 1 isoform X1", "gene_name": "erc1b", "organism": "Zebrafish", "refseq_name": "ELKS/Rab6-interacting/CAST family member 1 isoform X1", "refseq_ac": [ { "id": "XP_021330884", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330884", "type": "external" } ], "gene_names_uniprotkb": "erc1b", "gene_names_refseq": "erc1b", "protein_names_uniprotkb": "ELKS/Rab6-interacting/CAST family member 1 isoform X1", "protein_names_refseq": "ELKS/Rab6-interacting/CAST family member 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:560003)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021330884.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0098882 structural constituent of presynaptic active zone", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0098793 presynapse;GO:0098831 presynaptic active zone cytoplasmic component", "go_biological_process": "GO:0048790 maintenance of presynaptic active zone structure", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9Q0Z2-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q151-1", "uniprot_id": [ { "id": "A0A8M9Q151_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q151", "type": "external" } ], "mass": 107917.0, "length": 990, "protein_name": "Rho GTPase-activating protein 44", "gene_name": "arhgap44a", "organism": "Zebrafish", "refseq_name": "rho GTPase-activating protein 44 isoform X1", "refseq_ac": [ { "id": "XP_021327135", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327135", "type": "external" } ], "gene_names_uniprotkb": "arhgap44a", "gene_names_refseq": "arhgap44a", "protein_names_uniprotkb": "Rho GTPase-activating protein 44; Rho-type GTPase-activating protein RICH2; RhoGAP interacting with CIP4 homologs protein 2", "protein_names_refseq": "rho GTPase-activating protein 44 isoform X1", "tax_id": 7955, "disease": "lung carcinoma (Disease Ontology:DOID:3905); acquired immunodeficiency syndrome (Disease Ontology:DOID:635); hepatocellular carcinoma (Disease Ontology:DOID:684); skin melanoma (Disease Ontology:DOID:8923)", "pathway": " (dre:567298)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327135.1. COMPLETENESS: full length., [RefSeq]; GTPase-activating protein (GAP) that stimulates the GTPase activity of Rho-type GTPases. Thereby, controls Rho-type GTPases cycling between their active GTP-bound and inactive GDP-bound states. Acts as a GAP at least for CDC42 and RAC1. In neurons, is involved in dendritic spine formation and synaptic plasticity in a specific RAC1-GAP activity. Limits the initiation of exploratory dendritic filopodia. Recruited to actin-patches that seed filopodia, binds specifically to plasma membrane sections that are deformed inward by acto-myosin mediated contractile forces. Acts through GAP activity on RAC1 to reduce actin polymerization necessary for filopodia formation. In association with SHANK3, promotes GRIA1 exocytosis from recycling endosomes and spine morphological changes associated to long-term potentiation., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0043197 dendritic spine;GO:0055037 recycling endosome;GO:0098793 presynapse;GO:0005886 plasma membrane;GO:0014069 postsynaptic density", "go_biological_process": "GO:0007165 signal transduction;GO:0032956 regulation of actin cytoskeleton organization;GO:0061001 regulation of dendritic spine morphogenesis;GO:0035021 negative regulation of Rac protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q151-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0T4-1", "uniprot_id": [ { "id": "A0A8M9Q0T4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0T4", "type": "external" } ], "mass": 217710.0, "length": 1952, "protein_name": "protein-tyrosine-phosphatase", "gene_name": "ptprdb", "organism": "Zebrafish", "refseq_name": "protein tyrosine phosphatase receptor type Db isoform X1", "refseq_ac": [ { "id": "XP_021330819", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330819", "type": "external" } ], "gene_names_uniprotkb": "ptprdb; ptprd; zgc:165626", "gene_names_refseq": "ptprdb; ptprd; zgc:165626", "protein_names_uniprotkb": "protein-tyrosine-phosphatase; 3.1.3.48", "protein_names_refseq": "protein tyrosine phosphatase receptor type Db isoform X1", "tax_id": 7955, "disease": "restless legs syndrome (Disease Ontology:DOID:0050425); hypertension (Disease Ontology:DOID:10763); azoospermia (Disease Ontology:DOID:14227); coronary artery disease (Disease Ontology:DOID:3393); diabetes mellitus (Disease Ontology:DOID:9351); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": "", "pathway_count": 0, "publication_count": 8, "publication_id_list": "17498288;19704032;20838449;22326027;23974070;25995451;26469318;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021330819.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.21", "type": "external" } ], "go_molecular_function": "GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0050808 synapse organization", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "A0A8M9Q0T4-1", "record_type": "protein", "filter_code": "0000000.0000110.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYJ9-1", "uniprot_id": [ { "id": "A0A8M9PYJ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYJ9", "type": "external" } ], "mass": 92149.0, "length": 817, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "srpk2", "organism": "Zebrafish", "refseq_name": "SRSF protein kinase 2 isoform X1", "refseq_ac": [ { "id": "XP_021326235", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326235", "type": "external" } ], "gene_names_uniprotkb": "srpk2", "gene_names_refseq": "srpk2", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "SRSF protein kinase 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100333293)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021326235.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0030154 cell differentiation;GO:0035556 intracellular signal transduction;GO:0000245 spliceosomal complex assembly;GO:0050684 regulation of mRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYJ9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWS6-1", "uniprot_id": [ { "id": "A0A8M9PWS6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWS6", "type": "external" } ], "mass": 72027.0, "length": 619, "protein_name": "Uncharacterized protein sp100.1 isoform X1", "gene_name": "sp100.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein sp100.1 isoform X1", "refseq_ac": [ { "id": "XP_021329284", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329284", "type": "external" } ], "gene_names_uniprotkb": "sp100.1", "gene_names_refseq": "sp100.1", "protein_names_uniprotkb": "Uncharacterized protein sp100.1 isoform X1", "protein_names_refseq": "uncharacterized protein sp100.1 isoform X1", "tax_id": 7955, "disease": "hepatic venoocclusive disease with immunodeficiency (Disease Ontology:DOID:0112254); tuberculosis (Disease Ontology:DOID:399)", "pathway": " (dre:796843); (R-DRE-3108214)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1R6N2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PWS6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWV9-1", "uniprot_id": [ { "id": "A0A8M9PWV9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWV9", "type": "external" } ], "mass": 112489.0, "length": 1026, "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "gene_name": "adamts1", "organism": "Zebrafish", "refseq_name": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "refseq_ac": [ { "id": "XP_021331598", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331598", "type": "external" } ], "gene_names_uniprotkb": "adamts1", "gene_names_refseq": "adamts1", "protein_names_uniprotkb": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "protein_names_refseq": "A disintegrin and metalloproteinase with thrombospondin motifs 1", "tax_id": 7955, "disease": "epilepsy (Disease Ontology:DOID:1826); transient cerebral ischemia (Disease Ontology:DOID:224); brain ischemia (Disease Ontology:DOID:2316); ureteral obstruction (Disease Ontology:DOID:5199); urinary tract obstruction (Disease Ontology:DOID:5200); myocardial infarction (Disease Ontology:DOID:5844)", "pathway": " (dre:565145)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JFY1", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0008237 metallopeptidase activity;GO:0046872 metal ion binding", "go_cellular_component": "GO:0031012 extracellular matrix", "go_biological_process": "GO:0006508 proteolysis;GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PWV9-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWY6-1", "uniprot_id": [ { "id": "A0A8M9PWY6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWY6", "type": "external" } ], "mass": 58129.0, "length": 521, "protein_name": "Equilibrative nucleoside transporter 4-like", "gene_name": "slc29a4b", "organism": "Zebrafish", "refseq_name": "equilibrative nucleoside transporter 4-like", "refseq_ac": [ { "id": "XP_698839", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_698839", "type": "external" } ], "gene_names_uniprotkb": "slc29a4b", "gene_names_refseq": "slc29a4b", "protein_names_uniprotkb": "Equilibrative nucleoside transporter 4-like", "protein_names_refseq": "equilibrative nucleoside transporter 4-like", "tax_id": 7955, "disease": "", "pathway": " (dre:570283)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 9, 2008 this sequence version replaced XP_698839.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "R4GEX0", "ec_number_list": [], "go_molecular_function": "GO:0005337 nucleoside transmembrane transporter activity;GO:0008504 monoamine transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PWY6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWZ7-1", "uniprot_id": [ { "id": "A0A8M9PWZ7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWZ7", "type": "external" } ], "mass": 81007.0, "length": 729, "protein_name": "Sentrin-specific protease 1", "gene_name": "senp1", "organism": "Zebrafish", "refseq_name": "sentrin-specific protease 1", "refseq_ac": [ { "id": "XP_021329374", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329374", "type": "external" } ], "gene_names_uniprotkb": "senp1", "gene_names_refseq": "senp1", "protein_names_uniprotkb": "Sentrin-specific protease 1", "protein_names_refseq": "sentrin-specific protease 1", "tax_id": 7955, "disease": "type 1 diabetes mellitus (Disease Ontology:DOID:9744)", "pathway": " (dre:100007636)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021329374.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008234 cysteine-type peptidase activity", "go_cellular_component": "", "go_biological_process": "GO:0006508 proteolysis;GO:0080090 regulation of primary metabolic process;GO:0060255 regulation of macromolecule metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PWZ7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PX16-1", "uniprot_id": [ { "id": "A0A8M9PX16_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PX16", "type": "external" } ], "mass": 92143.0, "length": 820, "protein_name": "Protein-glutamine gamma-glutamyltransferase K", "gene_name": "tgm1l6", "organism": "Zebrafish", "refseq_name": "protein-glutamine gamma-glutamyltransferase K isoform X1", "refseq_ac": [ { "id": "XP_021325715", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325715", "type": "external" } ], "gene_names_uniprotkb": "tgm1l6", "gene_names_refseq": "tgm1l6", "protein_names_uniprotkb": "Protein-glutamine gamma-glutamyltransferase K; 2.3.2.13; Epidermal TGase; Transglutaminase K; Transglutaminase-1", "protein_names_refseq": "protein-glutamine gamma-glutamyltransferase K isoform X1", "tax_id": 7955, "disease": "autosomal recessive congenital ichthyosis 1 (Disease Ontology:DOID:0060656)", "pathway": " (dre:334438)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Catalyzes the cross-linking of proteins and the conjugation of polyamines to proteins. Responsible for cross-linking epidermal proteins during formation of the stratum corneum. Involved in cell proliferation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.3.2.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.13", "type": "external" }, { "id": "3.5.1.44", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.44", "type": "external" } ], "go_molecular_function": "GO:0046872 metal ion binding;GO:0003810 protein-glutamine gamma-glutamyltransferase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0007399 nervous system development;GO:0031424 keratinization;GO:0030216 keratinocyte differentiation;GO:0018149 peptide cross-linking", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PX16-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PX83-1", "uniprot_id": [ { "id": "A0A8M9PX83_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PX83", "type": "external" } ], "mass": 53762.0, "length": 477, "protein_name": "Uncharacterized protein si:dkey-21c1.4 isoform X1", "gene_name": "si:dkey-21c1.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-21c1.4 isoform X1", "refseq_ac": [ { "id": "XP_021336062", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336062", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-21c1.4", "gene_names_refseq": "si:dkey-21c1.4", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-21c1.4 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-21c1.4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100151186)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031966 mitochondrial membrane;GO:0045259 proton-transporting ATP synthase complex", "go_biological_process": "GO:0042776 proton motive force-driven mitochondrial ATP synthesis;GO:1902600 proton transmembrane transport;GO:0006754 ATP biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PX83-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PX85-1", "uniprot_id": [ { "id": "A0A8M9PX85_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PX85", "type": "external" } ], "mass": 165329.0, "length": 1482, "protein_name": "Neurabin-1", "gene_name": "ppp1r9alb", "organism": "Zebrafish", "refseq_name": "uncharacterized protein ppp1r9alb isoform X1", "refseq_ac": [ { "id": "XP_073808150", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073808150", "type": "external" } ], "gene_names_uniprotkb": "ppp1r9alb", "gene_names_refseq": "ppp1r9alb", "protein_names_uniprotkb": "Neurabin-1; Neurabin-I; Neural tissue-specific F-actin-binding protein I; Protein phosphatase 1 regulatory subunit 9A", "protein_names_refseq": "uncharacterized protein ppp1r9alb isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100007681)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JNU7;A0AC58JNX7", "ec_number_list": [], "go_molecular_function": "GO:0051015 actin filament binding;GO:0003779 actin binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0014069 postsynaptic density;GO:0015629 actin cytoskeleton;GO:0030425 dendrite;GO:0005856 cytoskeleton", "go_biological_process": "GO:0007015 actin filament organization;GO:0019722 calcium-mediated signaling;GO:0031175 neuron projection development;GO:0007399 nervous system development;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PX85-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q303-1", "uniprot_id": [ { "id": "A0A8M9Q303_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q303", "type": "external" } ], "mass": 47056.0, "length": 421, "protein_name": "Endophilin-B2b isoform X1", "gene_name": "sh3glb2b", "organism": "Zebrafish", "refseq_name": "endophilin-B2b isoform X1", "refseq_ac": [ { "id": "XP_021331719", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331719", "type": "external" } ], "gene_names_uniprotkb": "sh3glb2b; sh3glb2; zgc:55887", "gene_names_refseq": "sh3glb2b; sh3glb2; zgc:55887", "protein_names_uniprotkb": "Endophilin-B2b isoform X1", "protein_names_refseq": "endophilin-B2b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0061024 membrane organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q303-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PXG2-1", "uniprot_id": [ { "id": "A0A8M9PXG2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PXG2", "type": "external" } ], "mass": 185427.0, "length": 1770, "protein_name": "Mediator of RNA polymerase II transcription subunit 1", "gene_name": "med1", "organism": "Zebrafish", "refseq_name": "mediator of RNA polymerase II transcription subunit 1 isoform 2", "refseq_ac": [ { "id": "NP_001427659", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001427659", "type": "external" } ], "gene_names_uniprotkb": "med1", "gene_names_refseq": "med1; si:ch73-210n19.1", "protein_names_uniprotkb": "Mediator of RNA polymerase II transcription subunit 1; Mediator complex subunit 1", "protein_names_refseq": "mediator of RNA polymerase II transcription subunit 1 isoform 2", "tax_id": 7955, "disease": "dilated cardiomyopathy (Disease Ontology:DOID:12930); congestive heart failure (Disease Ontology:DOID:6000)", "pathway": " (dre:571519)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588730.8325153.1, SRR32588732.18000101.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476730, SAMEA4476746 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000012.1. On May 27, 2025 this sequence version replaced XP_021336132.1., [RefSeq]; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042974 nuclear retinoic acid receptor binding;GO:0046966 nuclear thyroid hormone receptor binding;GO:0003712 transcription coregulator activity;GO:0042809 nuclear vitamin D receptor binding", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0097067 cellular response to thyroid hormone stimulus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PXG2-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PXJ5-1", "uniprot_id": [ { "id": "A0A8M9PXJ5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PXJ5", "type": "external" } ], "mass": 36242.0, "length": 319, "protein_name": "Mitochondrial GTPase 1", "gene_name": "mtg1", "organism": "Zebrafish", "refseq_name": "mitochondrial ribosome-associated GTPase 1 isoform X1", "refseq_ac": [ { "id": "XP_021336162", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336162", "type": "external" } ], "gene_names_uniprotkb": "mtg1; gtpbpl; zgc:109944; zgc:86745", "gene_names_refseq": "gtpbpl; mtg1; zgc:109944; zgc:86745", "protein_names_uniprotkb": "Mitochondrial GTPase 1", "protein_names_refseq": "mitochondrial ribosome-associated GTPase 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0005739 mitochondrion;GO:0005743 mitochondrial inner membrane", "go_biological_process": "GO:0070129 regulation of mitochondrial translation;GO:1902775 mitochondrial large ribosomal subunit assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PXJ5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PXN4-1", "uniprot_id": [ { "id": "A0A8M9PXN4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PXN4", "type": "external" } ], "mass": 40694.0, "length": 359, "protein_name": "Alpha-2,8-sialyltransferase 8F", "gene_name": "st8sia6", "organism": "Zebrafish", "refseq_name": "alpha-2,8-sialyltransferase 8F", "refseq_ac": [ { "id": "XP_021327056", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327056", "type": "external" } ], "gene_names_uniprotkb": "st8sia6", "gene_names_refseq": "st8sia6", "protein_names_uniprotkb": "Alpha-2,8-sialyltransferase 8F", "protein_names_refseq": "alpha-2,8-sialyltransferase 8F", "tax_id": 7955, "disease": "", "pathway": " (dre:553212)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1R0F8", "ec_number_list": [], "go_molecular_function": "GO:0003828 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "GO:0009311 oligosaccharide metabolic process;GO:0006491 N-glycan processing;GO:0021628 olfactory nerve formation;GO:0071699 olfactory placode morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PXN4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PXR7-1", "uniprot_id": [ { "id": "A0A8M9PXR7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PXR7", "type": "external" } ], "mass": 46768.0, "length": 422, "protein_name": "Gap junction protein", "gene_name": "gjd4", "organism": "Zebrafish", "refseq_name": "gap junction delta-4 protein", "refseq_ac": [ { "id": "XP_021325935", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325935", "type": "external" } ], "gene_names_uniprotkb": "gjd4", "gene_names_refseq": "gjd4", "protein_names_uniprotkb": "Gap junction protein", "protein_names_refseq": "gap junction delta-4 protein", "tax_id": 7955, "disease": "", "pathway": " (dre:795763)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58ITC6", "ec_number_list": [], "go_molecular_function": "GO:0005243 gap junction channel activity", "go_cellular_component": "GO:0005922 connexin complex", "go_biological_process": "GO:0007267 cell-cell signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PXR7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PXU5-1", "uniprot_id": [ { "id": "A0A8M9PXU5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PXU5", "type": "external" } ], "mass": 98683.0, "length": 875, "protein_name": "peptidylprolyl isomerase", "gene_name": "fkbp15a", "organism": "Zebrafish", "refseq_name": "FK506-binding protein 15 isoform X1", "refseq_ac": [ { "id": "XP_021329704", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329704", "type": "external" } ], "gene_names_uniprotkb": "fkbp15a", "gene_names_refseq": "fkbp15a", "protein_names_uniprotkb": "peptidylprolyl isomerase; 5.2.1.8", "protein_names_refseq": "FK506-binding protein 15 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:799923)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JPK1", "ec_number_list": [ { "id": "5.2.1.8", "url": "https://www.rhea-db.org/rhea/?query=ec:5.2.1.8", "type": "external" } ], "go_molecular_function": "GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0030426 growth cone", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PXU5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PXZ4-1", "uniprot_id": [ { "id": "A0A8M9PXZ4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PXZ4", "type": "external" } ], "mass": 58268.0, "length": 530, "protein_name": "NHERF family PDZ scaffold protein 4b isoform X1", "gene_name": "nherf4b", "organism": "Zebrafish", "refseq_name": "NHERF family PDZ scaffold protein 4b isoform X1", "refseq_ac": [ { "id": "XP_021331958", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331958", "type": "external" } ], "gene_names_uniprotkb": "nherf4b; pdzd3b; zgc:194812", "gene_names_refseq": "nherf4b; pdzd3b; zgc:194812", "protein_names_uniprotkb": "NHERF family PDZ scaffold protein 4b isoform X1", "protein_names_refseq": "NHERF family PDZ scaffold protein 4b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021331958.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PXZ4-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PXZ7-1", "uniprot_id": [ { "id": "A0A8M9PXZ7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PXZ7", "type": "external" } ], "mass": 76539.0, "length": 695, "protein_name": "E3 ubiquitin-protein ligase RNF220a isoform X1", "gene_name": "rnf220a", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase RNF220a isoform 1", "refseq_ac": [ { "id": "NP_001430222", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001430222", "type": "external" } ], "gene_names_uniprotkb": "rnf220a; zgc:153254", "gene_names_refseq": "rnf220a; zgc:153254", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RNF220a isoform X1", "protein_names_refseq": "E3 ubiquitin-protein ligase RNF220a isoform 1", "tax_id": 7955, "disease": "hypomyelinating leukodystrophy 23 (Disease Ontology:DOID:0070397)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.19434132.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505372 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Sep 10, 2025 this sequence version replaced XP_021336297.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GY98;A0AC58GYA0;A0AC58GYB0", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0021511 spinal cord patterning;GO:0006513 protein monoubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PXZ7-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PY01-1", "uniprot_id": [ { "id": "A0A8M9PY01_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PY01", "type": "external" } ], "mass": 115384.0, "length": 1027, "protein_name": "Ubiquitin-like modifier-activating enzyme 6", "gene_name": "uba6", "organism": "Zebrafish", "refseq_name": "ubiquitin-like modifier-activating enzyme 6", "refseq_ac": [ { "id": "XP_021331963", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021331963", "type": "external" } ], "gene_names_uniprotkb": "uba6", "gene_names_refseq": "uba6", "protein_names_uniprotkb": "Ubiquitin-like modifier-activating enzyme 6; 6.2.1.45; Ubiquitin-activating enzyme E1-like protein 2", "protein_names_refseq": "ubiquitin-like modifier-activating enzyme 6", "tax_id": 7955, "disease": "", "pathway": " (dre:567370); (R-DRE-8866652); (R-DRE-983168)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E9QF30;X1WHW2", "ec_number_list": [ { "id": "2.3.2.34", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.34", "type": "external" }, { "id": "6.2.1.45", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.45", "type": "external" }, { "id": "2.3.2.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.23", "type": "external" }, { "id": "2.3.2.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.3.2.25", "type": "external" }, { "id": "6.2.1.64", "url": "https://www.rhea-db.org/rhea/?query=ec:6.2.1.64", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0046872 metal ion binding;GO:0004839 ubiquitin activating enzyme activity;GO:0019780 FAT10 activating enzyme activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006974 DNA damage response;GO:0016567 protein ubiquitination;GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PY01-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYA5-1", "uniprot_id": [ { "id": "A0A8M9PYA5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYA5", "type": "external" } ], "mass": 197374.0, "length": 1740, "protein_name": "Gypsy retrotransposon integrase-like protein 1", "gene_name": "LOC101886116", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_068074344", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068074344", "type": "external" } ], "gene_names_uniprotkb": "LOC101886116", "gene_names_refseq": "LOC101886116", "protein_names_uniprotkb": "Gypsy retrotransposon integrase-like protein 1; 3.1.26.4", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101886116)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JPQ2;A0AC58JPR1;A0AC58JPR7", "ec_number_list": [], "go_molecular_function": "GO:0003964 RNA-directed DNA polymerase activity;GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding;GO:0004523 RNA-DNA hybrid ribonuclease activity;GO:0008233 peptidase activity", "go_cellular_component": "", "go_biological_process": "GO:0006508 proteolysis;GO:0015074 DNA integration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYA5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYA6-1", "uniprot_id": [ { "id": "A0A8M9PYA6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYA6", "type": "external" } ], "mass": 40813.0, "length": 378, "protein_name": "Protein delta homolog 2", "gene_name": "dlk2", "organism": "Zebrafish", "refseq_name": "protein delta homolog 2 isoform X1", "refseq_ac": [ { "id": "XP_001921712", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001921712", "type": "external" } ], "gene_names_uniprotkb": "dlk2", "gene_names_refseq": "dlk2", "protein_names_uniprotkb": "Protein delta homolog 2; Epidermal growth factor-like protein 9", "protein_names_refseq": "protein delta homolog 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100150992)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001921712.1. COMPLETENESS: full length., [RefSeq]; Regulates adipogenesis., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0005112 Notch binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0016525 negative regulation of angiogenesis;GO:0001944 vasculature development;GO:0045746 negative regulation of Notch signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYA6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYE2-1", "uniprot_id": [ { "id": "A0A8M9PYE2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYE2", "type": "external" } ], "mass": 82045.0, "length": 719, "protein_name": "Probable carboxypeptidase X1", "gene_name": "cpxm1a", "organism": "Zebrafish", "refseq_name": "probable carboxypeptidase X1", "refseq_ac": [ { "id": "XP_021336422", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336422", "type": "external" } ], "gene_names_uniprotkb": "cpxm1a", "gene_names_refseq": "cpxm1a", "protein_names_uniprotkb": "Probable carboxypeptidase X1", "protein_names_refseq": "probable carboxypeptidase X1", "tax_id": 7955, "disease": "", "pathway": " (dre:564830)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4I9C2", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004181 metallocarboxypeptidase activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYE2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYK8-1", "uniprot_id": [ { "id": "A0A8M9PYK8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYK8", "type": "external" } ], "mass": 71509.0, "length": 639, "protein_name": "Sodium/potassium/calcium exchanger 3 isoform X1", "gene_name": "slc24a6a", "organism": "Zebrafish", "refseq_name": "sodium/potassium/calcium exchanger 3 isoform X1", "refseq_ac": [ { "id": "XP_021329984", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329984", "type": "external" } ], "gene_names_uniprotkb": "slc24a6a", "gene_names_refseq": "slc24a6a", "protein_names_uniprotkb": "Sodium/potassium/calcium exchanger 3 isoform X1", "protein_names_refseq": "sodium/potassium/calcium exchanger 3 isoform X1", "tax_id": 7955, "disease": "epilepsy (Disease Ontology:DOID:1826)", "pathway": " (dre:561209)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021329984.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015297 antiporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0006816 calcium ion transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYK8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYM7-1", "uniprot_id": [ { "id": "A0A8M9PYM7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYM7", "type": "external" } ], "mass": 37665.0, "length": 339, "protein_name": "Uracil nucleotide/cysteinyl leukotriene receptor", "gene_name": "gpr17", "organism": "Zebrafish", "refseq_name": "uracil nucleotide/cysteinyl leukotriene receptor", "refseq_ac": [ { "id": "XP_021327441", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327441", "type": "external" } ], "gene_names_uniprotkb": "gpr17", "gene_names_refseq": "gpr17", "protein_names_uniprotkb": "Uracil nucleotide/cysteinyl leukotriene receptor; G-protein coupled receptor 17", "protein_names_refseq": "uracil nucleotide/cysteinyl leukotriene receptor", "tax_id": 7955, "disease": "", "pathway": " (dre:100331841)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327441.1. COMPLETENESS: full length., [RefSeq]; Dual specificity receptor for uracil nucleotides and cysteinyl leukotrienes (CysLTs). Signals through G(i) and inhibition of adenylyl cyclase. May mediate brain damage by nucleotides and CysLTs following ischemia., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008142 oxysterol binding;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0008347 glial cell migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYM7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYR5-1", "uniprot_id": [ { "id": "A0A8M9PYR5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYR5", "type": "external" } ], "mass": 50139.0, "length": 447, "protein_name": "D(1)-like dopamine receptor", "gene_name": "LOC563567", "organism": "Zebrafish", "refseq_name": "D(1)-like dopamine receptor", "refseq_ac": [ { "id": "XP_021330044", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330044", "type": "external" } ], "gene_names_uniprotkb": "LOC563567", "gene_names_refseq": "LOC563567", "protein_names_uniprotkb": "D(1)-like dopamine receptor", "protein_names_refseq": "D(1)-like dopamine receptor", "tax_id": 7955, "disease": "", "pathway": " (dre:563567)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021330044.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004938 alpha2-adrenergic receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0071881 adenylate cyclase-inhibiting adrenergic receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYR5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYS6-1", "uniprot_id": [ { "id": "A0A8M9PYS6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYS6", "type": "external" } ], "mass": 52671.0, "length": 505, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "wu:fj22d03", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_021336562", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336562", "type": "external" } ], "gene_names_uniprotkb": "wu:fj22d03; fj22d03; zgc:136930", "gene_names_refseq": "fj22d03; wu:fj22d03; zgc:136930", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "monilethrix 1 (Disease Ontology:DOID:0061145); monilethrix 2 (Disease Ontology:DOID:0061152); monilethrix 3 (Disease Ontology:DOID:0061153); erythrokeratodermia variabilis et progressiva 5 (Disease Ontology:DOID:0080251); breast cancer (Disease Ontology:DOID:1612); hair disease (Disease Ontology:DOID:421)", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Vimentins are class-III intermediate filaments found in various non-epithelial cells, especially mesenchymal cells. Vimentin is attached to the nucleus, endoplasmic reticulum, and mitochondria, either laterally or terminally., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030280 structural constituent of skin epidermis", "go_cellular_component": "GO:0045095 keratin filament", "go_biological_process": "GO:0031424 keratinization;GO:0045109 intermediate filament organization", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PYS6-1", "record_type": "protein", "filter_code": "0000000.0000110.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYV4-1", "uniprot_id": [ { "id": "A0A8M9PYV4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYV4", "type": "external" } ], "mass": 86564.0, "length": 784, "protein_name": "Uveal autoantigen with coiled-coil domains and ankyrin repeats isoform X1", "gene_name": "uacaa", "organism": "Zebrafish", "refseq_name": "uveal autoantigen with coiled-coil domains and ankyrin repeats isoform X1", "refseq_ac": [ { "id": "XP_021330089", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330089", "type": "external" } ], "gene_names_uniprotkb": "uacaa", "gene_names_refseq": "uacaa", "protein_names_uniprotkb": "Uveal autoantigen with coiled-coil domains and ankyrin repeats isoform X1", "protein_names_refseq": "uveal autoantigen with coiled-coil domains and ankyrin repeats isoform X1", "tax_id": 7955, "disease": "hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:565006)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005829 cytosol", "go_biological_process": "GO:0050728 negative regulation of inflammatory response;GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage;GO:1901223 negative regulation of non-canonical NF-kappaB signal transduction;GO:0008631 intrinsic apoptotic signaling pathway in response to oxidative stress", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYV4-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYW2-1", "uniprot_id": [ { "id": "A0A8M9PYW2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYW2", "type": "external" } ], "mass": 98590.0, "length": 843, "protein_name": "Dynein regulatory complex subunit 7 isoform X1", "gene_name": "ccdc135", "organism": "Zebrafish", "refseq_name": "dynein regulatory complex subunit 7 isoform X1", "refseq_ac": [ { "id": "XP_009296199", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296199", "type": "external" } ], "gene_names_uniprotkb": "ccdc135", "gene_names_refseq": "ccdc135", "protein_names_uniprotkb": "Dynein regulatory complex subunit 7 isoform X1", "protein_names_refseq": "dynein regulatory complex subunit 7 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555782)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7FF32", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031514 motile cilium;GO:0005930 axoneme", "go_biological_process": "GO:0030317 flagellated sperm motility", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYW2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PZ13-1", "uniprot_id": [ { "id": "A0A8M9PZ13_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PZ13", "type": "external" } ], "mass": 57044.0, "length": 511, "protein_name": "Tubby-like protein", "gene_name": "tub", "organism": "Zebrafish", "refseq_name": "tubby protein homolog isoform X1", "refseq_ac": [ { "id": "XP_009301456", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301456", "type": "external" } ], "gene_names_uniprotkb": "tub", "gene_names_refseq": "tub", "protein_names_uniprotkb": "Tubby-like protein", "protein_names_refseq": "tubby protein homolog isoform X1", "tax_id": 7955, "disease": "obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:568677)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005737 cytoplasm;GO:0005929 cilium", "go_biological_process": "GO:0061512 protein localization to cilium", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PZ13-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PZ45-1", "uniprot_id": [ { "id": "A0A8M9PZ45_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PZ45", "type": "external" } ], "mass": 219022.0, "length": 1975, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "alpk3b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein alpk3b isoform X1", "refseq_ac": [ { "id": "XP_021327621", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327621", "type": "external" } ], "gene_names_uniprotkb": "alpk3b", "gene_names_refseq": "alpk3b", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein alpk3b isoform X1", "tax_id": 7955, "disease": "hypertrophic cardiomyopathy 27 (Disease Ontology:DOID:0061102)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327621.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0055013 cardiac muscle cell development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PZ45-1", "record_type": "protein", "filter_code": "0000000.0000010.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PZ52-1", "uniprot_id": [ { "id": "A0A8M9PZ52_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PZ52", "type": "external" } ], "mass": 33785.0, "length": 296, "protein_name": "Vacuolar protein sorting-associated protein 37D", "gene_name": "vps37d", "organism": "Zebrafish", "refseq_name": "vacuolar protein sorting-associated protein 37D", "refseq_ac": [ { "id": "XP_021332328", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332328", "type": "external" } ], "gene_names_uniprotkb": "vps37d", "gene_names_refseq": "vps37d", "protein_names_uniprotkb": "Vacuolar protein sorting-associated protein 37D", "protein_names_refseq": "vacuolar protein sorting-associated protein 37D", "tax_id": 7955, "disease": "", "pathway": " (dre:101884856); (R-DRE-917729)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies. May be involved in cell growth and differentiation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "X1WEV5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031902 late endosome membrane;GO:0000813 ESCRT I complex", "go_biological_process": "GO:0006612 protein targeting to membrane;GO:0006623 protein targeting to vacuole;GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PZ52-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PZC7-1", "uniprot_id": [ { "id": "A0A8M9PZC7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PZC7", "type": "external" } ], "mass": 102083.0, "length": 916, "protein_name": "Netrin receptor UNC5", "gene_name": "unc5a", "organism": "Zebrafish", "refseq_name": "netrin receptor UNC5A isoform X1", "refseq_ac": [ { "id": "XP_021336747", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336747", "type": "external" } ], "gene_names_uniprotkb": "unc5a; zgc:175190", "gene_names_refseq": "unc5a; zgc:175190", "protein_names_uniprotkb": "Netrin receptor UNC5", "protein_names_refseq": "netrin receptor UNC5A isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Receptor for netrin required for axon guidance. Mediates axon repulsion of neuronal growth cones in the developing nervous system upon ligand binding., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005042 netrin receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0033564 anterior/posterior axon guidance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PZC7-1", "record_type": "protein", "filter_code": "0000000.0000000.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PZE4-1", "uniprot_id": [ { "id": "A0A8M9PZE4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PZE4", "type": "external" } ], "mass": 68050.0, "length": 614, "protein_name": "glutaminase", "gene_name": "gls2a", "organism": "Zebrafish", "refseq_name": "glutaminase liver isoform, mitochondrial isoform X1", "refseq_ac": [ { "id": "XP_021327726", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327726", "type": "external" } ], "gene_names_uniprotkb": "gls2a", "gene_names_refseq": "gls2a", "protein_names_uniprotkb": "glutaminase; 3.5.1.2", "protein_names_refseq": "glutaminase liver isoform, mitochondrial isoform X1", "tax_id": 7955, "disease": "developmental and epileptic encephalopathy 71 (Disease Ontology:DOID:0112207)", "pathway": " (dre:100006303)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "6.3.4.16", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.4.16", "type": "external" }, { "id": "2.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.1.3.2", "type": "external" }, { "id": "3.5.2.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.2.3", "type": "external" }, { "id": "6.3.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:6.3.5.5", "type": "external" }, { "id": "3.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0004359 glutaminase activity", "go_cellular_component": "GO:0005739 mitochondrion", "go_biological_process": "GO:0006537 glutamate biosynthetic process;GO:0006543 L-glutamine catabolic process;GO:0006541 glutamine metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PZE4-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PZH1-1", "uniprot_id": [ { "id": "A0A8M9PZH1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PZH1", "type": "external" } ], "mass": 30374.0, "length": 289, "protein_name": "CXXC-type zinc finger protein 5", "gene_name": "cxxc5b", "organism": "Zebrafish", "refseq_name": "CXXC-type zinc finger protein 5 isoform X1", "refseq_ac": [ { "id": "XP_005157213", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005157213", "type": "external" } ], "gene_names_uniprotkb": "cxxc5b", "gene_names_refseq": "cxxc5b", "protein_names_uniprotkb": "CXXC-type zinc finger protein 5", "protein_names_refseq": "CXXC-type zinc finger protein 5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:560916)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7F708", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0008327 methyl-CpG binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PZH1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PZZ9-1", "uniprot_id": [ { "id": "A0A8M9PZZ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PZZ9", "type": "external" } ], "mass": 84290.0, "length": 749, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC110439848", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_021332628", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332628", "type": "external" } ], "gene_names_uniprotkb": "LOC110439848", "gene_names_refseq": "LOC110439848", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:110439848)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021332628.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PZZ9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0D6-1", "uniprot_id": [ { "id": "A0A8M9Q0D6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0D6", "type": "external" } ], "mass": 31928.0, "length": 278, "protein_name": "Microtubule-associated protein RP/EB family member 3", "gene_name": "mapre3b", "organism": "Zebrafish", "refseq_name": "microtubule-associated protein RP/EB family member 3b isoform X1", "refseq_ac": [ { "id": "XP_021330664", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330664", "type": "external" } ], "gene_names_uniprotkb": "mapre3b; fj35g02; wu:fj35g02; zgc:91952", "gene_names_refseq": "fj35g02; mapre3b; wu:fj35g02; zgc:91952", "protein_names_uniprotkb": "Microtubule-associated protein RP/EB family member 3; EB1 protein family member 3; End-binding protein 3; RP3", "protein_names_refseq": "microtubule-associated protein RP/EB family member 3b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:431717)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021330664.1. COMPLETENESS: full length., [RefSeq]; Plus-end tracking protein (+TIP) that binds to the plus-end of microtubules and regulates the dynamics of the microtubule cytoskeleton. Promotes microtubule growth. May be involved in spindle function by stabilizing microtubules and anchoring them at centrosomes. Also acts as a regulator of minus-end microtubule organization: interacts with the complex formed by AKAP9 and PDE4DIP, leading to recruit CAMSAP2 to the Golgi apparatus, thereby tethering non-centrosomal minus-end microtubules to the Golgi, an important step for polarized cell movement. Promotes elongation of CAMSAP2-decorated microtubule stretches on the minus-end of microtubules., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051010 microtubule plus-end binding", "go_cellular_component": "GO:0051233 spindle midzone;GO:0005815 microtubule organizing center;GO:0005881 cytoplasmic microtubule;GO:0035371 microtubule plus-end", "go_biological_process": "GO:0031110 regulation of microtubule polymerization or depolymerization;GO:0051301 cell division;GO:0051225 spindle assembly;GO:0035372 protein localization to microtubule", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q0D6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0I5-1", "uniprot_id": [ { "id": "A0A8M9Q0I5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0I5", "type": "external" } ], "mass": 23022.0, "length": 206, "protein_name": "Fibroblast growth factor-binding protein 1", "gene_name": "fgfbp1b", "organism": "Zebrafish", "refseq_name": "fibroblast growth factor-binding protein 1", "refseq_ac": [ { "id": "XP_021332009", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332009", "type": "external" } ], "gene_names_uniprotkb": "fgfbp1b", "gene_names_refseq": "fgfbp1b", "protein_names_uniprotkb": "Fibroblast growth factor-binding protein 1", "protein_names_refseq": "fibroblast growth factor-binding protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886353); (R-DRE-190377)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7FEC7", "ec_number_list": [], "go_molecular_function": "GO:0019838 growth factor binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0007267 cell-cell signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q0I5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0M8-1", "uniprot_id": [ { "id": "A0A8M9Q0M8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0M8", "type": "external" } ], "mass": 28270.0, "length": 243, "protein_name": "RING finger protein 151 isoform X1", "gene_name": "rnf151", "organism": "Zebrafish", "refseq_name": "RING finger protein 151 isoform X1", "refseq_ac": [ { "id": "XP_021328191", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328191", "type": "external" } ], "gene_names_uniprotkb": "rnf151", "gene_names_refseq": "rnf151", "protein_names_uniprotkb": "RING finger protein 151 isoform X1", "protein_names_refseq": "RING finger protein 151 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100004674)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GXQ9;E7EYH1", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "", "go_biological_process": "GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q0M8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0Q0-1", "uniprot_id": [ { "id": "A0A8M9Q0Q0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0Q0", "type": "external" } ], "mass": 138149.0, "length": 1224, "protein_name": "VPS10 domain-containing receptor SorCS3", "gene_name": "sorcs3a", "organism": "Zebrafish", "refseq_name": "VPS10 domain-containing receptor SorCS3", "refseq_ac": [ { "id": "XP_021332863", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332863", "type": "external" } ], "gene_names_uniprotkb": "sorcs3a", "gene_names_refseq": "sorcs3a", "protein_names_uniprotkb": "VPS10 domain-containing receptor SorCS3", "protein_names_refseq": "VPS10 domain-containing receptor SorCS3", "tax_id": 7955, "disease": "", "pathway": " (dre:100534837)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021332863.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q0Q0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0R5-1", "uniprot_id": [ { "id": "A0A8M9Q0R5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0R5", "type": "external" } ], "mass": 54243.0, "length": 499, "protein_name": "5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase", "gene_name": "dcp1b", "organism": "Zebrafish", "refseq_name": "mRNA-decapping enzyme 1B isoform X1", "refseq_ac": [ { "id": "XP_021330799", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021330799", "type": "external" } ], "gene_names_uniprotkb": "dcp1b; mitc1l; si:ch211-87p6none", "gene_names_refseq": "dcp1b; mitc1l; si:ch211-87p6none", "protein_names_uniprotkb": "5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase; 3.6.1.62", "protein_names_refseq": "mRNA-decapping enzyme 1B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:568176)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.6.1.62", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.62", "type": "external" } ], "go_molecular_function": "GO:0008047 enzyme activator activity;GO:0140933 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA;GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q0R5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0X4-1", "uniprot_id": [ { "id": "A0A8M9Q0X4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0X4", "type": "external" } ], "mass": 219254.0, "length": 1916, "protein_name": "ribonuclease H", "gene_name": "LOC110439877", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_021332953", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021332953", "type": "external" } ], "gene_names_uniprotkb": "LOC110439877", "gene_names_refseq": "LOC110439877", "protein_names_uniprotkb": "ribonuclease H; 3.1.26.4", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:110439877)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021332953.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003676 nucleic acid binding;GO:0004523 RNA-DNA hybrid ribonuclease activity", "go_cellular_component": "", "go_biological_process": "GO:0015074 DNA integration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q0X4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q114-1", "uniprot_id": [ { "id": "A0A8M9Q114_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q114", "type": "external" } ], "mass": 63747.0, "length": 552, "protein_name": "Neuronal acetylcholine receptor subunit alpha-4", "gene_name": "chrna4a", "organism": "Zebrafish", "refseq_name": "neuronal acetylcholine receptor subunit alpha-4", "refseq_ac": [ { "id": "XP_021333008", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333008", "type": "external" } ], "gene_names_uniprotkb": "chrna4a; LOC100537401", "gene_names_refseq": "LOC100537401", "protein_names_uniprotkb": "Neuronal acetylcholine receptor subunit alpha-4", "protein_names_refseq": "neuronal acetylcholine receptor subunit alpha-4", "tax_id": 7955, "disease": "", "pathway": " (dre:100537401)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 3% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021333008.1. COMPLETENESS: full length., [RefSeq]; After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "1.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity;GO:0022848 acetylcholine-gated monoatomic cation-selective channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005892 acetylcholine-gated channel complex;GO:0045202 synapse;GO:0045211 postsynaptic membrane;GO:0043005 neuron projection", "go_biological_process": "GO:0007271 synaptic transmission, cholinergic;GO:0007274 neuromuscular synaptic transmission;GO:0035094 response to nicotine;GO:0095500 acetylcholine receptor signaling pathway;GO:0034220 monoatomic ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q114-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q118-1", "uniprot_id": [ { "id": "A0A8M9Q118_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q118", "type": "external" } ], "mass": 88617.0, "length": 771, "protein_name": "cGMP-dependent protein kinase", "gene_name": "prkg2l", "organism": "Zebrafish", "refseq_name": "cGMP-dependent protein kinase 2 isoform X1", "refseq_ac": [ { "id": "XP_021336392", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336392", "type": "external" } ], "gene_names_uniprotkb": "prkg2l", "gene_names_refseq": "prkg2l", "protein_names_uniprotkb": "cGMP-dependent protein kinase; 2.7.11.12", "protein_names_refseq": "cGMP-dependent protein kinase 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556339)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004692 cGMP-dependent protein kinase activity;GO:0005524 ATP binding;GO:0030553 cGMP binding;GO:0016301 kinase activity", "go_cellular_component": "", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q118-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q144-1", "uniprot_id": [ { "id": "A0A8M9Q144_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q144", "type": "external" } ], "mass": 56545.0, "length": 508, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "si:dkey-112g5.3", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-2-like", "refseq_ac": [ { "id": "XP_017214425", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017214425", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-112g5.3", "gene_names_refseq": "si:dkey-112g5.3", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:797194)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E9QGG6", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q144-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q1B8-1", "uniprot_id": [ { "id": "A0A8M9Q1B8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q1B8", "type": "external" } ], "mass": 58968.0, "length": 560, "protein_name": "RNA-binding protein 14", "gene_name": "rbm14b", "organism": "Zebrafish", "refseq_name": "RNA-binding protein 14b isoform X1", "refseq_ac": [ { "id": "XP_021333123", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333123", "type": "external" } ], "gene_names_uniprotkb": "rbm14b; rbm14; zgc:85696", "gene_names_refseq": "rbm14b; rbm14; zgc:85696", "protein_names_uniprotkb": "RNA-binding protein 14; RNA-binding motif protein 14", "protein_names_refseq": "RNA-binding protein 14b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021333123.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005730 nucleolus;GO:0005737 cytoplasm", "go_biological_process": "GO:0010467 gene expression;GO:0098534 centriole assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q1B8-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q1C1-1", "uniprot_id": [ { "id": "A0A8M9Q1C1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q1C1", "type": "external" } ], "mass": 8347.0, "length": 75, "protein_name": "Guanine nucleotide-binding protein subunit gamma", "gene_name": "gng4", "organism": "Zebrafish", "refseq_name": "guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4", "refseq_ac": [ { "id": "XP_021336583", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336583", "type": "external" } ], "gene_names_uniprotkb": "gng4", "gene_names_refseq": "gng4", "protein_names_uniprotkb": "Guanine nucleotide-binding protein subunit gamma", "protein_names_refseq": "guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4", "tax_id": 7955, "disease": "", "pathway": " (dre:101883928)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0031681 G-protein beta-subunit binding", "go_cellular_component": "GO:0005834 heterotrimeric G-protein complex", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q1C1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q1P6-1", "uniprot_id": [ { "id": "A0A8M9Q1P6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q1P6", "type": "external" } ], "mass": 61273.0, "length": 532, "protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1", "gene_name": "smarcd3b", "organism": "Zebrafish", "refseq_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1", "refseq_ac": [ { "id": "XP_021333238", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333238", "type": "external" } ], "gene_names_uniprotkb": "smarcd3b", "gene_names_refseq": "smarcd3b", "protein_names_uniprotkb": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1", "protein_names_refseq": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574); Coffin-Siris syndrome (Disease Ontology:DOID:1925)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005654 nucleoplasm;GO:0016514 SWI/SNF complex", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0003007 heart morphogenesis;GO:0007368 determination of left/right symmetry;GO:0055007 cardiac muscle cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q1P6-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q1Q9-1", "uniprot_id": [ { "id": "A0A8M9Q1Q9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q1Q9", "type": "external" } ], "mass": 62513.0, "length": 554, "protein_name": "WD repeat-containing protein 76", "gene_name": "wdr76", "organism": "Zebrafish", "refseq_name": "WD repeat-containing protein 76 isoform X1", "refseq_ac": [ { "id": "XP_021333253", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333253", "type": "external" } ], "gene_names_uniprotkb": "wdr76; im:7148605; wu:fd11f08", "gene_names_refseq": "im:7148605; wdr76; wu:fd11f08", "protein_names_uniprotkb": "WD repeat-containing protein 76", "protein_names_refseq": "WD repeat-containing protein 76 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:570063)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "20830285;28092764", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021333253.1. COMPLETENESS: full length., [RefSeq]; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:2000001 regulation of DNA damage checkpoint", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M9Q1Q9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q1S2-1", "uniprot_id": [ { "id": "A0A8M9Q1S2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q1S2", "type": "external" } ], "mass": 103573.0, "length": 935, "protein_name": "A disintegrin and metalloproteinase with thrombospondin motifs 15", "gene_name": "LOC100001991; adamts15b", "organism": "Zebrafish", "refseq_name": "A disintegrin and metalloproteinase with thrombospondin motifs 15", "refseq_ac": [ { "id": "XP_021328606", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328606", "type": "external" } ], "gene_names_uniprotkb": "LOC100001991; adamts15b", "gene_names_refseq": "adamts15b", "protein_names_uniprotkb": "A disintegrin and metalloproteinase with thrombospondin motifs 15", "protein_names_refseq": "A disintegrin and metalloproteinase with thrombospondin motifs 15", "tax_id": 7955, "disease": "", "pathway": " (dre:100001991); (dre:100002059)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021328606.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004222 metalloendopeptidase activity;GO:0046872 metal ion binding;GO:0008270 zinc ion binding;GO:0008237 metallopeptidase activity", "go_cellular_component": "GO:0031012 extracellular matrix", "go_biological_process": "GO:0006508 proteolysis;GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q1S2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q293-1", "uniprot_id": [ { "id": "A0A8M9Q293_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q293", "type": "external" } ], "mass": 191165.0, "length": 1703, "protein_name": "Phospholipid-transporting ATPase ABCA3", "gene_name": "abca3b", "organism": "Zebrafish", "refseq_name": "phospholipid-transporting ATPase ABCA3", "refseq_ac": [ { "id": "XP_009297489", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297489", "type": "external" } ], "gene_names_uniprotkb": "abca3b", "gene_names_refseq": "abca3b", "protein_names_uniprotkb": "Phospholipid-transporting ATPase ABCA3", "protein_names_refseq": "phospholipid-transporting ATPase ABCA3", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); neonatal respiratory failure (Disease Ontology:DOID:11161); respiratory failure (Disease Ontology:DOID:11162); pulmonary alveolar proteinosis (Disease Ontology:DOID:12120); newborn respiratory distress syndrome (Disease Ontology:DOID:12716); interstitial lung disease (Disease Ontology:DOID:3082); lung disease (Disease Ontology:DOID:850)", "pathway": " (dre:564344); (R-DRE-1369062); (R-DRE-5683826)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 7, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4ISK5;A0AC58J1B0", "ec_number_list": [], "go_molecular_function": "GO:0005319 lipid transporter activity;GO:0005524 ATP binding;GO:0042626 ATPase-coupled transmembrane transporter activity;GO:0016887 ATP hydrolysis activity;GO:0140359 ABC-type transporter activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0006869 lipid transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q293-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q298-1", "uniprot_id": [ { "id": "A0A8M9Q298_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q298", "type": "external" } ], "mass": 60877.0, "length": 518, "protein_name": "Sulfotransferase", "gene_name": "chst15a", "organism": "Zebrafish", "refseq_name": "carbohydrate sulfotransferase 15", "refseq_ac": [ { "id": "XP_021328791", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328791", "type": "external" } ], "gene_names_uniprotkb": "chst15a; chst15", "gene_names_refseq": "chst15", "protein_names_uniprotkb": "Sulfotransferase; 2.8.2.-", "protein_names_refseq": "carbohydrate sulfotransferase 15", "tax_id": 7955, "disease": "", "pathway": " (dre:565523)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008146 sulfotransferase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q298-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q2B9-1", "uniprot_id": [ { "id": "A0A8M9Q2B9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q2B9", "type": "external" } ], "mass": 40211.0, "length": 377, "protein_name": "Urea transporter", "gene_name": "si:dkey-183c6.7", "organism": "Zebrafish", "refseq_name": "urea transporter 1", "refseq_ac": [ { "id": "XP_021333463", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333463", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-183c6.7", "gene_names_refseq": "si:dkey-183c6.7", "protein_names_uniprotkb": "Urea transporter", "protein_names_refseq": "urea transporter 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100151479)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G426;A0AC58G432", "ec_number_list": [], "go_molecular_function": "GO:0015204 urea transmembrane transporter activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0071918 urea transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q2B9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q2C4-1", "uniprot_id": [ { "id": "A0A8M9Q2C4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q2C4", "type": "external" } ], "mass": 49940.0, "length": 444, "protein_name": "Uncharacterized protein si:dkeyp-75h12.7 isoform X1", "gene_name": "si:dkeyp-75h12.7", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkeyp-75h12.7 isoform X1", "refseq_ac": [ { "id": "XP_021333468", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333468", "type": "external" } ], "gene_names_uniprotkb": "si:dkeyp-75h12.7", "gene_names_refseq": "si:dkeyp-75h12.7", "protein_names_uniprotkb": "Uncharacterized protein si:dkeyp-75h12.7 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkeyp-75h12.7 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100006302)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G428", "ec_number_list": [], "go_molecular_function": "GO:0004896 cytokine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0019221 cytokine-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q2C4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q2I0-1", "uniprot_id": [ { "id": "A0A8M9Q2I0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q2I0", "type": "external" } ], "mass": 39376.0, "length": 355, "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF", "gene_name": "LOC100535100", "organism": "Zebrafish", "refseq_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF2", "refseq_ac": [ { "id": "XP_021328841", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328841", "type": "external" } ], "gene_names_uniprotkb": "LOC100535100", "gene_names_refseq": "LOC100535100", "protein_names_uniprotkb": "Na(+)/H(+) exchange regulatory cofactor NHE-RF", "protein_names_refseq": "Na(+)/H(+) exchange regulatory cofactor NHE-RF2", "tax_id": 7955, "disease": "", "pathway": " (dre:100535100)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021328841.1. COMPLETENESS: full length., [RefSeq]; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding;GO:0043495 protein-membrane adaptor activity", "go_cellular_component": "GO:0012505 endomembrane system;GO:0016324 apical plasma membrane", "go_biological_process": "GO:0072659 protein localization to plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q2I0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q2R5-1", "uniprot_id": [ { "id": "A0A8M9Q2R5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q2R5", "type": "external" } ], "mass": 74116.0, "length": 690, "protein_name": "Solute carrier organic anion transporter family member", "gene_name": "slco3a1b", "organism": "Zebrafish", "refseq_name": "solute carrier organic anion transporter family member 3A1", "refseq_ac": [ { "id": "XP_699020", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_699020", "type": "external" } ], "gene_names_uniprotkb": "slco3a1b", "gene_names_refseq": "slco3a1b", "protein_names_uniprotkb": "Solute carrier organic anion transporter family member", "protein_names_refseq": "solute carrier organic anion transporter family member 3A1", "tax_id": 7955, "disease": "", "pathway": " (dre:570448)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_699020.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1L1QZA6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016323 basolateral plasma membrane", "go_biological_process": "GO:0006811 monoatomic ion transport;GO:0055085 transmembrane transport;GO:0043252 sodium-independent organic anion transport;GO:0015732 prostaglandin transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q2R5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q2X1-1", "uniprot_id": [ { "id": "A0A8M9Q2X1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q2X1", "type": "external" } ], "mass": 30486.0, "length": 263, "protein_name": "NAD(P)(+)--arginine ADP-ribosyltransferase", "gene_name": "LOC141374989", "organism": "Zebrafish", "refseq_name": "NAD(P)(+)--arginine ADP-ribosyltransferase 2-like", "refseq_ac": [ { "id": "XP_021327800", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327800", "type": "external" } ], "gene_names_uniprotkb": "LOC141374989", "gene_names_refseq": "LOC141374989", "protein_names_uniprotkb": "NAD(P)(+)--arginine ADP-ribosyltransferase; 2.4.2.31; Mono(ADP-ribosyl)transferase", "protein_names_refseq": "NAD(P)(+)--arginine ADP-ribosyltransferase 2-like", "tax_id": 7955, "disease": "", "pathway": " (dre:141374989)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327800.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.4.2.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.4.2.31", "type": "external" } ], "go_molecular_function": "GO:0016779 nucleotidyltransferase activity;GO:0003950 NAD+ poly-ADP-ribosyltransferase activity;GO:0106274 NAD+-protein-arginine ADP-ribosyltransferase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q2X1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q381-1", "uniprot_id": [ { "id": "A0A8M9Q381_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q381", "type": "external" } ], "mass": 57534.0, "length": 523, "protein_name": "Amine oxidase", "gene_name": "si:ch211-127i16.2", "organism": "Zebrafish", "refseq_name": "probable flavin-containing monoamine oxidase A", "refseq_ac": [ { "id": "XP_021327915", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327915", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-127i16.2", "gene_names_refseq": "si:ch211-127i16.2", "protein_names_uniprotkb": "Amine oxidase; 1.4.3.-", "protein_names_refseq": "probable flavin-containing monoamine oxidase A", "tax_id": 7955, "disease": "", "pathway": " (dre:558050)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.4.3.-", "url": "https://www.rhea-db.org/rhea/?query=ec:1.4.3.-", "type": "external" }, { "id": "1.4.3.4", "url": "https://www.rhea-db.org/rhea/?query=ec:1.4.3.4", "type": "external" }, { "id": "1.4.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:1.4.3.21", "type": "external" } ], "go_molecular_function": "GO:0097621 monoamine oxidase activity;GO:0008131 primary methylamine oxidase activity", "go_cellular_component": "GO:0005741 mitochondrial outer membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q381-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q392-1", "uniprot_id": [ { "id": "A0A8M9Q392_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q392", "type": "external" } ], "mass": 110502.0, "length": 972, "protein_name": "Oxysterol-binding protein", "gene_name": "osbpl1a", "organism": "Zebrafish", "refseq_name": "oxysterol-binding protein-related protein 1 isoform X1", "refseq_ac": [ { "id": "XP_021329131", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329131", "type": "external" } ], "gene_names_uniprotkb": "osbpl1a", "gene_names_refseq": "osbpl1a", "protein_names_uniprotkb": "Oxysterol-binding protein", "protein_names_refseq": "oxysterol-binding protein-related protein 1 isoform X1", "tax_id": 7955, "disease": "visceral heterotaxy (Disease Ontology:DOID:0050545)", "pathway": " (dre:565503); (R-DRE-192105)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IQ17", "ec_number_list": [], "go_molecular_function": "GO:0015485 cholesterol binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0097038 perinuclear endoplasmic reticulum", "go_biological_process": "GO:0006869 lipid transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q392-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q393-1", "uniprot_id": [ { "id": "A0A8M9Q393_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q393", "type": "external" } ], "mass": 205590.0, "length": 1827, "protein_name": "Poly [ADP-ribose] polymerase", "gene_name": "LOC110438850", "organism": "Zebrafish", "refseq_name": "protein mono-ADP-ribosyltransferase PARP14-like isoform X1", "refseq_ac": [ { "id": "XP_021327930", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327930", "type": "external" } ], "gene_names_uniprotkb": "LOC110438850", "gene_names_refseq": "LOC110438850", "protein_names_uniprotkb": "Poly [ADP-ribose] polymerase; 2.4.2.-; PARP", "protein_names_refseq": "protein mono-ADP-ribosyltransferase PARP14-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:110438850)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity;GO:0003676 nucleic acid binding;GO:0003950 NAD+ poly-ADP-ribosyltransferase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0010629 negative regulation of gene expression;GO:0060336 negative regulation of type II interferon-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q393-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q3L6-1", "uniprot_id": [ { "id": "A0A8M9Q3L6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q3L6", "type": "external" } ], "mass": 64051.0, "length": 572, "protein_name": "MARVEL domain-containing protein 2b", "gene_name": "marveld2b", "organism": "Zebrafish", "refseq_name": "MARVEL domain-containing protein 2b", "refseq_ac": [ { "id": "NP_001119878", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119878", "type": "external" } ], "gene_names_uniprotkb": "marveld2b; im:7137060; si:ch211-214j8.5", "gene_names_refseq": "im:7137060; marveld2b; si:ch211-214j8.5", "protein_names_uniprotkb": "MARVEL domain-containing protein 2b", "protein_names_refseq": "MARVEL domain-containing protein 2b", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 49 (Disease Ontology:DOID:0110506)", "pathway": " (dre:563122)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26048245;26469318;27189481;36744960", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588726.11485096.1, SRR26395015.1573788.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505389, SAMEA3505392 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000005.1. On Jul 31, 2008 this sequence version replaced XP_708644.2., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A2BGQ4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005923 bicellular tight junction;GO:0016324 apical plasma membrane;GO:0031410 cytoplasmic vesicle", "go_biological_process": "GO:0070830 bicellular tight junction assembly", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M9Q3L6-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q3N3-1", "uniprot_id": [ { "id": "A0A8M9Q3N3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q3N3", "type": "external" } ], "mass": 64394.0, "length": 572, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC110440002", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_021334013", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334013", "type": "external" } ], "gene_names_uniprotkb": "LOC110440002", "gene_names_refseq": "LOC110440002", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:110440002)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021334013.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q3N3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q3P0-1", "uniprot_id": [ { "id": "A0A8M9Q3P0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q3P0", "type": "external" } ], "mass": 121958.0, "length": 1069, "protein_name": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform", "gene_name": "si:rp71-17i16.5", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform", "refseq_ac": [ { "id": "XP_021329311", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329311", "type": "external" } ], "gene_names_uniprotkb": "si:rp71-17i16.5", "gene_names_refseq": "si:rp71-17i16.5", "protein_names_uniprotkb": "Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform; 2.7.1.137; 2.7.1.153; 2.7.1.154; 2.7.11.1; Phosphatidylinositol 4,5-bisphosphate 3-kinase 110 kDa catalytic subunit gamma; Phosphoinositide-3-kinase catalytic gamma polypeptide; Serine/threonine protein kinase PIK3CG; p120-PI3K", "protein_names_refseq": "phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform", "tax_id": 7955, "disease": "", "pathway": " (dre:564261)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding;GO:0016303 1-phosphatidylinositol-3-kinase activity;GO:0046934 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity;GO:0035005 1-phosphatidylinositol-4-phosphate 3-kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005829 cytosol;GO:0005886 plasma membrane;GO:0005944 phosphatidylinositol 3-kinase complex, class IB;GO:0005943 phosphatidylinositol 3-kinase complex, class IA", "go_biological_process": "GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process;GO:0003376 sphingosine-1-phosphate receptor signaling pathway;GO:0001525 angiogenesis;GO:0006897 endocytosis;GO:0006935 chemotaxis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q3P0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q3R1-1", "uniprot_id": [ { "id": "A0A8M9Q3R1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q3R1", "type": "external" } ], "mass": 60837.0, "length": 537, "protein_name": "cyclin-dependent kinase", "gene_name": "cdk16", "organism": "Zebrafish", "refseq_name": "cyclin-dependent kinase 16 isoform X1", "refseq_ac": [ { "id": "XP_021334043", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334043", "type": "external" } ], "gene_names_uniprotkb": "cdk16", "gene_names_refseq": "cdk16", "protein_names_uniprotkb": "cyclin-dependent kinase; 2.7.11.22", "protein_names_refseq": "cyclin-dependent kinase 16 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:559750)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0005524 ATP binding;GO:0004693 cyclin-dependent protein serine/threonine kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0000307 cyclin-dependent protein kinase holoenzyme complex", "go_biological_process": "GO:0031175 neuron projection development;GO:0006887 exocytosis;GO:1901987 regulation of cell cycle phase transition", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q3R1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q3R9-1", "uniprot_id": [ { "id": "A0A8M9Q3R9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q3R9", "type": "external" } ], "mass": 65040.0, "length": 581, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "pimr106", "organism": "Zebrafish", "refseq_name": "uncharacterized protein pimr106", "refseq_ac": [ { "id": "XP_021334053", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334053", "type": "external" } ], "gene_names_uniprotkb": "pimr106", "gene_names_refseq": "pimr106", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "uncharacterized protein pimr106", "tax_id": 7955, "disease": "", "pathway": " (dre:560963)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021334053.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0043066 negative regulation of apoptotic process;GO:0007346 regulation of mitotic cell cycle", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q3R9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B8U4-1", "uniprot_id": [ { "id": "A0A8M2B8U4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B8U4", "type": "external" } ], "mass": 53172.0, "length": 486, "protein_name": "Zinc finger protein 704 isoform X1", "gene_name": "slc2a4rg", "organism": "Zebrafish", "refseq_name": "zinc finger protein 704 isoform X1", "refseq_ac": [ { "id": "XP_005162071", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162071", "type": "external" } ], "gene_names_uniprotkb": "slc2a4rg", "gene_names_refseq": "slc2a4rg", "protein_names_uniprotkb": "Zinc finger protein 704 isoform X1", "protein_names_refseq": "zinc finger protein 704 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:368491)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005162071.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B8U4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B8Z6-1", "uniprot_id": [ { "id": "A0A8M2B8Z6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B8Z6", "type": "external" } ], "mass": 43751.0, "length": 377, "protein_name": "Sarcolemma associated protein b isoform X1", "gene_name": "slmapb", "organism": "Zebrafish", "refseq_name": "sarcolemma associated protein b isoform X1", "refseq_ac": [ { "id": "XP_005162107", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162107", "type": "external" } ], "gene_names_uniprotkb": "slmapb; slmap; zgc:55817", "gene_names_refseq": "slmapb; slmap; zgc:55817", "protein_names_uniprotkb": "Sarcolemma associated protein b isoform X1", "protein_names_refseq": "sarcolemma associated protein b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0002080 acrosomal membrane", "go_biological_process": "GO:0007338 single fertilization;GO:0001675 acrosome assembly", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2B8Z6-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B929-1", "uniprot_id": [ { "id": "A0A8M2B929_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B929", "type": "external" } ], "mass": 65147.0, "length": 591, "protein_name": "Kelch-like protein 17", "gene_name": "klhl17", "organism": "Zebrafish", "refseq_name": "kelch-like protein 17", "refseq_ac": [ { "id": "XP_021329356", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329356", "type": "external" } ], "gene_names_uniprotkb": "klhl17", "gene_names_refseq": "klhl17", "protein_names_uniprotkb": "Kelch-like protein 17; Actinfilin", "protein_names_refseq": "kelch-like protein 17", "tax_id": 7955, "disease": "", "pathway": " (dre:336187)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Substrate-recognition component of some cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complexes. The BCR(KLHL17) complex mediates the ubiquitination and subsequent degradation of GLUR6. May play a role in the actin-based neuronal function., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7FB30", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:1990756 ubiquitin-like ligase-substrate adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0014069 postsynaptic density;GO:0031463 Cul3-RING ubiquitin ligase complex", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B929-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B941-1", "uniprot_id": [ { "id": "A0A8M2B941_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B941", "type": "external" } ], "mass": 54507.0, "length": 483, "protein_name": "Amphoterin-induced protein 1", "gene_name": "LOC110438334", "organism": "Zebrafish", "refseq_name": "amphoterin-induced protein 1", "refseq_ac": [ { "id": "XP_005162172", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162172", "type": "external" } ], "gene_names_uniprotkb": "LOC110438334", "gene_names_refseq": "LOC110438334", "protein_names_uniprotkb": "Amphoterin-induced protein 1", "protein_names_refseq": "amphoterin-induced protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:110438334)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008188 neuropeptide receptor activity;GO:0004930 G protein-coupled receptor activity;GO:0042923 neuropeptide binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0043005 neuron projection", "go_biological_process": "GO:0007218 neuropeptide signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B980-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B982-1", "uniprot_id": [ { "id": "A0A8M2B982_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B982", "type": "external" } ], "mass": 162575.0, "length": 1481, "protein_name": "Nck-associated protein 5-like isoform X1", "gene_name": "kansl2; nckap5l", "organism": "Zebrafish", "refseq_name": "nck-associated protein 5-like isoform X1", "refseq_ac": [ { "id": "XP_005162269", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162269", "type": "external" } ], "gene_names_uniprotkb": "kansl2; nckap5l; id:ibd2059; wu:fb75c02; zgc:103534", "gene_names_refseq": "nckap5l", "protein_names_uniprotkb": "Nck-associated protein 5-like isoform X1", "protein_names_refseq": "nck-associated protein 5-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:568475)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Non-catalytic component of the NSL histone acetyltransferase complex, a multiprotein complex that mediates histone H4 acetylation at 'Lys-5'- and 'Lys-8' (H4K5ac and H4K8ac) at transcription start sites and promotes transcription initiation. Required for NSL complex stability and for transcription of intraciliary transport genes in both ciliated and non-ciliated cells by regulating histone H4 acetylation at 'Lys-5'- and 'Lys-12' (H4K5ac and H4K12ac). This is necessary for cilium assembly in ciliated cells and for organization of the microtubule cytoskeleton in non-ciliated cells. Required within the NSL complex to maintain nuclear architecture stability by promoting KAT8-mediated acetylation of lamin LMNA., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0035371 microtubule plus-end", "go_biological_process": "GO:0007019 microtubule depolymerization;GO:0001578 microtubule bundle formation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B982-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B998-1", "uniprot_id": [ { "id": "A0A8M2B998_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B998", "type": "external" } ], "mass": 65624.0, "length": 609, "protein_name": "Specifically androgen-regulated gene protein", "gene_name": "LOC101883471", "organism": "Zebrafish", "refseq_name": "specifically androgen-regulated gene protein", "refseq_ac": [ { "id": "XP_005162472", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162472", "type": "external" } ], "gene_names_uniprotkb": "LOC101883471", "gene_names_refseq": "LOC101883471", "protein_names_uniprotkb": "Specifically androgen-regulated gene protein", "protein_names_refseq": "specifically androgen-regulated gene protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101883471)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005162472.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B998-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9A9-1", "uniprot_id": [ { "id": "A0A8M2B9A9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9A9", "type": "external" } ], "mass": 44125.0, "length": 390, "protein_name": "C2 calcium-dependent domain-containing protein 4C", "gene_name": "LOC101885966", "organism": "Zebrafish", "refseq_name": "C2 calcium-dependent domain-containing protein 4C", "refseq_ac": [ { "id": "XP_005162533", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162533", "type": "external" } ], "gene_names_uniprotkb": "LOC101885966", "gene_names_refseq": "LOC101885966", "protein_names_uniprotkb": "C2 calcium-dependent domain-containing protein 4C", "protein_names_refseq": "C2 calcium-dependent domain-containing protein 4C", "tax_id": 7955, "disease": "", "pathway": " (dre:101885966)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9A9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9B6-1", "uniprot_id": [ { "id": "A0A8M2B9B6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9B6", "type": "external" } ], "mass": 72202.0, "length": 656, "protein_name": "RalBP1-associated Eps domain-containing protein 2 isoform X1", "gene_name": "reps2", "organism": "Zebrafish", "refseq_name": "ralBP1-associated Eps domain-containing protein 2 isoform X1", "refseq_ac": [ { "id": "XP_005162468", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162468", "type": "external" } ], "gene_names_uniprotkb": "reps2", "gene_names_refseq": "reps2", "protein_names_uniprotkb": "RalBP1-associated Eps domain-containing protein 2 isoform X1", "protein_names_refseq": "ralBP1-associated Eps domain-containing protein 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882936)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005162468.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity;GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0016197 endosomal transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9B6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9C8-1", "uniprot_id": [ { "id": "A0A8M2B9C8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9C8", "type": "external" } ], "mass": 35493.0, "length": 318, "protein_name": "Forkhead box protein B2", "gene_name": "foxb2", "organism": "Zebrafish", "refseq_name": "forkhead box protein B2", "refseq_ac": [ { "id": "XP_005162532", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162532", "type": "external" } ], "gene_names_uniprotkb": "foxb2", "gene_names_refseq": "foxb2", "protein_names_uniprotkb": "Forkhead box protein B2", "protein_names_refseq": "forkhead box protein B2", "tax_id": 7955, "disease": "", "pathway": " (dre:559714)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation;GO:0009888 tissue development;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9C8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9D0-1", "uniprot_id": [ { "id": "A0A8M2B9D0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9D0", "type": "external" } ], "mass": 47782.0, "length": 419, "protein_name": "Actin-related protein 3B isoform X1", "gene_name": "actr3b", "organism": "Zebrafish", "refseq_name": "actin-related protein 3B isoform X1", "refseq_ac": [ { "id": "XP_005162538", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162538", "type": "external" } ], "gene_names_uniprotkb": "actr3b; zgc:158823", "gene_names_refseq": "actr3b; zgc:158823", "protein_names_uniprotkb": "Actin-related protein 3B isoform X1", "protein_names_refseq": "actin-related protein 3B isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2B9D9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9G0-1", "uniprot_id": [ { "id": "A0A8M2B9G0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9G0", "type": "external" } ], "mass": 48582.0, "length": 426, "protein_name": "OTU domain-containing protein 1", "gene_name": "otud1", "organism": "Zebrafish", "refseq_name": "OTU domain-containing protein 1", "refseq_ac": [ { "id": "XP_005162641", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162641", "type": "external" } ], "gene_names_uniprotkb": "otud1", "gene_names_refseq": "otud1", "protein_names_uniprotkb": "OTU domain-containing protein 1; 3.4.19.12", "protein_names_refseq": "OTU domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100537398)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Deubiquitinating enzyme that specifically hydrolyzes 'Lys-63'-linked polyubiquitin to monoubiquitin. Required for the stability and translation of a subset mRNAs with a high abundance of rare codons by mediating deubiquitination of 40S ribosomal protein RPS10/eS10, thereby antagonizing ZNF598-mediated 40S ubiquitination. The abundance of rare codons in mRNAs can limit the translation rate and can lead to ribosome collisions that trigger activation of ribosome quality control (RQC) pathway by ZNF598. 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This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. 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Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9S0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9H9-1", "uniprot_id": [ { "id": "A0A8M2B9H9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9H9", "type": "external" } ], "mass": 29485.0, "length": 261, "protein_name": "Peptidase inhibitor 16", "gene_name": "LOC101883528", "organism": "Zebrafish", "refseq_name": "peptidase inhibitor 16", "refseq_ac": [ { "id": "XP_005162473", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162473", "type": "external" } ], "gene_names_uniprotkb": "LOC101883528", "gene_names_refseq": "LOC101883528", "protein_names_uniprotkb": "Peptidase inhibitor 16", "protein_names_refseq": "peptidase inhibitor 16", "tax_id": 7955, "disease": "", "pathway": " (dre:101883528)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005162473.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9H9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9K2-1", "uniprot_id": [ { "id": "A0A8M2B9K2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9K2", "type": "external" } ], "mass": 101439.0, "length": 885, "protein_name": "Rap guanine nucleotide exchange factor 3 isoform X1", "gene_name": "rapgef3", "organism": "Zebrafish", "refseq_name": "rap guanine nucleotide exchange factor 3 isoform X1", "refseq_ac": [ { "id": "XP_005162410", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162410", "type": "external" } ], "gene_names_uniprotkb": "rapgef3", "gene_names_refseq": "rapgef3", "protein_names_uniprotkb": "Rap guanine nucleotide exchange factor 3 isoform X1", "protein_names_refseq": "rap guanine nucleotide exchange factor 3 isoform X1", "tax_id": 7955, "disease": "nicotine dependence (Disease Ontology:DOID:0050742); congestive heart failure (Disease Ontology:DOID:6000)", "pathway": " (dre:101886094)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0032486 Rap protein signal transduction;GO:0045766 positive regulation of angiogenesis;GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9K2-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9L3-1", "uniprot_id": [ { "id": "A0A8M2B9L3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9L3", "type": "external" } ], "mass": 86590.0, "length": 773, "protein_name": "Microtubule cross-linking factor 3 isoform X1", "gene_name": "mtcl3b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "mtcl3b", "gene_names_refseq": "", "protein_names_uniprotkb": "Microtubule cross-linking factor 3 isoform X1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:336052)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane", "go_biological_process": "GO:0010506 regulation of autophagy", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9L3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9N0-1", "uniprot_id": [ { "id": "A0A8M2B9N0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9N0", "type": "external" } ], "mass": 76681.0, "length": 695, "protein_name": "Vinexin", "gene_name": "sorbs3", "organism": "Zebrafish", "refseq_name": "vinexin", "refseq_ac": [ { "id": "NP_001417908", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001417908", "type": "external" } ], "gene_names_uniprotkb": "sorbs3; si:dkey-162f21.1; zgc:113031", "gene_names_refseq": "si:dkey-162f21.1; sorbs3; zgc:113031", "protein_names_uniprotkb": "Vinexin", "protein_names_refseq": "vinexin", "tax_id": 7955, "disease": "", "pathway": " (dre:541478)", "pathway_count": 1, "publication_count": 7, "publication_id_list": "24004948;26051822;26469318;27189481;29283341;29462671;38414014", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01039268.1, GDQH01003251.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Jun 18, 2024 this sequence version replaced XP_005162522.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0070161 anchoring junction", "go_biological_process": "GO:0007010 cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.8, "record_id": "A0A8M2B9N0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9P0-1", "uniprot_id": [ { "id": "A0A8M2B9P0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9P0", "type": "external" } ], "mass": 140983.0, "length": 1251, "protein_name": "Spermatogenesis-associated protein 13 isoform X1", "gene_name": "spata13", "organism": "Zebrafish", "refseq_name": "spermatogenesis-associated protein 13 isoform X1", "refseq_ac": [ { "id": "XP_021329453", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329453", "type": "external" } ], "gene_names_uniprotkb": "spata13", "gene_names_refseq": "spata13", "protein_names_uniprotkb": "Spermatogenesis-associated protein 13 isoform X1", "protein_names_refseq": "spermatogenesis-associated protein 13 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:568426); (R-DRE-9013148); (R-DRE-9013149)", "pathway_count": 3, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7F6C5", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005737 cytoplasm", "go_biological_process": "GO:0046847 filopodium assembly;GO:0030032 lamellipodium assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9P0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9Q0-1", "uniprot_id": [ { "id": "A0A8M2B9Q0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9Q0", "type": "external" } ], "mass": 65717.0, "length": 587, "protein_name": "Kelch-like protein 34", "gene_name": "klhl34", "organism": "Zebrafish", "refseq_name": "kelch-like protein 34", "refseq_ac": [ { "id": "XP_005162828", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162828", "type": "external" } ], "gene_names_uniprotkb": "klhl34", "gene_names_refseq": "klhl34", "protein_names_uniprotkb": "Kelch-like protein 34", "protein_names_refseq": "kelch-like protein 34", "tax_id": 7955, "disease": "", "pathway": " (dre:561692)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005162828.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9Q0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9Q7-1", "uniprot_id": [ { "id": "A0A8M2B9Q7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9Q7", "type": "external" } ], "mass": 80717.0, "length": 730, "protein_name": "Threonine synthase-like 1", "gene_name": "thnsl1", "organism": "Zebrafish", "refseq_name": "threonine synthase-like 1", "refseq_ac": [ { "id": "XP_005162612", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162612", "type": "external" } ], "gene_names_uniprotkb": "thnsl1", "gene_names_refseq": "thnsl1", "protein_names_uniprotkb": "Threonine synthase-like 1", "protein_names_refseq": "threonine synthase-like 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883988)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005162612.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030170 pyridoxal phosphate binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0008652 amino acid biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9Q7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9R3-1", "uniprot_id": [ { "id": "A0A8M2B9R3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9R3", "type": "external" } ], "mass": 84136.0, "length": 743, "protein_name": "Myb-related protein A isoform X1", "gene_name": "mybl1", "organism": "Zebrafish", "refseq_name": "myb-related protein A isoform X1", "refseq_ac": [ { "id": "XP_005162808", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162808", "type": "external" } ], "gene_names_uniprotkb": "mybl1", "gene_names_refseq": "mybl1", "protein_names_uniprotkb": "Myb-related protein A isoform X1", "protein_names_refseq": "myb-related protein A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:558540)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000278 mitotic cell cycle;GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0010468 regulation of gene expression;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9R3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9S8-1", "uniprot_id": [ { "id": "A0A8M2B9S8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9S8", "type": "external" } ], "mass": 32711.0, "length": 284, "protein_name": "TLC domain-containing protein 4 isoform X1", "gene_name": "tlcd4a", "organism": "Zebrafish", "refseq_name": "TLC domain-containing protein 4 isoform X1", "refseq_ac": [ { "id": "XP_005162909", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162909", "type": "external" } ], "gene_names_uniprotkb": "tlcd4a", "gene_names_refseq": "tlcd4a", "protein_names_uniprotkb": "TLC domain-containing protein 4 isoform X1", "protein_names_refseq": "TLC domain-containing protein 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:571836)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0055088 lipid homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9S8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9T2-1", "uniprot_id": [ { "id": "A0A8M2B9T2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9T2", "type": "external" } ], "mass": 9831.0, "length": 84, "protein_name": "Protein phosphatase 1 regulatory subunit 17", "gene_name": "ppp1r17", "organism": "Zebrafish", "refseq_name": "protein phosphatase 1 regulatory subunit 17", "refseq_ac": [ { "id": "NP_001373505", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373505", "type": "external" } ], "gene_names_uniprotkb": "ppp1r17; si:ch211-56a11.2", "gene_names_refseq": "ppp1r17; si:ch211-56a11.2", "protein_names_uniprotkb": "Protein phosphatase 1 regulatory subunit 17", "protein_names_refseq": "protein phosphatase 1 regulatory subunit 17", "tax_id": 7955, "disease": "familial hypercholesterolemia (Disease Ontology:DOID:13810)", "pathway": " (dre:101884119)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH606824.1, EH611701.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476769, SAMEA4476773 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On Aug 29, 2020 this sequence version replaced XP_005162916.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IFX2", "ec_number_list": [], "go_molecular_function": "GO:0004864 protein phosphatase inhibitor activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2B9T2-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9V7-1", "uniprot_id": [ { "id": "A0A8M2B9V7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9V7", "type": "external" } ], "mass": 282863.0, "length": 2480, "protein_name": "Myosin phosphatase Rho-interacting protein isoform X1", "gene_name": "mpripa; si:ch73-103b11.2", "organism": "Zebrafish", "refseq_name": "myosin phosphatase Rho-interacting protein isoform X1", "refseq_ac": [ { "id": "XP_005162957", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162957", "type": "external" } ], "gene_names_uniprotkb": "mpripa; si:ch73-103b11.2; si:ch73-103b11.2", "gene_names_refseq": "si:ch73-103b11.2", "protein_names_uniprotkb": "Myosin phosphatase Rho-interacting protein isoform X1", "protein_names_refseq": "myosin phosphatase Rho-interacting protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:562530)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051015 actin filament binding;GO:0003779 actin binding", "go_cellular_component": "GO:0015629 actin cytoskeleton", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9V7-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9V9-1", "uniprot_id": [ { "id": "A0A8M2B9V9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9V9", "type": "external" } ], "mass": 70434.0, "length": 636, "protein_name": "Proline-rich protein 35", "gene_name": "prr35", "organism": "Zebrafish", "refseq_name": "proline-rich protein 35", "refseq_ac": [ { "id": "XP_005162944", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162944", "type": "external" } ], "gene_names_uniprotkb": "prr35", "gene_names_refseq": "prr35", "protein_names_uniprotkb": "Proline-rich protein 35", "protein_names_refseq": "proline-rich protein 35", "tax_id": 7955, "disease": "", "pathway": " (dre:101883138)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_005162944.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9V9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BA80-1", "uniprot_id": [ { "id": "A0A8M2BA80_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BA80", "type": "external" } ], "mass": 132499.0, "length": 1237, "protein_name": "Microtubule-associated protein", "gene_name": "LOC100001114", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X2", "refseq_ac": [ { "id": "XP_005162978", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162978", "type": "external" } ], "gene_names_uniprotkb": "LOC100001114", "gene_names_refseq": "LOC100001114", "protein_names_uniprotkb": "Microtubule-associated protein", "protein_names_refseq": "uncharacterized protein isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:100001114)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005162978.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0005874 microtubule;GO:0043005 neuron projection", "go_biological_process": "GO:0031175 neuron projection development;GO:0000226 microtubule cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BA80-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9X2-1", "uniprot_id": [ { "id": "A0A8M2B9X2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9X2", "type": "external" } ], "mass": 32385.0, "length": 285, "protein_name": "Protein phosphatase 1 regulatory subunit 3G", "gene_name": "ppp1r3g", "organism": "Zebrafish", "refseq_name": "protein phosphatase 1 regulatory subunit 3G", "refseq_ac": [ { "id": "XP_005162995", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162995", "type": "external" } ], "gene_names_uniprotkb": "ppp1r3g; si:ch211-152c8.5", "gene_names_refseq": "si:ch211-152c8.5", "protein_names_uniprotkb": "Protein phosphatase 1 regulatory subunit 3G", "protein_names_refseq": "protein phosphatase 1 regulatory subunit 3G", "tax_id": 7955, "disease": "", "pathway": " (dre:100330524)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005162995.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008157 protein phosphatase 1 binding;GO:2001069 glycogen binding", "go_cellular_component": "GO:0000164 protein phosphatase type 1 complex", "go_biological_process": "GO:0005979 regulation of glycogen biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9X2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9X5-1", "uniprot_id": [ { "id": "A0A8M2B9X5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9X5", "type": "external" } ], "mass": 80267.0, "length": 675, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "wu:fb48h12; wu:fb93h01; zgc:112982", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005162753", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162753", "type": "external" } ], "gene_names_uniprotkb": "wu:fb48h12; wu:fb93h01; zgc:112982; fb48h12; fb93h01; wu:fb48h12; wu:fb93h01; zgc:112982", "gene_names_refseq": "fb48h12; fb93h01; wu:fb48h12; wu:fb93h01; zgc:112982", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:503771)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0016592 mediator complex", "go_biological_process": "GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2B9X5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9Y0-1", "uniprot_id": [ { "id": "A0A8M2B9Y0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9Y0", "type": "external" } ], "mass": 98016.0, "length": 863, "protein_name": "Uncharacterized protein palmdb isoform X1", "gene_name": "palmdb", "organism": "Zebrafish", "refseq_name": "uncharacterized protein palmdb isoform X1", "refseq_ac": [ { "id": "XP_005162893", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162893", "type": "external" } ], "gene_names_uniprotkb": "palmdb", "gene_names_refseq": "palmdb", "protein_names_uniprotkb": "Uncharacterized protein palmdb isoform X1", "protein_names_refseq": "uncharacterized protein palmdb isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100000814)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0008360 regulation of cell shape", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9Y0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9Y5-1", "uniprot_id": [ { "id": "A0A8M2B9Y5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9Y5", "type": "external" } ], "mass": 18086.0, "length": 157, "protein_name": "Protein POLR1D-like", "gene_name": "si:ch211-140b10.6", "organism": "Zebrafish", "refseq_name": "protein POLR1D-like", "refseq_ac": [ { "id": "NP_001373485", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373485", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-140b10.6", "gene_names_refseq": "si:ch211-140b10.6", "protein_names_uniprotkb": "Protein POLR1D-like", "protein_names_refseq": "protein POLR1D-like", "tax_id": 7955, "disease": "", "pathway": " (dre:567593)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC124551.1, GFIL01035560.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000024.1. On or before Aug 29, 2020 this sequence version replaced XP_021329448.1, XP_005162796.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7FFI4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2B9Y5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2B9Z8-1", "uniprot_id": [ { "id": "A0A8M2B9Z8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2B9Z8", "type": "external" } ], "mass": 113978.0, "length": 998, "protein_name": "Pleckstrin homology domain-containing family A member 4 isoform X1", "gene_name": "plekha4; si:ch211-234p6.5", "organism": "Zebrafish", "refseq_name": "pleckstrin homology domain-containing family A member 4 isoform X1", "refseq_ac": [ { "id": "XP_005162946", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162946", "type": "external" } ], "gene_names_uniprotkb": "plekha4; si:ch211-234p6.5; si:ch211-234p6.5", "gene_names_refseq": "si:ch211-234p6.5", "protein_names_uniprotkb": "Pleckstrin homology domain-containing family A member 4 isoform X1", "protein_names_refseq": "pleckstrin homology domain-containing family A member 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883353)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005162946.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2B9Z8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BA45-1", "uniprot_id": [ { "id": "A0A8M2BA45_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BA45", "type": "external" } ], "mass": 40583.0, "length": 360, "protein_name": "Zona pellucida glycoprotein d isoform X1", "gene_name": "zpd", "organism": "Zebrafish", "refseq_name": "zona pellucida glycoprotein d isoform X1", "refseq_ac": [ { "id": "XP_005163055", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163055", "type": "external" } ], "gene_names_uniprotkb": "zpd; fi06d01; wu:fi06d01; zgc:66449", "gene_names_refseq": "fi06d01; wu:fi06d01; zgc:66449; zpd", "protein_names_uniprotkb": "Zona pellucida glycoprotein d isoform X1", "protein_names_refseq": "zona pellucida glycoprotein d isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005163055.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0009986 cell surface", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BA45-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAB5-1", "uniprot_id": [ { "id": "A0A8M2BAB5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAB5", "type": "external" } ], "mass": 164769.0, "length": 1467, "protein_name": "S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1", "gene_name": "scaper", "organism": "Zebrafish", "refseq_name": "S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1", "refseq_ac": [ { "id": "XP_005163211", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163211", "type": "external" } ], "gene_names_uniprotkb": "scaper", "gene_names_refseq": "scaper", "protein_names_uniprotkb": "S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1", "protein_names_refseq": "S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1", "tax_id": 7955, "disease": "azoospermia (Disease Ontology:DOID:14227); Bardet-Biedl syndrome (Disease Ontology:DOID:1935)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_005163211.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BAB5-1", "record_type": "protein", "filter_code": "0000000.0000010.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BA68-1", "uniprot_id": [ { "id": "A0A8M2BA68_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BA68", "type": "external" } ], "mass": 35405.0, "length": 309, "protein_name": "Sorting nexin-20", "gene_name": "snx20", "organism": "Zebrafish", "refseq_name": "sorting nexin-20", "refseq_ac": [ { "id": "XP_005163245", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163245", "type": "external" } ], "gene_names_uniprotkb": "snx20", "gene_names_refseq": "snx20", "protein_names_uniprotkb": "Sorting nexin-20", "protein_names_refseq": "sorting nexin-20", "tax_id": 7955, "disease": "", "pathway": " (dre:794759)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005163245.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R9YJQ2", "ec_number_list": [], "go_molecular_function": "GO:1901981 phosphatidylinositol phosphate binding", "go_cellular_component": "GO:0031901 early endosome membrane", "go_biological_process": "GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BA68-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BA76-1", "uniprot_id": [ { "id": "A0A8M2BA76_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BA76", "type": "external" } ], "mass": 186818.0, "length": 1671, "protein_name": "PHD and RING finger domain-containing protein 1 isoform X1", "gene_name": "phrf1", "organism": "Zebrafish", "refseq_name": "PHD and RING finger domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005163156", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163156", "type": "external" } ], "gene_names_uniprotkb": "phrf1", "gene_names_refseq": "phrf1", "protein_names_uniprotkb": "PHD and RING finger domain-containing protein 1 isoform X1", "protein_names_refseq": "PHD and RING finger domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:321905)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005163156.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IYF6;A0AC58IYG5", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BA76-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAA1-1", "uniprot_id": [ { "id": "A0A8M2BAA1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAA1", "type": "external" } ], "mass": 109776.0, "length": 998, "protein_name": "Uncharacterized protein prr33", "gene_name": "prr33", "organism": "Zebrafish", "refseq_name": "uncharacterized protein prr33", "refseq_ac": [ { "id": "XP_005163210", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163210", "type": "external" } ], "gene_names_uniprotkb": "prr33", "gene_names_refseq": "prr33", "protein_names_uniprotkb": "Uncharacterized protein prr33", "protein_names_refseq": "uncharacterized protein prr33", "tax_id": 7955, "disease": "", "pathway": " (dre:101886780)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BAA1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAC2-1", "uniprot_id": [ { "id": "A0A8M2BAC2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAC2", "type": "external" } ], "mass": 53181.0, "length": 472, "protein_name": "BTB/POZ domain-containing protein 10a isoform X1", "gene_name": "btbd10a", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "btbd10a; zgc:162220", "gene_names_refseq": "", "protein_names_uniprotkb": "BTB/POZ domain-containing protein 10a isoform X1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BAC2-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAC5-1", "uniprot_id": [ { "id": "A0A8M2BAC5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAC5", "type": "external" } ], "mass": 41458.0, "length": 381, "protein_name": "17-beta-hydroxysteroid dehydrogenase type 2 isoform X1", "gene_name": "hsd17b2", "organism": "Zebrafish", "refseq_name": "17-beta-hydroxysteroid dehydrogenase type 2 isoform X1", "refseq_ac": [ { "id": "XP_005163234", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163234", "type": "external" } ], "gene_names_uniprotkb": "hsd17b2", "gene_names_refseq": "hsd17b2", "protein_names_uniprotkb": "17-beta-hydroxysteroid dehydrogenase type 2 isoform X1", "protein_names_refseq": "17-beta-hydroxysteroid dehydrogenase type 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005163234.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016229 steroid dehydrogenase activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "", "go_biological_process": "GO:0008202 steroid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BAC5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAE5-1", "uniprot_id": [ { "id": "A0A8M2BAE5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAE5", "type": "external" } ], "mass": 18731.0, "length": 164, "protein_name": "Uncharacterized protein si:dkey-234i14.2 isoform X1", "gene_name": "si:dkey-234i14.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-234i14.2 isoform X1", "refseq_ac": [ { "id": "XP_005163273", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163273", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-234i14.2", "gene_names_refseq": "si:dkey-234i14.2", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-234i14.2 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-234i14.2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100329265)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BAE5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAQ8-1", "uniprot_id": [ { "id": "A0A8M2BAQ8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAQ8", "type": "external" } ], "mass": 59479.0, "length": 518, "protein_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1", "gene_name": "smarcd3a", "organism": "Zebrafish", "refseq_name": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1", "refseq_ac": [ { "id": "XP_005163573", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163573", "type": "external" } ], "gene_names_uniprotkb": "smarcd3a", "gene_names_refseq": "smarcd3a", "protein_names_uniprotkb": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1", "protein_names_refseq": "SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574); Coffin-Siris syndrome (Disease Ontology:DOID:1925)", "pathway": " (dre:564652)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005634 nucleus;GO:0016514 SWI/SNF complex", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BAQ8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAQ5-1", "uniprot_id": [ { "id": "A0A8M2BAQ5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAQ5", "type": "external" } ], "mass": 41713.0, "length": 372, "protein_name": "(Lyso)-N-acylphosphatidylethanolamine lipase", "gene_name": "abhd4", "organism": "Zebrafish", "refseq_name": "(Lyso)-N-acylphosphatidylethanolamine lipase isoform X1", "refseq_ac": [ { "id": "XP_005163656", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163656", "type": "external" } ], "gene_names_uniprotkb": "abhd4; zgc:110267", "gene_names_refseq": "abhd4; zgc:110267", "protein_names_uniprotkb": "(Lyso)-N-acylphosphatidylethanolamine lipase; Alpha/beta hydrolase domain-containing protein 4; Alpha/beta-hydrolase 4", "protein_names_refseq": "(Lyso)-N-acylphosphatidylethanolamine lipase isoform X1", "tax_id": 7955, "disease": "Chanarin-Dorfman syndrome (Disease Ontology:DOID:0050729); obesity (Disease Ontology:DOID:9970)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Lysophospholipase selective for N-acyl phosphatidylethanolamine (NAPE). Contributes to the biosynthesis of N-acyl ethanolamines, including the endocannabinoid anandamide by hydrolyzing the sn-1 and sn-2 acyl chains from N-acyl phosphatidylethanolamine (NAPE) generating glycerophospho-N-acyl ethanolamine (GP-NAE), an intermediate for N-acyl ethanolamine biosynthesis. Hydrolyzes substrates bearing saturated, monounsaturated, polyunsaturated N-acyl chains. Shows no significant activity towards other lysophospholipids, including lysophosphatidylcholine, lysophosphatidylethanolamine and lysophosphatidylserine., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.1.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.1.4", "type": "external" } ], "go_molecular_function": "GO:0042171 lysophosphatidic acid acyltransferase activity;GO:0004622 phosphatidylcholine lysophospholipase activity", "go_cellular_component": "GO:0005811 lipid droplet", "go_biological_process": "GO:0006654 phosphatidic acid biosynthetic process;GO:0055088 lipid homeostasis;GO:0016042 lipid catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BAQ5-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAS0-1", "uniprot_id": [ { "id": "A0A8M2BAS0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAS0", "type": "external" } ], "mass": 63274.0, "length": 551, "protein_name": "E3 ubiquitin/ISG15 ligase TRIM25", "gene_name": "ftr26", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin/ISG15 ligase TRIM25", "refseq_ac": [ { "id": "XP_005163616", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163616", "type": "external" } ], "gene_names_uniprotkb": "ftr26", "gene_names_refseq": "ftr26", "protein_names_uniprotkb": "E3 ubiquitin/ISG15 ligase TRIM25", "protein_names_refseq": "E3 ubiquitin/ISG15 ligase TRIM25", "tax_id": 7955, "disease": "", "pathway": " (dre:560716)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005163616.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016874 ligase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BAS0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAU1-1", "uniprot_id": [ { "id": "A0A8M2BAU1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAU1", "type": "external" } ], "mass": 63388.0, "length": 558, "protein_name": "E3 ubiquitin/ISG15 ligase TRIM25", "gene_name": "ftr34", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin/ISG15 ligase TRIM25", "refseq_ac": [ { "id": "XP_005163669", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163669", "type": "external" } ], "gene_names_uniprotkb": "ftr34", "gene_names_refseq": "ftr34", "protein_names_uniprotkb": "E3 ubiquitin/ISG15 ligase TRIM25", "protein_names_refseq": "E3 ubiquitin/ISG15 ligase TRIM25", "tax_id": 7955, "disease": "", "pathway": " (dre:100301513)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0016874 ligase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BAU1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAU6-1", "uniprot_id": [ { "id": "A0A8M2BAU6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAU6", "type": "external" } ], "mass": 44655.0, "length": 397, "protein_name": "Coiled-coil domain-containing protein 24", "gene_name": "ccdc24", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 24", "refseq_ac": [ { "id": "NP_001313307", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001313307", "type": "external" } ], "gene_names_uniprotkb": "ccdc24; wu:fc21f03; zgc:113043", "gene_names_refseq": "ccdc24; wu:fc21f03; zgc:113043", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 24", "protein_names_refseq": "coiled-coil domain-containing protein 24", "tax_id": 7955, "disease": "", "pathway": " (dre:541495)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;36077382", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588727.3242679.1, SRR32588731.3253668.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN06350654 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1 and DT063873.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BAU6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BAW3-1", "uniprot_id": [ { "id": "A0A8M2BAW3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BAW3", "type": "external" } ], "mass": 42081.0, "length": 363, "protein_name": "Atypical chemokine receptor 2", "gene_name": "LOC101887081", "organism": "Zebrafish", "refseq_name": "atypical chemokine receptor 2", "refseq_ac": [ { "id": "XP_005163720", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163720", "type": "external" } ], "gene_names_uniprotkb": "LOC101887081", "gene_names_refseq": "LOC101887081", "protein_names_uniprotkb": "Atypical chemokine receptor 2", "protein_names_refseq": "atypical chemokine receptor 2", "tax_id": 7955, "disease": "", "pathway": " (dre:101887081)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003682 chromatin binding;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0045892 negative regulation of DNA-templated transcription;GO:0006325 chromatin organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BB29-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BB33-1", "uniprot_id": [ { "id": "A0A8M2BB33_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BB33", "type": "external" } ], "mass": 68835.0, "length": 632, "protein_name": "HMG domain-containing protein 4a isoform X1", "gene_name": "hmgxb4a", "organism": "Zebrafish", "refseq_name": "HMG domain-containing protein 4a isoform X1", "refseq_ac": [ { "id": "XP_005163967", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163967", "type": "external" } ], "gene_names_uniprotkb": "hmgxb4a; si:dkeyp-69e1.7", "gene_names_refseq": "hmgxb4a; si:dkeyp-69e1.7", "protein_names_uniprotkb": "HMG domain-containing protein 4a isoform X1", "protein_names_refseq": "HMG domain-containing protein 4a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:559742)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "34769390", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IV73", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2BB33-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BB35-1", "uniprot_id": [ { "id": "A0A8M2BB35_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BB35", "type": "external" } ], "mass": 34807.0, "length": 307, "protein_name": "G-protein coupled receptor 55", "gene_name": "gpr55bp", "organism": "Zebrafish", "refseq_name": "G-protein coupled receptor 55", "refseq_ac": [ { "id": "XP_005163624", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005163624", "type": "external" } ], "gene_names_uniprotkb": "gpr55bp; LOC793909", "gene_names_refseq": "LOC793909", "protein_names_uniprotkb": "G-protein coupled receptor 55", "protein_names_refseq": "G-protein coupled receptor 55", "tax_id": 7955, "disease": "", "pathway": " (dre:793909)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005163624.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HWX7", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BB35-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBC4-1", "uniprot_id": [ { "id": "A0A8M2BBC4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBC4", "type": "external" } ], "mass": 144859.0, "length": 1253, "protein_name": "Uncharacterized protein rab11fip1b isoform X1", "gene_name": "rab11fip1b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein rab11fip1b isoform X1", "refseq_ac": [ { "id": "XP_005164248", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164248", "type": "external" } ], "gene_names_uniprotkb": "rab11fip1b", "gene_names_refseq": "rab11fip1b", "protein_names_uniprotkb": "Uncharacterized protein rab11fip1b isoform X1", "protein_names_refseq": "uncharacterized protein rab11fip1b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:402861)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005164248.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding", "go_cellular_component": "GO:0055037 recycling endosome", "go_biological_process": "GO:0015031 protein transport;GO:0045055 regulated exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBC4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBD4-1", "uniprot_id": [ { "id": "A0A8M2BBD4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBD4", "type": "external" } ], "mass": 113160.0, "length": 1110, "protein_name": "Uncharacterized protein si:ch211-198m17.1 isoform X1", "gene_name": "si:ch211-198m17.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-198m17.1 isoform X1", "refseq_ac": [ { "id": "XP_005164220", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164220", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-198m17.1", "gene_names_refseq": "si:ch211-198m17.1", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-198m17.1 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch211-198m17.1 isoform X1", "tax_id": 7955, "disease": "ischemia (Disease Ontology:DOID:326)", "pathway": " (dre:100332647)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBD4-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBH1-1", "uniprot_id": [ { "id": "A0A8M2BBH1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBH1", "type": "external" } ], "mass": 48880.0, "length": 435, "protein_name": "QRFP-like peptide receptor", "gene_name": "LOC101883165", "organism": "Zebrafish", "refseq_name": "QRFP-like peptide receptor", "refseq_ac": [ { "id": "XP_005164243", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164243", "type": "external" } ], "gene_names_uniprotkb": "LOC101883165", "gene_names_refseq": "LOC101883165", "protein_names_uniprotkb": "QRFP-like peptide receptor", "protein_names_refseq": "QRFP-like peptide receptor", "tax_id": 7955, "disease": "", "pathway": " (dre:101883165)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005164243.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007218 neuropeptide signaling pathway;GO:0032870 cellular response to hormone stimulus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBH1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBI1-1", "uniprot_id": [ { "id": "A0A8M2BBI1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBI1", "type": "external" } ], "mass": 32019.0, "length": 290, "protein_name": "Ubiquitin domain-containing protein UBFD1 isoform X1", "gene_name": "ubfd1", "organism": "Zebrafish", "refseq_name": "ubiquitin domain-containing protein UBFD1 isoform X1", "refseq_ac": [ { "id": "XP_005164267", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164267", "type": "external" } ], "gene_names_uniprotkb": "ubfd1; im:6905175; zgc:162578", "gene_names_refseq": "im:6905175; ubfd1; zgc:162578", "protein_names_uniprotkb": "Ubiquitin domain-containing protein UBFD1 isoform X1", "protein_names_refseq": "ubiquitin domain-containing protein UBFD1 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBI1-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBI6-1", "uniprot_id": [ { "id": "A0A8M2BBI6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBI6", "type": "external" } ], "mass": 170585.0, "length": 1568, "protein_name": "Splicing factor, arginine/serine-rich 19 isoform X1", "gene_name": "scaf1", "organism": "Zebrafish", "refseq_name": "splicing factor, arginine/serine-rich 19 isoform X1", "refseq_ac": [ { "id": "XP_005164125", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164125", "type": "external" } ], "gene_names_uniprotkb": "scaf1", "gene_names_refseq": "scaf1", "protein_names_uniprotkb": "Splicing factor, arginine/serine-rich 19 isoform X1", "protein_names_refseq": "splicing factor, arginine/serine-rich 19 isoform X1", "tax_id": 7955, "disease": "end stage renal disease (Disease Ontology:DOID:783)", "pathway": " (dre:553490)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005164125.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0099122 RNA polymerase II C-terminal domain binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBI6-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBK0-1", "uniprot_id": [ { "id": "A0A8M2BBK0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBK0", "type": "external" } ], "mass": 48508.0, "length": 429, "protein_name": "Uncharacterized protein si:dkey-121j17.6 isoform X1", "gene_name": "si:dkey-121j17.6", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-121j17.6 isoform X1", "refseq_ac": [ { "id": "XP_005164484", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164484", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-121j17.6", "gene_names_refseq": "si:dkey-121j17.6", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-121j17.6 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-121j17.6 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886441)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005164484.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004518 nuclease activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBK0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBL4-1", "uniprot_id": [ { "id": "A0A8M2BBL4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBL4", "type": "external" } ], "mass": 97509.0, "length": 889, "protein_name": "Protein phosphatase 1 regulatory subunit 29", "gene_name": "elfn2b", "organism": "Zebrafish", "refseq_name": "protein phosphatase 1 regulatory subunit 29", "refseq_ac": [ { "id": "XP_005164143", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164143", "type": "external" } ], "gene_names_uniprotkb": "elfn2b", "gene_names_refseq": "elfn2b", "protein_names_uniprotkb": "Protein phosphatase 1 regulatory subunit 29", "protein_names_refseq": "protein phosphatase 1 regulatory subunit 29", "tax_id": 7955, "disease": "", "pathway": " (dre:796777)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBL4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBM8-1", "uniprot_id": [ { "id": "A0A8M2BBM8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBM8", "type": "external" } ], "mass": 126740.0, "length": 1146, "protein_name": "DUF6729 domain-containing protein", "gene_name": "LOC101885950", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005164418", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164418", "type": "external" } ], "gene_names_uniprotkb": "LOC101885950", "gene_names_refseq": "LOC101885950", "protein_names_uniprotkb": "DUF6729 domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101885950)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_005164418.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBM8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBN0-1", "uniprot_id": [ { "id": "A0A8M2BBN0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBN0", "type": "external" } ], "mass": 44768.0, "length": 397, "protein_name": "Ras association domain-containing protein 3 isoform X1", "gene_name": "rassf3", "organism": "Zebrafish", "refseq_name": "Ras association domain family member 3 isoform 2", "refseq_ac": [ { "id": "NP_001429177", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429177", "type": "external" } ], "gene_names_uniprotkb": "rassf3", "gene_names_refseq": "rassf3", "protein_names_uniprotkb": "Ras association domain-containing protein 3 isoform X1", "protein_names_refseq": "Ras association (RalGDS/AF-6) domain family member 3; Ras association domain family member 3 isoform 2", "tax_id": 7955, "disease": "", "pathway": " (dre:792539)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01024670.1, SRR26395017.1164636.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505372, SAMEA3505375 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Jul 30, 2025 this sequence version replaced XP_005164556.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005874 microtubule", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBN0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBN8-1", "uniprot_id": [ { "id": "A0A8M2BBN8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBN8", "type": "external" } ], "mass": 89891.0, "length": 797, "protein_name": "Protein ELFN1", "gene_name": "elfn1a", "organism": "Zebrafish", "refseq_name": "protein ELFN1", "refseq_ac": [ { "id": "XP_005164250", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164250", "type": "external" } ], "gene_names_uniprotkb": "elfn1a", "gene_names_refseq": "elfn1a", "protein_names_uniprotkb": "Protein ELFN1", "protein_names_refseq": "protein ELFN1", "tax_id": 7955, "disease": "schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:562570)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005164250.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "GO:0007268 chemical synaptic transmission", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBN8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBP5-1", "uniprot_id": [ { "id": "A0A8M2BBP5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBP5", "type": "external" } ], "mass": 128922.0, "length": 1114, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "zgc:113263", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005164569", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164569", "type": "external" } ], "gene_names_uniprotkb": "zgc:113263; zgc:113263", "gene_names_refseq": "zgc:113263", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "autosomal dominant dyskeratosis congenita 3 (Disease Ontology:DOID:0070018); Revesz syndrome (Disease Ontology:DOID:0070026); dyskeratosis congenita (Disease Ontology:DOID:2729)", "pathway": " (dre:503753)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "21311760;24926785;26469318;27189481", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005164569.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042162 telomeric DNA binding", "go_cellular_component": "GO:0070187 shelterin complex", "go_biological_process": "GO:1904356 regulation of telomere maintenance via telomere lengthening;GO:0016233 telomere capping", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M2BBP5-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBT7-1", "uniprot_id": [ { "id": "A0A8M2BBT7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBT7", "type": "external" } ], "mass": 60332.0, "length": 541, "protein_name": "Nuclear factor, interleukin 3 regulated, member 2 isoform X1", "gene_name": "nfil3-2", "organism": "Zebrafish", "refseq_name": "nuclear factor, interleukin 3 regulated, member 2 isoform X1", "refseq_ac": [ { "id": "XP_005164407", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164407", "type": "external" } ], "gene_names_uniprotkb": "nfil3-2; e4bp4-2", "gene_names_refseq": "e4bp4-2; nfil3-2", "protein_names_uniprotkb": "Nuclear factor, interleukin 3 regulated, member 2 isoform X1", "protein_names_refseq": "nuclear factor, interleukin 3 regulated, member 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBT7-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBT9-1", "uniprot_id": [ { "id": "A0A8M2BBT9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBT9", "type": "external" } ], "mass": 39030.0, "length": 350, "protein_name": "GTPase IMAP family member 7", "gene_name": "si:dkey-120c6.5", "organism": "Zebrafish", "refseq_name": "GTPase IMAP family member 7", "refseq_ac": [ { "id": "XP_005164438", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164438", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-120c6.5", "gene_names_refseq": "si:dkey-120c6.5", "protein_names_uniprotkb": "GTPase IMAP family member 7", "protein_names_refseq": "GTPase IMAP family member 7", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J3N6;A0AC58J3N8;A0AC58J3P0;X1WFE5", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBT9-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBU5-1", "uniprot_id": [ { "id": "A0A8M2BBU5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBU5", "type": "external" } ], "mass": 66612.0, "length": 600, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "plxnb2a.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005164765", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164765", "type": "external" } ], "gene_names_uniprotkb": "plxnb2a.3; si:dkey-183c2.4", "gene_names_refseq": "plxnb2a.3; si:dkey-183c2.4", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561237)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15520368;26469318;27189481;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0017154 semaphorin receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0007411 axon guidance", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M2BBU5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BBV8-1", "uniprot_id": [ { "id": "A0A8M2BBV8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BBV8", "type": "external" } ], "mass": 91116.0, "length": 802, "protein_name": "GRIP and coiled-coil domain-containing protein 1", "gene_name": "gcc1", "organism": "Zebrafish", "refseq_name": "GRIP and coiled-coil domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005164792", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164792", "type": "external" } ], "gene_names_uniprotkb": "gcc1; zgc:101007", "gene_names_refseq": "gcc1; zgc:101007", "protein_names_uniprotkb": "GRIP and coiled-coil domain-containing protein 1; Golgi coiled-coil protein 1", "protein_names_refseq": "GRIP and coiled-coil domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:445205); (R-DRE-6811440)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Probably involved in maintaining Golgi structure., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q5RGI3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0000139 Golgi membrane;GO:0005794 Golgi apparatus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BBV8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BC10-1", "uniprot_id": [ { "id": "A0A8M2BC10_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BC10", "type": "external" } ], "mass": 49126.0, "length": 443, "protein_name": "Plexin-C1-like", "gene_name": "LOC101883382", "organism": "Zebrafish", "refseq_name": "plexin-C1-like precursor", "refseq_ac": [ { "id": "NP_001429832", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429832", "type": "external" } ], "gene_names_uniprotkb": "LOC101883382", "gene_names_refseq": "LOC101883382", "protein_names_uniprotkb": "Plexin-C1-like", "protein_names_refseq": "plexin-C1-like precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:101883382)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588717.16012545.1, SRR32588718.17416259.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN02418767, SAMN06645147 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On Sep 1, 2025 this sequence version replaced XP_005164841.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0017154 semaphorin receptor activity", "go_cellular_component": "", "go_biological_process": "GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BC10-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BC35-1", "uniprot_id": [ { "id": "A0A8M2BC35_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BC35", "type": "external" } ], "mass": 96514.0, "length": 849, "protein_name": "USP6 N-terminal-like protein", "gene_name": "usp6nl", "organism": "Zebrafish", "refseq_name": "USP6 N-terminal-like protein isoform X1", "refseq_ac": [ { "id": "XP_005164934", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164934", "type": "external" } ], "gene_names_uniprotkb": "usp6nl; si:ch211-198d18.2", "gene_names_refseq": "si:ch211-198d18.2; usp6nl", "protein_names_uniprotkb": "USP6 N-terminal-like protein", "protein_names_refseq": "USP6 N-terminal-like protein isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005164934.1. COMPLETENESS: full length., [RefSeq]; Acts as a GTPase-activating protein for RAB43, RAB5A and RAB30. Involved in receptor trafficking. In complex with EPS8 inhibits internalization of EGFR. Involved in retrograde transport from the endocytic pathway to the Golgi apparatus. Involved in the transport of Shiga toxin from early and recycling endosomes to the trans-Golgi network. Required for structural integrity of the Golgi complex., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005794 Golgi apparatus;GO:0031410 cytoplasmic vesicle", "go_biological_process": "GO:0048227 plasma membrane to endosome transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BC35-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BC49-1", "uniprot_id": [ { "id": "A0A8M2BC49_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BC49", "type": "external" } ], "mass": 98961.0, "length": 893, "protein_name": "Uncharacterized protein", "gene_name": "LOC101883798", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005164843", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164843", "type": "external" } ], "gene_names_uniprotkb": "LOC101883798", "gene_names_refseq": "LOC101883798", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101883798)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BC49-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BC56-1", "uniprot_id": [ { "id": "A0A8M2BC56_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BC56", "type": "external" } ], "mass": 111776.0, "length": 953, "protein_name": "Coiled-coil domain-containing protein 146 isoform X1", "gene_name": "ccdc146", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 146 isoform X1", "refseq_ac": [ { "id": "XP_005164957", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164957", "type": "external" } ], "gene_names_uniprotkb": "ccdc146; si:ch211-276e22.2; zgc:152979", "gene_names_refseq": "ccdc146; si:ch211-276e22.2; zgc:152979", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 146 isoform X1", "protein_names_refseq": "coiled-coil domain-containing protein 146 isoform X1", "tax_id": 7955, "disease": "spermatogenic failure 94 (Disease Ontology:DOID:0070593); male infertility (Disease Ontology:DOID:12336)", "pathway": " (dre:767671)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "12477932", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J8G0;A0AC58J8G4;A0AC58J8G7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005856 cytoskeleton", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2BC56-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BC86-1", "uniprot_id": [ { "id": "A0A8M2BC86_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BC86", "type": "external" } ], "mass": 387009.0, "length": 3356, "protein_name": "Golgin subfamily B member 1 isoform X1", "gene_name": "golgb1", "organism": "Zebrafish", "refseq_name": "golgin subfamily B member 1 isoform X1", "refseq_ac": [ { "id": "XP_005164965", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164965", "type": "external" } ], "gene_names_uniprotkb": "golgb1", "gene_names_refseq": "golgb1", "protein_names_uniprotkb": "Golgin subfamily B member 1 isoform X1", "protein_names_refseq": "golgin subfamily B member 1 isoform X1", "tax_id": 7955, "disease": "hyperphosphatemic familial tumoral calcinosis (Disease Ontology:DOID:0111063); osteochondrodysplasia (Disease Ontology:DOID:2256); cleft palate (Disease Ontology:DOID:674)", "pathway": " (dre:566353)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005801 cis-Golgi network;GO:0005793 endoplasmic reticulum-Golgi intermediate compartment;GO:0005794 Golgi apparatus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BC86-1", "record_type": "protein", "filter_code": "0000000.0000111.001000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BC88-1", "uniprot_id": [ { "id": "A0A8M2BC88_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BC88", "type": "external" } ], "mass": 40928.0, "length": 342, "protein_name": "Uncharacterized protein", "gene_name": "LOC101883422", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005164961", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005164961", "type": "external" } ], "gene_names_uniprotkb": "LOC101883422", "gene_names_refseq": "LOC101883422", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101883422)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BC88-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BC93-1", "uniprot_id": [ { "id": "A0A8M2BC93_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BC93", "type": "external" } ], "mass": 37425.0, "length": 342, "protein_name": "WD repeat-containing protein 31", "gene_name": "wdr31", "organism": "Zebrafish", "refseq_name": "WD repeat-containing protein 31", "refseq_ac": [ { "id": "NP_001093507", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093507", "type": "external" } ], "gene_names_uniprotkb": "wdr31; si:ch73-266o15.4", "gene_names_refseq": "si:ch73-266o15.4; wdr31", "protein_names_uniprotkb": "WD repeat-containing protein 31", "protein_names_refseq": "WD repeat-containing protein 31", "tax_id": 7955, "disease": "", "pathway": " (dre:568862)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;37208194", "class_list": "", "function": "##Evidence-Data-START## CDS exon combination :: ERR5059480.1798621.1 [ECO:0000331] RNAseq introns :: partial sample support SAMEA3505370, SAMEA3505371 [ECO:0000350] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000005.1. On Jul 26, 2007 this sequence version replaced XP_697314.2., [RefSeq]; WDR31 displays functional redundancy with GTPase-activating proteins (GAPs) ELMOD and RP2 in regulating IFT complex and recruiting the BBSome to cilium. Publication Status: Online-Only, [RefSeq, PubMed]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JKF1;A5WV44", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0044782 cilium organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BC93-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BC98-1", "uniprot_id": [ { "id": "A0A8M2BC98_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BC98", "type": "external" } ], "mass": 26555.0, "length": 247, "protein_name": "Membrane-spanning 4-domains, subfamily A, member 17A.1", "gene_name": "ms4a17a.1", "organism": "Zebrafish", "refseq_name": "membrane-spanning 4-domains, subfamily A, member 17A.1", "refseq_ac": [ { "id": "NP_001017783", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001017783", "type": "external" } ], "gene_names_uniprotkb": "ms4a17a.1; zgc:111985", "gene_names_refseq": "ms4a17a.1; zgc:111985", "protein_names_uniprotkb": "Membrane-spanning 4-domains, subfamily A, member 17A.1", "protein_names_refseq": "membrane-spanning 4-domains, subfamily A, member 17A.1", "tax_id": 7955, "disease": "", "pathway": " (dre:550480); (R-DRE-6798695)", "pathway_count": 2, "publication_count": 3, "publication_id_list": "20186339;24683187;28982700", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC093145.1, CO804825.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC093145.1. On Sep 28, 2011 this sequence version replaced NP_001017783.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F6NRS7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BC98-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCC7-1", "uniprot_id": [ { "id": "A0A8M2BCC7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCC7", "type": "external" } ], "mass": 39277.0, "length": 351, "protein_name": "RING finger protein 215", "gene_name": "rnf215", "organism": "Zebrafish", "refseq_name": "RING finger protein 215", "refseq_ac": [ { "id": "XP_005165127", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165127", "type": "external" } ], "gene_names_uniprotkb": "rnf215", "gene_names_refseq": "rnf215", "protein_names_uniprotkb": "RING finger protein 215", "protein_names_refseq": "RING finger protein 215", "tax_id": 7955, "disease": "", "pathway": " (dre:101882431)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006511 ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCC7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCE9-1", "uniprot_id": [ { "id": "A0A8M2BCE9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCE9", "type": "external" } ], "mass": 180456.0, "length": 1642, "protein_name": "AP-4 complex accessory subunit RUSC2 isoform X1", "gene_name": "rusc2", "organism": "Zebrafish", "refseq_name": "AP-4 complex accessory subunit RUSC2 isoform X1", "refseq_ac": [ { "id": "XP_005165247", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165247", "type": "external" } ], "gene_names_uniprotkb": "rusc2", "gene_names_refseq": "rusc2", "protein_names_uniprotkb": "AP-4 complex accessory subunit RUSC2 isoform X1", "protein_names_refseq": "AP-4 complex accessory subunit RUSC2 isoform X1", "tax_id": 7955, "disease": "autosomal recessive intellectual developmental disorder 61 (Disease Ontology:DOID:0080239)", "pathway": " (dre:556081)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0031410 cytoplasmic vesicle", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCE9-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCF5-1", "uniprot_id": [ { "id": "A0A8M2BCF5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCF5", "type": "external" } ], "mass": 56152.0, "length": 527, "protein_name": "Protein FAM222A", "gene_name": "fam222aa", "organism": "Zebrafish", "refseq_name": "protein FAM222A", "refseq_ac": [ { "id": "NP_001119926", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001119926", "type": "external" } ], "gene_names_uniprotkb": "fam222aa; fam222a; im:7143836; si:dkey-175c11.1", "gene_names_refseq": "fam222aa; fam222a; im:7143836; si:dkey-175c11.1", "protein_names_uniprotkb": "Protein FAM222A", "protein_names_refseq": "family with sequence similarity 222 member A; protein FAM222A", "tax_id": 7955, "disease": "", "pathway": " (dre:793922)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588735.3059227.1, SRR32588723.1244893.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000005.1. On Jul 31, 2008 this sequence version replaced XP_001333778.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JL12;A0AC58JL16;A0AC58JL18;A0AC58JL21;A0AC58JL23;B0S6Q6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BCF5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCG4-1", "uniprot_id": [ { "id": "A0A8M2BCG4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCG4", "type": "external" } ], "mass": 28336.0, "length": 259, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-237j10.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC568721", "refseq_ac": [ { "id": "NP_001373665", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001373665", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-237j10.2", "gene_names_refseq": "si:dkey-237j10.2", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC568721", "tax_id": 7955, "disease": "", "pathway": " (dre:568721)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CF998820.1, SRR32588728.13456695.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505378, SAMEA3505386 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Jun 25, 2025 this sequence version replaced NP_001373665.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AB32TPJ1;A0AC58JKD6;A0AC58JKI7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0034121 regulation of toll-like receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2BCG4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCI6-1", "uniprot_id": [ { "id": "A0A8M2BCI6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCI6", "type": "external" } ], "mass": 204176.0, "length": 1849, "protein_name": "tRNA (32-2'-O)-methyltransferase regulator THADA isoform X1", "gene_name": "si:ch211-225b11.4", "organism": "Zebrafish", "refseq_name": "tRNA (32-2'-O)-methyltransferase regulator THADA isoform X1", "refseq_ac": [ { "id": "XP_005165257", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165257", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-225b11.4", "gene_names_refseq": "si:ch211-225b11.4", "protein_names_uniprotkb": "tRNA (32-2'-O)-methyltransferase regulator THADA isoform X1", "protein_names_refseq": "tRNA (32-2'-O)-methyltransferase regulator THADA isoform X1", "tax_id": 7955, "disease": "non-syndromic X-linked intellectual disability (Disease Ontology:DOID:0050776); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:561626)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Together with methyltransferase FTSJ1, methylates the 2'-O-ribose of nucleotides at position 32 of the anticodon loop of substrate tRNAs., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030234 enzyme regulator activity", "go_cellular_component": "", "go_biological_process": "GO:0002128 tRNA nucleoside ribose methylation;GO:0008033 tRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCI6-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCM3-1", "uniprot_id": [ { "id": "A0A8M2BCM3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCM3", "type": "external" } ], "mass": 137105.0, "length": 1259, "protein_name": "Neurite extension and migration factor", "gene_name": "nexmifa", "organism": "Zebrafish", "refseq_name": "neurite extension and migration factor", "refseq_ac": [ { "id": "XP_005165275", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165275", "type": "external" } ], "gene_names_uniprotkb": "nexmifa", "gene_names_refseq": "nexmifa", "protein_names_uniprotkb": "Neurite extension and migration factor", "protein_names_refseq": "neurite extension and migration factor", "tax_id": 7955, "disease": "", "pathway": " (dre:101882707)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005165275.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0001953 negative regulation of cell-matrix adhesion;GO:0033629 negative regulation of cell adhesion mediated by integrin;GO:2001223 negative regulation of neuron migration;GO:2000048 negative regulation of cell-cell adhesion mediated by cadherin", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCM3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCN1-1", "uniprot_id": [ { "id": "A0A8M2BCN1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCN1", "type": "external" } ], "mass": 30778.0, "length": 273, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-58f10.7", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005165393", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165393", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-58f10.7", "gene_names_refseq": "si:dkey-58f10.7", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:564114)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "25879418", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2BCN1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCN3-1", "uniprot_id": [ { "id": "A0A8M2BCN3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCN3", "type": "external" } ], "mass": 61712.0, "length": 542, "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC101884650", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005165291", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165291", "type": "external" } ], "gene_names_uniprotkb": "LOC101884650", "gene_names_refseq": "LOC101884650", "protein_names_uniprotkb": "Ig-like domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101884650)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_005165291.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0050852 T cell receptor signaling pathway;GO:0001817 regulation of cytokine production;GO:0050863 regulation of T cell activation;GO:1903037 regulation of leukocyte cell-cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCN3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCP4-1", "uniprot_id": [ { "id": "A0A8M2BCP4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCP4", "type": "external" } ], "mass": 110167.0, "length": 1013, "protein_name": "Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1", "gene_name": "nyap1", "organism": "Zebrafish", "refseq_name": "neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1", "refseq_ac": [ { "id": "XP_005165438", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165438", "type": "external" } ], "gene_names_uniprotkb": "nyap1", "gene_names_refseq": "nyap1", "protein_names_uniprotkb": "Neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1", "protein_names_refseq": "neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JLA2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0048812 neuron projection morphogenesis;GO:0043491 phosphatidylinositol 3-kinase/protein kinase B signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCP4-1", "record_type": "protein", "filter_code": "0000000.0000000.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCR4-1", "uniprot_id": [ { "id": "A0A8M2BCR4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCR4", "type": "external" } ], "mass": 25051.0, "length": 220, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101882805", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005165506", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165506", "type": "external" } ], "gene_names_uniprotkb": "LOC101882805", "gene_names_refseq": "LOC101882805", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882805)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCR4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCR7-1", "uniprot_id": [ { "id": "A0A8M2BCR7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCR7", "type": "external" } ], "mass": 46686.0, "length": 414, "protein_name": "Zinc finger protein ubi-d4 isoform X1", "gene_name": "dpf2", "organism": "Zebrafish", "refseq_name": "zinc finger protein ubi-d4 isoform X1", "refseq_ac": [ { "id": "XP_005165359", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165359", "type": "external" } ], "gene_names_uniprotkb": "dpf2; im:7146797; zgc:101789", "gene_names_refseq": "dpf2; im:7146797; zgc:101789", "protein_names_uniprotkb": "Zinc finger protein ubi-d4 isoform X1", "protein_names_refseq": "zinc finger protein ubi-d4 isoform X1", "tax_id": 7955, "disease": "Coffin-Siris syndrome 7 (Disease Ontology:DOID:0112369); alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005165359.1. 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This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005165554.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0019902 phosphatase binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCS9-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BCW4-1", "uniprot_id": [ { "id": "A0A8M2BCW4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BCW4", "type": "external" } ], "mass": 92318.0, "length": 817, "protein_name": "Mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1", "gene_name": "malt1", "organism": "Zebrafish", "refseq_name": "mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005165669", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165669", "type": "external" } ], "gene_names_uniprotkb": "malt1", "gene_names_refseq": "malt1", "protein_names_uniprotkb": "Mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1", "protein_names_refseq": "mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1", "tax_id": 7955, "disease": "lymphoma (Disease Ontology:DOID:0060058); non-Hodgkin lymphoma (Disease Ontology:DOID:0060060); immunodeficiency 12 (Disease Ontology:DOID:0111988)", "pathway": " (dre:561914)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004175 endopeptidase activity;GO:0004197 cysteine-type endopeptidase activity", "go_cellular_component": "", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BCW4-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BD28-1", "uniprot_id": [ { "id": "A0A8M2BD28_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BD28", "type": "external" } ], "mass": 43025.0, "length": 408, "protein_name": "Fidgetin", "gene_name": "LOC101884757", "organism": "Zebrafish", "refseq_name": "fidgetin", "refseq_ac": [ { "id": "XP_005165848", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165848", "type": "external" } ], "gene_names_uniprotkb": "LOC101884757", "gene_names_refseq": "LOC101884757", "protein_names_uniprotkb": "Fidgetin", "protein_names_refseq": "fidgetin", "tax_id": 7955, "disease": "", "pathway": " (dre:101884757)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BD28-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BD33-1", "uniprot_id": [ { "id": "A0A8M2BD33_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BD33", "type": "external" } ], "mass": 83171.0, "length": 783, "protein_name": "Transcription factor Sp3 isoform X1", "gene_name": "sp3b", "organism": "Zebrafish", "refseq_name": "transcription factor Sp3 isoform X1", "refseq_ac": [ { "id": "XP_005165855", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165855", "type": "external" } ], "gene_names_uniprotkb": "sp3b", "gene_names_refseq": "sp3b", "protein_names_uniprotkb": "Transcription factor Sp3 isoform X1", "protein_names_refseq": "transcription factor Sp3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:322961)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045743 positive regulation of fibroblast growth factor receptor signaling pathway;GO:0035118 embryonic pectoral fin morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BD33-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BD34-1", "uniprot_id": [ { "id": "A0A8M2BD34_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BD34", "type": "external" } ], "mass": 39873.0, "length": 358, "protein_name": "Phospholipid phosphatase-related protein type 5", "gene_name": "plppr2b", "organism": "Zebrafish", "refseq_name": "phospholipid phosphatase-related protein type 5 isoform X1", "refseq_ac": [ { "id": "XP_005165778", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005165778", "type": "external" } ], "gene_names_uniprotkb": "plppr2b", "gene_names_refseq": "plppr2b", "protein_names_uniprotkb": "Phospholipid phosphatase-related protein type 5; Lipid phosphate phosphatase-related protein type 5", "protein_names_refseq": "phospholipid phosphatase-related protein type 5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:571463)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_005165778.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008195 phosphatidate phosphatase activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0006644 phospholipid metabolic process;GO:0046839 phospholipid dephosphorylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BD34-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BD64-1", "uniprot_id": [ { "id": "A0A8M2BD64_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BD64", "type": "external" } ], "mass": 78357.0, "length": 686, "protein_name": "Serine protease FAM111A isoform X2", "gene_name": "fam111.1", "organism": "Zebrafish", "refseq_name": "family with sequence similarity 111.1", "refseq_ac": [ { "id": "NP_001427840", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001427840", "type": "external" } ], "gene_names_uniprotkb": "fam111.1; fam111.2", "gene_names_refseq": "fam111.1", "protein_names_uniprotkb": "Serine protease FAM111A isoform X2", "protein_names_refseq": "family with sequence similarity 111.1", "tax_id": 7955, "disease": "Kenny-Caffey syndrome type 2 (Disease Ontology:DOID:0080723)", "pathway": " (dre:101886961)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008236 serine-type peptidase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0000785 chromatin", "go_biological_process": "GO:0006508 proteolysis;GO:0031297 replication fork processing;GO:0106300 protein-DNA covalent cross-linking repair", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BD64-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BDH1-1", "uniprot_id": [ { "id": "A0A8M2BDH1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BDH1", "type": "external" } ], "mass": 164324.0, "length": 1448, "protein_name": "Uncharacterized protein rbm6 isoform X1", "gene_name": "rbm6", "organism": "Zebrafish", "refseq_name": "uncharacterized protein rbm6 isoform X1", "refseq_ac": [ { "id": "XP_005166176", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166176", "type": "external" } ], "gene_names_uniprotkb": "rbm6", "gene_names_refseq": "rbm6", "protein_names_uniprotkb": "Uncharacterized protein rbm6 isoform X1", "protein_names_refseq": "uncharacterized protein rbm6 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:567058)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_005166176.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000398 mRNA splicing, via spliceosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BDH1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BDI7-1", "uniprot_id": [ { "id": "A0A8M2BDI7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BDI7", "type": "external" } ], "mass": 25619.0, "length": 228, "protein_name": "RING finger protein 223", "gene_name": "LOC101882926", "organism": "Zebrafish", "refseq_name": "RING finger protein 223", "refseq_ac": [ { "id": "XP_005166189", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166189", "type": "external" } ], "gene_names_uniprotkb": "LOC101882926", "gene_names_refseq": "LOC101882926", "protein_names_uniprotkb": "RING finger protein 223", "protein_names_refseq": "RING finger protein 223", "tax_id": 7955, "disease": "", "pathway": " (dre:101882926)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "", "go_biological_process": "GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BDI7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BDI8-1", "uniprot_id": [ { "id": "A0A8M2BDI8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BDI8", "type": "external" } ], "mass": 70308.0, "length": 622, "protein_name": "Nuclear receptor coactivator 5 isoform X1", "gene_name": "ncoa5", "organism": "Zebrafish", "refseq_name": "nuclear receptor coactivator 5 isoform X1", "refseq_ac": [ { "id": "XP_005166217", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166217", "type": "external" } ], "gene_names_uniprotkb": "ncoa5; zgc:92194", "gene_names_refseq": "ncoa5; zgc:92194", "protein_names_uniprotkb": "Nuclear receptor coactivator 5 isoform X1", "protein_names_refseq": "nuclear receptor coactivator 5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:447849)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005654 nucleoplasm", "go_biological_process": "GO:0009966 regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BDI8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BDK6-1", "uniprot_id": [ { "id": "A0A8M2BDK6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BDK6", "type": "external" } ], "mass": 245477.0, "length": 2185, "protein_name": "Obscurin-like protein 1a isoform X1", "gene_name": "obsl1a", "organism": "Zebrafish", "refseq_name": "obscurin-like protein 1a isoform X1", "refseq_ac": [ { "id": "XP_005166286", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166286", "type": "external" } ], "gene_names_uniprotkb": "obsl1a; si:dkey-91f15.5", "gene_names_refseq": "obsl1a; si:dkey-91f15.5", "protein_names_uniprotkb": "Obscurin-like protein 1a isoform X1", "protein_names_refseq": "obscurin-like protein 1a isoform X1", "tax_id": 7955, "disease": "3-M syndrome (Disease Ontology:DOID:0060241)", "pathway": " (dre:796577)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "17289344;27189481;30532148", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004687 myosin light chain kinase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BDK6-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BDP2-1", "uniprot_id": [ { "id": "A0A8M2BDP2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BDP2", "type": "external" } ], "mass": 70682.0, "length": 617, "protein_name": "Crestin", "gene_name": "LOC799796", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005166254", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166254", "type": "external" } ], "gene_names_uniprotkb": "LOC799796", "gene_names_refseq": "LOC799796", "protein_names_uniprotkb": "Crestin", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:799796)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BDP2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BDY8-1", "uniprot_id": [ { "id": "A0A8M2BDY8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BDY8", "type": "external" } ], "mass": 97828.0, "length": 879, "protein_name": "Zinc finger protein 280C isoform X1", "gene_name": "znf280d", "organism": "Zebrafish", "refseq_name": "zinc finger protein 280C isoform X1", "refseq_ac": [ { "id": "XP_005166581", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166581", "type": "external" } ], "gene_names_uniprotkb": "znf280d", "gene_names_refseq": "znf280d", "protein_names_uniprotkb": "Zinc finger protein 280C isoform X1", "protein_names_refseq": "zinc finger protein 280C isoform X1", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); intellectual disability (Disease Ontology:DOID:1059)", "pathway": " (dre:556610)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005166581.1. COMPLETENESS: full length., [RefSeq]; May function as a transcription factor., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BDY8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BE40-1", "uniprot_id": [ { "id": "A0A8M2BE40_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BE40", "type": "external" } ], "mass": 70801.0, "length": 625, "protein_name": "Adhesion G-protein coupled receptor G5 isoform X1", "gene_name": "LOC101882631", "organism": "Zebrafish", "refseq_name": "adhesion G-protein coupled receptor G5 isoform X1", "refseq_ac": [ { "id": "XP_005166671", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166671", "type": "external" } ], "gene_names_uniprotkb": "LOC101882631", "gene_names_refseq": "LOC101882631", "protein_names_uniprotkb": "Adhesion G-protein coupled receptor G5 isoform X1", "protein_names_refseq": "adhesion G-protein coupled receptor G5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882631)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_005166671.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007166 cell surface receptor signaling pathway;GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BE40-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BE44-1", "uniprot_id": [ { "id": "A0A8M2BE44_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BE44", "type": "external" } ], "mass": 214234.0, "length": 1943, "protein_name": "DENN domain-containing protein 4C isoform X1", "gene_name": "dennd4c", "organism": "Zebrafish", "refseq_name": "DENN domain-containing protein 4C isoform X1", "refseq_ac": [ { "id": "XP_005166610", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166610", "type": "external" } ], "gene_names_uniprotkb": "dennd4c", "gene_names_refseq": "dennd4c", "protein_names_uniprotkb": "DENN domain-containing protein 4C isoform X1", "protein_names_refseq": "DENN domain-containing protein 4C isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:558626)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0031410 cytoplasmic vesicle;GO:0000813 ESCRT I complex", "go_biological_process": "GO:0032483 regulation of Rab protein signal transduction;GO:0032869 cellular response to insulin stimulus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BE44-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BE55-1", "uniprot_id": [ { "id": "A0A8M2BE55_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BE55", "type": "external" } ], "mass": 40102.0, "length": 354, "protein_name": "GRAM domain-containing protein 2A isoform X1", "gene_name": "gramd2aa", "organism": "Zebrafish", "refseq_name": "GRAM domain-containing protein 2A isoform X1", "refseq_ac": [ { "id": "XP_005166658", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166658", "type": "external" } ], "gene_names_uniprotkb": "gramd2aa", "gene_names_refseq": "gramd2aa", "protein_names_uniprotkb": "GRAM domain-containing protein 2A isoform X1", "protein_names_refseq": "GRAM domain-containing protein 2A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555179)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005546 phosphatidylinositol-4,5-bisphosphate binding", "go_cellular_component": "GO:0044232 organelle membrane contact site;GO:0005789 endoplasmic reticulum membrane;GO:0005737 cytoplasm", "go_biological_process": "GO:2001256 regulation of store-operated calcium entry;GO:0061817 endoplasmic reticulum-plasma membrane tethering", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BE55-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BE57-1", "uniprot_id": [ { "id": "A0A8M2BE57_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BE57", "type": "external" } ], "mass": 48413.0, "length": 435, "protein_name": "Ankyrin repeat and SOCS box protein 6 isoform X1", "gene_name": "asb6", "organism": "Zebrafish", "refseq_name": "ankyrin repeat and SOCS box protein 6 isoform X1", "refseq_ac": [ { "id": "XP_005166750", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166750", "type": "external" } ], "gene_names_uniprotkb": "asb6; zgc:110231", "gene_names_refseq": "asb6; zgc:110231", "protein_names_uniprotkb": "Ankyrin repeat and SOCS box protein 6 isoform X1", "protein_names_refseq": "ankyrin repeat and SOCS box protein 6 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:553600)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M2BE50;A0AC58G777;A0AC58G783;B0R1B6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BE57-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BE82-1", "uniprot_id": [ { "id": "A0A8M2BE82_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BE82", "type": "external" } ], "mass": 60075.0, "length": 538, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "mier3b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005166936", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166936", "type": "external" } ], "gene_names_uniprotkb": "mier3b; zgc:162295", "gene_names_refseq": "mier3b; zgc:162295", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "breast cancer (Disease Ontology:DOID:1612); invasive ductal carcinoma (Disease Ontology:DOID:3008); lung non-small cell carcinoma (Disease Ontology:DOID:3908); lung adenocarcinoma (Disease Ontology:DOID:3910)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity;GO:0042826 histone deacetylase binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0032991 protein-containing complex", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BE82-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BE85-1", "uniprot_id": [ { "id": "A0A8M2BE85_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BE85", "type": "external" } ], "mass": 27905.0, "length": 253, "protein_name": "Somatomedin-B and thrombospondin type-1 domain-containing protein isoform X1", "gene_name": "si:dkey-178e17.3", "organism": "Zebrafish", "refseq_name": "somatomedin-B and thrombospondin type-1 domain-containing protein isoform X1", "refseq_ac": [ { "id": "XP_005166797", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166797", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-178e17.3", "gene_names_refseq": "si:dkey-178e17.3", "protein_names_uniprotkb": "Somatomedin-B and thrombospondin type-1 domain-containing protein isoform X1", "protein_names_refseq": "somatomedin-B and thrombospondin type-1 domain-containing protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100535682)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005166797.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BE85-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEE8-1", "uniprot_id": [ { "id": "A0A8M2BEE8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEE8", "type": "external" } ], "mass": 52003.0, "length": 464, "protein_name": "Fibrinogen C domain-containing protein 1 isoform X1", "gene_name": "fibcd1a", "organism": "Zebrafish", "refseq_name": "fibrinogen C domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005166963", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166963", "type": "external" } ], "gene_names_uniprotkb": "fibcd1a", "gene_names_refseq": "fibcd1a", "protein_names_uniprotkb": "Fibrinogen C domain-containing protein 1 isoform X1", "protein_names_refseq": "fibrinogen C domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100151577)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0008061 chitin binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane;GO:0031012 extracellular matrix", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BEE8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEI4-1", "uniprot_id": [ { "id": "A0A8M2BEI4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEI4", "type": "external" } ], "mass": 170001.0, "length": 1534, "protein_name": "Zinc finger protein 335 isoform X1", "gene_name": "znf335", "organism": "Zebrafish", "refseq_name": "zinc finger protein 335 isoform X1", "refseq_ac": [ { "id": "XP_005167155", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167155", "type": "external" } ], "gene_names_uniprotkb": "znf335", "gene_names_refseq": "znf335", "protein_names_uniprotkb": "Zinc finger protein 335 isoform X1", "protein_names_refseq": "zinc finger protein 335 isoform X1", "tax_id": 7955, "disease": "primary autosomal recessive microcephaly 10 (Disease Ontology:DOID:0070294)", "pathway": " (dre:100148891)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8RSH0", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0007420 brain development;GO:0040029 epigenetic regulation of gene expression;GO:0050769 positive regulation of neurogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BEI4-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEK5-1", "uniprot_id": [ { "id": "A0A8M2BEK5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEK5", "type": "external" } ], "mass": 16419.0, "length": 147, "protein_name": "Uncharacterized protein C22orf15 homolog", "gene_name": "c8h22orf15", "organism": "Zebrafish", "refseq_name": "uncharacterized protein C22orf15 homolog", "refseq_ac": [ { "id": "XP_005167243", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167243", "type": "external" } ], "gene_names_uniprotkb": "c8h22orf15", "gene_names_refseq": "c8h22orf15", "protein_names_uniprotkb": "Uncharacterized protein C22orf15 homolog", "protein_names_refseq": "uncharacterized protein C22orf15 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:101886360)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BEK5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEK8-1", "uniprot_id": [ { "id": "A0A8M2BEK8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEK8", "type": "external" } ], "mass": 12142.0, "length": 106, "protein_name": "Zinc finger X-chromosomal protein-like", "gene_name": "LOC137490316", "organism": "Zebrafish", "refseq_name": "zinc finger X-chromosomal protein-like", "refseq_ac": [ { "id": "XP_005167194", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167194", "type": "external" } ], "gene_names_uniprotkb": "LOC137490316", "gene_names_refseq": "LOC137490316", "protein_names_uniprotkb": "Zinc finger X-chromosomal protein-like", "protein_names_refseq": "zinc finger X-chromosomal protein-like", "tax_id": 7955, "disease": "", "pathway": " (dre:137490316)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_005167194.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BEK8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEK9-1", "uniprot_id": [ { "id": "A0A8M2BEK9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEK9", "type": "external" } ], "mass": 109920.0, "length": 1047, "protein_name": "Ubiquitin-associated protein 2b isoform X1", "gene_name": "ubap2b", "organism": "Zebrafish", "refseq_name": "ubiquitin-associated protein 2b isoform X1", "refseq_ac": [ { "id": "XP_005167328", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167328", "type": "external" } ], "gene_names_uniprotkb": "ubap2b; wu:fb19h07; zgc:158399", "gene_names_refseq": "ubap2b; wu:fb19h07; zgc:158399", "protein_names_uniprotkb": "Ubiquitin-associated protein 2b isoform X1", "protein_names_refseq": "ubiquitin-associated protein 2b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G7Y7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005694 chromosome", "go_biological_process": "GO:0061484 hematopoietic stem cell homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BEK9-1", "record_type": "protein", "filter_code": "0000000.0000000.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEP1-1", "uniprot_id": [ { "id": "A0A8M2BEP1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEP1", "type": "external" } ], "mass": 38254.0, "length": 343, "protein_name": "Glycosyltransferase 1 domain-containing protein 1", "gene_name": "glt1d1", "organism": "Zebrafish", "refseq_name": "glycosyltransferase 1 domain-containing protein 1", "refseq_ac": [ { "id": "XP_005167303", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167303", "type": "external" } ], "gene_names_uniprotkb": "glt1d1", "gene_names_refseq": "glt1d1", "protein_names_uniprotkb": "Glycosyltransferase 1 domain-containing protein 1", "protein_names_refseq": "glycosyltransferase 1 domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884717)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_005167303.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016757 glycosyltransferase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BEP1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEP5-1", "uniprot_id": [ { "id": "A0A8M2BEP5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEP5", "type": "external" } ], "mass": 38902.0, "length": 344, "protein_name": "Probable G-protein coupled receptor 160", "gene_name": "si:dkeyp-100a1.6", "organism": "Zebrafish", "refseq_name": "probable G-protein coupled receptor 160", "refseq_ac": [ { "id": "XP_005167344", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167344", "type": "external" } ], "gene_names_uniprotkb": "si:dkeyp-100a1.6", "gene_names_refseq": "si:dkeyp-100a1.6", "protein_names_uniprotkb": "Probable G-protein coupled receptor 160", "protein_names_refseq": "probable G-protein coupled receptor 160", "tax_id": 7955, "disease": "", "pathway": " (dre:100321230)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0043235 receptor complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BEP5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEQ4-1", "uniprot_id": [ { "id": "A0A8M2BEQ4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEQ4", "type": "external" } ], "mass": 75870.0, "length": 662, "protein_name": "Rho guanine nucleotide exchange factor 16 isoform X1", "gene_name": "arhgef16", "organism": "Zebrafish", "refseq_name": "rho guanine nucleotide exchange factor 16 isoform 1", "refseq_ac": [ { "id": "NP_001116755", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001116755", "type": "external" } ], "gene_names_uniprotkb": "arhgef16; si:dkeyp-100a1.3", "gene_names_refseq": "arhgef16; si:dkeyp-100a1.3", "protein_names_uniprotkb": "Rho guanine nucleotide exchange factor 16 isoform X1", "protein_names_refseq": "rho guanine nucleotide exchange factor 16 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:567180)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "23588205;26469318;27806254;29129556", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395039.954133.1, SRR32588728.44000220.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On or before Aug 5, 2025 this sequence version replaced XP_005167338.1, NP_001116755.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0042995 cell projection", "go_biological_process": "GO:0032956 regulation of actin cytoskeleton organization;GO:0032489 regulation of Cdc42 protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M2BEQ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BES4-1", "uniprot_id": [ { "id": "A0A8M2BES4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BES4", "type": "external" } ], "mass": 59265.0, "length": 544, "protein_name": "Syntaphilin isoform X1", "gene_name": "snpha", "organism": "Zebrafish", "refseq_name": "syntaphilin isoform X1", "refseq_ac": [ { "id": "XP_005167383", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167383", "type": "external" } ], "gene_names_uniprotkb": "snpha", "gene_names_refseq": "snpha", "protein_names_uniprotkb": "Syntaphilin isoform X1", "protein_names_refseq": "syntaphilin isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882811)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:0016020 membrane;GO:0005881 cytoplasmic microtubule", "go_biological_process": "GO:0030182 neuron differentiation;GO:0051659 maintenance of mitochondrion location", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BES4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BES5-1", "uniprot_id": [ { "id": "A0A8M2BES5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BES5", "type": "external" } ], "mass": 42906.0, "length": 388, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-4e7.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005167497", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167497", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-4e7.3", "gene_names_refseq": "si:dkey-4e7.3", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:402865)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2BES5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEX4-1", "uniprot_id": [ { "id": "A0A8M2BEX4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEX4", "type": "external" } ], "mass": 56053.0, "length": 509, "protein_name": "Uncharacterized protein si:ch211-67e16.4 isoform X1", "gene_name": "si:ch211-67e16.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-67e16.4 isoform X1", "refseq_ac": [ { "id": "XP_005167570", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167570", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-67e16.4", "gene_names_refseq": "si:ch211-67e16.4", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-67e16.4 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch211-67e16.4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:558404)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005167570.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BEX4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PYH7-1", "uniprot_id": [ { "id": "A0A8M9PYH7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PYH7", "type": "external" } ], "mass": 177738.0, "length": 1554, "protein_name": "Girdin isoform X1", "gene_name": "ccdc88aa", "organism": "Zebrafish", "refseq_name": "girdin isoform X1", "refseq_ac": [ { "id": "XP_021327376", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327376", "type": "external" } ], "gene_names_uniprotkb": "ccdc88aa", "gene_names_refseq": "ccdc88aa", "protein_names_uniprotkb": "Girdin isoform X1", "protein_names_refseq": "girdin isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100329473)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327376.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction;GO:0030705 cytoskeleton-dependent intracellular transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PYH7-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q2T4-1", "uniprot_id": [ { "id": "A0A8M9Q2T4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q2T4", "type": "external" } ], "mass": 77190.0, "length": 701, "protein_name": "Protein CBFA2T3 isoform X1", "gene_name": "cbfa2t3", "organism": "Zebrafish", "refseq_name": "protein CBFA2T3 isoform X1", "refseq_ac": [ { "id": "XP_021333653", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021333653", "type": "external" } ], "gene_names_uniprotkb": "cbfa2t3", "gene_names_refseq": "cbfa2t3", "protein_names_uniprotkb": "Protein CBFA2T3 isoform X1", "protein_names_refseq": "protein CBFA2T3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:563252)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021333653.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q2T4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q2W3-1", "uniprot_id": [ { "id": "A0A8M9Q2W3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q2W3", "type": "external" } ], "mass": 120603.0, "length": 1084, "protein_name": "Centrosomal protein of 126 kDa isoform X1", "gene_name": "cep126", "organism": "Zebrafish", "refseq_name": "centrosomal protein of 126 kDa isoform X1", "refseq_ac": [ { "id": "XP_073786115", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073786115", "type": "external" } ], "gene_names_uniprotkb": "cep126", "gene_names_refseq": "cep126", "protein_names_uniprotkb": "Centrosomal protein of 126 kDa isoform X1", "protein_names_refseq": "centrosomal protein of 126 kDa isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561486)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HVU7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005813 centrosome;GO:0097546 ciliary base", "go_biological_process": "GO:1905515 non-motile cilium assembly;GO:0007052 mitotic spindle organization;GO:0031122 cytoplasmic microtubule organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q2W3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PZH2-1", "uniprot_id": [ { "id": "A0A8M9PZH2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PZH2", "type": "external" } ], "mass": 52992.0, "length": 475, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "LOC796922", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase pim-1-like", "refseq_ac": [ { "id": "XP_021327756", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327756", "type": "external" } ], "gene_names_uniprotkb": "LOC796922", "gene_names_refseq": "LOC796922", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase pim-1-like", "tax_id": 7955, "disease": "", "pathway": " (dre:796922)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327756.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "2.7.11.13", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.13", "type": "external" }, { "id": "2.7.11.25", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.25", "type": "external" }, { "id": "2.7.10.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.1", "type": "external" }, { "id": "2.7.11.22", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.22", "type": "external" }, { "id": "2.7.11.21", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.21", "type": "external" }, { "id": "2.7.11.17", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.17", "type": "external" }, { "id": "2.7.12.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.1", "type": "external" }, { "id": "2.7.12.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.12.2", "type": "external" }, { "id": "2.7.11.24", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.24", "type": "external" }, { "id": "2.7.10.2", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.10.2", "type": "external" }, { "id": "2.7.11.23", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.23", "type": "external" }, { "id": "2.7.1.150", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.150", "type": "external" }, { "id": "2.7.11.12", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.12", "type": "external" }, { "id": "2.7.11.39", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.39", "type": "external" }, { "id": "2.7.11.11", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.11", "type": "external" }, { "id": "2.7.1.153", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.153", "type": "external" }, { "id": "2.7.1.137", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.137", "type": "external" }, { "id": "2.7.1.154", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.1.154", "type": "external" }, { "id": "2.7.11.26", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.26", "type": "external" }, { "id": "2.7.11.31", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.31", "type": "external" } ], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PZH2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q0F5-1", "uniprot_id": [ { "id": "A0A8M9Q0F5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q0F5", "type": "external" } ], "mass": 54855.0, "length": 481, "protein_name": "Uncharacterized protein znf648", "gene_name": "znf648", "organism": "Zebrafish", "refseq_name": "uncharacterized protein znf648", "refseq_ac": [ { "id": "XP_073810185", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073810185", "type": "external" } ], "gene_names_uniprotkb": "znf648", "gene_names_refseq": "znf648", "protein_names_uniprotkb": "Uncharacterized protein znf648", "protein_names_refseq": "uncharacterized protein znf648", "tax_id": 7955, "disease": "", "pathway": " (dre:101886793)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JUL2;E7FED1", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q0F5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9Q1N9-1", "uniprot_id": [ { "id": "A0A8M9Q1N9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9Q1N9", "type": "external" } ], "mass": 13946.0, "length": 125, "protein_name": "C-X-C motif chemokine 13", "gene_name": "cxcl13", "organism": "Zebrafish", "refseq_name": "C-X-C motif chemokine 13", "refseq_ac": [ { "id": "XP_021327320", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021327320", "type": "external" } ], "gene_names_uniprotkb": "cxcl13", "gene_names_refseq": "cxcl13", "protein_names_uniprotkb": "C-X-C motif chemokine 13", "protein_names_refseq": "C-X-C motif chemokine 13", "tax_id": 7955, "disease": "", "pathway": " (dre:101886937)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021327320.1. COMPLETENESS: full length., [RefSeq]; Ligand for cxcr3.2. Chemotactic for macrophages., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042056 chemoattractant activity;GO:0008009 chemokine activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006952 defense response;GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9Q1N9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQW0-1", "uniprot_id": [ { "id": "A0A8M3AQW0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQW0", "type": "external" } ], "mass": 127247.0, "length": 1143, "protein_name": "MHC class II transactivator isoform X1", "gene_name": "ciita", "organism": "Zebrafish", "refseq_name": "MHC class II transactivator isoform X1", "refseq_ac": [ { "id": "XP_009297712", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297712", "type": "external" } ], "gene_names_uniprotkb": "ciita", "gene_names_refseq": "ciita", "protein_names_uniprotkb": "MHC class II transactivator isoform X1", "protein_names_refseq": "MHC class II transactivator isoform X1", "tax_id": 7955, "disease": "osteoporosis (Disease Ontology:DOID:11476); Addison's disease (Disease Ontology:DOID:13774); multiple sclerosis (Disease Ontology:DOID:2377); MHC class II deficiency (Disease Ontology:DOID:5812); myocardial infarction (Disease Ontology:DOID:5844); systemic juvenile rheumatoid arthritis (Disease Ontology:DOID:676); rheumatoid arthritis (Disease Ontology:DOID:7148); periapical periodontitis (Disease Ontology:DOID:823); systemic lupus erythematosus (Disease Ontology:DOID:9074)", "pathway": " (dre:100003537)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 9, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0045345 positive regulation of MHC class I biosynthetic process;GO:0045348 positive regulation of MHC class II biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQW0-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BEX9-1", "uniprot_id": [ { "id": "A0A8M2BEX9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BEX9", "type": "external" } ], "mass": 123849.0, "length": 1148, "protein_name": "Uncharacterized protein cracdla isoform X1", "gene_name": "cracdla", "organism": "Zebrafish", "refseq_name": "uncharacterized protein cracdla isoform X1", "refseq_ac": [ { "id": "XP_005167503", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167503", "type": "external" } ], "gene_names_uniprotkb": "cracdla", "gene_names_refseq": "cracdla", "protein_names_uniprotkb": "Uncharacterized protein cracdla isoform X1", "protein_names_refseq": "uncharacterized protein cracdla isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883152)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GFR4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BEX9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BF59-1", "uniprot_id": [ { "id": "A0A8M2BF59_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BF59", "type": "external" } ], "mass": 93857.0, "length": 837, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "ralgdsa", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC799483 isoform 1", "refseq_ac": [ { "id": "NP_001429469", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429469", "type": "external" } ], "gene_names_uniprotkb": "ralgdsa; ralgds; si:ch211-251j10.3", "gene_names_refseq": "ralgdsa; ralgds; si:ch211-251j10.3", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC799483 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:799483)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26161877;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01010370.1, SRR32588715.2745457.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1. On Aug 12, 2025 this sequence version replaced XP_005167239.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007265 Ras protein signal transduction;GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BF59-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BF94-1", "uniprot_id": [ { "id": "A0A8M2BF94_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BF94", "type": "external" } ], "mass": 78255.0, "length": 709, "protein_name": "Sodium/myo-inositol cotransporter", "gene_name": "slc5a3b", "organism": "Zebrafish", "refseq_name": "sodium/myo-inositol cotransporter", "refseq_ac": [ { "id": "XP_005167848", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167848", "type": "external" } ], "gene_names_uniprotkb": "slc5a3b", "gene_names_refseq": "slc5a3b", "protein_names_uniprotkb": "Sodium/myo-inositol cotransporter; Sodium/myo-inositol transporter 1; Solute carrier family 5 member 3", "protein_names_refseq": "sodium/myo-inositol cotransporter", "tax_id": 7955, "disease": "", "pathway": " (dre:568338)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005367 myo-inositol:sodium symporter activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016323 basolateral plasma membrane;GO:0016324 apical plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BF94-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BF96-1", "uniprot_id": [ { "id": "A0A8M2BF96_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BF96", "type": "external" } ], "mass": 33005.0, "length": 277, "protein_name": "Cytokine receptor-like factor 2 isoform X1", "gene_name": "crlf2", "organism": "Zebrafish", "refseq_name": "cytokine receptor-like factor 2 isoform X1", "refseq_ac": [ { "id": "XP_005167863", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167863", "type": "external" } ], "gene_names_uniprotkb": "crlf2; tslpr", "gene_names_refseq": "crlf2; tslpr", "protein_names_uniprotkb": "Cytokine receptor-like factor 2 isoform X1", "protein_names_refseq": "cytokine receptor-like factor 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BF96-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFI1-1", "uniprot_id": [ { "id": "A0A8M2BFI1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFI1", "type": "external" } ], "mass": 58458.0, "length": 519, "protein_name": "Uncharacterized protein", "gene_name": "LOC100332698", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005168169", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168169", "type": "external" } ], "gene_names_uniprotkb": "LOC100332698", "gene_names_refseq": "LOC100332698", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:100332698)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_005168169.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BFI1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFI5-1", "uniprot_id": [ { "id": "A0A8M2BFI5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFI5", "type": "external" } ], "mass": 23666.0, "length": 205, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "zgc:153383", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005168149", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168149", "type": "external" } ], "gene_names_uniprotkb": "zgc:153383; zgc:153383", "gene_names_refseq": "zgc:153383", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:751751)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27189481;38767059;39331042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BFI5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFK3-1", "uniprot_id": [ { "id": "A0A8M2BFK3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFK3", "type": "external" } ], "mass": 32277.0, "length": 274, "protein_name": "Uncharacterized protein zgc:158517", "gene_name": "zgc:158517", "organism": "Zebrafish", "refseq_name": "uncharacterized protein zgc:158517", "refseq_ac": [ { "id": "XP_005168294", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168294", "type": "external" } ], "gene_names_uniprotkb": "zgc:158517", "gene_names_refseq": "zgc:158517", "protein_names_uniprotkb": "Uncharacterized protein zgc:158517", "protein_names_refseq": "uncharacterized protein zgc:158517", "tax_id": 7955, "disease": "", "pathway": " (dre:798338)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005168294.1. COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BFK3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFL5-1", "uniprot_id": [ { "id": "A0A8M2BFL5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFL5", "type": "external" } ], "mass": 17778.0, "length": 173, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "zgc:153675", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005168333", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168333", "type": "external" } ], "gene_names_uniprotkb": "zgc:153675", "gene_names_refseq": "zgc:153675", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005168333.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BFL5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFM4-1", "uniprot_id": [ { "id": "A0A8M2BFM4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFM4", "type": "external" } ], "mass": 38912.0, "length": 348, "protein_name": "Junctional adhesion molecule A", "gene_name": "cd2", "organism": "Zebrafish", "refseq_name": "junctional adhesion molecule A", "refseq_ac": [ { "id": "XP_005168366", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168366", "type": "external" } ], "gene_names_uniprotkb": "cd2", "gene_names_refseq": "cd2", "protein_names_uniprotkb": "Junctional adhesion molecule A", "protein_names_refseq": "junctional adhesion molecule A", "tax_id": 7955, "disease": "", "pathway": " (dre:101884448)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BFM4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFM6-1", "uniprot_id": [ { "id": "A0A8M2BFM6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFM6", "type": "external" } ], "mass": 124449.0, "length": 1121, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "arhgef49", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005167625", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167625", "type": "external" } ], "gene_names_uniprotkb": "arhgef49; si:ch211-168m7.1; si:dkey-91i10.2", "gene_names_refseq": "arhgef49; si:ch211-168m7.1; si:dkey-91i10.2", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555224)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GE88", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0035025 positive regulation of Rho protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BFM6-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFN6-1", "uniprot_id": [ { "id": "A0A8M2BFN6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFN6", "type": "external" } ], "mass": 56067.0, "length": 507, "protein_name": "Uncharacterized protein zmp:0000001333", "gene_name": "zmp:0000001333", "organism": "Zebrafish", "refseq_name": "uncharacterized protein zmp:0000001333", "refseq_ac": [ { "id": "XP_005167670", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167670", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000001333", "gene_names_refseq": "zmp:0000001333", "protein_names_uniprotkb": "Uncharacterized protein zmp:0000001333", "protein_names_refseq": "uncharacterized protein zmp:0000001333", "tax_id": 7955, "disease": "", "pathway": " (dre:101884374)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8PWU5", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BFN6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFN8-1", "uniprot_id": [ { "id": "A0A8M2BFN8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFN8", "type": "external" } ], "mass": 142664.0, "length": 1276, "protein_name": "TBC1 domain family member 4", "gene_name": "tbc1d1", "organism": "Zebrafish", "refseq_name": "TBC1 domain family member 1 isoform X1", "refseq_ac": [ { "id": "XP_005168426", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168426", "type": "external" } ], "gene_names_uniprotkb": "tbc1d1", "gene_names_refseq": "tbc1d1", "protein_names_uniprotkb": "TBC1 domain family member 4; Akt substrate of 160 kDa", "protein_names_refseq": "TBC1 domain family member 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561193)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005168426.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0032869 cellular response to insulin stimulus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BFN8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFU3-1", "uniprot_id": [ { "id": "A0A8M2BFU3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFU3", "type": "external" } ], "mass": 78656.0, "length": 705, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC141376470", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005168586", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168586", "type": "external" } ], "gene_names_uniprotkb": "LOC141376470; zgc:112970", "gene_names_refseq": "zgc:112970", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005168586.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GNK0", "ec_number_list": [], "go_molecular_function": "GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BFU3-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFV7-1", "uniprot_id": [ { "id": "A0A8M2BFV7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFV7", "type": "external" } ], "mass": 98687.0, "length": 890, "protein_name": "Uncharacterized protein", "gene_name": "LOC101886761", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005168629", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168629", "type": "external" } ], "gene_names_uniprotkb": "LOC101886761", "gene_names_refseq": "LOC101886761", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101886761)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_005168629.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BFV7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFV8-1", "uniprot_id": [ { "id": "A0A8M2BFV8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFV8", "type": "external" } ], "mass": 12128.0, "length": 106, "protein_name": "Cystatin-A-like", "gene_name": "LOC101886910", "organism": "Zebrafish", "refseq_name": "cystatin-A-like", "refseq_ac": [ { "id": "XP_005168661", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168661", "type": "external" } ], "gene_names_uniprotkb": "LOC101886910", "gene_names_refseq": "LOC101886910", "protein_names_uniprotkb": "Cystatin-A-like", "protein_names_refseq": "cystatin-A-like", "tax_id": 7955, "disease": "", "pathway": " (dre:101886910)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_005168661.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004869 cysteine-type endopeptidase inhibitor activity", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BFV8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BFY9-1", "uniprot_id": [ { "id": "A0A8M2BFY9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BFY9", "type": "external" } ], "mass": 26769.0, "length": 233, "protein_name": "Coiled-coil-helix-coiled-coil-helix domain containing 6b isoform X1", "gene_name": "chchd6b", "organism": "Zebrafish", "refseq_name": "coiled-coil-helix-coiled-coil-helix domain containing 6b isoform X1", "refseq_ac": [ { "id": "XP_005168759", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168759", "type": "external" } ], "gene_names_uniprotkb": "chchd6b; zgc:103414", "gene_names_refseq": "chchd6b; zgc:103414", "protein_names_uniprotkb": "Coiled-coil-helix-coiled-coil-helix domain containing 6b isoform X1", "protein_names_refseq": "coiled-coil-helix-coiled-coil-helix domain containing 6b isoform X1", "tax_id": 7955, "disease": "hypoplastic left heart syndrome (Disease Ontology:DOID:9955)", "pathway": "", "pathway_count": 0, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0061617 MICOS complex", "go_biological_process": "GO:0007007 inner mitochondrial membrane organization", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BFY9-1", "record_type": "protein", "filter_code": "0000000.0000110.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BG04-1", "uniprot_id": [ { "id": "A0A8M2BG04_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BG04", "type": "external" } ], "mass": 58372.0, "length": 524, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "fi17d03; wu:fi17d03", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005167974", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005167974", "type": "external" } ], "gene_names_uniprotkb": "fi17d03; wu:fi17d03; fi17d03; wu:fi17d03; zgc:66484", "gene_names_refseq": "fi17d03; wu:fi17d03; zgc:66484", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046592 polyamine oxidase activity;GO:0016491 oxidoreductase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BG04-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BG05-1", "uniprot_id": [ { "id": "A0A8M2BG05_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BG05", "type": "external" } ], "mass": 20528.0, "length": 182, "protein_name": "Fas apoptotic inhibitory molecule b isoform X1", "gene_name": "faimb", "organism": "Zebrafish", "refseq_name": "fas apoptotic inhibitory molecule b isoform X1", "refseq_ac": [ { "id": "XP_005168767", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168767", "type": "external" } ], "gene_names_uniprotkb": "faimb; zgc:92712", "gene_names_refseq": "faimb; zgc:92712", "protein_names_uniprotkb": "Fas apoptotic inhibitory molecule b isoform X1", "protein_names_refseq": "fas apoptotic inhibitory molecule b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:1902042 negative regulation of extrinsic apoptotic signaling pathway via death domain receptors", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BG05-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BG25-1", "uniprot_id": [ { "id": "A0A8M2BG25_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BG25", "type": "external" } ], "mass": 49721.0, "length": 436, "protein_name": "N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase", "gene_name": "gcnt7", "organism": "Zebrafish", "refseq_name": "N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase", "refseq_ac": [ { "id": "XP_005168842", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168842", "type": "external" } ], "gene_names_uniprotkb": "gcnt7", "gene_names_refseq": "gcnt7", "protein_names_uniprotkb": "N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase", "protein_names_refseq": "N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase", "tax_id": 7955, "disease": "", "pathway": " (dre:101886707); (R-DRE-913709)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "E7FGA6", "ec_number_list": [], "go_molecular_function": "GO:0008375 acetylglucosaminyltransferase activity", "go_cellular_component": "GO:0000139 Golgi membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BG25-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BG34-1", "uniprot_id": [ { "id": "A0A8M2BG34_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BG34", "type": "external" } ], "mass": 41926.0, "length": 363, "protein_name": "N-terminal EF-hand calcium-binding protein 1", "gene_name": "necab3", "organism": "Zebrafish", "refseq_name": "N-terminal EF-hand calcium-binding protein 1", "refseq_ac": [ { "id": "XP_005168843", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168843", "type": "external" } ], "gene_names_uniprotkb": "necab3", "gene_names_refseq": "necab3", "protein_names_uniprotkb": "N-terminal EF-hand calcium-binding protein 1", "protein_names_refseq": "N-terminal EF-hand calcium-binding protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101887165)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_005168843.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005783 endoplasmic reticulum;GO:0000137 Golgi cis cisterna", "go_biological_process": "GO:0042984 regulation of amyloid precursor protein biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BG34-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BG55-1", "uniprot_id": [ { "id": "A0A8M2BG55_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BG55", "type": "external" } ], "mass": 51614.0, "length": 461, "protein_name": "BTB/POZ domain-containing protein 3a", "gene_name": "btbd3a", "organism": "Zebrafish", "refseq_name": "BTB/POZ domain-containing protein 3a", "refseq_ac": [ { "id": "NP_001139053", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001139053", "type": "external" } ], "gene_names_uniprotkb": "btbd3a; btbd3; si:dkey-210m15.6", "gene_names_refseq": "btbd3a; btbd3; si:dkey-210m15.6", "protein_names_uniprotkb": "BTB/POZ domain-containing protein 3a", "protein_names_refseq": "BTB (POZ) domain containing 3; BTB/POZ domain-containing protein 3a", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 2, "publication_id_list": "20080956;26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01019923.1, EH552501.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505379, SAMEA4476730 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH552501.1 and JBMGRA010000001.1. On or before Dec 31, 2011 this sequence version replaced XP_003197769.1, XP_003197770.1, XP_003197771.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]; Adapter protein for the cul3 E3 ubiquitin-protein ligase complex. Promotes the export of zbtb16/plzf from the nucleus to the cytoplasm and targets zbtb16/plzf for ubiquitination and degradation. Up-regulates neurog1 expression and antagonizes zbtb16/plzf, to promote neurogenesis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JA40;B8JKQ2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0021987 cerebral cortex development;GO:0048813 dendrite morphogenesis;GO:0022008 neurogenesis", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BG55-1", "record_type": "protein", "filter_code": "0000000.0000100.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BG68-1", "uniprot_id": [ { "id": "A0A8M2BG68_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BG68", "type": "external" } ], "mass": 159737.0, "length": 1345, "protein_name": "AIG1-type G domain-containing protein", "gene_name": "LOC101882729", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005168306", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168306", "type": "external" } ], "gene_names_uniprotkb": "LOC101882729", "gene_names_refseq": "LOC101882729", "protein_names_uniprotkb": "AIG1-type G domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101882729)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_005168306.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BG68-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BG84-1", "uniprot_id": [ { "id": "A0A8M2BG84_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BG84", "type": "external" } ], "mass": 12282.0, "length": 107, "protein_name": "Cysteine-rich protein 1", "gene_name": "zgc:195282; zgc:195285", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005168380", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168380", "type": "external" } ], "gene_names_uniprotkb": "zgc:195282; zgc:195285; zgc:195282; zgc:195285", "gene_names_refseq": "zgc:195282; zgc:195285", "protein_names_uniprotkb": "Cysteine-rich protein 1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100192223)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Seems to have a role in zinc absorption and may function as an intracellular zinc transport protein., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JCS1", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2BG84-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BG86-1", "uniprot_id": [ { "id": "A0A8M2BG86_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BG86", "type": "external" } ], "mass": 93150.0, "length": 834, "protein_name": "Amyloid-beta A4 precursor protein-binding family A member 2 isoform X1", "gene_name": "apba2b", "organism": "Zebrafish", "refseq_name": "amyloid-beta A4 precursor protein-binding family A member 2 isoform X1", "refseq_ac": [ { "id": "XP_005168985", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168985", "type": "external" } ], "gene_names_uniprotkb": "apba2b", "gene_names_refseq": "apba2b", "protein_names_uniprotkb": "Amyloid-beta A4 precursor protein-binding family A member 2 isoform X1", "protein_names_refseq": "amyloid-beta A4 precursor protein-binding family A member 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005168985.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G4R4;A0AC58G4R9", "ec_number_list": [], "go_molecular_function": "GO:0001540 amyloid-beta binding", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0043197 dendritic spine", "go_biological_process": "GO:0007268 chemical synaptic transmission", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BG86-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGD4-1", "uniprot_id": [ { "id": "A0A8M2BGD4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGD4", "type": "external" } ], "mass": 29934.0, "length": 259, "protein_name": "Kv channel interacting protein 3a, calsenilin isoform X1", "gene_name": "kcnip3a", "organism": "Zebrafish", "refseq_name": "Kv channel interacting protein 3a, calsenilin isoform X1", "refseq_ac": [ { "id": "XP_005169145", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169145", "type": "external" } ], "gene_names_uniprotkb": "kcnip3a; csenl; kcnip3l; zgc:73400", "gene_names_refseq": "csenl; kcnip3a; kcnip3l; zgc:73400", "protein_names_uniprotkb": "Kv channel interacting protein 3a, calsenilin isoform X1", "protein_names_refseq": "Kv channel interacting protein 3a, calsenilin isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015459 potassium channel regulator activity;GO:0005509 calcium ion binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0005267 potassium channel activity;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0008076 voltage-gated potassium channel complex;GO:0005886 plasma membrane;GO:0034702 monoatomic ion channel complex", "go_biological_process": "GO:1901379 regulation of potassium ion transmembrane transport;GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0009966 regulation of signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGD4-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGE0-1", "uniprot_id": [ { "id": "A0A8M2BGE0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGE0", "type": "external" } ], "mass": 33112.0, "length": 288, "protein_name": "arylamine N-acetyltransferase", "gene_name": "si:dkey-78a14.5", "organism": "Zebrafish", "refseq_name": "arylamine N-acetyltransferase, pineal gland isozyme NAT-10", "refseq_ac": [ { "id": "XP_005169078", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169078", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-78a14.5", "gene_names_refseq": "si:dkey-78a14.5", "protein_names_uniprotkb": "arylamine N-acetyltransferase; 2.3.1.5", "protein_names_refseq": "arylamine N-acetyltransferase, pineal gland isozyme NAT-10", "tax_id": 7955, "disease": "", "pathway": " (dre:795256)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004060 arylamine N-acetyltransferase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGE0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGE8-1", "uniprot_id": [ { "id": "A0A8M2BGE8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGE8", "type": "external" } ], "mass": 49255.0, "length": 454, "protein_name": "UNC93-like protein MFSD11 isoform X1", "gene_name": "mfsd11", "organism": "Zebrafish", "refseq_name": "UNC93-like protein MFSD11", "refseq_ac": [ { "id": "NP_001025425", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025425", "type": "external" } ], "gene_names_uniprotkb": "mfsd11; zgc:113380", "gene_names_refseq": "mfsd11; zgc:113380", "protein_names_uniprotkb": "UNC93-like protein MFSD11 isoform X1", "protein_names_refseq": "UNC93-like protein MFSD11", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.100387.1, SRR26395028.293847.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476770, SAMEA4476788 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On or before Jul 29, 2025 this sequence version replaced XP_005168543.1, NP_001025425.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IYP4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGE8-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGF6-1", "uniprot_id": [ { "id": "A0A8M2BGF6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGF6", "type": "external" } ], "mass": 115233.0, "length": 1053, "protein_name": "Nuclear receptor-interacting protein 1", "gene_name": "nrip1b", "organism": "Zebrafish", "refseq_name": "nuclear receptor-interacting protein 1", "refseq_ac": [ { "id": "XP_005169252", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169252", "type": "external" } ], "gene_names_uniprotkb": "nrip1b", "gene_names_refseq": "nrip1b", "protein_names_uniprotkb": "Nuclear receptor-interacting protein 1", "protein_names_refseq": "nuclear receptor-interacting protein 1", "tax_id": 7955, "disease": "congenital anomalies of the kidney and urinary tract (Disease Ontology:DOID:0080205); osteoporosis (Disease Ontology:DOID:11476)", "pathway": " (dre:100001853)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005169252.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F1QVR4;F8W2C1", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGF6-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGF9-1", "uniprot_id": [ { "id": "A0A8M2BGF9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGF9", "type": "external" } ], "mass": 47434.0, "length": 451, "protein_name": "MANSC domain-containing protein 1 isoform X1", "gene_name": "mansc1", "organism": "Zebrafish", "refseq_name": "MANSC domain-containing protein 1 precursor", "refseq_ac": [ { "id": "NP_001076496", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001076496", "type": "external" } ], "gene_names_uniprotkb": "mansc1; zgc:158374", "gene_names_refseq": "mansc1; zgc:158374", "protein_names_uniprotkb": "MANSC domain-containing protein 1 isoform X1", "protein_names_refseq": "MANSC domain-containing protein 1 precursor", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.2918705.1, SRR32588723.2594477.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505390 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000004.1. On or before Jul 31, 2025 this sequence version replaced XP_005168549.1, NP_001076496.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGF9-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGJ9-1", "uniprot_id": [ { "id": "A0A8M2BGJ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGJ9", "type": "external" } ], "mass": 45177.0, "length": 403, "protein_name": "CUE domain-containing protein 1a isoform a", "gene_name": "cuedc1a", "organism": "Zebrafish", "refseq_name": "CUE domain-containing protein 1a isoform a", "refseq_ac": [ { "id": "NP_001417829", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001417829", "type": "external" } ], "gene_names_uniprotkb": "cuedc1a; zgc:153423", "gene_names_refseq": "cuedc1a; zgc:153423", "protein_names_uniprotkb": "CUE domain-containing protein 1a isoform a", "protein_names_refseq": "CUE domain-containing protein 1a isoform a", "tax_id": 7955, "disease": "", "pathway": " (dre:768297)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;27615194", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01007632.1, SRR32588729.16742925.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000010.1. On Jun 8, 2024 this sequence version replaced XP_005169226.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0043130 ubiquitin binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BGJ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGK3-1", "uniprot_id": [ { "id": "A0A8M2BGK3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGK3", "type": "external" } ], "mass": 29089.0, "length": 264, "protein_name": "Uncharacterized protein", "gene_name": "LOC101886660", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005169245", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169245", "type": "external" } ], "gene_names_uniprotkb": "LOC101886660", "gene_names_refseq": "LOC101886660", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101886660)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005169245.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGK3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGN8-1", "uniprot_id": [ { "id": "A0A8M2BGN8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGN8", "type": "external" } ], "mass": 50008.0, "length": 448, "protein_name": "Transmembrane protein 44 isoform X1", "gene_name": "tmem44", "organism": "Zebrafish", "refseq_name": "transmembrane protein 44 isoform X1", "refseq_ac": [ { "id": "XP_005169457", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169457", "type": "external" } ], "gene_names_uniprotkb": "tmem44; zgc:153362", "gene_names_refseq": "tmem44; zgc:153362", "protein_names_uniprotkb": "Transmembrane protein 44 isoform X1", "protein_names_refseq": "transmembrane protein 44 isoform X1", "tax_id": 7955, "disease": "lysosomal storage disease (Disease Ontology:DOID:3211)", "pathway": " (dre:751636)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "22056673;26469318;27189481;34325655", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015174 basic amino acid transmembrane transporter activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M2BGN8-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGP9-1", "uniprot_id": [ { "id": "A0A8M2BGP9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGP9", "type": "external" } ], "mass": 136477.0, "length": 1214, "protein_name": "Bromodomain and PHD finger-containing protein 3 isoform X1", "gene_name": "brpf3a", "organism": "Zebrafish", "refseq_name": "bromodomain and PHD finger-containing protein 3 isoform X1", "refseq_ac": [ { "id": "XP_021335519", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335519", "type": "external" } ], "gene_names_uniprotkb": "brpf3a", "gene_names_refseq": "brpf3a", "protein_names_uniprotkb": "Bromodomain and PHD finger-containing protein 3 isoform X1", "protein_names_refseq": "bromodomain and PHD finger-containing protein 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100149254)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IS80", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0140566 histone reader activity", "go_cellular_component": "GO:0005634 nucleus;GO:0070776 MOZ/MORF histone acetyltransferase complex", "go_biological_process": "GO:0006338 chromatin remodeling;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGP9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGQ6-1", "uniprot_id": [ { "id": "A0A8M2BGQ6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGQ6", "type": "external" } ], "mass": 86881.0, "length": 788, "protein_name": "Myocardin isoform X1", "gene_name": "myocd", "organism": "Zebrafish", "refseq_name": "myocardin isoform X1", "refseq_ac": [ { "id": "XP_005169482", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169482", "type": "external" } ], "gene_names_uniprotkb": "myocd", "gene_names_refseq": "myocd", "protein_names_uniprotkb": "Myocardin isoform X1", "protein_names_refseq": "myocardin isoform X1", "tax_id": 7955, "disease": "congenital megabladder (Disease Ontology:DOID:0112014); aortic atherosclerosis (Disease Ontology:DOID:10230); dilated cardiomyopathy (Disease Ontology:DOID:12930); patent ductus arteriosus (Disease Ontology:DOID:13832); congenital heart disease (Disease Ontology:DOID:1682)", "pathway": " (dre:100331725)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003713 transcription coactivator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0051145 smooth muscle cell differentiation;GO:0055007 cardiac muscle cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGQ6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGS7-1", "uniprot_id": [ { "id": "A0A8M2BGS7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGS7", "type": "external" } ], "mass": 58477.0, "length": 519, "protein_name": "Uncharacterized protein", "gene_name": "LOC101885582", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "LOC101885582", "gene_names_refseq": "", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:101885582)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGS7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGU7-1", "uniprot_id": [ { "id": "A0A8M2BGU7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGU7", "type": "external" } ], "mass": 78367.0, "length": 682, "protein_name": "Constitutive coactivator of peroxisome proliferator-activated receptor gamma isoform X1", "gene_name": "fam120b", "organism": "Zebrafish", "refseq_name": "constitutive coactivator of peroxisome proliferator-activated receptor gamma", "refseq_ac": [ { "id": "NP_001429173", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429173", "type": "external" } ], "gene_names_uniprotkb": "fam120b; zgc:101006", "gene_names_refseq": "fam120b; zgc:101006", "protein_names_uniprotkb": "Constitutive coactivator of peroxisome proliferator-activated receptor gamma isoform X1", "protein_names_refseq": "constitutive coactivator of peroxisome proliferator-activated receptor gamma; family with sequence similarity 120B", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395062.1339198.1, SRR26395062.635227.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000013.1. On Jul 30, 2025 this sequence version replaced XP_073775605.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58H0U3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGU7-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BGW5-1", "uniprot_id": [ { "id": "A0A8M2BGW5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BGW5", "type": "external" } ], "mass": 34784.0, "length": 299, "protein_name": "Ceroid-lipofuscinosis neuronal protein 6a isoform X1", "gene_name": "cln6a", "organism": "Zebrafish", "refseq_name": "ceroid-lipofuscinosis neuronal protein 6a isoform X1", "refseq_ac": [ { "id": "XP_005169032", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169032", "type": "external" } ], "gene_names_uniprotkb": "cln6a; cln6; zgc:103565", "gene_names_refseq": "cln6a; cln6; zgc:103565", "protein_names_uniprotkb": "Ceroid-lipofuscinosis neuronal protein 6a isoform X1", "protein_names_refseq": "ceroid-lipofuscinosis neuronal protein 6a isoform X1", "tax_id": 7955, "disease": "neuronal ceroid lipofuscinosis 6A (Disease Ontology:DOID:0110729); neuronal ceroid lipofuscinosis 6B (Disease Ontology:DOID:0110730); neuronal ceroid lipofuscinosis (Disease Ontology:DOID:14503)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005169032.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005783 endoplasmic reticulum;GO:0016020 membrane", "go_biological_process": "GO:0007040 lysosome organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BGW5-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BH31-1", "uniprot_id": [ { "id": "A0A8M2BH31_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BH31", "type": "external" } ], "mass": 26055.0, "length": 230, "protein_name": "SH3 domain-binding glutamic acid-rich protein isoform X1", "gene_name": "sh3bgr", "organism": "Zebrafish", "refseq_name": "SH3 domain-binding glutamic acid-rich protein isoform X1", "refseq_ac": [ { "id": "XP_005169739", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169739", "type": "external" } ], "gene_names_uniprotkb": "sh3bgr; zgc:100896", "gene_names_refseq": "sh3bgr; zgc:100896", "protein_names_uniprotkb": "SH3 domain-binding glutamic acid-rich protein isoform X1", "protein_names_refseq": "SH3 domain-binding glutamic acid-rich protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:445130)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;27233781;28138518", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M2BH31-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BH19-1", "uniprot_id": [ { "id": "A0A8M2BH19_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BH19", "type": "external" } ], "mass": 127903.0, "length": 1161, "protein_name": "Uncharacterized protein si:dkey-92i15.4", "gene_name": "si:dkey-92i15.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-92i15.4", "refseq_ac": [ { "id": "XP_005169805", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169805", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-92i15.4", "gene_names_refseq": "si:dkey-92i15.4", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-92i15.4", "protein_names_refseq": "uncharacterized protein si:dkey-92i15.4", "tax_id": 7955, "disease": "inflammatory bowel disease (Disease Ontology:DOID:0050589)", "pathway": " (dre:336478)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005169805.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0042609 CD4 receptor binding;GO:0005125 cytokine activity", "go_cellular_component": "", "go_biological_process": "GO:0050729 positive regulation of inflammatory response;GO:0050930 induction of positive chemotaxis;GO:0019221 cytokine-mediated signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BH19-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BH20-1", "uniprot_id": [ { "id": "A0A8M2BH20_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BH20", "type": "external" } ], "mass": 59001.0, "length": 519, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101884065", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005169143", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169143", "type": "external" } ], "gene_names_uniprotkb": "LOC101884065", "gene_names_refseq": "LOC101884065", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GBI3;A0AC58GBJ8;A0AC58GBN1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BH20-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BH27-1", "uniprot_id": [ { "id": "A0A8M2BH27_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BH27", "type": "external" } ], "mass": 81463.0, "length": 726, "protein_name": "F-box only protein 34", "gene_name": "fbxo34", "organism": "Zebrafish", "refseq_name": "F-box only protein 34", "refseq_ac": [ { "id": "NP_001292475", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001292475", "type": "external" } ], "gene_names_uniprotkb": "fbxo34; fb99d03; si:ch73-132g21.5; wu:fb99d03", "gene_names_refseq": "fb99d03; fbxo34; si:ch73-132g21.5; wu:fb99d03", "protein_names_uniprotkb": "F-box only protein 34", "protein_names_refseq": "F-box only protein 34", "tax_id": 7955, "disease": "", "pathway": " (dre:323474)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;26767746", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01002826.1, SRR32588716.5838953.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505375, SAMEA3505378 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1, EH590741.1 and BE016503.1. On Mar 18, 2015 this sequence version replaced XP_002665197.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "X1WCP0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BH27-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BH30-1", "uniprot_id": [ { "id": "A0A8M2BH30_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BH30", "type": "external" } ], "mass": 75829.0, "length": 676, "protein_name": "SAM domain-containing protein SAMSN-1b isoform X1", "gene_name": "samsn1b", "organism": "Zebrafish", "refseq_name": "SAM domain-containing protein SAMSN-1b isoform X1", "refseq_ac": [ { "id": "XP_005169221", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169221", "type": "external" } ], "gene_names_uniprotkb": "samsn1b; zgc:103427", "gene_names_refseq": "samsn1b; zgc:103427", "protein_names_uniprotkb": "SAM domain-containing protein SAMSN-1b isoform X1", "protein_names_refseq": "SAM domain-containing protein SAMSN-1b isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:450018)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005169221.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:1902531 regulation of intracellular signal transduction;GO:0050869 negative regulation of B cell activation", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BH30-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BH52-1", "uniprot_id": [ { "id": "A0A8M2BH52_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BH52", "type": "external" } ], "mass": 26767.0, "length": 242, "protein_name": "Regulator of G-protein signaling 9-binding protein", "gene_name": "si:ch73-167i17.6", "organism": "Zebrafish", "refseq_name": "regulator of G-protein signaling 9-binding protein", "refseq_ac": [ { "id": "XP_005169975", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169975", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-167i17.6", "gene_names_refseq": "si:ch73-167i17.6", "protein_names_uniprotkb": "Regulator of G-protein signaling 9-binding protein", "protein_names_refseq": "regulator of G-protein signaling 9-binding protein", "tax_id": 7955, "disease": "bradyopsia 2 (Disease Ontology:DOID:0070364)", "pathway": " (dre:559232)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0043005 neuron projection", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0009968 negative regulation of signal transduction;GO:0050908 detection of light stimulus involved in visual perception", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BH52-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BH92-1", "uniprot_id": [ { "id": "A0A8M2BH92_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BH92", "type": "external" } ], "mass": 61647.0, "length": 566, "protein_name": "Zinc fingers and homeoboxes protein 2", "gene_name": "zhx2b", "organism": "Zebrafish", "refseq_name": "zinc fingers and homeoboxes protein 2", "refseq_ac": [ { "id": "XP_005170030", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170030", "type": "external" } ], "gene_names_uniprotkb": "zhx2b", "gene_names_refseq": "zhx2b", "protein_names_uniprotkb": "Zinc fingers and homeoboxes protein 2", "protein_names_refseq": "zinc fingers and homeoboxes protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:101883792)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HZE7;A0AC58HZE8;A0AC58HZE9;A0AC58HZF0;A0AC58HZF1;A0AC58HZF3;A0AC58HZF7", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BH92-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHA0-1", "uniprot_id": [ { "id": "A0A8M2BHA0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHA0", "type": "external" } ], "mass": 57524.0, "length": 500, "protein_name": "Uncharacterized protein si:ch211-227n13.3 isoform X1", "gene_name": "si:ch211-227n13.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-227n13.3 isoform X1", "refseq_ac": [ { "id": "XP_005169450", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169450", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-227n13.3", "gene_names_refseq": "si:ch211-227n13.3", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-227n13.3 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch211-227n13.3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:558023)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BHA0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHC2-1", "uniprot_id": [ { "id": "A0A8M2BHC2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHC2", "type": "external" } ], "mass": 16263.0, "length": 147, "protein_name": "UBAP1-MVB12-associated (UMA)-domain containing protein 1", "gene_name": "umad1", "organism": "Zebrafish", "refseq_name": "UBAP1-MVB12-associated (UMA)-domain containing protein 1", "refseq_ac": [ { "id": "NP_001121845", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121845", "type": "external" } ], "gene_names_uniprotkb": "umad1; si:dkey-119m17.2", "gene_names_refseq": "si:dkey-119m17.2; umad1", "protein_names_uniprotkb": "UBAP1-MVB12-associated (UMA)-domain containing protein 1", "protein_names_refseq": "UBAP1-MVB12-associated (UMA)-domain containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100148025)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: CA496215.1, EH542057.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505392, SAMEA4476758 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000019.1. On Jul 31, 2008 this sequence version replaced XP_001924034.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A5PMY3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BHC2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHA7-1", "uniprot_id": [ { "id": "A0A8M2BHA7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHA7", "type": "external" } ], "mass": 42200.0, "length": 372, "protein_name": "Complement C1q tumor necrosis factor-related protein 4", "gene_name": "c1qtnf13", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005170010", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170010", "type": "external" } ], "gene_names_uniprotkb": "c1qtnf13; c1qtnf4; si:ch211-219a15.3", "gene_names_refseq": "c1qtnf13; c1qtnf4; si:ch211-219a15.3", "protein_names_uniprotkb": "Complement C1q tumor necrosis factor-related protein 4; C1q/TNF-related protein 4", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:563077)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "18222405;32094353", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005125 cytokine activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0070105 positive regulation of interleukin-6-mediated signaling pathway;GO:1901224 positive regulation of non-canonical NF-kappaB signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BHA7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHE5-1", "uniprot_id": [ { "id": "A0A8M2BHE5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHE5", "type": "external" } ], "mass": 22669.0, "length": 196, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC101886929", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005169605", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005169605", "type": "external" } ], "gene_names_uniprotkb": "LOC101886929", "gene_names_refseq": "LOC101886929", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101886929)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003690 double-stranded DNA binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BHE5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHH4-1", "uniprot_id": [ { "id": "A0A8M2BHH4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHH4", "type": "external" } ], "mass": 31591.0, "length": 284, "protein_name": "Transmembrane protein 74", "gene_name": "LOC100537369", "organism": "Zebrafish", "refseq_name": "transmembrane protein 74", "refseq_ac": [ { "id": "XP_005170142", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170142", "type": "external" } ], "gene_names_uniprotkb": "LOC100537369", "gene_names_refseq": "LOC100537369", "protein_names_uniprotkb": "Transmembrane protein 74", "protein_names_refseq": "transmembrane protein 74", "tax_id": 7955, "disease": "", "pathway": " (dre:100537369)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BHH4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHH6-1", "uniprot_id": [ { "id": "A0A8M2BHH6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHH6", "type": "external" } ], "mass": 39667.0, "length": 350, "protein_name": "Transmembrane protein 268", "gene_name": "tmem268", "organism": "Zebrafish", "refseq_name": "transmembrane protein 268", "refseq_ac": [ { "id": "XP_005170158", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170158", "type": "external" } ], "gene_names_uniprotkb": "tmem268; si:ch211-222e23.2", "gene_names_refseq": "si:ch211-222e23.2", "protein_names_uniprotkb": "Transmembrane protein 268", "protein_names_refseq": "transmembrane protein 268", "tax_id": 7955, "disease": "", "pathway": " (dre:559789)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BHH6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHM2-1", "uniprot_id": [ { "id": "A0A8M2BHM2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHM2", "type": "external" } ], "mass": 231960.0, "length": 2051, "protein_name": "Integrase catalytic domain-containing protein", "gene_name": "LOC101883451", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005170398", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170398", "type": "external" } ], "gene_names_uniprotkb": "LOC101883451", "gene_names_refseq": "LOC101883451", "protein_names_uniprotkb": "Integrase catalytic domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101883451)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "GO:0015074 DNA integration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BHM2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHN5-1", "uniprot_id": [ { "id": "A0A8M2BHN5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHN5", "type": "external" } ], "mass": 57164.0, "length": 491, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC794515", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005170431", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170431", "type": "external" } ], "gene_names_uniprotkb": "LOC794515", "gene_names_refseq": "LOC794515", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:794515)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BHN5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHN9-1", "uniprot_id": [ { "id": "A0A8M2BHN9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHN9", "type": "external" } ], "mass": 37587.0, "length": 320, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC100007100", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005170450", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170450", "type": "external" } ], "gene_names_uniprotkb": "LOC100007100", "gene_names_refseq": "LOC100007100", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IFN8", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BHN9-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BHP9-1", "uniprot_id": [ { "id": "A0A8M2BHP9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BHP9", "type": "external" } ], "mass": 46642.0, "length": 402, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC101887027", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005170427", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170427", "type": "external" } ], "gene_names_uniprotkb": "LOC101887027", "gene_names_refseq": "LOC101887027", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101887027)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005170427.2. COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BHP9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BI01-1", "uniprot_id": [ { "id": "A0A8M2BI01_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BI01", "type": "external" } ], "mass": 46661.0, "length": 421, "protein_name": "C2 calcium-dependent domain-containing protein 4C", "gene_name": "LOC568754", "organism": "Zebrafish", "refseq_name": "C2 calcium-dependent domain-containing protein 4C", "refseq_ac": [ { "id": "XP_005170833", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170833", "type": "external" } ], "gene_names_uniprotkb": "LOC568754", "gene_names_refseq": "LOC568754", "protein_names_uniprotkb": "C2 calcium-dependent domain-containing protein 4C", "protein_names_refseq": "C2 calcium-dependent domain-containing protein 4C", "tax_id": 7955, "disease": "", "pathway": " (dre:568754)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BI01-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BI11-1", "uniprot_id": [ { "id": "A0A8M2BI11_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BI11", "type": "external" } ], "mass": 104534.0, "length": 957, "protein_name": "Uncharacterized protein", "gene_name": "LOC101885117", "organism": "Zebrafish", "refseq_name": "uncharacterized LOC101885117", "refseq_ac": [ { "id": "NP_001430397", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001430397", "type": "external" } ], "gene_names_uniprotkb": "LOC101885117", "gene_names_refseq": "LOC101885117", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized LOC101885117", "tax_id": 7955, "disease": "", "pathway": " (dre:101885117)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588722.12312470.1, SRR26395013.1300295.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476739, SAMEA4476748 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000016.1. On Sep 16, 2025 this sequence version replaced XP_005170859.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BI11-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BI48-1", "uniprot_id": [ { "id": "A0A8M2BI48_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BI48", "type": "external" } ], "mass": 40883.0, "length": 380, "protein_name": "Protein Tob2 isoform X1", "gene_name": "tob2", "organism": "Zebrafish", "refseq_name": "protein Tob2 isoform X1", "refseq_ac": [ { "id": "XP_005170840", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170840", "type": "external" } ], "gene_names_uniprotkb": "tob2", "gene_names_refseq": "tob2", "protein_names_uniprotkb": "Protein Tob2 isoform X1", "protein_names_refseq": "protein Tob2 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J0L2", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BI48-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BI56-1", "uniprot_id": [ { "id": "A0A8M2BI56_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BI56", "type": "external" } ], "mass": 91759.0, "length": 822, "protein_name": "Protein FAM83G", "gene_name": "fam83gb", "organism": "Zebrafish", "refseq_name": "protein FAM83G", "refseq_ac": [ { "id": "XP_005170931", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170931", "type": "external" } ], "gene_names_uniprotkb": "fam83gb", "gene_names_refseq": "fam83gb", "protein_names_uniprotkb": "Protein FAM83G", "protein_names_refseq": "protein FAM83G", "tax_id": 7955, "disease": "", "pathway": " (dre:101882918)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019901 protein kinase binding", "go_cellular_component": "GO:0005856 cytoskeleton", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BI56-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BI80-1", "uniprot_id": [ { "id": "A0A8M2BI80_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BI80", "type": "external" } ], "mass": 31510.0, "length": 286, "protein_name": "Uncharacterized protein si:dkeyp-57d7.4", "gene_name": "si:dkeyp-57d7.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkeyp-57d7.4", "refseq_ac": [ { "id": "XP_005170943", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170943", "type": "external" } ], "gene_names_uniprotkb": "si:dkeyp-57d7.4", "gene_names_refseq": "si:dkeyp-57d7.4", "protein_names_uniprotkb": "Uncharacterized protein si:dkeyp-57d7.4", "protein_names_refseq": "uncharacterized protein si:dkeyp-57d7.4", "tax_id": 7955, "disease": "", "pathway": " (dre:101885851)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IPQ3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BI80-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIA0-1", "uniprot_id": [ { "id": "A0A8M2BIA0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIA0", "type": "external" } ], "mass": 42122.0, "length": 361, "protein_name": "Integrase core domain-containing protein", "gene_name": "LOC101883163", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005171012", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171012", "type": "external" } ], "gene_names_uniprotkb": "LOC101883163", "gene_names_refseq": "LOC101883163", "protein_names_uniprotkb": "Integrase core domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101883163)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005171012.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HC87", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIA0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIA2-1", "uniprot_id": [ { "id": "A0A8M2BIA2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIA2", "type": "external" } ], "mass": 194551.0, "length": 1757, "protein_name": "FERM and PDZ domain-containing protein 1", "gene_name": "frmpd1a", "organism": "Zebrafish", "refseq_name": "FERM and PDZ domain-containing protein 1", "refseq_ac": [ { "id": "XP_005170993", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170993", "type": "external" } ], "gene_names_uniprotkb": "frmpd1a", "gene_names_refseq": "frmpd1a", "protein_names_uniprotkb": "FERM and PDZ domain-containing protein 1", "protein_names_refseq": "FERM and PDZ domain-containing protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886200)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIA2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIS6-1", "uniprot_id": [ { "id": "A0A8M2BIS6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIS6", "type": "external" } ], "mass": 40908.0, "length": 355, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101886546", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005171142", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171142", "type": "external" } ], "gene_names_uniprotkb": "LOC101886546", "gene_names_refseq": "LOC101886546", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886546)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0043565 sequence-specific DNA binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIS6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIB7-1", "uniprot_id": [ { "id": "A0A8M2BIB7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIB7", "type": "external" } ], "mass": 24919.0, "length": 227, "protein_name": "Adhesion G protein-coupled receptor E3", "gene_name": "LOC101886975", "organism": "Zebrafish", "refseq_name": "adhesion G protein-coupled receptor E3", "refseq_ac": [ { "id": "XP_005171078", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171078", "type": "external" } ], "gene_names_uniprotkb": "LOC101886975", "gene_names_refseq": "LOC101886975", "protein_names_uniprotkb": "Adhesion G protein-coupled receptor E3", "protein_names_refseq": "adhesion G protein-coupled receptor E3", "tax_id": 7955, "disease": "", "pathway": " (dre:101886975)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_005171078.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JFV0;A0AC58JFV4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIB7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIB8-1", "uniprot_id": [ { "id": "A0A8M2BIB8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIB8", "type": "external" } ], "mass": 114321.0, "length": 1026, "protein_name": "Inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1", "gene_name": "usp53b", "organism": "Zebrafish", "refseq_name": "inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1", "refseq_ac": [ { "id": "XP_005171014", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171014", "type": "external" } ], "gene_names_uniprotkb": "usp53b", "gene_names_refseq": "usp53b", "protein_names_uniprotkb": "Inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1", "protein_names_refseq": "inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1", "tax_id": 7955, "disease": "progressive familial intrahepatic cholestasis (Disease Ontology:DOID:0070221)", "pathway": " (dre:100537347)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005171014.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004843 cysteine-type deubiquitinase activity;GO:0016787 hydrolase activity", "go_cellular_component": "GO:0005911 cell-cell junction", "go_biological_process": "GO:0016579 protein deubiquitination;GO:0010996 response to auditory stimulus;GO:0007605 sensory perception of sound", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIB8-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIE6-1", "uniprot_id": [ { "id": "A0A8M2BIE6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIE6", "type": "external" } ], "mass": 119936.0, "length": 1075, "protein_name": "Uncharacterized protein si:ch73-140j24.4", "gene_name": "si:ch73-140j24.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch73-140j24.4", "refseq_ac": [ { "id": "XP_005171174", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171174", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-140j24.4", "gene_names_refseq": "si:ch73-140j24.4", "protein_names_uniprotkb": "Uncharacterized protein si:ch73-140j24.4", "protein_names_refseq": "uncharacterized protein si:ch73-140j24.4", "tax_id": 7955, "disease": "", "pathway": " (dre:101885000)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIE6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIF9-1", "uniprot_id": [ { "id": "A0A8M2BIF9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIF9", "type": "external" } ], "mass": 28097.0, "length": 243, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC101884641", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005171130", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171130", "type": "external" } ], "gene_names_uniprotkb": "LOC101884641", "gene_names_refseq": "LOC101884641", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101884641)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005171130.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIF9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIG9-1", "uniprot_id": [ { "id": "A0A8M2BIG9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIG9", "type": "external" } ], "mass": 47035.0, "length": 408, "protein_name": "Uncharacterized protein si:ch73-40a17.4", "gene_name": "si:ch73-40a17.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch73-40a17.4", "refseq_ac": [ { "id": "XP_005171145", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171145", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-40a17.4", "gene_names_refseq": "si:ch73-40a17.4", "protein_names_uniprotkb": "Uncharacterized protein si:ch73-40a17.4", "protein_names_refseq": "uncharacterized protein si:ch73-40a17.4", "tax_id": 7955, "disease": "", "pathway": " (dre:100149710)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "X1WHU8", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIG9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BII2-1", "uniprot_id": [ { "id": "A0A8M2BII2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BII2", "type": "external" } ], "mass": 22329.0, "length": 195, "protein_name": "Phosphatidylethanolamine-binding protein 4 isoform X1", "gene_name": "pebp4", "organism": "Zebrafish", "refseq_name": "phosphatidylethanolamine-binding protein 4 isoform X1", "refseq_ac": [ { "id": "XP_005170845", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005170845", "type": "external" } ], "gene_names_uniprotkb": "pebp4", "gene_names_refseq": "pebp4", "protein_names_uniprotkb": "Phosphatidylethanolamine-binding protein 4 isoform X1", "protein_names_refseq": "phosphatidylethanolamine-binding protein 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882266)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005170845.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BII2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIJ9-1", "uniprot_id": [ { "id": "A0A8M2BIJ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIJ9", "type": "external" } ], "mass": 221048.0, "length": 1911, "protein_name": "Uncharacterized protein acin1a isoform X1", "gene_name": "acin1a", "organism": "Zebrafish", "refseq_name": "uncharacterized protein acin1a isoform X1", "refseq_ac": [ { "id": "XP_005171332", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171332", "type": "external" } ], "gene_names_uniprotkb": "acin1a", "gene_names_refseq": "acin1a", "protein_names_uniprotkb": "Uncharacterized protein acin1a isoform X1", "protein_names_refseq": "uncharacterized protein acin1a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:368893)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_005171332.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIJ9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIR4-1", "uniprot_id": [ { "id": "A0A8M2BIR4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIR4", "type": "external" } ], "mass": 160372.0, "length": 1432, "protein_name": "Ras GTPase-activating protein nGAP isoform X1", "gene_name": "rasal2", "organism": "Zebrafish", "refseq_name": "ras GTPase-activating protein nGAP isoform X1", "refseq_ac": [ { "id": "XP_005171378", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171378", "type": "external" } ], "gene_names_uniprotkb": "rasal2", "gene_names_refseq": "rasal2", "protein_names_uniprotkb": "Ras GTPase-activating protein nGAP isoform X1", "protein_names_refseq": "ras GTPase-activating protein nGAP isoform X1", "tax_id": 7955, "disease": "developmental disorder of mental health (Disease Ontology:DOID:0060037)", "pathway": " (dre:793730)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "", "go_biological_process": "GO:1902531 regulation of intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIR4-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQB7-1", "uniprot_id": [ { "id": "A0A8M3AQB7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQB7", "type": "external" } ], "mass": 96581.0, "length": 890, "protein_name": "Polyhomeotic-like protein 3 isoform X1", "gene_name": "phc3", "organism": "Zebrafish", "refseq_name": "polyhomeotic-like protein 3 isoform 1", "refseq_ac": [ { "id": "NP_001430217", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001430217", "type": "external" } ], "gene_names_uniprotkb": "phc3", "gene_names_refseq": "phc3a; phc3; si:dkey-127k13.2", "protein_names_uniprotkb": "Polyhomeotic-like protein 3 isoform X1", "protein_names_refseq": "polyhomeotic-like protein 3 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:558094)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588730.6355883.1, SRR32588735.1947298.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN18715637 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000002.1. On Sep 10, 2025 this sequence version replaced XP_009296928.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0003682 chromatin binding;GO:0042393 histone binding", "go_cellular_component": "GO:0005634 nucleus;GO:0035102 PRC1 complex", "go_biological_process": "GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQB7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIN2-1", "uniprot_id": [ { "id": "A0A8M2BIN2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIN2", "type": "external" } ], "mass": 13145.0, "length": 120, "protein_name": "C-C motif chemokine 20", "gene_name": "ccl20l", "organism": "Zebrafish", "refseq_name": "C-C motif chemokine 20", "refseq_ac": [ { "id": "XP_005171405", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171405", "type": "external" } ], "gene_names_uniprotkb": "ccl20l", "gene_names_refseq": "ccl20l", "protein_names_uniprotkb": "C-C motif chemokine 20", "protein_names_refseq": "C-C motif chemokine 20", "tax_id": 7955, "disease": "exanthem (Disease Ontology:DOID:0050486); primary cutaneous T-cell non-Hodgkin lymphoma (Disease Ontology:DOID:0060061); anogenital venereal wart (Disease Ontology:DOID:11168); Lyme disease (Disease Ontology:DOID:11729); fungal infectious disease (Disease Ontology:DOID:1564); pancreatic cancer (Disease Ontology:DOID:1793); transient cerebral ischemia (Disease Ontology:DOID:224); brain ischemia (Disease Ontology:DOID:2316); acrodermatitis (Disease Ontology:DOID:2722); asthma (Disease Ontology:DOID:2841); IgA glomerulonephritis (Disease Ontology:DOID:2986); skin papilloma (Disease Ontology:DOID:3178); atopic dermatitis (Disease Ontology:DOID:3310); systemic scleroderma (Disease Ontology:DOID:418); ulcerative colitis (Disease Ontology:DOID:8577); psoriasis (Disease Ontology:DOID:8893)", "pathway": " (dre:101884175)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_005171405.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 16, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008009 chemokine activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIN2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIP2-1", "uniprot_id": [ { "id": "A0A8M2BIP2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIP2", "type": "external" } ], "mass": 25530.0, "length": 230, "protein_name": "Dynein light chain Tctex-type 4", "gene_name": "dynlt4", "organism": "Zebrafish", "refseq_name": "dynein light chain Tctex-type 4", "refseq_ac": [ { "id": "XP_005171408", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171408", "type": "external" } ], "gene_names_uniprotkb": "dynlt4", "gene_names_refseq": "dynlt4", "protein_names_uniprotkb": "Dynein light chain Tctex-type 4", "protein_names_refseq": "dynein light chain Tctex-type 4", "tax_id": 7955, "disease": "", "pathway": " (dre:793976)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_005171408.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIP2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIR2-1", "uniprot_id": [ { "id": "A0A8M2BIR2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIR2", "type": "external" } ], "mass": 174945.0, "length": 1595, "protein_name": "Disco-interacting protein 2 homolog C isoform X1", "gene_name": "dip2cb", "organism": "Zebrafish", "refseq_name": "disco-interacting protein 2 homolog C isoform X1", "refseq_ac": [ { "id": "XP_005171457", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171457", "type": "external" } ], "gene_names_uniprotkb": "dip2cb", "gene_names_refseq": "dip2cb", "protein_names_uniprotkb": "Disco-interacting protein 2 homolog C isoform X1", "protein_names_refseq": "disco-interacting protein 2 homolog C isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:569986)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005171457.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIR2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIR9-1", "uniprot_id": [ { "id": "A0A8M2BIR9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIR9", "type": "external" } ], "mass": 26102.0, "length": 232, "protein_name": "Cerebellin 14 precursor", "gene_name": "cbln14", "organism": "Zebrafish", "refseq_name": "cerebellin 14 precursor", "refseq_ac": [ { "id": "NP_001348169", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001348169", "type": "external" } ], "gene_names_uniprotkb": "cbln14; si:rp71-1g18.10", "gene_names_refseq": "cbln14; si:rp71-1g18.10", "protein_names_uniprotkb": "Cerebellin 14 precursor", "protein_names_refseq": "cerebellin 14 precursor; sghC1q14", "tax_id": 7955, "disease": "", "pathway": " (dre:100007164)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "21683091;26469318;28982700", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: EH522016.1, EH495704.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476769, SAMEA4476781 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from EH495704.1 and EH522016.1. On or before Mar 13, 2018 this sequence version replaced XP_005171398.1, XP_021326943.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BIR9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIS7-1", "uniprot_id": [ { "id": "A0A8M2BIS7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIS7", "type": "external" } ], "mass": 215008.0, "length": 1922, "protein_name": "Microtubule cross-linking factor 1 isoform X1", "gene_name": "mtcl1", "organism": "Zebrafish", "refseq_name": "microtubule cross-linking factor 1 isoform X1", "refseq_ac": [ { "id": "XP_005171514", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171514", "type": "external" } ], "gene_names_uniprotkb": "mtcl1", "gene_names_refseq": "mtcl1", "protein_names_uniprotkb": "Microtubule cross-linking factor 1 isoform X1", "protein_names_refseq": "microtubule cross-linking factor 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884972)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005171514.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0016020 membrane", "go_biological_process": "GO:0010506 regulation of autophagy", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIS7-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIT0-1", "uniprot_id": [ { "id": "A0A8M2BIT0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIT0", "type": "external" } ], "mass": 18749.0, "length": 169, "protein_name": "Dual specificity protein phosphatase 14", "gene_name": "LOC100150565", "organism": "Zebrafish", "refseq_name": "dual specificity protein phosphatase 14", "refseq_ac": [ { "id": "XP_005171464", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171464", "type": "external" } ], "gene_names_uniprotkb": "LOC100150565", "gene_names_refseq": "LOC100150565", "protein_names_uniprotkb": "Dual specificity protein phosphatase 14", "protein_names_refseq": "dual specificity protein phosphatase 14", "tax_id": 7955, "disease": "", "pathway": " (dre:100150565)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005171464.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004721 phosphoprotein phosphatase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIT0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIU5-1", "uniprot_id": [ { "id": "A0A8M2BIU5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIU5", "type": "external" } ], "mass": 68304.0, "length": 615, "protein_name": "GPI-anchor transamidase component GPAA1", "gene_name": "gpaa1", "organism": "Zebrafish", "refseq_name": "glycosylphosphatidylinositol anchor attachment 1 protein", "refseq_ac": [ { "id": "XP_005171175", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171175", "type": "external" } ], "gene_names_uniprotkb": "gpaa1", "gene_names_refseq": "gpaa1", "protein_names_uniprotkb": "GPI-anchor transamidase component GPAA1; GAA1 protein homolog; Glycosylphosphatidylinositol anchor attachment 1 protein", "protein_names_refseq": "glycosylphosphatidylinositol anchor attachment 1 protein", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Component of the glycosylphosphatidylinositol-anchor (GPI-anchor) transamidase (GPI-T) complex that catalyzes the formation of the linkage between a proprotein and a GPI-anchor and participates in GPI anchored protein biosynthesis. Binds GPI-anchor., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58H8W0;A0AC58H8X4;E7EZX6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0042765 GPI-anchor transamidase complex", "go_biological_process": "GO:0006506 GPI anchor biosynthetic process;GO:0016255 attachment of GPI anchor to protein", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIU5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIU6-1", "uniprot_id": [ { "id": "A0A8M2BIU6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIU6", "type": "external" } ], "mass": 41752.0, "length": 370, "protein_name": "Probable G-protein coupled receptor 148", "gene_name": "LOC101885494", "organism": "Zebrafish", "refseq_name": "probable G-protein coupled receptor 148", "refseq_ac": [ { "id": "XP_005171475", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171475", "type": "external" } ], "gene_names_uniprotkb": "LOC101885494", "gene_names_refseq": "LOC101885494", "protein_names_uniprotkb": "Probable G-protein coupled receptor 148", "protein_names_refseq": "probable G-protein coupled receptor 148", "tax_id": 7955, "disease": "", "pathway": " (dre:101885494)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIU6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIU9-1", "uniprot_id": [ { "id": "A0A8M2BIU9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIU9", "type": "external" } ], "mass": 96537.0, "length": 864, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC100005990", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005171592", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171592", "type": "external" } ], "gene_names_uniprotkb": "LOC100005990", "gene_names_refseq": "LOC100005990", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100005990)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIU9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIV8-1", "uniprot_id": [ { "id": "A0A8M2BIV8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIV8", "type": "external" } ], "mass": 36038.0, "length": 316, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101882640", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005171536", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171536", "type": "external" } ], "gene_names_uniprotkb": "LOC101882640", "gene_names_refseq": "LOC101882640", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882640)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_005171536.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIV8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIX3-1", "uniprot_id": [ { "id": "A0A8M2BIX3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIX3", "type": "external" } ], "mass": 5866.0, "length": 51, "protein_name": "Photoreceptor disk component PRCD", "gene_name": "prcd", "organism": "Zebrafish", "refseq_name": "photoreceptor disk component PRCD", "refseq_ac": [ { "id": "XP_005171605", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171605", "type": "external" } ], "gene_names_uniprotkb": "prcd", "gene_names_refseq": "prcd", "protein_names_uniprotkb": "Photoreceptor disk component PRCD", "protein_names_refseq": "photoreceptor disk component PRCD", "tax_id": 7955, "disease": "", "pathway": " (dre:101885756)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0042622 photoreceptor outer segment membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIX3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BIZ9-1", "uniprot_id": [ { "id": "A0A8M2BIZ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BIZ9", "type": "external" } ], "mass": 21940.0, "length": 205, "protein_name": "Transmembrane protein 127", "gene_name": "LOC101884896", "organism": "Zebrafish", "refseq_name": "transmembrane protein 127", "refseq_ac": [ { "id": "XP_005171776", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171776", "type": "external" } ], "gene_names_uniprotkb": "LOC101884896", "gene_names_refseq": "LOC101884896", "protein_names_uniprotkb": "Transmembrane protein 127", "protein_names_refseq": "transmembrane protein 127", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JN40;A0AC58JN44", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BIZ9-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJ70-1", "uniprot_id": [ { "id": "A0A8M2BJ70_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJ70", "type": "external" } ], "mass": 17404.0, "length": 151, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:ch211-102c2.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005171961", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171961", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-102c2.4; fk28d11; wu:fk28d11", "gene_names_refseq": "fk28d11; si:ch211-102c2.4; wu:fk28d11", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:568178)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "19646228;26469318;28087841", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BJ70-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJ99-1", "uniprot_id": [ { "id": "A0A8M2BJ99_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJ99", "type": "external" } ], "mass": 32519.0, "length": 306, "protein_name": "Transmembrane protein 174", "gene_name": "tmem174", "organism": "Zebrafish", "refseq_name": "transmembrane protein 174", "refseq_ac": [ { "id": "XP_005172035", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172035", "type": "external" } ], "gene_names_uniprotkb": "tmem174", "gene_names_refseq": "tmem174", "protein_names_uniprotkb": "Transmembrane protein 174", "protein_names_refseq": "transmembrane protein 174", "tax_id": 7955, "disease": "", "pathway": " (dre:101885856)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_005172035.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJ99-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJB0-1", "uniprot_id": [ { "id": "A0A8M2BJB0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJB0", "type": "external" } ], "mass": 97799.0, "length": 863, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101885857", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005172082", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172082", "type": "external" } ], "gene_names_uniprotkb": "LOC101885857", "gene_names_refseq": "LOC101885857", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101885857)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0005813 centrosome", "go_biological_process": "GO:0034453 microtubule anchoring", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJB0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJD6-1", "uniprot_id": [ { "id": "A0A8M2BJD6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJD6", "type": "external" } ], "mass": 233224.0, "length": 2124, "protein_name": "Protein PRRC2B isoform X1", "gene_name": "prrc2b", "organism": "Zebrafish", "refseq_name": "protein PRRC2B isoform X1", "refseq_ac": [ { "id": "XP_005172099", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172099", "type": "external" } ], "gene_names_uniprotkb": "prrc2b", "gene_names_refseq": "prrc2b", "protein_names_uniprotkb": "Protein PRRC2B isoform X1", "protein_names_refseq": "protein PRRC2B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561451)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0003700 DNA-binding transcription factor activity", "go_cellular_component": "", "go_biological_process": "GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJD6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJC1-1", "uniprot_id": [ { "id": "A0A8M2BJC1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJC1", "type": "external" } ], "mass": 45405.0, "length": 401, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC100538256", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005172124", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172124", "type": "external" } ], "gene_names_uniprotkb": "LOC100538256", "gene_names_refseq": "LOC100538256", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100538256)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJC1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJC7-1", "uniprot_id": [ { "id": "A0A8M2BJC7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJC7", "type": "external" } ], "mass": 33049.0, "length": 295, "protein_name": "Proteinase-activated receptor 2", "gene_name": "LOC101886547", "organism": "Zebrafish", "refseq_name": "proteinase-activated receptor 2", "refseq_ac": [ { "id": "XP_005172117", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172117", "type": "external" } ], "gene_names_uniprotkb": "LOC101886547", "gene_names_refseq": "LOC101886547", "protein_names_uniprotkb": "Proteinase-activated receptor 2", "protein_names_refseq": "proteinase-activated receptor 2", "tax_id": 7955, "disease": "", "pathway": " (dre:101886547)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005172117.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJC7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJF0-1", "uniprot_id": [ { "id": "A0A8M2BJF0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJF0", "type": "external" } ], "mass": 37841.0, "length": 352, "protein_name": "Roundabout homolog 4", "gene_name": "si:dkey-23a13.2", "organism": "Zebrafish", "refseq_name": "roundabout homolog 4", "refseq_ac": [ { "id": "XP_005172209", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172209", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-23a13.2", "gene_names_refseq": "si:dkey-23a13.2", "protein_names_uniprotkb": "Roundabout homolog 4", "protein_names_refseq": "roundabout homolog 4", "tax_id": 7955, "disease": "", "pathway": " (dre:101883814)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005172209.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004888 transmembrane signaling receptor activity", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007166 cell surface receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJF0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJG7-1", "uniprot_id": [ { "id": "A0A8M2BJG7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJG7", "type": "external" } ], "mass": 50397.0, "length": 445, "protein_name": "Uncharacterized protein", "gene_name": "LOC101883319", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005172173", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172173", "type": "external" } ], "gene_names_uniprotkb": "LOC101883319", "gene_names_refseq": "LOC101883319", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101883319)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0006915 apoptotic process;GO:0042981 regulation of apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJG7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJH6-1", "uniprot_id": [ { "id": "A0A8M2BJH6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJH6", "type": "external" } ], "mass": 204115.0, "length": 1772, "protein_name": "Interferon-induced very large GTPase 1", "gene_name": "si:dkey-85k7.12", "organism": "Zebrafish", "refseq_name": "interferon-induced very large GTPase 1", "refseq_ac": [ { "id": "XP_005172299", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172299", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-85k7.12", "gene_names_refseq": "si:dkey-85k7.12", "protein_names_uniprotkb": "Interferon-induced very large GTPase 1", "protein_names_refseq": "interferon-induced very large GTPase 1", "tax_id": 7955, "disease": "", "pathway": " (dre:556241)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A1D5NSY6", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJH6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJJ2-1", "uniprot_id": [ { "id": "A0A8M2BJJ2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJJ2", "type": "external" } ], "mass": 33725.0, "length": 285, "protein_name": "Uncharacterized protein si:dkey-111f13.5", "gene_name": "si:dkey-111f13.5", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-111f13.5", "refseq_ac": [ { "id": "XP_005172295", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172295", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-111f13.5", "gene_names_refseq": "si:dkey-111f13.5", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-111f13.5", "protein_names_refseq": "uncharacterized protein si:dkey-111f13.5", "tax_id": 7955, "disease": "", "pathway": " (dre:101882165)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005172295.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G407", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJJ2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJJ5-1", "uniprot_id": [ { "id": "A0A8M2BJJ5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJJ5", "type": "external" } ], "mass": 24005.0, "length": 191, "protein_name": "Uncharacterized protein si:ch73-223f5.1", "gene_name": "si:ch73-223f5.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch73-223f5.1", "refseq_ac": [ { "id": "XP_005172205", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172205", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-223f5.1", "gene_names_refseq": "si:ch73-223f5.1", "protein_names_uniprotkb": "Uncharacterized protein si:ch73-223f5.1", "protein_names_refseq": "uncharacterized protein si:ch73-223f5.1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882678)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A140LFP1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJJ5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJM3-1", "uniprot_id": [ { "id": "A0A8M2BJM3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJM3", "type": "external" } ], "mass": 59267.0, "length": 538, "protein_name": "Kelch repeat-containing protein isoform X1", "gene_name": "krcp", "organism": "Zebrafish", "refseq_name": "kelch repeat-containing protein isoform X1", "refseq_ac": [ { "id": "XP_005172311", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172311", "type": "external" } ], "gene_names_uniprotkb": "krcp; wu:fb97e08; wu:fi38d02; zgc:123032", "gene_names_refseq": "krcp; wu:fb97e08; wu:fi38d02; zgc:123032", "protein_names_uniprotkb": "Kelch repeat-containing protein isoform X1", "protein_names_refseq": "kelch repeat-containing protein isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJM3-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJQ4-1", "uniprot_id": [ { "id": "A0A8M2BJQ4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJQ4", "type": "external" } ], "mass": 32200.0, "length": 280, "protein_name": "SRR1-like protein isoform X1", "gene_name": "srrd", "organism": "Zebrafish", "refseq_name": "SRR1-like protein isoform X1", "refseq_ac": [ { "id": "XP_005172503", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172503", "type": "external" } ], "gene_names_uniprotkb": "srrd; zgc:153763", "gene_names_refseq": "srrd; zgc:153763", "protein_names_uniprotkb": "SRR1-like protein isoform X1", "protein_names_refseq": "SRR1-like protein isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G8A1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJQ4-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJQ9-1", "uniprot_id": [ { "id": "A0A8M2BJQ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJQ9", "type": "external" } ], "mass": 60070.0, "length": 548, "protein_name": "Ankyrin repeat domain 34Bb", "gene_name": "ankrd34bb", "organism": "Zebrafish", "refseq_name": "ankyrin repeat domain 34Bb", "refseq_ac": [ { "id": "NP_001091653", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001091653", "type": "external" } ], "gene_names_uniprotkb": "ankrd34bb; si:ch211-214j8.10", "gene_names_refseq": "ankrd34bb; si:ch211-214j8.10", "protein_names_uniprotkb": "Ankyrin repeat domain 34Bb", "protein_names_refseq": "ankyrin repeat domain 34Bb", "tax_id": 7955, "disease": "", "pathway": " (dre:565548)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01001080.1, SRR32588728.50413536.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505381, SAMEA3505382 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000005.1. On May 23, 2007 this sequence version replaced XP_693919.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A2BGQ0", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BJQ9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJR3-1", "uniprot_id": [ { "id": "A0A8M2BJR3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJR3", "type": "external" } ], "mass": 107542.0, "length": 985, "protein_name": "Proline-rich transmembrane protein 3/4 domain-containing protein", "gene_name": "LOC103908668", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005172528", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172528", "type": "external" } ], "gene_names_uniprotkb": "LOC103908668", "gene_names_refseq": "LOC103908668", "protein_names_uniprotkb": "Proline-rich transmembrane protein 3/4 domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103908668)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJR3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJS0-1", "uniprot_id": [ { "id": "A0A8M2BJS0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJS0", "type": "external" } ], "mass": 71749.0, "length": 656, "protein_name": "Zinc finger and BTB domain-containing protein 44", "gene_name": "zbtb44", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 44 isoform X1", "refseq_ac": [ { "id": "XP_005171966", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005171966", "type": "external" } ], "gene_names_uniprotkb": "zbtb44; si:dkey-127j5.1", "gene_names_refseq": "si:dkey-127j5.1; zbtb44", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 44", "protein_names_refseq": "zinc finger and BTB domain-containing protein 44 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:569656)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJS0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJT6-1", "uniprot_id": [ { "id": "A0A8M2BJT6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJT6", "type": "external" } ], "mass": 51485.0, "length": 452, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-75a21.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005172534", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172534", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-75a21.2; fa07b04; wu:fa07b04", "gene_names_refseq": "fa07b04; si:dkey-75a21.2; wu:fa07b04", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:794385)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2BJT6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BJW9-1", "uniprot_id": [ { "id": "A0A8M2BJW9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BJW9", "type": "external" } ], "mass": 33763.0, "length": 306, "protein_name": "Uncharacterized protein si:ch211-222e20.7 isoform X1", "gene_name": "si:ch211-222e20.7", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-222e20.7 isoform X1", "refseq_ac": [ { "id": "XP_005172751", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172751", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-222e20.7", "gene_names_refseq": "si:ch211-222e20.7", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-222e20.7 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch211-222e20.7 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883059)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005172751.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BJW9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BK24-1", "uniprot_id": [ { "id": "A0A8M2BK24_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BK24", "type": "external" } ], "mass": 50716.0, "length": 436, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:ch211-86h15.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005172935", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172935", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-86h15.1", "gene_names_refseq": "si:ch211-86h15.1", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:558435)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "12234666;26469318;27189481;9409775", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005172935.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II;GO:0045165 cell fate commitment", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M2BK24-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BK28-1", "uniprot_id": [ { "id": "A0A8M2BK28_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BK28", "type": "external" } ], "mass": 58800.0, "length": 522, "protein_name": "Protein ABHD15", "gene_name": "abhd15b", "organism": "Zebrafish", "refseq_name": "protein ABHD15", "refseq_ac": [ { "id": "XP_005172885", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172885", "type": "external" } ], "gene_names_uniprotkb": "abhd15b; LOC110437708", "gene_names_refseq": "LOC110437708", "protein_names_uniprotkb": "Protein ABHD15", "protein_names_refseq": "protein ABHD15", "tax_id": 7955, "disease": "", "pathway": " (dre:110437708)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0047372 monoacylglycerol lipase activity;GO:0034338 short-chain carboxylesterase activity", "go_cellular_component": "", "go_biological_process": "GO:0006629 lipid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BK28-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BK33-1", "uniprot_id": [ { "id": "A0A8M2BK33_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BK33", "type": "external" } ], "mass": 29448.0, "length": 261, "protein_name": "Calcium-activated potassium channel subunit beta-2", "gene_name": "s100p", "organism": "Zebrafish", "refseq_name": "calcium-activated potassium channel subunit beta-2 isoform X1", "refseq_ac": [ { "id": "XP_005172907", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172907", "type": "external" } ], "gene_names_uniprotkb": "s100p", "gene_names_refseq": "s100p", "protein_names_uniprotkb": "Calcium-activated potassium channel subunit beta-2; BK channel subunit beta-2; Calcium-activated potassium channel, subfamily M subunit beta-2; Charybdotoxin receptor subunit beta-2; K(VCA)beta-2; Maxi K channel subunit beta-2; Slo-beta-2", "protein_names_refseq": "calcium-activated potassium channel subunit beta-2 isoform X1", "tax_id": 7955, "disease": "hypertension (Disease Ontology:DOID:10763); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:796753); (R-DRE-1296052)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GRU8;E7FCW4", "ec_number_list": [], "go_molecular_function": "GO:0015459 potassium channel regulator activity;GO:0015269 calcium-activated potassium channel activity", "go_cellular_component": "GO:0008076 voltage-gated potassium channel complex;GO:0016020 membrane", "go_biological_process": "GO:0034220 monoatomic ion transmembrane transport;GO:0005513 detection of calcium ion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BK33-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKB0-1", "uniprot_id": [ { "id": "A0A8M2BKB0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKB0", "type": "external" } ], "mass": 137798.0, "length": 1240, "protein_name": "AT-rich interactive domain-containing protein 4B", "gene_name": "arid4b; tomm20a", "organism": "Zebrafish", "refseq_name": "AT-rich interactive domain-containing protein 4B isoform X1", "refseq_ac": [ { "id": "XP_005173089", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173089", "type": "external" } ], "gene_names_uniprotkb": "arid4b; tomm20a; arid4b; ch1073-321c8.1; tomm20; wu:fk47b11; zgc:73165", "gene_names_refseq": "arid4b", "protein_names_uniprotkb": "AT-rich interactive domain-containing protein 4B; 180 kDa Sin3-associated polypeptide; Histone deacetylase complex subunit SAP180", "protein_names_refseq": "AT-rich interactive domain-containing protein 4B isoform X1", "tax_id": 7955, "disease": "muscular atrophy (Disease Ontology:DOID:767)", "pathway": " (dre:100537923); (dre:406309)", "pathway_count": 2, "publication_count": 6, "publication_id_list": "20160088;24240475;25022898;30354240;31824944;33271598", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005173089.1. COMPLETENESS: full length., [RefSeq]; Acts as a transcriptional repressor. May function in the assembly and/or enzymatic activity of the Sin3A corepressor complex or in mediating interactions between the complex and other regulatory complexes. Plays a role in the regulation of epigenetic modifications at the PWS/AS imprinting center near the SNRPN promoter, where it might function as part of a complex with RB1 and ARID4A. Involved in spermatogenesis, together with ARID4A, where it functions as a transcriptional coactivator for AR (androgen receptor) and enhances expression of genes required for sperm maturation. Regulates expression of the tight junction protein CLDN3 in the testis, which is important for integrity of the blood-testis barrier. Plays a role in myeloid homeostasis where it regulates the histone methylation state of bone marrow cells and expression of various genes involved in hematopoiesis. May function as a leukemia suppressor., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0000976 transcription cis-regulatory region binding;GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005742 mitochondrial outer membrane translocase complex", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0006325 chromatin organization;GO:0006886 intracellular protein transport;GO:0006605 protein targeting", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A0A8M2BKB0-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKB2-1", "uniprot_id": [ { "id": "A0A8M2BKB2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKB2", "type": "external" } ], "mass": 97417.0, "length": 884, "protein_name": "Zinc finger protein 518B", "gene_name": "znf518b", "organism": "Zebrafish", "refseq_name": "zinc finger protein 518B", "refseq_ac": [ { "id": "XP_005173109", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173109", "type": "external" } ], "gene_names_uniprotkb": "znf518b", "gene_names_refseq": "znf518b", "protein_names_uniprotkb": "Zinc finger protein 518B", "protein_names_refseq": "zinc finger protein 518B", "tax_id": 7955, "disease": "", "pathway": " (dre:101882293)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKB2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKB3-1", "uniprot_id": [ { "id": "A0A8M2BKB3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKB3", "type": "external" } ], "mass": 35132.0, "length": 312, "protein_name": "Transmembrane protein 121", "gene_name": "zmp:0000001335", "organism": "Zebrafish", "refseq_name": "transmembrane protein 121", "refseq_ac": [ { "id": "XP_005173099", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173099", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000001335; LOC100329773", "gene_names_refseq": "LOC100329773", "protein_names_uniprotkb": "Transmembrane protein 121", "protein_names_refseq": "transmembrane protein 121", "tax_id": 7955, "disease": "", "pathway": " (dre:100329773)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKB3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKC2-1", "uniprot_id": [ { "id": "A0A8M2BKC2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKC2", "type": "external" } ], "mass": 55478.0, "length": 508, "protein_name": "Uncharacterized protein insyn2b isoform X2", "gene_name": "insyn2b", "organism": "Zebrafish", "refseq_name": "uncharacterized protein insyn2b isoform X2", "refseq_ac": [ { "id": "XP_005173123", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173123", "type": "external" } ], "gene_names_uniprotkb": "insyn2b", "gene_names_refseq": "insyn2b", "protein_names_uniprotkb": "Uncharacterized protein insyn2b isoform X2", "protein_names_refseq": "uncharacterized protein insyn2b isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:101884818)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005173123.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKC2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKC8-1", "uniprot_id": [ { "id": "A0A8M2BKC8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKC8", "type": "external" } ], "mass": 56879.0, "length": 507, "protein_name": "Rab9 effector protein with kelch motifs", "gene_name": "zmp:0000001301", "organism": "Zebrafish", "refseq_name": "RING finger protein B isoform X1", "refseq_ac": [ { "id": "XP_005172644", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172644", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000001301", "gene_names_refseq": "zmp:0000001301", "protein_names_uniprotkb": "Rab9 effector protein with kelch motifs", "protein_names_refseq": "RING finger protein B isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Rab9 effector required for endosome to trans-Golgi network (TGN) transport., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GL36;A0AC58GL38;A0AC58GL43;A0AC58GL45;A0AC58GL56;E7F538", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0060972 left/right pattern formation;GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKC8-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKI5-1", "uniprot_id": [ { "id": "A0A8M2BKI5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKI5", "type": "external" } ], "mass": 30736.0, "length": 282, "protein_name": "Protein FAM122B isoform X1", "gene_name": "pabir2", "organism": "Zebrafish", "refseq_name": "protein FAM122B isoform X1", "refseq_ac": [ { "id": "XP_005173263", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173263", "type": "external" } ], "gene_names_uniprotkb": "pabir2; fam122b; zgc:91872", "gene_names_refseq": "fam122b; pabir2; zgc:91872", "protein_names_uniprotkb": "Protein FAM122B isoform X1", "protein_names_refseq": "protein FAM122B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:445072)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "19478994;27189481", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004865 protein serine/threonine phosphatase inhibitor activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BKI5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKI7-1", "uniprot_id": [ { "id": "A0A8M2BKI7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKI7", "type": "external" } ], "mass": 43998.0, "length": 415, "protein_name": "Uncharacterized protein col26a1 isoform X1", "gene_name": "col26a1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein col26a1 isoform X1", "refseq_ac": [ { "id": "XP_005172779", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172779", "type": "external" } ], "gene_names_uniprotkb": "col26a1", "gene_names_refseq": "col26a1", "protein_names_uniprotkb": "Uncharacterized protein col26a1 isoform X1", "protein_names_refseq": "uncharacterized protein col26a1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101885935)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005172779.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030020 extracellular matrix structural constituent conferring tensile strength", "go_cellular_component": "GO:0031012 extracellular matrix", "go_biological_process": "GO:0030198 extracellular matrix organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKI7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKM1-1", "uniprot_id": [ { "id": "A0A8M2BKM1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKM1", "type": "external" } ], "mass": 164795.0, "length": 1514, "protein_name": "Uncharacterized protein bcorl1 isoform X1", "gene_name": "bcorl1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein bcorl1 isoform X1", "refseq_ac": [ { "id": "XP_073778258", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073778258", "type": "external" } ], "gene_names_uniprotkb": "bcorl1", "gene_names_refseq": "bcorl1", "protein_names_uniprotkb": "Uncharacterized protein bcorl1 isoform X1", "protein_names_refseq": "uncharacterized protein bcorl1 isoform X1", "tax_id": 7955, "disease": "Shukla-Vernon syndrome (Disease Ontology:DOID:0111841); lung non-small cell carcinoma (Disease Ontology:DOID:3908); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:792710)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58H8E5;A0AC58H8E6;A0AC58H8E7;A0AC58H8E9;A0AC58H8F2;A0AC58H8F4;E7F0N0", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKM1-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKP9-1", "uniprot_id": [ { "id": "A0A8M2BKP9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKP9", "type": "external" } ], "mass": 24703.0, "length": 222, "protein_name": "Transmembrane protein 158", "gene_name": "tmem158", "organism": "Zebrafish", "refseq_name": "transmembrane protein 158", "refseq_ac": [ { "id": "XP_005173504", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173504", "type": "external" } ], "gene_names_uniprotkb": "tmem158", "gene_names_refseq": "tmem158", "protein_names_uniprotkb": "Transmembrane protein 158", "protein_names_refseq": "transmembrane protein 158", "tax_id": 7955, "disease": "", "pathway": " (dre:100148963)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKP9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKR9-1", "uniprot_id": [ { "id": "A0A8M2BKR9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKR9", "type": "external" } ], "mass": 247135.0, "length": 2190, "protein_name": "Uncharacterized protein mymx", "gene_name": "mymx", "organism": "Zebrafish", "refseq_name": "uncharacterized protein mymx", "refseq_ac": [ { "id": "XP_005173083", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173083", "type": "external" } ], "gene_names_uniprotkb": "mymx", "gene_names_refseq": "mymx", "protein_names_uniprotkb": "Uncharacterized protein mymx", "protein_names_refseq": "uncharacterized protein mymx", "tax_id": 7955, "disease": "", "pathway": " (dre:100149084)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005173083.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding;GO:0005543 phospholipid binding", "go_cellular_component": "", "go_biological_process": "GO:0007520 myoblast fusion;GO:0051693 actin filament capping", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKR9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKS1-1", "uniprot_id": [ { "id": "A0A8M2BKS1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKS1", "type": "external" } ], "mass": 49384.0, "length": 435, "protein_name": "Hemopexin", "gene_name": "hpxb", "organism": "Zebrafish", "refseq_name": "hemopexin isoform X1", "refseq_ac": [ { "id": "XP_005173505", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173505", "type": "external" } ], "gene_names_uniprotkb": "hpxb", "gene_names_refseq": "hpxb", "protein_names_uniprotkb": "Hemopexin", "protein_names_refseq": "hemopexin isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:767787)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "GO:0005615 extracellular space;GO:0031012 extracellular matrix", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M2BKS1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKT5-1", "uniprot_id": [ { "id": "A0A8M2BKT5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKT5", "type": "external" } ], "mass": 34572.0, "length": 322, "protein_name": "Protein delta homolog 1", "gene_name": "dlk1", "organism": "Zebrafish", "refseq_name": "protein delta homolog 1", "refseq_ac": [ { "id": "XP_005173621", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173621", "type": "external" } ], "gene_names_uniprotkb": "dlk1", "gene_names_refseq": "dlk1", "protein_names_uniprotkb": "Protein delta homolog 1", "protein_names_refseq": "protein delta homolog 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883341)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005173621.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKT5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKV2-1", "uniprot_id": [ { "id": "A0A8M2BKV2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKV2", "type": "external" } ], "mass": 87486.0, "length": 794, "protein_name": "DISP complex protein LRCH3 isoform X1", "gene_name": "lrch3", "organism": "Zebrafish", "refseq_name": "DISP complex protein LRCH3 isoform X1", "refseq_ac": [ { "id": "XP_005173666", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173666", "type": "external" } ], "gene_names_uniprotkb": "lrch3", "gene_names_refseq": "lrch3", "protein_names_uniprotkb": "DISP complex protein LRCH3 isoform X1", "protein_names_refseq": "DISP complex protein LRCH3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100126105)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKV2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKV9-1", "uniprot_id": [ { "id": "A0A8M2BKV9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKV9", "type": "external" } ], "mass": 28251.0, "length": 266, "protein_name": "Protein FAM168A isoform X1", "gene_name": "fam168a", "organism": "Zebrafish", "refseq_name": "protein FAM168A isoform X1", "refseq_ac": [ { "id": "XP_005173669", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173669", "type": "external" } ], "gene_names_uniprotkb": "fam168a; zgc:153007", "gene_names_refseq": "fam168a; zgc:153007", "protein_names_uniprotkb": "Protein FAM168A isoform X1", "protein_names_refseq": "protein FAM168A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:751761)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "27189481;32745624", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:1905053 positive regulation of base-excision repair", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BKV9-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKV6-1", "uniprot_id": [ { "id": "A0A8M2BKV6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKV6", "type": "external" } ], "mass": 48087.0, "length": 430, "protein_name": "Ankyrin repeat domain-containing protein 63", "gene_name": "ankrd63", "organism": "Zebrafish", "refseq_name": "ankyrin repeat domain-containing protein 63", "refseq_ac": [ { "id": "XP_005173632", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173632", "type": "external" } ], "gene_names_uniprotkb": "ankrd63", "gene_names_refseq": "ankrd63", "protein_names_uniprotkb": "Ankyrin repeat domain-containing protein 63", "protein_names_refseq": "ankyrin repeat domain-containing protein 63", "tax_id": 7955, "disease": "", "pathway": " (dre:101885975)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKV6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKW5-1", "uniprot_id": [ { "id": "A0A8M2BKW5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKW5", "type": "external" } ], "mass": 86967.0, "length": 766, "protein_name": "Integrase catalytic domain-containing protein", "gene_name": "LOC101884251", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005173682", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173682", "type": "external" } ], "gene_names_uniprotkb": "LOC101884251", "gene_names_refseq": "LOC101884251", "protein_names_uniprotkb": "Integrase catalytic domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101884251)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005173682.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "GO:0015074 DNA integration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKW5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BKY9-1", "uniprot_id": [ { "id": "A0A8M2BKY9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BKY9", "type": "external" } ], "mass": 28224.0, "length": 245, "protein_name": "MOB kinase activator 2b isoform X1", "gene_name": "mob2b", "organism": "Zebrafish", "refseq_name": "MOB kinase activator 2b isoform X1", "refseq_ac": [ { "id": "XP_005173750", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173750", "type": "external" } ], "gene_names_uniprotkb": "mob2b; zgc:136844", "gene_names_refseq": "mob2b; zgc:136844", "protein_names_uniprotkb": "MOB kinase activator 2b isoform X1", "protein_names_refseq": "MOB kinase activator 2b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0030295 protein kinase activator activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BKY9-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BL29-1", "uniprot_id": [ { "id": "A0A8M2BL29_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BL29", "type": "external" } ], "mass": 87227.0, "length": 770, "protein_name": "MAP7 domain-containing protein 1b isoform X1", "gene_name": "map7d1b", "organism": "Zebrafish", "refseq_name": "MAP7 domain-containing protein 1b isoform X1", "refseq_ac": [ { "id": "XP_005173803", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173803", "type": "external" } ], "gene_names_uniprotkb": "map7d1b; zgc:172238", "gene_names_refseq": "map7d1b; zgc:172238", "protein_names_uniprotkb": "MAP7 domain-containing protein 1b isoform X1", "protein_names_refseq": "MAP7 domain-containing protein 1b isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0015630 microtubule cytoskeleton", "go_biological_process": "GO:0000226 microtubule cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BL29-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BL34-1", "uniprot_id": [ { "id": "A0A8M2BL34_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BL34", "type": "external" } ], "mass": 61539.0, "length": 535, "protein_name": "E3 ubiquitin-protein ligase TRIM39 isoform X1", "gene_name": "btr26", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase TRIM39 isoform X1", "refseq_ac": [ { "id": "XP_005173810", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173810", "type": "external" } ], "gene_names_uniprotkb": "btr26", "gene_names_refseq": "btr26", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase TRIM39 isoform X1", "protein_names_refseq": "E3 ubiquitin-protein ligase TRIM39 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100149795)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BL34-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BL53-1", "uniprot_id": [ { "id": "A0A8M2BL53_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BL53", "type": "external" } ], "mass": 51279.0, "length": 462, "protein_name": "Homeobox-containing protein 1", "gene_name": "hmbox1b", "organism": "Zebrafish", "refseq_name": "homeobox-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005173876", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173876", "type": "external" } ], "gene_names_uniprotkb": "hmbox1b", "gene_names_refseq": "hmbox1b", "protein_names_uniprotkb": "Homeobox-containing protein 1", "protein_names_refseq": "homeobox-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100317353)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Binds directly to 5'-TTAGGG-3' repeats in telomeric DNA. Associates with the telomerase complex at sites of active telomere processing and positively regulates telomere elongation. Important for TERT binding to chromatin, indicating a role in recruitment of the telomerase complex to telomeres. Also plays a role in the alternative lengthening of telomeres (ALT) pathway in telomerase-negative cells where it promotes formation and/or maintenance of ALT-associated promyelocytic leukemia bodies (APBs). Enhances formation of telomere C-circles in ALT cells, suggesting a possible role in telomere recombination. Might also be involved in the DNA damage response at telomeres., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0044877 protein-containing complex binding;GO:0003691 double-stranded telomeric DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016605 PML body;GO:0015030 Cajal body;GO:0000781 chromosome, telomeric region", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription;GO:0007004 telomere maintenance via telomerase", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BL53-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BL54-1", "uniprot_id": [ { "id": "A0A8M2BL54_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BL54", "type": "external" } ], "mass": 38349.0, "length": 341, "protein_name": "Sphingosine 1-phosphate receptor 3", "gene_name": "s1pr3b", "organism": "Zebrafish", "refseq_name": "sphingosine 1-phosphate receptor 3", "refseq_ac": [ { "id": "XP_005173925", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173925", "type": "external" } ], "gene_names_uniprotkb": "s1pr3b", "gene_names_refseq": "s1pr3b", "protein_names_uniprotkb": "Sphingosine 1-phosphate receptor 3", "protein_names_refseq": "sphingosine 1-phosphate receptor 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100332187)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0038036 sphingosine-1-phosphate receptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway;GO:0030334 regulation of cell migration;GO:0042074 cell migration involved in gastrulation;GO:0001944 vasculature development;GO:0008078 mesodermal cell migration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BL54-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BL62-1", "uniprot_id": [ { "id": "A0A8M2BL62_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BL62", "type": "external" } ], "mass": 77395.0, "length": 675, "protein_name": "FERM domain-containing protein 7 isoform X1", "gene_name": "frmd7", "organism": "Zebrafish", "refseq_name": "FERM domain-containing protein 7 isoform X1", "refseq_ac": [ { "id": "XP_005173955", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173955", "type": "external" } ], "gene_names_uniprotkb": "frmd7; zgc:153674", "gene_names_refseq": "frmd7; zgc:153674", "protein_names_uniprotkb": "FERM domain-containing protein 7 isoform X1", "protein_names_refseq": "FERM domain-containing protein 7 isoform X1", "tax_id": 7955, "disease": "congenital nystagmus 1 (Disease Ontology:DOID:0111790)", "pathway": " (dre:751637)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "27189481", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_005173955.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity;GO:0008092 cytoskeletal protein binding", "go_cellular_component": "", "go_biological_process": "GO:0032502 developmental process", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M2BL62-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BL73-1", "uniprot_id": [ { "id": "A0A8M2BL73_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BL73", "type": "external" } ], "mass": 207404.0, "length": 1789, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101884756", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005173926", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173926", "type": "external" } ], "gene_names_uniprotkb": "LOC101884756", "gene_names_refseq": "LOC101884756", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884756)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051015 actin filament binding;GO:0003779 actin binding", "go_cellular_component": "GO:0014069 postsynaptic density;GO:0030027 lamellipodium;GO:0030425 dendrite;GO:0045211 postsynaptic membrane;GO:0030864 cortical actin cytoskeleton", "go_biological_process": "GO:0048812 neuron projection morphogenesis;GO:0098974 postsynaptic actin cytoskeleton organization;GO:0045773 positive regulation of axon extension;GO:0061003 positive regulation of dendritic spine morphogenesis;GO:0030833 regulation of actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BL73-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BL85-1", "uniprot_id": [ { "id": "A0A8M2BL85_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BL85", "type": "external" } ], "mass": 118879.0, "length": 1085, "protein_name": "AF4/FMR2 family member 4 isoform X1", "gene_name": "aff4", "organism": "Zebrafish", "refseq_name": "AF4/FMR2 family member 4 isoform X1", "refseq_ac": [ { "id": "XP_005173956", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005173956", "type": "external" } ], "gene_names_uniprotkb": "aff4", "gene_names_refseq": "aff4", "protein_names_uniprotkb": "AF4/FMR2 family member 4 isoform X1", "protein_names_refseq": "AF4/FMR2 family member 4 isoform X1", "tax_id": 7955, "disease": "skin melanoma (Disease Ontology:DOID:8923); colorectal cancer (Disease Ontology:DOID:9256); type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:556421)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IBK7;A0AC58IBN1", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0032783 super elongation complex;GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0050877 nervous system process;GO:0006354 DNA-templated transcription elongation;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BL85-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BL96-1", "uniprot_id": [ { "id": "A0A8M2BL96_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BL96", "type": "external" } ], "mass": 27689.0, "length": 237, "protein_name": "BTB/POZ domain-containing protein KCTD6a", "gene_name": "kctd6a", "organism": "Zebrafish", "refseq_name": "BTB/POZ domain-containing protein KCTD6a", "refseq_ac": [ { "id": "NP_001074463", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001074463", "type": "external" } ], "gene_names_uniprotkb": "kctd6a; si:dkeyp-87e7.3", "gene_names_refseq": "kctd6a; si:dkeyp-87e7.3", "protein_names_uniprotkb": "BTB/POZ domain-containing protein KCTD6a", "protein_names_refseq": "BTB/POZ domain-containing protein KCTD6a; potassium channel tetramerisation domain containing 6a", "tax_id": 7955, "disease": "", "pathway": " (dre:100008047)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588718.25954140.1, SRR26395062.1716622.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JBMGRA010000022.1. On Feb 17, 2008 this sequence version replaced XP_001346363.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "Q1LVR8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0051260 protein homooligomerization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BL96-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLC0-1", "uniprot_id": [ { "id": "A0A8M2BLC0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLC0", "type": "external" } ], "mass": 136916.0, "length": 1230, "protein_name": "Nucleolar protein 8", "gene_name": "nol8", "organism": "Zebrafish", "refseq_name": "nucleolar protein 8 isoform X1", "refseq_ac": [ { "id": "XP_005174031", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174031", "type": "external" } ], "gene_names_uniprotkb": "nol8; si:ch211-103f16.2", "gene_names_refseq": "nol8; si:ch211-103f16.2", "protein_names_uniprotkb": "Nucleolar protein 8", "protein_names_refseq": "nucleolar protein 8 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:613021)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Plays an essential role in the survival of diffuse-type gastric cancer cells. Acts as a nucleolar anchoring protein for DDX47. May be involved in regulation of gene expression at the post-transcriptional level or in ribosome biogenesis in cancer cells., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005730 nucleolus", "go_biological_process": "GO:1902570 protein localization to nucleolus", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M2BLC0-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLE2-1", "uniprot_id": [ { "id": "A0A8M2BLE2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLE2", "type": "external" } ], "mass": 35524.0, "length": 308, "protein_name": "Chemokine XC receptor 1-like", "gene_name": "xcr1a.3", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "xcr1a.3; LOC793148", "gene_names_refseq": "", "protein_names_uniprotkb": "Chemokine XC receptor 1-like", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:793148)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016493 C-C chemokine receptor activity;GO:0019957 C-C chemokine binding", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0019722 calcium-mediated signaling;GO:0060326 cell chemotaxis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLE2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLE7-1", "uniprot_id": [ { "id": "A0A8M2BLE7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLE7", "type": "external" } ], "mass": 55814.0, "length": 538, "protein_name": "Retinoic acid-induced protein 2", "gene_name": "rai2", "organism": "Zebrafish", "refseq_name": "retinoic acid-induced protein 2", "refseq_ac": [ { "id": "XP_005174218", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174218", "type": "external" } ], "gene_names_uniprotkb": "rai2; zmp:0000001174", "gene_names_refseq": "zmp:0000001174", "protein_names_uniprotkb": "Retinoic acid-induced protein 2", "protein_names_refseq": "retinoic acid-induced protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:101885820)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005174218.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0048513 animal organ development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLE7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLE9-1", "uniprot_id": [ { "id": "A0A8M2BLE9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLE9", "type": "external" } ], "mass": 30711.0, "length": 266, "protein_name": "Uncharacterized protein wu:fb74b10 isoform X1", "gene_name": "wu:fb74b10", "organism": "Zebrafish", "refseq_name": "uncharacterized protein wu:fb74b10 isoform X1", "refseq_ac": [ { "id": "XP_005174219", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174219", "type": "external" } ], "gene_names_uniprotkb": "wu:fb74b10", "gene_names_refseq": "wu:fb74b10", "protein_names_uniprotkb": "Uncharacterized protein wu:fb74b10 isoform X1", "protein_names_refseq": "uncharacterized protein wu:fb74b10 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101885888)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_005174219.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLE9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLG6-1", "uniprot_id": [ { "id": "A0A8M2BLG6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLG6", "type": "external" } ], "mass": 58457.0, "length": 515, "protein_name": "Potassium voltage-gated channel subfamily A member 3", "gene_name": "kcna3b", "organism": "Zebrafish", "refseq_name": "potassium voltage-gated channel subfamily A member 3", "refseq_ac": [ { "id": "XP_005174156", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174156", "type": "external" } ], "gene_names_uniprotkb": "kcna3b; LOC100330283", "gene_names_refseq": "LOC100330283", "protein_names_uniprotkb": "Potassium voltage-gated channel subfamily A member 3", "protein_names_refseq": "potassium voltage-gated channel subfamily A member 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100330283)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005251 delayed rectifier potassium channel activity", "go_cellular_component": "GO:0016020 membrane;GO:0008076 voltage-gated potassium channel complex", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0001508 action potential;GO:0071805 potassium ion transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLG6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLL3-1", "uniprot_id": [ { "id": "A0A8M2BLL3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLL3", "type": "external" } ], "mass": 35871.0, "length": 308, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC101882607", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005174450", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174450", "type": "external" } ], "gene_names_uniprotkb": "LOC101882607", "gene_names_refseq": "LOC101882607", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JEU6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLL3-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLL8-1", "uniprot_id": [ { "id": "A0A8M2BLL8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLL8", "type": "external" } ], "mass": 70835.0, "length": 617, "protein_name": "Crestin", "gene_name": "LOC100334495", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "LOC100334495", "gene_names_refseq": "", "protein_names_uniprotkb": "Crestin", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:100334495)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLL8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLN5-1", "uniprot_id": [ { "id": "A0A8M2BLN5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLN5", "type": "external" } ], "mass": 34120.0, "length": 306, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101883913", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_005174568", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174568", "type": "external" } ], "gene_names_uniprotkb": "LOC101883913", "gene_names_refseq": "LOC101883913", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883913)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 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This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_005174568.1. 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This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLN8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLN9-1", "uniprot_id": [ { "id": "A0A8M2BLN9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLN9", "type": "external" } ], "mass": 25616.0, "length": 224, "protein_name": "Immunoglobulin domain-containing protein", "gene_name": "LOC100148254", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005174066", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174066", "type": "external" } ], "gene_names_uniprotkb": "LOC100148254", "gene_names_refseq": "LOC100148254", "protein_names_uniprotkb": "Immunoglobulin domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:100148254)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLN9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLP6-1", "uniprot_id": [ { "id": "A0A8M2BLP6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLP6", "type": "external" } ], "mass": 38597.0, "length": 342, "protein_name": "Probable G-protein coupled receptor 21", "gene_name": "LOC101884949", "organism": "Zebrafish", "refseq_name": "probable G-protein coupled receptor 21", "refseq_ac": [ { "id": "XP_005174488", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174488", "type": "external" } ], "gene_names_uniprotkb": "LOC101884949", "gene_names_refseq": "LOC101884949", "protein_names_uniprotkb": "Probable G-protein coupled receptor 21", "protein_names_refseq": "probable G-protein coupled receptor 21", "tax_id": 7955, "disease": "", "pathway": " (dre:101884949)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008020 G protein-coupled photoreceptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0007602 phototransduction;GO:0071482 cellular response to light stimulus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLP6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLU4-1", "uniprot_id": [ { "id": "A0A8M2BLU4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLU4", "type": "external" } ], "mass": 108604.0, "length": 985, "protein_name": "Leucine-rich repeat and fibronectin type-III domain-containing protein 4", "gene_name": "LOC110437730", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat and fibronectin type-III domain-containing protein 4", "refseq_ac": [ { "id": "XP_005174745", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174745", "type": "external" } ], "gene_names_uniprotkb": "LOC110437730", "gene_names_refseq": "LOC110437730", "protein_names_uniprotkb": "Leucine-rich repeat and fibronectin type-III domain-containing protein 4", "protein_names_refseq": "leucine-rich repeat and fibronectin type-III domain-containing protein 4", "tax_id": 7955, "disease": "", "pathway": " (dre:110437730)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G1K1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLU4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLW7-1", "uniprot_id": [ { "id": "A0A8M2BLW7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLW7", "type": "external" } ], "mass": 49901.0, "length": 434, "protein_name": "Ras association domain-containing protein 10", "gene_name": "rassf10a", "organism": "Zebrafish", "refseq_name": "ras association domain-containing protein 10", "refseq_ac": [ { "id": "XP_005174418", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174418", "type": "external" } ], "gene_names_uniprotkb": "rassf10a", "gene_names_refseq": "rassf10a", "protein_names_uniprotkb": "Ras association domain-containing protein 10", "protein_names_refseq": "ras association domain-containing protein 10", "tax_id": 7955, "disease": "", "pathway": " (dre:559430)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLW7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M2BLX0-1", "uniprot_id": [ { "id": "A0A8M2BLX0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M2BLX0", "type": "external" } ], "mass": 32270.0, "length": 275, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC101882787", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005174453", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005174453", "type": "external" } ], "gene_names_uniprotkb": "LOC101882787", "gene_names_refseq": "LOC101882787", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101882787)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_005174453.1. COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M2BLX0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AGU5-1", "uniprot_id": [ { "id": "A0A8M3AGU5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AGU5", "type": "external" } ], "mass": 187542.0, "length": 1673, "protein_name": "Ligand-dependent nuclear receptor corepressor-like protein isoform X1", "gene_name": "lcorl", "organism": "Zebrafish", "refseq_name": "ligand-dependent nuclear receptor corepressor-like protein isoform X1", "refseq_ac": [ { "id": "XP_009289502", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289502", "type": "external" } ], "gene_names_uniprotkb": "lcorl", "gene_names_refseq": "lcorl", "protein_names_uniprotkb": "Ligand-dependent nuclear receptor corepressor-like protein isoform X1", "protein_names_refseq": "ligand-dependent nuclear receptor corepressor-like protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:558430)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009289502.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AGU5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AH26-1", "uniprot_id": [ { "id": "A0A8M3AH26_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AH26", "type": "external" } ], "mass": 36389.0, "length": 319, "protein_name": "Olfactory receptor 1D2", "gene_name": "or62c3", "organism": "Zebrafish", "refseq_name": "olfactory receptor 1D2", "refseq_ac": [ { "id": "XP_009289739", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289739", "type": "external" } ], "gene_names_uniprotkb": "or62c3", "gene_names_refseq": "or62c3", "protein_names_uniprotkb": "Olfactory receptor 1D2", "protein_names_refseq": "olfactory receptor 1D2", "tax_id": 7955, "disease": "", "pathway": " (dre:100151169)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 2% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009289739.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AH26-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AHM3-1", "uniprot_id": [ { "id": "A0A8M3AHM3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AHM3", "type": "external" } ], "mass": 75977.0, "length": 692, "protein_name": "Uncharacterized protein si:dkey-23k10.3 isoform X1", "gene_name": "si:dkey-23k10.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-23k10.3 isoform X1", "refseq_ac": [ { "id": "XP_009290117", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290117", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-23k10.3", "gene_names_refseq": "si:dkey-23k10.3", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-23k10.3 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-23k10.3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100150225)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008428 ribonuclease inhibitor activity", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005886 plasma membrane;GO:0030027 lamellipodium;GO:0032311 angiogenin-PRI complex", "go_biological_process": "GO:0016477 cell migration;GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation;GO:0045765 regulation of angiogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AHM3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AI36-1", "uniprot_id": [ { "id": "A0A8M3AI36_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AI36", "type": "external" } ], "mass": 319847.0, "length": 2866, "protein_name": "Neurobeachin", "gene_name": "lrba", "organism": "Zebrafish", "refseq_name": "lipopolysaccharide-responsive and beige-like anchor protein isoform X1", "refseq_ac": [ { "id": "XP_009289523", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289523", "type": "external" } ], "gene_names_uniprotkb": "lrba", "gene_names_refseq": "lrba", "protein_names_uniprotkb": "Neurobeachin; Lysosomal-trafficking regulator 2", "protein_names_refseq": "lipopolysaccharide-responsive and beige-like anchor protein isoform X1", "tax_id": 7955, "disease": "autism spectrum disorder (Disease Ontology:DOID:0060041); common variable immunodeficiency 8 (Disease Ontology:DOID:0081151)", "pathway": " (dre:562379)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009289523.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M3AI36-1", "record_type": "protein", "filter_code": "0000000.0000111.001000.000000000000000001.0100000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AIB7-1", "uniprot_id": [ { "id": "A0A8M3AIB7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AIB7", "type": "external" } ], "mass": 50670.0, "length": 455, "protein_name": "Serine incorporator 2", "gene_name": "serinc2l", "organism": "Zebrafish", "refseq_name": "serine incorporator 2", "refseq_ac": [ { "id": "XP_009290780", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290780", "type": "external" } ], "gene_names_uniprotkb": "serinc2l", "gene_names_refseq": "serinc2l", "protein_names_uniprotkb": "Serine incorporator 2", "protein_names_refseq": "serine incorporator 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100329297)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009290780.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AIB7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AR08-1", "uniprot_id": [ { "id": "A0A8M3AR08_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AR08", "type": "external" } ], "mass": 144998.0, "length": 1309, "protein_name": "WD repeat-containing protein 17 isoform X1", "gene_name": "wdr17", "organism": "Zebrafish", "refseq_name": "WD repeat-containing protein 17 isoform X1", "refseq_ac": [ { "id": "XP_009290943", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290943", "type": "external" } ], "gene_names_uniprotkb": "wdr17; si:ch211-72g23.1", "gene_names_refseq": "si:ch211-72g23.1; wdr17", "protein_names_uniprotkb": "WD repeat-containing protein 17 isoform X1", "protein_names_refseq": "WD repeat-containing protein 17 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561804)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;28252024;31934309", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0002088 lens development in camera-type eye", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M3AR08-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AIK7-1", "uniprot_id": [ { "id": "A0A8M3AIK7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AIK7", "type": "external" } ], "mass": 21879.0, "length": 198, "protein_name": "Uncharacterized protein C1orf232", "gene_name": "LOC101883133", "organism": "Zebrafish", "refseq_name": "uncharacterized protein C1orf232", "refseq_ac": [ { "id": "XP_009290985", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290985", "type": "external" } ], "gene_names_uniprotkb": "LOC101883133", "gene_names_refseq": "LOC101883133", "protein_names_uniprotkb": "Uncharacterized protein C1orf232", "protein_names_refseq": "uncharacterized protein C1orf232", "tax_id": 7955, "disease": "", "pathway": " (dre:101883133)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009290985.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0007283 spermatogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AIK7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AIN3-1", "uniprot_id": [ { "id": "A0A8M3AIN3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AIN3", "type": "external" } ], "mass": 109447.0, "length": 975, "protein_name": "Transcriptional-regulating factor 1 isoform X1", "gene_name": "LOC100535969", "organism": "Zebrafish", "refseq_name": "transcriptional-regulating factor 1 isoform X1", "refseq_ac": [ { "id": "XP_009291072", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291072", "type": "external" } ], "gene_names_uniprotkb": "LOC100535969", "gene_names_refseq": "LOC100535969", "protein_names_uniprotkb": "Transcriptional-regulating factor 1 isoform X1", "protein_names_refseq": "transcriptional-regulating factor 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100535969)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HQC8;A0AC58HQD1", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005667 transcription regulator complex;GO:0000118 histone deacetylase complex;GO:0005654 nucleoplasm", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AIN3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AIR2-1", "uniprot_id": [ { "id": "A0A8M3AIR2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AIR2", "type": "external" } ], "mass": 53420.0, "length": 471, "protein_name": "Zinc finger and BTB domain-containing protein 32", "gene_name": "zbtb32", "organism": "Zebrafish", "refseq_name": "zinc finger and BTB domain-containing protein 32", "refseq_ac": [ { "id": "XP_009290149", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290149", "type": "external" } ], "gene_names_uniprotkb": "zbtb32", "gene_names_refseq": "zbtb32", "protein_names_uniprotkb": "Zinc finger and BTB domain-containing protein 32", "protein_names_refseq": "zinc finger and BTB domain-containing protein 32", "tax_id": 7955, "disease": "", "pathway": " (dre:101885704)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005654 nucleoplasm", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0002682 regulation of immune system process;GO:0001817 regulation of cytokine production", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AIR2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AIT0-1", "uniprot_id": [ { "id": "A0A8M3AIT0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AIT0", "type": "external" } ], "mass": 72622.0, "length": 620, "protein_name": "Uncharacterized protein map7a isoform X1", "gene_name": "map7a", "organism": "Zebrafish", "refseq_name": "uncharacterized protein map7a isoform X1", "refseq_ac": [ { "id": "XP_009291227", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291227", "type": "external" } ], "gene_names_uniprotkb": "map7a", "gene_names_refseq": "map7a", "protein_names_uniprotkb": "Uncharacterized protein map7a isoform X1", "protein_names_refseq": "uncharacterized protein map7a isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:571393)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0015630 microtubule cytoskeleton", "go_biological_process": "GO:0000226 microtubule cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AIT0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AJ72-1", "uniprot_id": [ { "id": "A0A8M3AJ72_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AJ72", "type": "external" } ], "mass": 39783.0, "length": 345, "protein_name": "Ovarian cancer G-protein coupled receptor 1 isoform X1", "gene_name": "gpr68", "organism": "Zebrafish", "refseq_name": "ovarian cancer G-protein coupled receptor 1 isoform X1", "refseq_ac": [ { "id": "XP_009291499", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291499", "type": "external" } ], "gene_names_uniprotkb": "gpr68", "gene_names_refseq": "gpr68", "protein_names_uniprotkb": "Ovarian cancer G-protein coupled receptor 1 isoform X1", "protein_names_refseq": "ovarian cancer G-protein coupled receptor 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:799203)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0010042 response to manganese ion;GO:0010447 response to acidic pH;GO:0071467 cellular response to pH;GO:0032025 response to cobalt ion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AJ72-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARL9-1", "uniprot_id": [ { "id": "A0A8M3ARL9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARL9", "type": "external" } ], "mass": 51047.0, "length": 463, "protein_name": "Solute carrier family 35 member F4 isoform X1", "gene_name": "slc35f4", "organism": "Zebrafish", "refseq_name": "solute carrier family 35 member F4 isoform X1", "refseq_ac": [ { "id": "XP_009291533", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291533", "type": "external" } ], "gene_names_uniprotkb": "slc35f4", "gene_names_refseq": "slc35f4", "protein_names_uniprotkb": "Solute carrier family 35 member F4 isoform X1", "protein_names_refseq": "solute carrier family 35 member F4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100001581)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARL9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AJE6-1", "uniprot_id": [ { "id": "A0A8M3AJE6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AJE6", "type": "external" } ], "mass": 26599.0, "length": 232, "protein_name": "small monomeric GTPase", "gene_name": "rabl2", "organism": "Zebrafish", "refseq_name": "RAB, member of RAS oncogene family-like 2 isoform X1", "refseq_ac": [ { "id": "XP_009291694", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291694", "type": "external" } ], "gene_names_uniprotkb": "rabl2; si:dkeyp-1h4.2", "gene_names_refseq": "rabl2; si:dkeyp-1h4.2", "protein_names_uniprotkb": "small monomeric GTPase; 3.6.5.2", "protein_names_refseq": "RAB, member of RAS oncogene family-like 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561568)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "20198855;30733854;36802443", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.6.5.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.2", "type": "external" }, { "id": "3.6.5.3", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.3", "type": "external" }, { "id": "3.6.5.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.5", "type": "external" }, { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.5.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.-", "type": "external" }, { "id": "3.6.1.-", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.-", "type": "external" }, { "id": "3.6.5.4", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.5.4", "type": "external" } ], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "GO:0012505 endomembrane system;GO:0005929 cilium", "go_biological_process": "GO:0006886 intracellular protein transport;GO:0060271 cilium assembly;GO:0007018 microtubule-based movement", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M3AJE6-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AJG4-1", "uniprot_id": [ { "id": "A0A8M3AJG4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AJG4", "type": "external" } ], "mass": 71757.0, "length": 652, "protein_name": "B-cell receptor CD22", "gene_name": "si:dkey-33i11.1", "organism": "Zebrafish", "refseq_name": "B-cell receptor CD22", "refseq_ac": [ { "id": "XP_009290914", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290914", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-33i11.1", "gene_names_refseq": "si:dkey-33i11.1", "protein_names_uniprotkb": "B-cell receptor CD22", "protein_names_refseq": "B-cell receptor CD22", "tax_id": 7955, "disease": "", "pathway": " (dre:569162)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009290975.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HHZ4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AJI1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AJK5-1", "uniprot_id": [ { "id": "A0A8M3AJK5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AJK5", "type": "external" } ], "mass": 21426.0, "length": 184, "protein_name": "Epithelial membrane protein 1", "gene_name": "emp1a", "organism": "Zebrafish", "refseq_name": "epithelial membrane protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005160088", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005160088", "type": "external" } ], "gene_names_uniprotkb": "emp1a; emp1; si:ch73-90k17.2", "gene_names_refseq": "emp1; si:ch73-90k17.2", "protein_names_uniprotkb": "Epithelial membrane protein 1", "protein_names_refseq": "epithelial membrane protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100318165)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "27189481;32240749;32691447", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. 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This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AJY6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AJZ3-1", "uniprot_id": [ { "id": "A0A8M3AJZ3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AJZ3", "type": "external" } ], "mass": 81408.0, "length": 720, "protein_name": "HEAT repeat-containing protein 4", "gene_name": "heatr4", "organism": "Zebrafish", "refseq_name": "HEAT repeat-containing protein 4", "refseq_ac": [ { "id": "XP_009291427", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291427", "type": "external" } ], "gene_names_uniprotkb": "heatr4", "gene_names_refseq": "heatr4", "protein_names_uniprotkb": "HEAT repeat-containing protein 4", "protein_names_refseq": "HEAT repeat-containing protein 4", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009291427.1. 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This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016301 kinase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AKJ2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AKJ7-1", "uniprot_id": [ { "id": "A0A8M3AKJ7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AKJ7", "type": "external" } ], "mass": 95117.0, "length": 839, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101886669", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009300147", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300147", "type": "external" } ], "gene_names_uniprotkb": "LOC101886669", "gene_names_refseq": "LOC101886669", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886669)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AKJ7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AKK5-1", "uniprot_id": [ { "id": "A0A8M3AKK5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AKK5", "type": "external" } ], "mass": 26105.0, "length": 238, "protein_name": "Transmembrane protein 91 isoform X1", "gene_name": "tmem91", "organism": "Zebrafish", "refseq_name": "transmembrane protein 91 isoform X1", "refseq_ac": [ { "id": "XP_009292063", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292063", "type": "external" } ], "gene_names_uniprotkb": "tmem91", "gene_names_refseq": "tmem91", "protein_names_uniprotkb": "Transmembrane protein 91 isoform X1", "protein_names_refseq": "transmembrane protein 91 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101885207)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HVV1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AKK5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AL46-1", "uniprot_id": [ { "id": "A0A8M3AL46_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AL46", "type": "external" } ], "mass": 18137.0, "length": 160, "protein_name": "Uncharacterized protein", "gene_name": "LOC103909362", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009293287", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293287", "type": "external" } ], "gene_names_uniprotkb": "LOC103909362", "gene_names_refseq": "LOC103909362", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103909362)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AL46-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AL62-1", "uniprot_id": [ { "id": "A0A8M3AL62_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AL62", "type": "external" } ], "mass": 47238.0, "length": 416, "protein_name": "Uncharacterized protein im:7160358", "gene_name": "im:7160358", "organism": "Zebrafish", "refseq_name": "uncharacterized protein im:7160358", "refseq_ac": [ { "id": "XP_009293350", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293350", "type": "external" } ], "gene_names_uniprotkb": "im:7160358", "gene_names_refseq": "im:7160358", "protein_names_uniprotkb": "Uncharacterized protein im:7160358", "protein_names_refseq": "uncharacterized protein im:7160358", "tax_id": 7955, "disease": "transient neonatal diabetes mellitus 1 (Disease Ontology:DOID:0061173)", "pathway": " (dre:101884191)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045944 positive regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AL62-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AL87-1", "uniprot_id": [ { "id": "A0A8M3AL87_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AL87", "type": "external" } ], "mass": 52875.0, "length": 475, "protein_name": "4.2.99.18; Aprataxin and PNK-like factor", "gene_name": "aplf", "organism": "Zebrafish", "refseq_name": "aprataxin and PNK-like factor", "refseq_ac": [ { "id": "NP_001353181", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001353181", "type": "external" } ], "gene_names_uniprotkb": "aplf; si:ch1073-147h9.1; zgc:165656", "gene_names_refseq": "aplf; si:ch1073-147h9.1; zgc:165656", "protein_names_uniprotkb": "4.2.99.18; Aprataxin and PNK-like factor", "protein_names_refseq": "aprataxin and PNK-like factor", "tax_id": 7955, "disease": "", "pathway": " (dre:101884102)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "28687732;39089191", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GDQH01018574.1, GFIL01045984.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505371, SAMEA3505390 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On or before Sep 27, 2018 this sequence version replaced NP_001099159.1, XP_009292736.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JG32", "ec_number_list": [], "go_molecular_function": "GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity;GO:0008408 3'-5' exonuclease activity;GO:0140078 class I DNA-(apurinic or apyrimidinic site) endonuclease activity", "go_cellular_component": "GO:0005634 nucleus;GO:0035861 site of double-strand break", "go_biological_process": "GO:0006302 double-strand break repair", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M3AL87-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AL91-1", "uniprot_id": [ { "id": "A0A8M3AL91_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AL91", "type": "external" } ], "mass": 295774.0, "length": 2679, "protein_name": "Uncharacterized protein crybg2 isoform X1", "gene_name": "crybg2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein crybg2 isoform X1", "refseq_ac": [ { "id": "XP_009292755", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292755", "type": "external" } ], "gene_names_uniprotkb": "crybg2", "gene_names_refseq": "crybg2", "protein_names_uniprotkb": "Uncharacterized protein crybg2 isoform X1", "protein_names_refseq": "uncharacterized protein crybg2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:569677)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AL91-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ALC1-1", "uniprot_id": [ { "id": "A0A8M3ALC1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ALC1", "type": "external" } ], "mass": 23014.0, "length": 204, "protein_name": "Uncharacterized protein", "gene_name": "LOC103909430", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009293513", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293513", "type": "external" } ], "gene_names_uniprotkb": "LOC103909430", "gene_names_refseq": "LOC103909430", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103909430)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ALC1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ALC4-1", "uniprot_id": [ { "id": "A0A8M3ALC4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ALC4", "type": "external" } ], "mass": 186647.0, "length": 1668, "protein_name": "Complement C3", "gene_name": "c3a.5", "organism": "Zebrafish", "refseq_name": "complement C3", "refseq_ac": [ { "id": "XP_009293521", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293521", "type": "external" } ], "gene_names_uniprotkb": "c3a.5", "gene_names_refseq": "c3a.5", "protein_names_uniprotkb": "Complement C3", "protein_names_refseq": "complement C3", "tax_id": 7955, "disease": "", "pathway": " (dre:100331492)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004866 endopeptidase inhibitor activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ALC4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ALF6-1", "uniprot_id": [ { "id": "A0A8M3ALF6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ALF6", "type": "external" } ], "mass": 85056.0, "length": 757, "protein_name": "BTB/POZ domain-containing protein KCTD1 isoform X1", "gene_name": "kctd1", "organism": "Zebrafish", "refseq_name": "BTB/POZ domain-containing protein KCTD1 isoform X1", "refseq_ac": [ { "id": "XP_009292901", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292901", "type": "external" } ], "gene_names_uniprotkb": "kctd1", "gene_names_refseq": "kctd1", "protein_names_uniprotkb": "BTB/POZ domain-containing protein KCTD1 isoform X1", "protein_names_refseq": "BTB/POZ domain-containing protein KCTD1 isoform X1", "tax_id": 7955, "disease": "scalp-ear-nipple syndrome (Disease Ontology:DOID:0111550)", "pathway": " (dre:555637)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009292901.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0051260 protein homooligomerization;GO:0014033 neural crest cell differentiation;GO:0060070 canonical Wnt signaling pathway;GO:0060037 pharyngeal system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ALF6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ALU5-1", "uniprot_id": [ { "id": "A0A8M3ALU5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ALU5", "type": "external" } ], "mass": 46702.0, "length": 426, "protein_name": "Zinc finger protein 410", "gene_name": "znf410", "organism": "Zebrafish", "refseq_name": "zinc finger protein 410 isoform X1", "refseq_ac": [ { "id": "XP_009293316", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293316", "type": "external" } ], "gene_names_uniprotkb": "znf410; zgc:77303", "gene_names_refseq": "zgc:77303; znf410", "protein_names_uniprotkb": "Zinc finger protein 410", "protein_names_refseq": "zinc finger protein 410 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Transcription factor that binds to the sequence motif 5'-CATCCCATAATA-3', and is specifically required to silence expression of fetal hemoglobin in adult erythroid cells. Prevents expression of fetal hemoglobin genes HBG1 and HBG2 through CHD4: acts as a direct transcriptional activator of CHD4, a central component of the NuRD complex that represses transcription of fetal hemoglobin genes HBG1 and HBG2 in erythroid cells. May also activate transcription of matrix-remodeling genes such as MMP1 during fibroblast senescence. May activate transcription of the gap junction gene GJC1, perhaps in response to increasing glucose. However, recent studies suggest that ZNF410 is dedicated to regulate expression of a single gene: CHD4., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58I298;A0AC58I2A5", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0043565 sequence-specific DNA binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ALU5-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ALZ3-1", "uniprot_id": [ { "id": "A0A8M3ALZ3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ALZ3", "type": "external" } ], "mass": 93901.0, "length": 817, "protein_name": "Uncharacterized protein si:dkey-1b17.9", "gene_name": "si:dkey-1b17.9", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-1b17.9", "refseq_ac": [ { "id": "XP_009294085", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294085", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-1b17.9", "gene_names_refseq": "si:dkey-1b17.9", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-1b17.9", "protein_names_refseq": "uncharacterized protein si:dkey-1b17.9", "tax_id": 7955, "disease": "", "pathway": " (dre:100329489)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009294085.1. COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ALZ3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AM44-1", "uniprot_id": [ { "id": "A0A8M3AM44_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AM44", "type": "external" } ], "mass": 27563.0, "length": 246, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC103909543", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009294353", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294353", "type": "external" } ], "gene_names_uniprotkb": "LOC103909543", "gene_names_refseq": "LOC103909543", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:103909543)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AM44-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AM48-1", "uniprot_id": [ { "id": "A0A8M3AM48_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AM48", "type": "external" } ], "mass": 54794.0, "length": 492, "protein_name": "B-cell receptor CD22-like", "gene_name": "LOC101882982", "organism": "Zebrafish", "refseq_name": "B-cell receptor CD22-like", "refseq_ac": [ { "id": "XP_009293582", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293582", "type": "external" } ], "gene_names_uniprotkb": "LOC101882982", "gene_names_refseq": "LOC101882982", "protein_names_uniprotkb": "B-cell receptor CD22-like", "protein_names_refseq": "B-cell receptor CD22-like", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009293582.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G0G7;A0AC58G0L7", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AM48-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AMJ0-1", "uniprot_id": [ { "id": "A0A8M3AMJ0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AMJ0", "type": "external" } ], "mass": 101479.0, "length": 924, "protein_name": "Phosphofurin acidic cluster sorting protein 2 isoform X4", "gene_name": "si:ch211-126j24.1", "organism": "Zebrafish", "refseq_name": "phosphofurin acidic cluster sorting protein 2 isoform X4", "refseq_ac": [ { "id": "XP_009294811", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294811", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-126j24.1", "gene_names_refseq": "si:ch211-126j24.1", "protein_names_uniprotkb": "Phosphofurin acidic cluster sorting protein 2 isoform X4", "protein_names_refseq": "phosphofurin acidic cluster sorting protein 2 isoform X4", "tax_id": 7955, "disease": "", "pathway": " (dre:571137)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009294811.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0044325 transmembrane transporter binding", "go_cellular_component": "", "go_biological_process": "GO:0072659 protein localization to plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AMJ0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AMP1-1", "uniprot_id": [ { "id": "A0A8M3AMP1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AMP1", "type": "external" } ], "mass": 58140.0, "length": 495, "protein_name": "Uncharacterized protein znf1167", "gene_name": "znf1167", "organism": "Zebrafish", "refseq_name": "uncharacterized protein znf1167", "refseq_ac": [ { "id": "XP_009294078", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294078", "type": "external" } ], "gene_names_uniprotkb": "znf1167", "gene_names_refseq": "znf1167", "protein_names_uniprotkb": "Uncharacterized protein znf1167", "protein_names_refseq": "uncharacterized protein znf1167", "tax_id": 7955, "disease": "", "pathway": " (dre:100034441)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AMP1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AMQ0-1", "uniprot_id": [ { "id": "A0A8M3AMQ0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AMQ0", "type": "external" } ], "mass": 39405.0, "length": 340, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC100535676", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009294100", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294100", "type": "external" } ], "gene_names_uniprotkb": "LOC100535676", "gene_names_refseq": "LOC100535676", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IFM4", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0042802 identical protein binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AMQ0-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AMX0-1", "uniprot_id": [ { "id": "A0A8M3AMX0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AMX0", "type": "external" } ], "mass": 27389.0, "length": 242, "protein_name": "Microfibril-associated glycoprotein 4-like", "gene_name": "LOC555374", "organism": "Zebrafish", "refseq_name": "microfibril-associated glycoprotein 4-like", "refseq_ac": [ { "id": "XP_009294451", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294451", "type": "external" } ], "gene_names_uniprotkb": "LOC555374", "gene_names_refseq": "LOC555374", "protein_names_uniprotkb": "Microfibril-associated glycoprotein 4-like", "protein_names_refseq": "microfibril-associated glycoprotein 4-like", "tax_id": 7955, "disease": "", "pathway": " (dre:555374)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0031012 extracellular matrix", "go_biological_process": "GO:0048251 elastic fiber assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AMX0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AN55-1", "uniprot_id": [ { "id": "A0A8M3AN55_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AN55", "type": "external" } ], "mass": 22225.0, "length": 196, "protein_name": "Ciliary microtubule-associated protein 3", "gene_name": "LOC110437716", "organism": "Zebrafish", "refseq_name": "ciliary microtubule-associated protein 3", "refseq_ac": [ { "id": "XP_009295291", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295291", "type": "external" } ], "gene_names_uniprotkb": "LOC110437716", "gene_names_refseq": "LOC110437716", "protein_names_uniprotkb": "Ciliary microtubule-associated protein 3", "protein_names_refseq": "ciliary microtubule-associated protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:110437716)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295291.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008092 cytoskeletal protein binding", "go_cellular_component": "", "go_biological_process": "GO:0031344 regulation of cell projection organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AN55-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANB4-1", "uniprot_id": [ { "id": "A0A8M3ANB4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANB4", "type": "external" } ], "mass": 33399.0, "length": 306, "protein_name": "Uncharacterized protein", "gene_name": "LOC101884517", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009295414", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295414", "type": "external" } ], "gene_names_uniprotkb": "LOC101884517", "gene_names_refseq": "LOC101884517", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101884517)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295414.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IMS3;A0AC58IMV9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANB4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANB5-1", "uniprot_id": [ { "id": "A0A8M3ANB5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANB5", "type": "external" } ], "mass": 49353.0, "length": 435, "protein_name": "2-epi-5-epi-valiolone synthase isoform X1", "gene_name": "LOC100000365", "organism": "Zebrafish", "refseq_name": "2-epi-5-epi-valiolone synthase isoform X1", "refseq_ac": [ { "id": "XP_009294834", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294834", "type": "external" } ], "gene_names_uniprotkb": "LOC100000365", "gene_names_refseq": "LOC100000365", "protein_names_uniprotkb": "2-epi-5-epi-valiolone synthase isoform X1", "protein_names_refseq": "2-epi-5-epi-valiolone synthase isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100000365)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009294834.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0000166 nucleotide binding;GO:0016829 lyase activity", "go_cellular_component": "", "go_biological_process": "GO:0017000 antibiotic biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANB5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANC0-1", "uniprot_id": [ { "id": "A0A8M3ANC0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANC0", "type": "external" } ], "mass": 155653.0, "length": 1388, "protein_name": "NACHT, LRR and PYD domains-containing protein 3 isoform X1", "gene_name": "si:ch73-168d20.1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "si:ch73-168d20.1", "gene_names_refseq": "", "protein_names_uniprotkb": "NACHT, LRR and PYD domains-containing protein 3 isoform X1", "protein_names_refseq": "", "tax_id": 7955, "disease": "metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208); CINCA Syndrome (Disease Ontology:DOID:0090029); familial cold autoinflammatory syndrome 1 (Disease Ontology:DOID:0090062); alcoholic hepatitis (Disease Ontology:DOID:12351); myocardial infarction (Disease Ontology:DOID:5844)", "pathway": " (dre:795914)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 5, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANC0-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANC7-1", "uniprot_id": [ { "id": "A0A8M3ANC7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANC7", "type": "external" } ], "mass": 36680.0, "length": 331, "protein_name": "Uncharacterized protein si:ch1073-59l16.1 isoform X1", "gene_name": "si:ch1073-59l16.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch1073-59l16.1 isoform X1", "refseq_ac": [ { "id": "XP_009295478", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295478", "type": "external" } ], "gene_names_uniprotkb": "si:ch1073-59l16.1", "gene_names_refseq": "si:ch1073-59l16.1", "protein_names_uniprotkb": "Uncharacterized protein si:ch1073-59l16.1 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch1073-59l16.1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884935)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANC7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANE1-1", "uniprot_id": [ { "id": "A0A8M3ANE1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANE1", "type": "external" } ], "mass": 76333.0, "length": 666, "protein_name": "Coiled-coil domain-containing protein 13 isoform X1", "gene_name": "ccdc13", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 13 isoform X1", "refseq_ac": [ { "id": "XP_009294898", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294898", "type": "external" } ], "gene_names_uniprotkb": "ccdc13", "gene_names_refseq": "ccdc13", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 13 isoform X1", "protein_names_refseq": "coiled-coil domain-containing protein 13 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555345)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0034451 centriolar satellite", "go_biological_process": "GO:1905515 non-motile cilium assembly;GO:0031122 cytoplasmic microtubule organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANE1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANI8-1", "uniprot_id": [ { "id": "A0A8M3ANI8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANI8", "type": "external" } ], "mass": 16104.0, "length": 143, "protein_name": "Chemokine-like protein TAFA-4", "gene_name": "tafa4a", "organism": "Zebrafish", "refseq_name": "chemokine-like protein TAFA-4", "refseq_ac": [ { "id": "XP_009295026", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295026", "type": "external" } ], "gene_names_uniprotkb": "tafa4a; LOC103909673", "gene_names_refseq": "LOC103909673", "protein_names_uniprotkb": "Chemokine-like protein TAFA-4", "protein_names_refseq": "chemokine-like protein TAFA-4", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IKV7;A0AC58IKW1;A0AC58IKW8;A0AC58IKX4", "ec_number_list": [], "go_molecular_function": "GO:0048018 receptor ligand activity", "go_cellular_component": "GO:0005615 extracellular space", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANI8-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANJ4-1", "uniprot_id": [ { "id": "A0A8M3ANJ4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANJ4", "type": "external" } ], "mass": 83506.0, "length": 759, "protein_name": "CaM kinase-like vesicle-associated protein", "gene_name": "camkvl", "organism": "Zebrafish", "refseq_name": "caM kinase-like vesicle-associated, like isoform X1", "refseq_ac": [ { "id": "XP_009295052", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295052", "type": "external" } ], "gene_names_uniprotkb": "camkvl", "gene_names_refseq": "camkvl", "protein_names_uniprotkb": "CaM kinase-like vesicle-associated protein", "protein_names_refseq": "caM kinase-like vesicle-associated, like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:553431)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;27615194", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Does not appear to have detectable kinase activity., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004672 protein kinase activity;GO:0005516 calmodulin binding;GO:0005524 ATP binding", "go_cellular_component": "GO:0045202 synapse;GO:0030659 cytoplasmic vesicle membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M3ANJ4-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANK0-1", "uniprot_id": [ { "id": "A0A8M3ANK0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANK0", "type": "external" } ], "mass": 35657.0, "length": 315, "protein_name": "Uncharacterized protein si:ch211-161h7.5", "gene_name": "si:ch211-161h7.5", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-161h7.5", "refseq_ac": [ { "id": "XP_009295685", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295685", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-161h7.5", "gene_names_refseq": "si:ch211-161h7.5", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-161h7.5", "protein_names_refseq": "uncharacterized protein si:ch211-161h7.5", "tax_id": 7955, "disease": "", "pathway": " (dre:569866)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009295685.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANK0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANQ6-1", "uniprot_id": [ { "id": "A0A8M3ANQ6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANQ6", "type": "external" } ], "mass": 89888.0, "length": 801, "protein_name": "Cyclic nucleotide-gated channel beta-3 isoform X1", "gene_name": "cngb3.2", "organism": "Zebrafish", "refseq_name": "cyclic nucleotide-gated channel beta-3 isoform X1", "refseq_ac": [ { "id": "XP_009295832", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295832", "type": "external" } ], "gene_names_uniprotkb": "cngb3.2", "gene_names_refseq": "cngb3.2", "protein_names_uniprotkb": "Cyclic nucleotide-gated channel beta-3 isoform X1", "protein_names_refseq": "cyclic nucleotide-gated channel beta-3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:562466)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_009295832.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "2.7.11.1", "url": "https://www.rhea-db.org/rhea/?query=ec:2.7.11.1", "type": "external" }, { "id": "1.5.1.2", "url": "https://www.rhea-db.org/rhea/?query=ec:1.5.1.2", "type": "external" } ], "go_molecular_function": "GO:0005223 intracellularly cGMP-activated cation channel activity;GO:0005222 intracellularly cAMP-activated cation channel activity;GO:0030553 cGMP binding;GO:0005221 intracellularly cyclic nucleotide-activated monoatomic cation channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0001750 photoreceptor outer segment;GO:0017071 intracellular cyclic nucleotide activated cation channel complex", "go_biological_process": "GO:0007601 visual perception;GO:0098655 monoatomic cation transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANQ6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANQ9-1", "uniprot_id": [ { "id": "A0A8M3ANQ9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANQ9", "type": "external" } ], "mass": 32240.0, "length": 291, "protein_name": "RNA-binding Raly-like protein isoform X1", "gene_name": "LOC100330501", "organism": "Zebrafish", "refseq_name": "RNA-binding Raly-like protein isoform X1", "refseq_ac": [ { "id": "XP_009295844", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295844", "type": "external" } ], "gene_names_uniprotkb": "LOC100330501", "gene_names_refseq": "LOC100330501", "protein_names_uniprotkb": "RNA-binding Raly-like protein isoform X1", "protein_names_refseq": "RNA-binding Raly-like protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100330501)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295844.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IS85;A0AC58IS93;A0AC58ISB0", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANQ9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANS5-1", "uniprot_id": [ { "id": "A0A8M3ANS5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANS5", "type": "external" } ], "mass": 38616.0, "length": 351, "protein_name": "UDP-N-acetylglucosamine transporter TMEM241", "gene_name": "slc35d4", "organism": "Zebrafish", "refseq_name": "UDP-N-acetylglucosamine transporter TMEM241", "refseq_ac": [ { "id": "XP_009295883", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295883", "type": "external" } ], "gene_names_uniprotkb": "slc35d4; tmem241", "gene_names_refseq": "tmem241", "protein_names_uniprotkb": "UDP-N-acetylglucosamine transporter TMEM241", "protein_names_refseq": "UDP-N-acetylglucosamine transporter TMEM241", "tax_id": 7955, "disease": "", "pathway": " (dre:101885957)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295883.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANS5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANV7-1", "uniprot_id": [ { "id": "A0A8M3ANV7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANV7", "type": "external" } ], "mass": 82119.0, "length": 748, "protein_name": "von Willebrand factor A domain-containing protein 5A", "gene_name": "LOC103909810", "organism": "Zebrafish", "refseq_name": "von Willebrand factor A domain-containing protein 5A", "refseq_ac": [ { "id": "XP_009296020", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296020", "type": "external" } ], "gene_names_uniprotkb": "LOC103909810", "gene_names_refseq": "LOC103909810", "protein_names_uniprotkb": "von Willebrand factor A domain-containing protein 5A", "protein_names_refseq": "von Willebrand factor A domain-containing protein 5A", "tax_id": 7955, "disease": "", "pathway": " (dre:103909810)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M3ANV7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANZ1-1", "uniprot_id": [ { "id": "A0A8M3ANZ1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANZ1", "type": "external" } ], "mass": 24262.0, "length": 218, "protein_name": "Uncharacterized protein", "gene_name": "LOC101887009", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009295393", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295393", "type": "external" } ], "gene_names_uniprotkb": "LOC101887009", "gene_names_refseq": "LOC101887009", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101887009)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295393.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANZ1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AP47-1", "uniprot_id": [ { "id": "A0A8M3AP47_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AP47", "type": "external" } ], "mass": 94887.0, "length": 848, "protein_name": "Peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1", "gene_name": "ppargc1b", "organism": "Zebrafish", "refseq_name": "peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1", "refseq_ac": [ { "id": "XP_009289336", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289336", "type": "external" } ], "gene_names_uniprotkb": "ppargc1b", "gene_names_refseq": "ppargc1b", "protein_names_uniprotkb": "Peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1", "protein_names_refseq": "peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1", "tax_id": 7955, "disease": "metabolic dysfunction and alcohol associated liver disease (Disease Ontology:DOID:0070508); metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208); obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:555906)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003713 transcription coactivator activity;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0097009 energy homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AP47-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AP57-1", "uniprot_id": [ { "id": "A0A8M3AP57_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AP57", "type": "external" } ], "mass": 114051.0, "length": 1032, "protein_name": "Ankyrin repeat and BTB/POZ domain-containing protein 2", "gene_name": "abtb2b", "organism": "Zebrafish", "refseq_name": "ankyrin repeat and BTB/POZ domain-containing protein 2", "refseq_ac": [ { "id": "XP_021329554", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329554", "type": "external" } ], "gene_names_uniprotkb": "abtb2b", "gene_names_refseq": "abtb2b", "protein_names_uniprotkb": "Ankyrin repeat and BTB/POZ domain-containing protein 2", "protein_names_refseq": "ankyrin repeat and BTB/POZ domain-containing protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100007078)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in the initiation of hepatocyte growth., [UniProtKB, UniProtKB]; May support cell-type-specific synaptic function., [UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "F1QLH2", "ec_number_list": [], "go_molecular_function": "GO:0046982 protein heterodimerization activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AP57-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APA9-1", "uniprot_id": [ { "id": "A0A8M3APA9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APA9", "type": "external" } ], "mass": 63299.0, "length": 577, "protein_name": "Leucine-rich repeat-containing protein 31 isoform X1", "gene_name": "lrrc31", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat-containing protein 31 isoform X1", "refseq_ac": [ { "id": "XP_009295766", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295766", "type": "external" } ], "gene_names_uniprotkb": "lrrc31", "gene_names_refseq": "lrrc31", "protein_names_uniprotkb": "Leucine-rich repeat-containing protein 31 isoform X1", "protein_names_refseq": "leucine-rich repeat-containing protein 31 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556343)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295766.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APA9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APB9-1", "uniprot_id": [ { "id": "A0A8M3APB9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APB9", "type": "external" } ], "mass": 73791.0, "length": 649, "protein_name": "RING finger protein 145", "gene_name": "rnf145a", "organism": "Zebrafish", "refseq_name": "RING finger protein 145 isoform X1", "refseq_ac": [ { "id": "XP_005157379", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005157379", "type": "external" } ], "gene_names_uniprotkb": "rnf145a", "gene_names_refseq": "rnf145a", "protein_names_uniprotkb": "RING finger protein 145", "protein_names_refseq": "RING finger protein 145 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:565986)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "E7FA30", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0016020 membrane;GO:0012505 endomembrane system", "go_biological_process": "GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0036503 ERAD pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APB9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APC8-1", "uniprot_id": [ { "id": "A0A8M3APC8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APC8", "type": "external" } ], "mass": 86358.0, "length": 752, "protein_name": "AIP/AIPL N-terminal FKBP-type PPIase domain-containing protein", "gene_name": "LOC100534741", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009289498", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289498", "type": "external" } ], "gene_names_uniprotkb": "LOC100534741", "gene_names_refseq": "LOC100534741", "protein_names_uniprotkb": "AIP/AIPL N-terminal FKBP-type PPIase domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:100534741)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003755 peptidyl-prolyl cis-trans isomerase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APC8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APE8-1", "uniprot_id": [ { "id": "A0A8M3APE8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APE8", "type": "external" } ], "mass": 16575.0, "length": 149, "protein_name": "Protein SPMIP2", "gene_name": "spmip2", "organism": "Zebrafish", "refseq_name": "protein SPMIP2", "refseq_ac": [ { "id": "XP_009289566", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289566", "type": "external" } ], "gene_names_uniprotkb": "spmip2", "gene_names_refseq": "spmip2", "protein_names_uniprotkb": "Protein SPMIP2", "protein_names_refseq": "protein SPMIP2", "tax_id": 7955, "disease": "", "pathway": " (dre:103908779)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_009289566.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APE8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APF3-1", "uniprot_id": [ { "id": "A0A8M3APF3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APF3", "type": "external" } ], "mass": 124037.0, "length": 1135, "protein_name": "NLR family CARD domain-containing protein 3", "gene_name": "nlrc3", "organism": "Zebrafish", "refseq_name": "NLR family CARD domain-containing protein 3", "refseq_ac": [ { "id": "XP_009295904", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295904", "type": "external" } ], "gene_names_uniprotkb": "nlrc3", "gene_names_refseq": "nlrc3", "protein_names_uniprotkb": "NLR family CARD domain-containing protein 3", "protein_names_refseq": "NLR family CARD domain-containing protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:110437718)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APF3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APG7-1", "uniprot_id": [ { "id": "A0A8M3APG7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APG7", "type": "external" } ], "mass": 32222.0, "length": 272, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC103909796", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009295959", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295959", "type": "external" } ], "gene_names_uniprotkb": "LOC103909796", "gene_names_refseq": "LOC103909796", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:103909796)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APG7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APK9-1", "uniprot_id": [ { "id": "A0A8M3APK9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APK9", "type": "external" } ], "mass": 521845.0, "length": 4587, "protein_name": "Sacsin isoform X1", "gene_name": "sacs", "organism": "Zebrafish", "refseq_name": "sacsin isoform X1", "refseq_ac": [ { "id": "XP_009289776", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289776", "type": "external" } ], "gene_names_uniprotkb": "sacs", "gene_names_refseq": "sacs", "protein_names_uniprotkb": "Sacsin isoform X1", "protein_names_refseq": "sacsin isoform X1", "tax_id": 7955, "disease": "Charlevoix-Saguenay spastic ataxia (Disease Ontology:DOID:0050946)", "pathway": " (dre:558150)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009289776.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030544 Hsp70 protein binding", "go_cellular_component": "", "go_biological_process": "GO:0060041 retina development in camera-type eye", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APK9-1", "record_type": "protein", "filter_code": "0000000.0000011.000100.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APN3-1", "uniprot_id": [ { "id": "A0A8M3APN3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APN3", "type": "external" } ], "mass": 99286.0, "length": 902, "protein_name": "Calcium-activated chloride channel regulator 1", "gene_name": "clca5.2", "organism": "Zebrafish", "refseq_name": "calcium-activated chloride channel regulator 1", "refseq_ac": [ { "id": "XP_009289819", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289819", "type": "external" } ], "gene_names_uniprotkb": "clca5.2", "gene_names_refseq": "clca5.2", "protein_names_uniprotkb": "Calcium-activated chloride channel regulator 1", "protein_names_refseq": "calcium-activated chloride channel regulator 1", "tax_id": 7955, "disease": "cystic fibrosis (Disease Ontology:DOID:1485); asthma (Disease Ontology:DOID:2841); chronic obstructive pulmonary disease (Disease Ontology:DOID:3083)", "pathway": " (dre:101886445)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_009289819.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APN3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APX1-1", "uniprot_id": [ { "id": "A0A8M3APX1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APX1", "type": "external" } ], "mass": 29407.0, "length": 264, "protein_name": "Paraneoplastic antigen Ma1 homolog", "gene_name": "LOC103909885", "organism": "Zebrafish", "refseq_name": "paraneoplastic antigen Ma1 homolog", "refseq_ac": [ { "id": "XP_009296477", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296477", "type": "external" } ], "gene_names_uniprotkb": "LOC103909885", "gene_names_refseq": "LOC103909885", "protein_names_uniprotkb": "Paraneoplastic antigen Ma1 homolog", "protein_names_refseq": "paraneoplastic antigen Ma1 homolog", "tax_id": 7955, "disease": "", "pathway": " (dre:103909885)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APX1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APX4-1", "uniprot_id": [ { "id": "A0A8M3APX4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APX4", "type": "external" } ], "mass": 133588.0, "length": 1223, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101882848", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009290004", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290004", "type": "external" } ], "gene_names_uniprotkb": "LOC101882848", "gene_names_refseq": "LOC101882848", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882848)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APX4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3APZ3-1", "uniprot_id": [ { "id": "A0A8M3APZ3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3APZ3", "type": "external" } ], "mass": 62136.0, "length": 538, "protein_name": "E3 ubiquitin/ISG15 ligase TRIM25-like", "gene_name": "LOC570079", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin/ISG15 ligase TRIM25-like", "refseq_ac": [ { "id": "XP_009297009", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297009", "type": "external" } ], "gene_names_uniprotkb": "LOC570079", "gene_names_refseq": "LOC570079", "protein_names_uniprotkb": "E3 ubiquitin/ISG15 ligase TRIM25-like", "protein_names_refseq": "E3 ubiquitin/ISG15 ligase TRIM25-like", "tax_id": 7955, "disease": "", "pathway": " (dre:570079)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009297009.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3APZ3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ11-1", "uniprot_id": [ { "id": "A0A8M3AQ11_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ11", "type": "external" } ], "mass": 82191.0, "length": 733, "protein_name": "Uncharacterized protein zmp:0000000906", "gene_name": "zmp:0000000906", "organism": "Zebrafish", "refseq_name": "uncharacterized protein zmp:0000000906", "refseq_ac": [ { "id": "XP_009297101", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297101", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000000906", "gene_names_refseq": "zmp:0000000906", "protein_names_uniprotkb": "Uncharacterized protein zmp:0000000906", "protein_names_refseq": "uncharacterized protein zmp:0000000906", "tax_id": 7955, "disease": "", "pathway": " (dre:100334082)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009297101.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQ11-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ39-1", "uniprot_id": [ { "id": "A0A8M3AQ39_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ39", "type": "external" } ], "mass": 168449.0, "length": 1565, "protein_name": "Ras-associated and pleckstrin homology domains-containing protein 1b isoform 1; Ras-associated and pleckstrin homology domains-containing protein 1b isoform X1", "gene_name": "raph1b", "organism": "Zebrafish", "refseq_name": "ras-associated and pleckstrin homology domains-containing protein 1b isoform 1", "refseq_ac": [ { "id": "NP_001352514", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001352514", "type": "external" } ], "gene_names_uniprotkb": "raph1b; sb:eu2484; si:dkey-1h24.3", "gene_names_refseq": "raph1b; sb:eu2484; si:dkey-1h24.3", "protein_names_uniprotkb": "Ras-associated and pleckstrin homology domains-containing protein 1b isoform 1; Ras-associated and pleckstrin homology domains-containing protein 1b isoform X1", "protein_names_refseq": "ras-associated and pleckstrin homology domains-containing protein 1b isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:560319)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12618376;21873635", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR26395015.1528757.1, SRR26395015.271743.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505391 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Sep 12, 2018 this sequence version replaced XP_009290141.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 9, "predicted_n_glycosites": 0, "predicted_o_glycosites": 9, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005829 cytosol;GO:0005856 cytoskeleton;GO:0005886 plasma membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0048858 cell projection morphogenesis;GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M3AQ39-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ58-1", "uniprot_id": [ { "id": "A0A8M3AQ58_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ58", "type": "external" } ], "mass": 52655.0, "length": 502, "protein_name": "Polymerase delta-interacting protein 3 isoform X1", "gene_name": "poldip3", "organism": "Zebrafish", "refseq_name": "polymerase delta-interacting protein 3 isoform X1", "refseq_ac": [ { "id": "XP_009297280", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297280", "type": "external" } ], "gene_names_uniprotkb": "poldip3", "gene_names_refseq": "poldip3", "protein_names_uniprotkb": "Polymerase delta-interacting protein 3 isoform X1", "protein_names_refseq": "polymerase delta-interacting protein 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100536140)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_009297280.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003729 mRNA binding;GO:0003723 RNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0016607 nuclear speck", "go_biological_process": "GO:0016973 poly(A)+ mRNA export from nucleus;GO:0051028 mRNA transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQ58-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ59-1", "uniprot_id": [ { "id": "A0A8M3AQ59_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ59", "type": "external" } ], "mass": 95075.0, "length": 837, "protein_name": "NACHT, LRR and PYD domains-containing protein 3 isoform X1", "gene_name": "si:dkey-121n8.5", "organism": "Zebrafish", "refseq_name": "NACHT, LRR and PYD domains-containing protein 3 isoform X1", "refseq_ac": [ { "id": "XP_009290199", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290199", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-121n8.5", "gene_names_refseq": "si:dkey-121n8.5", "protein_names_uniprotkb": "NACHT, LRR and PYD domains-containing protein 3 isoform X1", "protein_names_refseq": "NACHT, LRR and PYD domains-containing protein 3 isoform X1", "tax_id": 7955, "disease": "Muckle-Wells syndrome (Disease Ontology:DOID:0050854); metabolic dysfunction-associated steatotic liver disease (Disease Ontology:DOID:0080208); autosomal dominant nonsyndromic deafness 34 (Disease Ontology:DOID:0080270); CINCA Syndrome (Disease Ontology:DOID:0090029); familial cold autoinflammatory syndrome 1 (Disease Ontology:DOID:0090062); familial cold autoinflammatory syndrome 2 (Disease Ontology:DOID:0090063); alcoholic hepatitis (Disease Ontology:DOID:12351); urticaria (Disease Ontology:DOID:1555); myocardial infarction (Disease Ontology:DOID:5844); steatotic liver disease (Disease Ontology:DOID:9452)", "pathway": " (dre:108179100)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 10, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HDQ8", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQ59-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ80-1", "uniprot_id": [ { "id": "A0A8M3AQ80_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ80", "type": "external" } ], "mass": 51711.0, "length": 443, "protein_name": "Uncharacterized protein zmp:0000001003", "gene_name": "zmp:0000001003", "organism": "Zebrafish", "refseq_name": "uncharacterized protein zmp:0000001003", "refseq_ac": [ { "id": "XP_009297410", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297410", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000001003", "gene_names_refseq": "zmp:0000001003", "protein_names_uniprotkb": "Uncharacterized protein zmp:0000001003", "protein_names_refseq": "uncharacterized protein zmp:0000001003", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J110", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQ80-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQ86-1", "uniprot_id": [ { "id": "A0A8M3AQ86_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQ86", "type": "external" } ], "mass": 67570.0, "length": 604, "protein_name": "PEX5-related protein", "gene_name": "pex5lb", "organism": "Zebrafish", "refseq_name": "PEX5-related protein isoform X1", "refseq_ac": [ { "id": "XP_009297427", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297427", "type": "external" } ], "gene_names_uniprotkb": "pex5lb", "gene_names_refseq": "pex5lb", "protein_names_uniprotkb": "PEX5-related protein; PEX5-like protein; Peroxin-5-related protein; Tetratricopeptide repeat-containing Rab8b-interacting protein", "protein_names_refseq": "PEX5-related protein isoform X1", "tax_id": 7955, "disease": "peroxisomal biogenesis disorder (Disease Ontology:DOID:0080377); peroxisome biogenesis disorder 2A (Disease Ontology:DOID:0080477)", "pathway": " (dre:100332270)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Accessory subunit of hyperpolarization-activated cyclic nucleotide-gated (HCN) channels, regulating their cell-surface expression and cyclic nucleotide dependence., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005052 peroxisome matrix targeting signal-1 binding", "go_cellular_component": "GO:0005778 peroxisomal membrane;GO:0005829 cytosol;GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0016560 protein import into peroxisome matrix, docking", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQ86-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQA7-1", "uniprot_id": [ { "id": "A0A8M3AQA7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQA7", "type": "external" } ], "mass": 220172.0, "length": 1997, "protein_name": "Uncharacterized protein wizb isoform X1", "gene_name": "wizb", "organism": "Zebrafish", "refseq_name": "uncharacterized protein wizb isoform X1", "refseq_ac": [ { "id": "XP_009297507", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297507", "type": "external" } ], "gene_names_uniprotkb": "wizb", "gene_names_refseq": "wizb", "protein_names_uniprotkb": "Uncharacterized protein wizb isoform X1", "protein_names_refseq": "uncharacterized protein wizb isoform X1", "tax_id": 7955, "disease": "atherosclerosis (Disease Ontology:DOID:1936)", "pathway": " (dre:100001879)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQA7-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQB6-1", "uniprot_id": [ { "id": "A0A8M3AQB6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQB6", "type": "external" } ], "mass": 53936.0, "length": 475, "protein_name": "THAP-type domain-containing protein", "gene_name": "LOC101883330", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_005168153", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005168153", "type": "external" } ], "gene_names_uniprotkb": "LOC101883330", "gene_names_refseq": "LOC101883330", "protein_names_uniprotkb": "THAP-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101883330)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_005168153.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQB6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQD6-1", "uniprot_id": [ { "id": "A0A8M3AQD6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQD6", "type": "external" } ], "mass": 77661.0, "length": 731, "protein_name": "Uncharacterized protein si:dkeyp-77h1.4", "gene_name": "si:dkeyp-77h1.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkeyp-77h1.4", "refseq_ac": [ { "id": "XP_009290393", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290393", "type": "external" } ], "gene_names_uniprotkb": "si:dkeyp-77h1.4", "gene_names_refseq": "si:dkeyp-77h1.4", "protein_names_uniprotkb": "Uncharacterized protein si:dkeyp-77h1.4", "protein_names_refseq": "uncharacterized protein si:dkeyp-77h1.4", "tax_id": 7955, "disease": "", "pathway": " (dre:497302)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009290393.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 9, "predicted_n_glycosites": 0, "predicted_o_glycosites": 9, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 9, "binding_glycan_count": 0, "secondary_ac_list": "F1R3T1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response;GO:0007166 cell surface receptor signaling pathway;GO:0031295 T cell costimulation;GO:0042130 negative regulation of T cell proliferation;GO:0071222 cellular response to lipopolysaccharide", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQD6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQJ0-1", "uniprot_id": [ { "id": "A0A8M3AQJ0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQJ0", "type": "external" } ], "mass": 82397.0, "length": 729, "protein_name": "Phosphoinositide 3-kinase regulatory subunit 6", "gene_name": "pik3r6b", "organism": "Zebrafish", "refseq_name": "phosphoinositide 3-kinase regulatory subunit 6", "refseq_ac": [ { "id": "XP_009297697", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297697", "type": "external" } ], "gene_names_uniprotkb": "pik3r6b", "gene_names_refseq": "pik3r6b", "protein_names_uniprotkb": "Phosphoinositide 3-kinase regulatory subunit 6", "protein_names_refseq": "phosphoinositide 3-kinase regulatory subunit 6", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J287;A0AC58J290;A0AC58J292;A0AC58J293;A0AC58J2A0;A0AC58J2A4;A0AC58J2A8;A0AC58J2B1;A0AC58J2B2;A0AC58J2C1;F1QCV5;X1WDB6", "ec_number_list": [], "go_molecular_function": "GO:0046935 1-phosphatidylinositol-3-kinase regulator activity", "go_cellular_component": "GO:0005944 phosphatidylinositol 3-kinase complex, class IB;GO:0005942 phosphatidylinositol 3-kinase complex", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0042269 regulation of natural killer cell mediated cytotoxicity", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQJ0-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQJ2-1", "uniprot_id": [ { "id": "A0A8M3AQJ2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQJ2", "type": "external" } ], "mass": 51076.0, "length": 469, "protein_name": "Armadillo repeat-containing protein 6", "gene_name": "armc6", "organism": "Zebrafish", "refseq_name": "armadillo repeat-containing protein 6", "refseq_ac": [ { "id": "XP_009297218", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297218", "type": "external" } ], "gene_names_uniprotkb": "armc6", "gene_names_refseq": "armc6", "protein_names_uniprotkb": "Armadillo repeat-containing protein 6", "protein_names_refseq": "armadillo repeat-containing protein 6", "tax_id": 7955, "disease": "", "pathway": " (dre:555425)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0002244 hematopoietic progenitor cell differentiation;GO:0048513 animal organ development", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M3AQJ2-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQJ3-1", "uniprot_id": [ { "id": "A0A8M3AQJ3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQJ3", "type": "external" } ], "mass": 18938.0, "length": 165, "protein_name": "Sperm-associated microtubule inner protein 4", "gene_name": "spmip4", "organism": "Zebrafish", "refseq_name": "sperm-associated microtubule inner protein 4", "refseq_ac": [ { "id": "XP_009290545", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290545", "type": "external" } ], "gene_names_uniprotkb": "spmip4", "gene_names_refseq": "spmip4", "protein_names_uniprotkb": "Sperm-associated microtubule inner protein 4", "protein_names_refseq": "sperm-associated microtubule inner protein 4", "tax_id": 7955, "disease": "", "pathway": " (dre:103908922)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009297449.1. 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This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F6P2J8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0032588 trans-Golgi network membrane;GO:0005765 lysosomal membrane", "go_biological_process": "GO:0045055 regulated exocytosis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQN8-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQP1-1", "uniprot_id": [ { "id": "A0A8M3AQP1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQP1", "type": "external" } ], "mass": 16990.0, "length": 149, "protein_name": "LIM domain-containing protein 2 isoform X1", "gene_name": "limd2", "organism": "Zebrafish", "refseq_name": "LIM domain-containing protein 2 isoform X1", "refseq_ac": [ { "id": "XP_009297834", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297834", "type": "external" } ], "gene_names_uniprotkb": "limd2", "gene_names_refseq": "limd2", "protein_names_uniprotkb": "LIM domain-containing protein 2 isoform X1", "protein_names_refseq": "LIM domain-containing protein 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:560139)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "25014315;26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009297834.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0051015 actin filament binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0015629 actin cytoskeleton", "go_biological_process": "GO:0051017 actin filament bundle assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M3AQP1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQS6-1", "uniprot_id": [ { "id": "A0A8M3AQS6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQS6", "type": "external" } ], "mass": 32342.0, "length": 282, "protein_name": "Src-like-adapter isoform X1", "gene_name": "sla1b", "organism": "Zebrafish", "refseq_name": "src-like-adapter isoform X1", "refseq_ac": [ { "id": "XP_009290752", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290752", "type": "external" } ], "gene_names_uniprotkb": "sla1b", "gene_names_refseq": "sla1b", "protein_names_uniprotkb": "Src-like-adapter isoform X1", "protein_names_refseq": "src-like-adapter isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884146)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009290752.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001784 phosphotyrosine residue binding;GO:0005154 epidermal growth factor receptor binding", "go_cellular_component": "GO:0005654 nucleoplasm;GO:0005737 cytoplasm;GO:0005886 plasma membrane;GO:0008180 COP9 signalosome", "go_biological_process": "GO:0007165 signal transduction;GO:0043408 regulation of MAPK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQS6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQU2-1", "uniprot_id": [ { "id": "A0A8M3AQU2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQU2", "type": "external" } ], "mass": 217263.0, "length": 1974, "protein_name": "Zinc finger protein 40", "gene_name": "hivep3b", "organism": "Zebrafish", "refseq_name": "transcription factor HIVEP3", "refseq_ac": [ { "id": "XP_009290777", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290777", "type": "external" } ], "gene_names_uniprotkb": "hivep3b", "gene_names_refseq": "hivep3b", "protein_names_uniprotkb": "Zinc finger protein 40", "protein_names_refseq": "transcription factor HIVEP3", "tax_id": 7955, "disease": "", "pathway": " (dre:568037)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "F1QA26", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQU2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AQY4-1", "uniprot_id": [ { "id": "A0A8M3AQY4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AQY4", "type": "external" } ], "mass": 50857.0, "length": 462, "protein_name": "Sosondowah ankyrin repeat domain family Cb isoform X1", "gene_name": "sowahcb", "organism": "Zebrafish", "refseq_name": "sosondowah ankyrin repeat domain family Cb isoform X1", "refseq_ac": [ { "id": "XP_009298061", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298061", "type": "external" } ], "gene_names_uniprotkb": "sowahcb; zgc:158337", "gene_names_refseq": "sowahcb; zgc:158337", "protein_names_uniprotkb": "Sosondowah ankyrin repeat domain family Cb isoform X1", "protein_names_refseq": "sosondowah ankyrin repeat domain family Cb isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AQY4-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AR56-1", "uniprot_id": [ { "id": "A0A8M3AR56_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AR56", "type": "external" } ], "mass": 75246.0, "length": 701, "protein_name": "Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D", "gene_name": "si:dkey-14d8.21", "organism": "Zebrafish", "refseq_name": "scavenger receptor cysteine-rich type 1 protein M130", "refseq_ac": [ { "id": "XP_009298294", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298294", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-14d8.21", "gene_names_refseq": "si:dkey-14d8.21", "protein_names_uniprotkb": "Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D", "protein_names_refseq": "scavenger receptor cysteine-rich type 1 protein M130", "tax_id": 7955, "disease": "", "pathway": " (dre:558317)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009298294.1. COMPLETENESS: full length., [RefSeq]; Binds to extracellular matrix proteins. Binds to pathogen-associated molecular patterns (PAMPs) present on the cell walls of Gram-positive and Gram-negative bacteria and fungi, behaving as a pattern recognition receptor (PRR). Induces bacterial and fungal aggregation and subsequent inhibition of PAMP-induced cytokine release. Does not possess intrinsic bactericidal activity. May play a role in the innate defense and homeostasis of certain epithelial surfaces., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J993", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AR56-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AR64-1", "uniprot_id": [ { "id": "A0A8M3AR64_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AR64", "type": "external" } ], "mass": 79939.0, "length": 706, "protein_name": "Leucine-rich repeat neuronal protein 3", "gene_name": "lrrn3b", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat neuronal protein 3", "refseq_ac": [ { "id": "XP_009298331", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298331", "type": "external" } ], "gene_names_uniprotkb": "lrrn3b", "gene_names_refseq": "lrrn3b", "protein_names_uniprotkb": "Leucine-rich repeat neuronal protein 3", "protein_names_refseq": "leucine-rich repeat neuronal protein 3", "tax_id": 7955, "disease": "schizophrenia (Disease Ontology:DOID:5419)", "pathway": " (dre:100535105)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "H9GYJ3", "ec_number_list": [], "go_molecular_function": "GO:0038023 signaling receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AR64-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARI0-1", "uniprot_id": [ { "id": "A0A8M3ARI0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARI0", "type": "external" } ], "mass": 129521.0, "length": 1191, "protein_name": "Glutamate receptor-interacting protein 1 isoform X1", "gene_name": "grip1", "organism": "Zebrafish", "refseq_name": "glutamate receptor-interacting protein 1 isoform X1", "refseq_ac": [ { "id": "XP_009298419", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298419", "type": "external" } ], "gene_names_uniprotkb": "grip1; si:dkey-244b23.1; si:dkey-6a5.1", "gene_names_refseq": "grip1; si:dkey-244b23.1; si:dkey-6a5.1", "protein_names_uniprotkb": "Glutamate receptor-interacting protein 1 isoform X1", "protein_names_refseq": "glutamate receptor-interacting protein 1 isoform X1", "tax_id": 7955, "disease": "recessive dystrophic epidermolysis bullosa (Disease Ontology:DOID:0060642); Fraser syndrome (Disease Ontology:DOID:0090001); Fraser syndrome 3 (Disease Ontology:DOID:0111406); clubfoot (Disease Ontology:DOID:11836)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Controls the development of red pulp macrophages required for red blood cells recycling and iron homeostasis. Transcription factor that binds to the PU-box, a purine-rich DNA sequence (5'-GAGGA[AT]-3') that can act as a lymphoid-specific enhancer. 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This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARI1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARI6-1", "uniprot_id": [ { "id": "A0A8M3ARI6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARI6", "type": "external" } ], "mass": 111887.0, "length": 981, "protein_name": "Epithelial cell-transforming sequence 2 oncogene-like isoform X1", "gene_name": "ect2l", "organism": "Zebrafish", "refseq_name": "epithelial cell-transforming sequence 2 oncogene-like isoform X1", "refseq_ac": [ { "id": "XP_009291444", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291444", "type": "external" } ], "gene_names_uniprotkb": "ect2l", "gene_names_refseq": "ect2l", "protein_names_uniprotkb": "Epithelial cell-transforming sequence 2 oncogene-like isoform X1", "protein_names_refseq": "epithelial cell-transforming sequence 2 oncogene-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100332935)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARI6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARS7-1", "uniprot_id": [ { "id": "A0A8M3ARS7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARS7", "type": "external" } ], "mass": 52969.0, "length": 479, "protein_name": "Sialic acid-binding Ig-like lectin 13 isoform X1", "gene_name": "LOC101884710", "organism": "Zebrafish", "refseq_name": "sialic acid-binding Ig-like lectin 13 isoform X1", "refseq_ac": [ { "id": "XP_009298712", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298712", "type": "external" } ], "gene_names_uniprotkb": "LOC101884710", "gene_names_refseq": "LOC101884710", "protein_names_uniprotkb": "Sialic acid-binding Ig-like lectin 13 isoform X1", "protein_names_refseq": "sialic acid-binding Ig-like lectin 13 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J9Y7", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding;GO:0033691 sialic acid binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007155 cell adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARS7-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ART3-1", "uniprot_id": [ { "id": "A0A8M3ART3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ART3", "type": "external" } ], "mass": 32566.0, "length": 284, "protein_name": "Uncharacterized protein si:cabz01063885.1", "gene_name": "si:cabz01063885.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:cabz01063885.1", "refseq_ac": [ { "id": "XP_009299353", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299353", "type": "external" } ], "gene_names_uniprotkb": "si:cabz01063885.1", "gene_names_refseq": "si:cabz01063885.1", "protein_names_uniprotkb": "Uncharacterized protein si:cabz01063885.1", "protein_names_refseq": "uncharacterized protein si:cabz01063885.1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JEX3;A0AC58JEX4;A0AC58JEY4;A0AC58JEY6", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ART3-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARW0-1", "uniprot_id": [ { "id": "A0A8M3ARW0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARW0", "type": "external" } ], "mass": 31401.0, "length": 270, "protein_name": "Ciliary-associated calcium-binding coiled-coil protein 1", "gene_name": "cabcoco1", "organism": "Zebrafish", "refseq_name": "ciliary-associated calcium-binding coiled-coil protein 1", "refseq_ac": [ { "id": "NP_001170934", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001170934", "type": "external" } ], "gene_names_uniprotkb": "cabcoco1; zgc:194508", "gene_names_refseq": "cabcoco1; zgc:194508", "protein_names_uniprotkb": "Ciliary-associated calcium-binding coiled-coil protein 1", "protein_names_refseq": "ciliary-associated calcium-binding coiled-coil protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100004673)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC163235.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN01765705, SAMN06350654 [ECO:0000348] ##Evidence-Data-END## PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC163235.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AB32U2D5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M3ARW0-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARW2-1", "uniprot_id": [ { "id": "A0A8M3ARW2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARW2", "type": "external" } ], "mass": 116951.0, "length": 1081, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101883723", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_017211712", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017211712", "type": "external" } ], "gene_names_uniprotkb": "LOC101883723", "gene_names_refseq": "LOC101883723", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883723)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JNC0;A0AC58JNC5;A0AC58JNC8;A0AC58JND0;A0AC58JND1;A0AC58JNF4;A0AC58JNG4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARW2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARW7-1", "uniprot_id": [ { "id": "A0A8M3ARW7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARW7", "type": "external" } ], "mass": 34364.0, "length": 306, "protein_name": "Myb/SANT-like DNA-binding domain-containing protein", "gene_name": "LOC101883270", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_017211235", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017211235", "type": "external" } ], "gene_names_uniprotkb": "LOC101883270", "gene_names_refseq": "LOC101883270", "protein_names_uniprotkb": "Myb/SANT-like DNA-binding domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101883270)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARW7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARX7-1", "uniprot_id": [ { "id": "A0A8M3ARX7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARX7", "type": "external" } ], "mass": 140128.0, "length": 1253, "protein_name": "Matrin 3-like 1.1 isoform X1", "gene_name": "matr3l1.1; matr3l1.2", "organism": "Zebrafish", "refseq_name": "matrin 3-like 1.1 isoform X1", "refseq_ac": [ { "id": "XP_009289307", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289307", "type": "external" } ], "gene_names_uniprotkb": "matr3l1.1; matr3l1.2; MATR3; matr3l; si:bz1d10.1; si:bz1d10.2; wu:fb78d04; wu:fc09f04; wu:fe36a04", "gene_names_refseq": "matr3l1.1; si:bz1d10.2; wu:fb78d04; wu:fc09f04; wu:fe36a04", "protein_names_uniprotkb": "Matrin 3-like 1.1 isoform X1", "protein_names_refseq": "matrin 3-like 1.1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556124); (dre:556290)", "pathway_count": 2, "publication_count": 4, "publication_id_list": "16109975;25504979;27189481;30165106", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58H6C7", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M3ARX7-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ARY2-1", "uniprot_id": [ { "id": "A0A8M3ARY2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ARY2", "type": "external" } ], "mass": 103895.0, "length": 935, "protein_name": "Sushi domain-containing protein 1 isoform X1", "gene_name": "susd1", "organism": "Zebrafish", "refseq_name": "sushi domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_009299483", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299483", "type": "external" } ], "gene_names_uniprotkb": "susd1", "gene_names_refseq": "susd1", "protein_names_uniprotkb": "Sushi domain-containing protein 1 isoform X1", "protein_names_refseq": "sushi domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:569485)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009299483.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JNI7", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ARY2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AS18-1", "uniprot_id": [ { "id": "A0A8M3AS18_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AS18", "type": "external" } ], "mass": 33427.0, "length": 288, "protein_name": "Zinc finger MYM-type protein 1", "gene_name": "LOC101882592", "organism": "Zebrafish", "refseq_name": "zinc finger MYM-type protein 1", "refseq_ac": [ { "id": "XP_009291966", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291966", "type": "external" } ], "gene_names_uniprotkb": "LOC101882592", "gene_names_refseq": "LOC101882592", "protein_names_uniprotkb": "Zinc finger MYM-type protein 1", "protein_names_refseq": "zinc finger MYM-type protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882592)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046983 protein dimerization activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AS18-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AS23-1", "uniprot_id": [ { "id": "A0A8M3AS23_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AS23", "type": "external" } ], "mass": 79686.0, "length": 729, "protein_name": "Cdkn1a interacting zinc finger protein 1a isoform X1", "gene_name": "ciz1a", "organism": "Zebrafish", "refseq_name": "cdkn1a interacting zinc finger protein 1a isoform X1", "refseq_ac": [ { "id": "XP_009299400", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299400", "type": "external" } ], "gene_names_uniprotkb": "ciz1a; ciz1; si:ch73-213n7.1", "gene_names_refseq": "ciz1a; ciz1; si:ch73-213n7.1", "protein_names_uniprotkb": "Cdkn1a interacting zinc finger protein 1a isoform X1", "protein_names_refseq": "cdkn1a interacting zinc finger protein 1a isoform X1", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:103911032)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "26469318;27189481;37031448;40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.7, "record_id": "A0A8M3AS23-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ANF4-1", "uniprot_id": [ { "id": "A0A8M3ANF4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ANF4", "type": "external" } ], "mass": 118499.0, "length": 1061, "protein_name": "protein-tyrosine-phosphatase", "gene_name": "LOC569071", "organism": "Zebrafish", "refseq_name": "receptor-type tyrosine-protein phosphatase H isoform X1", "refseq_ac": [ { "id": "XP_009295554", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295554", "type": "external" } ], "gene_names_uniprotkb": "LOC569071", "gene_names_refseq": "LOC569071", "protein_names_uniprotkb": "protein-tyrosine-phosphatase; 3.1.3.48", "protein_names_refseq": "receptor-type tyrosine-protein phosphatase H isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:569071)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_009295554.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.1.3.16", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.16", "type": "external" }, { "id": "3.1.3.48", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.48", "type": "external" }, { "id": "3.1.3.2", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.2", "type": "external" }, { "id": "3.1.3.67", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.67", "type": "external" }, { "id": "3.1.3.27", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.27", "type": "external" }, { "id": "3.1.3.21", "url": "https://www.rhea-db.org/rhea/?query=ec:3.1.3.21", "type": "external" } ], "go_molecular_function": "GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0007165 signal transduction;GO:0007411 axon guidance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ANF4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZV3-1", "uniprot_id": [ { "id": "A0A8M3AZV3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZV3", "type": "external" } ], "mass": 261633.0, "length": 2423, "protein_name": "PDZ domain-containing protein 2 isoform X1", "gene_name": "pdzd2", "organism": "Zebrafish", "refseq_name": "PDZ domain-containing protein 2 isoform X1", "refseq_ac": [ { "id": "XP_003198698", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003198698", "type": "external" } ], "gene_names_uniprotkb": "pdzd2", "gene_names_refseq": "pdzd2", "protein_names_uniprotkb": "PDZ domain-containing protein 2 isoform X1", "protein_names_refseq": "PDZ domain-containing protein 2 isoform X1", "tax_id": 7955, "disease": "inflammatory bowel disease (Disease Ontology:DOID:0050589)", "pathway": " (dre:569088)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_003198698.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 5, "predicted_n_glycosites": 0, "predicted_o_glycosites": 5, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region;GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZV3-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATD7-1", "uniprot_id": [ { "id": "A0A8M3ATD7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATD7", "type": "external" } ], "mass": 96285.0, "length": 837, "protein_name": "Ecotropic viral integration site 5 protein homolog isoform X1", "gene_name": "evi5b", "organism": "Zebrafish", "refseq_name": "ecotropic viral integration site 5 protein homolog isoform X1", "refseq_ac": [ { "id": "XP_009300706", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300706", "type": "external" } ], "gene_names_uniprotkb": "evi5b", "gene_names_refseq": "evi5b", "protein_names_uniprotkb": "Ecotropic viral integration site 5 protein homolog isoform X1", "protein_names_refseq": "ecotropic viral integration site 5 protein homolog isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:553306)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300706.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0031267 small GTPase binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATD7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUK7-1", "uniprot_id": [ { "id": "A0A8M3AUK7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUK7", "type": "external" } ], "mass": 320176.0, "length": 2820, "protein_name": "Ankyrin repeat domain-containing protein 11", "gene_name": "ankrd11", "organism": "Zebrafish", "refseq_name": "ankyrin repeat domain-containing protein 11 isoform X1", "refseq_ac": [ { "id": "XP_005166634", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005166634", "type": "external" } ], "gene_names_uniprotkb": "ankrd11", "gene_names_refseq": "ankrd11", "protein_names_uniprotkb": "Ankyrin repeat domain-containing protein 11", "protein_names_refseq": "ankyrin repeat domain-containing protein 11 isoform X1", "tax_id": 7955, "disease": "KBG syndrome (Disease Ontology:DOID:14780)", "pathway": " (dre:327352)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Chromatin regulator which modulates histone acetylation and gene expression in neural precursor cells. May recruit histone deacetylases (HDACs) to the p160 coactivators/nuclear receptor complex to inhibit ligand-dependent transactivation. Has a role in proliferation and development of cortical neural precursors. May also regulate bone homeostasis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "E7F5R3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0060323 head morphogenesis;GO:0060324 face development;GO:0048705 skeletal system morphogenesis;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUK7-1", "record_type": "protein", "filter_code": "0000000.0000011.001000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B598-1", "uniprot_id": [ { "id": "A0A8M3B598_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B598", "type": "external" } ], "mass": 254945.0, "length": 2284, "protein_name": "Calcineurin-binding protein cabin-1 isoform X1", "gene_name": "cabin1", "organism": "Zebrafish", "refseq_name": "calcineurin-binding protein cabin-1 isoform X1", "refseq_ac": [ { "id": "XP_009302589", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302589", "type": "external" } ], "gene_names_uniprotkb": "cabin1", "gene_names_refseq": "cabin1", "protein_names_uniprotkb": "Calcineurin-binding protein cabin-1 isoform X1", "protein_names_refseq": "calcineurin-binding protein cabin-1 isoform X1", "tax_id": 7955, "disease": "ovarian carcinoma (Disease Ontology:DOID:4001)", "pathway": " (dre:571383)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003714 transcription corepressor activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006325 chromatin organization;GO:0000122 negative regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B598-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AW18-1", "uniprot_id": [ { "id": "A0A8M3AW18_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AW18", "type": "external" } ], "mass": 64595.0, "length": 597, "protein_name": "Disabled homolog 1 isoform X1", "gene_name": "dab1a", "organism": "Zebrafish", "refseq_name": "disabled homolog 1 isoform X1", "refseq_ac": [ { "id": "XP_009292841", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292841", "type": "external" } ], "gene_names_uniprotkb": "dab1a; dab1; si:dkey-242m13.1", "gene_names_refseq": "dab1a; dab1; si:dkey-242m13.1", "protein_names_uniprotkb": "Disabled homolog 1 isoform X1", "protein_names_refseq": "disabled homolog 1 isoform X1", "tax_id": 7955, "disease": "spinocerebellar ataxia 37 (Disease Ontology:DOID:0050984); autistic disorder (Disease Ontology:DOID:12849); status epilepticus (Disease Ontology:DOID:1824)", "pathway": " (dre:692351)", "pathway_count": 1, "publication_count": 8, "publication_id_list": "16520940;19931637;22364494;26469318;28252024;29429939;30837568;31323192", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0030154 cell differentiation;GO:0001764 neuron migration", "synthesized_glycan_count": 0, "hit_score": 0.9, "record_id": "A0A8M3AW18-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AS26-1", "uniprot_id": [ { "id": "A0A8M3AS26_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AS26", "type": "external" } ], "mass": 83409.0, "length": 755, "protein_name": "Leucine zipper putative tumor suppressor 3 isoform X1", "gene_name": "lzts3a", "organism": "Zebrafish", "refseq_name": "leucine zipper putative tumor suppressor 3 isoform X1", "refseq_ac": [ { "id": "XP_009299407", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299407", "type": "external" } ], "gene_names_uniprotkb": "lzts3a", "gene_names_refseq": "lzts3a", "protein_names_uniprotkb": "Leucine zipper putative tumor suppressor 3 isoform X1", "protein_names_refseq": "leucine zipper putative tumor suppressor 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:795227)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0043197 dendritic spine", "go_biological_process": "GO:0061001 regulation of dendritic spine morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AS26-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASZ0-1", "uniprot_id": [ { "id": "A0A8M3ASZ0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASZ0", "type": "external" } ], "mass": 85150.0, "length": 749, "protein_name": "GTPase IMAP family member 8 isoform X1", "gene_name": "si:dkey-23k10.5", "organism": "Zebrafish", "refseq_name": "GTPase IMAP family member 8 isoform X1", "refseq_ac": [ { "id": "XP_009290120", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290120", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-23k10.5", "gene_names_refseq": "si:dkey-23k10.5", "protein_names_uniprotkb": "GTPase IMAP family member 8 isoform X1", "protein_names_refseq": "GTPase IMAP family member 8 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:326062)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding;GO:0003924 GTPase activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASZ0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B082-1", "uniprot_id": [ { "id": "A0A8M3B082_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B082", "type": "external" } ], "mass": 135130.0, "length": 1198, "protein_name": "LIM and calponin homology domains-containing protein 1 isoform X1", "gene_name": "limch1b", "organism": "Zebrafish", "refseq_name": "LIM and calponin homology domains-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_009289278", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289278", "type": "external" } ], "gene_names_uniprotkb": "limch1b", "gene_names_refseq": "limch1b", "protein_names_uniprotkb": "LIM and calponin homology domains-containing protein 1 isoform X1", "protein_names_refseq": "LIM and calponin homology domains-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:557200)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009289278.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding", "go_cellular_component": "", "go_biological_process": "GO:0010604 positive regulation of macromolecule metabolic process;GO:0080090 regulation of primary metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B082-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0G2-1", "uniprot_id": [ { "id": "A0A8M3B0G2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0G2", "type": "external" } ], "mass": 98179.0, "length": 865, "protein_name": "Uncharacterized protein si:rp71-46j2.7 isoform X1", "gene_name": "si:rp71-46j2.7", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:rp71-46j2.7 isoform X1", "refseq_ac": [ { "id": "XP_009289456", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289456", "type": "external" } ], "gene_names_uniprotkb": "si:rp71-46j2.7", "gene_names_refseq": "si:rp71-46j2.7", "protein_names_uniprotkb": "Uncharacterized protein si:rp71-46j2.7 isoform X1", "protein_names_refseq": "uncharacterized protein si:rp71-46j2.7 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:368429)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035091 phosphatidylinositol binding", "go_cellular_component": "GO:0005768 endosome", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0G2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2M5-1", "uniprot_id": [ { "id": "A0A8M3B2M5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2M5", "type": "external" } ], "mass": 39777.0, "length": 351, "protein_name": "Nutritionally-regulated adipose and cardiac enriched protein homolog isoform X1", "gene_name": "si:dkey-206p8.1", "organism": "Zebrafish", "refseq_name": "si:dkey-206p8.1 isoform 1", "refseq_ac": [ { "id": "NP_001429415", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429415", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-206p8.1", "gene_names_refseq": "si:dkey-206p8.1", "protein_names_uniprotkb": "Nutritionally-regulated adipose and cardiac enriched protein homolog isoform X1", "protein_names_refseq": "si:dkey-206p8.1 isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883329)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01022021.1, SRR32588728.38648120.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505377, SAMEA3505378 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. 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This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035035 histone acetyltransferase binding", "go_cellular_component": "GO:1902562 H4 histone acetyltransferase complex;GO:0044545 NSL complex", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B3G8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B490-1", "uniprot_id": [ { "id": "A0A8M3B490_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B490", "type": "external" } ], "mass": 166307.0, "length": 1473, "protein_name": "Androglobin isoform X1", "gene_name": "adgb", "organism": "Zebrafish", "refseq_name": "androglobin isoform X1", "refseq_ac": [ { "id": "XP_009293055", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293055", "type": "external" } ], "gene_names_uniprotkb": "adgb", "gene_names_refseq": "adgb", "protein_names_uniprotkb": "Androglobin isoform X1", "protein_names_refseq": "androglobin isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:555435)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVT8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZ04-1", "uniprot_id": [ { "id": "A0A8M3AZ04_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZ04", "type": "external" } ], "mass": 111885.0, "length": 1020, "protein_name": "Disks large-associated protein 1 isoform X1", "gene_name": "dlgap1b", "organism": "Zebrafish", "refseq_name": "disks large-associated protein 1 isoform X1", "refseq_ac": [ { "id": "XP_005162638", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005162638", "type": "external" } ], "gene_names_uniprotkb": "dlgap1b", "gene_names_refseq": "dlgap1b", "protein_names_uniprotkb": "Disks large-associated protein 1 isoform X1", "protein_names_refseq": "disks large-associated protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:571372)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58ITU4;A0AC58ITU7", "ec_number_list": [], "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0099572 postsynaptic specialization", "go_biological_process": "GO:0023052 signaling;GO:0050804 modulation of chemical synaptic transmission", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZ04-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZR4-1", "uniprot_id": [ { "id": "A0A8M3AZR4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZR4", "type": "external" } ], "mass": 49660.0, "length": 435, "protein_name": "Ras association domain-containing protein 7 isoform X1", "gene_name": "rassf7a", "organism": "Zebrafish", "refseq_name": "ras association domain-containing protein 7 isoform X1", "refseq_ac": [ { "id": "XP_009296338", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296338", "type": "external" } ], "gene_names_uniprotkb": "rassf7a", "gene_names_refseq": "rassf7a", "protein_names_uniprotkb": "Ras association domain-containing protein 7 isoform X1", "protein_names_refseq": "ras association domain-containing protein 7 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:564485)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "X1WD23", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response;GO:0042981 regulation of apoptotic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXT0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATB3-1", "uniprot_id": [ { "id": "A0A8M3ATB3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATB3", "type": "external" } ], "mass": 49423.0, "length": 454, "protein_name": "Uncharacterized protein fam131bb isoform X1", "gene_name": "fam131bb", "organism": "Zebrafish", "refseq_name": "uncharacterized protein fam131bb isoform X1", "refseq_ac": [ { "id": "XP_009290483", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290483", "type": "external" } ], "gene_names_uniprotkb": "fam131bb", "gene_names_refseq": "fam131bb", "protein_names_uniprotkb": "Uncharacterized protein fam131bb isoform X1", "protein_names_refseq": "uncharacterized protein fam131bb isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556725)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATB3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUU5-1", "uniprot_id": [ { "id": "A0A8M3AUU5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUU5", "type": "external" } ], "mass": 113658.0, "length": 996, "protein_name": "EVI5-like protein isoform X1", "gene_name": "evi5l", "organism": "Zebrafish", "refseq_name": "EVI5-like protein isoform X1", "refseq_ac": [ { "id": "XP_009291813", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291813", "type": "external" } ], "gene_names_uniprotkb": "evi5l", "gene_names_refseq": "evi5l", "protein_names_uniprotkb": "EVI5-like protein isoform X1", "protein_names_refseq": "EVI5-like protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:566318)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009291813.3. 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This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0031410 cytoplasmic vesicle", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2D5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AS69-1", "uniprot_id": [ { "id": "A0A8M3AS69_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AS69", "type": "external" } ], "mass": 32651.0, "length": 298, "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC101886205", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009299663", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299663", "type": "external" } ], "gene_names_uniprotkb": "LOC101886205", "gene_names_refseq": "LOC101886205", "protein_names_uniprotkb": "Ig-like domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101886205)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005739 mitochondrion;GO:1904115 axon cytoplasm", "go_biological_process": "GO:0008089 anterograde axonal transport", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M3AS86-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASA8-1", "uniprot_id": [ { "id": "A0A8M3ASA8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASA8", "type": "external" } ], "mass": 61642.0, "length": 535, "protein_name": "E3 ubiquitin-protein ligase TRIM39-like", "gene_name": "btr23", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase TRIM39-like", "refseq_ac": [ { "id": "XP_009292260", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292260", "type": "external" } ], "gene_names_uniprotkb": "btr23", "gene_names_refseq": "btr23", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase TRIM39-like", "protein_names_refseq": "E3 ubiquitin-protein ligase TRIM39-like", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HZV2;A0AC58HZV3", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASA8-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASS7-1", "uniprot_id": [ { "id": "A0A8M3ASS7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASS7", "type": "external" } ], "mass": 39366.0, "length": 341, "protein_name": "Protein FAM81B isoform X1", "gene_name": "fam81b", "organism": "Zebrafish", "refseq_name": "protein FAM81B isoform X1", "refseq_ac": [ { "id": "XP_009300072", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300072", "type": "external" } ], "gene_names_uniprotkb": "fam81b", "gene_names_refseq": "fam81b", "protein_names_uniprotkb": "Protein FAM81B isoform X1", "protein_names_refseq": "protein FAM81B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886959)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_009300072.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASS7-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASV8-1", "uniprot_id": [ { "id": "A0A8M3ASV8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASV8", "type": "external" } ], "mass": 74130.0, "length": 665, "protein_name": "Kelch-like protein 31", "gene_name": "klhl43", "organism": "Zebrafish", "refseq_name": "kelch-like protein 31", "refseq_ac": [ { "id": "XP_009292716", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292716", "type": "external" } ], "gene_names_uniprotkb": "klhl43", "gene_names_refseq": "klhl43", "protein_names_uniprotkb": "Kelch-like protein 31", "protein_names_refseq": "kelch-like protein 31", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58I1C1;A0AC58I1D4;E7F5R6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:0046329 negative regulation of JNK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASV8-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B017-1", "uniprot_id": [ { "id": "A0A8M3B017_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B017", "type": "external" } ], "mass": 253243.0, "length": 2241, "protein_name": "Kinetochore-associated protein 1 isoform X1", "gene_name": "kntc1", "organism": "Zebrafish", "refseq_name": "kinetochore-associated protein 1 isoform X1", "refseq_ac": [ { "id": "XP_009300257", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300257", "type": "external" } ], "gene_names_uniprotkb": "kntc1", "gene_names_refseq": "kntc1", "protein_names_uniprotkb": "Kinetochore-associated protein 1 isoform X1", "protein_names_refseq": "kinetochore-associated protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:497376)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009300257.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0031267 small GTPase binding", "go_cellular_component": "GO:0005828 kinetochore microtubule;GO:1990423 RZZ complex;GO:0005737 cytoplasm", "go_biological_process": "GO:1903394 protein localization to kinetochore involved in kinetochore assembly;GO:0007094 mitotic spindle assembly checkpoint signaling;GO:0000070 mitotic sister chromatid segregation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B017-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AT34-1", "uniprot_id": [ { "id": "A0A8M3AT34_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AT34", "type": "external" } ], "mass": 146588.0, "length": 1351, "protein_name": "Centrosomal protein of 170 kDa isoform X1; Centrosomal protein of 170 kDa isoform X2", "gene_name": "cep170ab", "organism": "Zebrafish", "refseq_name": "centrosomal protein of 170 kDa isoform X2", "refseq_ac": [ { "id": "XP_068074381", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068074381", "type": "external" } ], "gene_names_uniprotkb": "cep170ab", "gene_names_refseq": "cep170ab", "protein_names_uniprotkb": "Centrosomal protein of 170 kDa isoform X1; Centrosomal protein of 170 kDa isoform X2", "protein_names_refseq": "centrosomal protein of 170 kDa isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:566358)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JT82", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005814 centriole", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AT34-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AT55-1", "uniprot_id": [ { "id": "A0A8M3AT55_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AT55", "type": "external" } ], "mass": 97119.0, "length": 886, "protein_name": "Coiled-coil domain-containing protein 14 isoform X1", "gene_name": "ccdc14", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 14 isoform X1", "refseq_ac": [ { "id": "XP_009300448", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300448", "type": "external" } ], "gene_names_uniprotkb": "ccdc14", "gene_names_refseq": "ccdc14", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 14 isoform X1", "protein_names_refseq": "coiled-coil domain-containing protein 14 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:562752)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300448.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4I9X3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0034451 centriolar satellite", "go_biological_process": "GO:0071539 protein localization to centrosome", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AT55-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATA6-1", "uniprot_id": [ { "id": "A0A8M3ATA6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATA6", "type": "external" } ], "mass": 72687.0, "length": 645, "protein_name": "Uncharacterized protein", "gene_name": "LOC101882356", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009300577", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300577", "type": "external" } ], "gene_names_uniprotkb": "LOC101882356", "gene_names_refseq": "LOC101882356", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101882356)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300577.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATA6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATD1-1", "uniprot_id": [ { "id": "A0A8M3ATD1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATD1", "type": "external" } ], "mass": 120874.0, "length": 1051, "protein_name": "FERM, ARHGEF and pleckstrin domain-containing protein 2", "gene_name": "farp2", "organism": "Zebrafish", "refseq_name": "FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1", "refseq_ac": [ { "id": "XP_009300696", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300696", "type": "external" } ], "gene_names_uniprotkb": "farp2", "gene_names_refseq": "farp2", "protein_names_uniprotkb": "FERM, ARHGEF and pleckstrin domain-containing protein 2; FERM, RhoGEF and pleckstrin domain-containing protein 2", "protein_names_refseq": "FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:567490)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Functions as a guanine nucleotide exchange factor that activates RAC1. May have relatively low activity. Plays a role in the response to class 3 semaphorins and remodeling of the actin cytoskeleton. Plays a role in TNFSF11-mediated osteoclast differentiation, especially in podosome rearrangement and reorganization of the actin cytoskeleton. Regulates the activation of ITGB3, integrin signaling and cell adhesion., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity;GO:0008092 cytoskeletal protein binding", "go_cellular_component": "GO:0005829 cytosol", "go_biological_process": "GO:0007165 signal transduction;GO:0048468 cell development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATD1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATD4-1", "uniprot_id": [ { "id": "A0A8M3ATD4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATD4", "type": "external" } ], "mass": 85909.0, "length": 754, "protein_name": "Phosphoinositide 3-kinase regulatory subunit 6 isoform X2", "gene_name": "pik3r6", "organism": "Zebrafish", "refseq_name": "phosphoinositide 3-kinase regulatory subunit 6 isoform X2", "refseq_ac": [ { "id": "XP_009300649", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300649", "type": "external" } ], "gene_names_uniprotkb": "pik3r6", "gene_names_refseq": "pik3r6", "protein_names_uniprotkb": "Phosphoinositide 3-kinase regulatory subunit 6 isoform X2", "protein_names_refseq": "phosphoinositide 3-kinase regulatory subunit 6 isoform X2", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JUK6", "ec_number_list": [], "go_molecular_function": "GO:0046935 1-phosphatidylinositol-3-kinase regulator activity", "go_cellular_component": "GO:0005944 phosphatidylinositol 3-kinase complex, class IB", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATD4-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATN1-1", "uniprot_id": [ { "id": "A0A8M3ATN1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATN1", "type": "external" } ], "mass": 80526.0, "length": 719, "protein_name": "Rap1 GTPase-activating protein 1 isoform X2", "gene_name": "rap1gapb", "organism": "Zebrafish", "refseq_name": "rap1 GTPase-activating protein 1 isoform X2", "refseq_ac": [ { "id": "XP_009300956", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300956", "type": "external" } ], "gene_names_uniprotkb": "rap1gapb", "gene_names_refseq": "rap1gapb", "protein_names_uniprotkb": "Rap1 GTPase-activating protein 1 isoform X2", "protein_names_refseq": "rap1 GTPase-activating protein 1 isoform X2", "tax_id": 7955, "disease": "myelodysplastic syndrome (Disease Ontology:DOID:0050908); focal segmental glomerulosclerosis (Disease Ontology:DOID:1312); pancreatic cancer (Disease Ontology:DOID:1793); melanoma (Disease Ontology:DOID:1909); bipolar disorder (Disease Ontology:DOID:3312); papillary thyroid carcinoma (Disease Ontology:DOID:3969)", "pathway": " (dre:100538309)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300956.1. COMPLETENESS: full length., [RefSeq]; GTPase activator for the nuclear Ras-related regulatory protein RAP-1A (KREV-1), converting it to the putatively inactive GDP-bound state., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030424 axon", "go_biological_process": "GO:0051056 regulation of small GTPase mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATN1-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATP6-1", "uniprot_id": [ { "id": "A0A8M3ATP6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATP6", "type": "external" } ], "mass": 28776.0, "length": 249, "protein_name": "GTPase IMAP family member 4-like", "gene_name": "si:dkey-30g5.1", "organism": "Zebrafish", "refseq_name": "GTPase IMAP family member 4-like", "refseq_ac": [ { "id": "XP_009290812", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290812", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-30g5.1", "gene_names_refseq": "si:dkey-30g5.1", "protein_names_uniprotkb": "GTPase IMAP family member 4-like", "protein_names_refseq": "GTPase IMAP family member 4-like", "tax_id": 7955, "disease": "", "pathway": " (dre:791501)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 6% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009290812.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003924 GTPase activity;GO:0005525 GTP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATP6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATR5-1", "uniprot_id": [ { "id": "A0A8M3ATR5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATR5", "type": "external" } ], "mass": 164884.0, "length": 1486, "protein_name": "Ral GTPase-activating protein subunit beta", "gene_name": "ralgapb", "organism": "Zebrafish", "refseq_name": "ral GTPase-activating protein subunit beta isoform X9", "refseq_ac": [ { "id": "XP_009301041", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301041", "type": "external" } ], "gene_names_uniprotkb": "ralgapb", "gene_names_refseq": "ralgapb", "protein_names_uniprotkb": "Ral GTPase-activating protein subunit beta; p170", "protein_names_refseq": "ral GTPase-activating protein subunit beta isoform X9", "tax_id": 7955, "disease": "", "pathway": " (dre:559303)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Non-catalytic subunit of the heterodimeric RalGAP1 and RalGAP2 complexes which act as GTPase activators for the Ras-like small GTPases RALA and RALB., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "", "go_biological_process": "GO:0051056 regulation of small GTPase mediated signal transduction;GO:0032484 Ral protein signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATR5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATR6-1", "uniprot_id": [ { "id": "A0A8M3ATR6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATR6", "type": "external" } ], "mass": 35660.0, "length": 323, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "sc:d156", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009290852", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290852", "type": "external" } ], "gene_names_uniprotkb": "sc:d156; si:ch211-53m15.1", "gene_names_refseq": "sc:d156; si:ch211-53m15.1", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100142634)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATR6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATS1-1", "uniprot_id": [ { "id": "A0A8M3ATS1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATS1", "type": "external" } ], "mass": 31755.0, "length": 275, "protein_name": "Neurexophilin", "gene_name": "nxph4", "organism": "Zebrafish", "refseq_name": "neurexophilin-4", "refseq_ac": [ { "id": "XP_009301047", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301047", "type": "external" } ], "gene_names_uniprotkb": "nxph4", "gene_names_refseq": "nxph4", "protein_names_uniprotkb": "Neurexophilin", "protein_names_refseq": "neurexophilin-4", "tax_id": 7955, "disease": "", "pathway": " (dre:100329563)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009301047.2. COMPLETENESS: full length., [RefSeq]; May be signaling molecules that resemble neuropeptides., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATS1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATT1-1", "uniprot_id": [ { "id": "A0A8M3ATT1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATT1", "type": "external" } ], "mass": 99036.0, "length": 951, "protein_name": "Uncharacterized protein si:cabz01007794.1 isoform X1", "gene_name": "si:cabz01007794.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:cabz01007794.1 isoform X1", "refseq_ac": [ { "id": "XP_009301086", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301086", "type": "external" } ], "gene_names_uniprotkb": "si:cabz01007794.1", "gene_names_refseq": "si:cabz01007794.1", "protein_names_uniprotkb": "Uncharacterized protein si:cabz01007794.1 isoform X1", "protein_names_refseq": "uncharacterized protein si:cabz01007794.1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100537515)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009301086.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:1900449 regulation of glutamate receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATT1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATU0-1", "uniprot_id": [ { "id": "A0A8M3ATU0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATU0", "type": "external" } ], "mass": 26991.0, "length": 280, "protein_name": "Uncharacterized protein", "gene_name": "LOC553259", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009301130", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301130", "type": "external" } ], "gene_names_uniprotkb": "LOC553259", "gene_names_refseq": "LOC553259", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:553259)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 5% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATU0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATU5-1", "uniprot_id": [ { "id": "A0A8M3ATU5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATU5", "type": "external" } ], "mass": 36958.0, "length": 329, "protein_name": "G-protein coupled bile acid receptor 1", "gene_name": "LOC100000545", "organism": "Zebrafish", "refseq_name": "G-protein coupled bile acid receptor 1", "refseq_ac": [ { "id": "XP_009301052", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301052", "type": "external" } ], "gene_names_uniprotkb": "LOC100000545", "gene_names_refseq": "LOC100000545", "protein_names_uniprotkb": "G-protein coupled bile acid receptor 1", "protein_names_refseq": "G-protein coupled bile acid receptor 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100000545)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009301052.1. COMPLETENESS: full length., [RefSeq]; G protein-coupled receptor for bile acid. Bile acid-binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of downstream effectors, such as adenylate cyclase. GPBAR1 is coupled to G(s) G proteins and mediates activation of adenylate cyclase activity. Activated by bile acids, such as lithocholate, deoxycholate, chenodeoxycholate and cholate, in descending order. Apart from their role in lipid dietary absorption and cholesterol catabolism, bile acids act as an important signaling molecule, involved in processes, such as energy expenditure or tissue inflammation. GPBAR1-mediated signaling promotes energy expenditure and adiposity reduction in brown adipose tissue by activating adenylate cyclase, leading to DIO2 activation. Involved in bile acid promoted GLP-1 secretion., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0038182 G protein-coupled bile acid receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0038184 adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATU5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATU9-1", "uniprot_id": [ { "id": "A0A8M3ATU9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATU9", "type": "external" } ], "mass": 78010.0, "length": 701, "protein_name": "B-cell receptor CD22-like isoform X1", "gene_name": "LOC103909439", "organism": "Zebrafish", "refseq_name": "B-cell receptor CD22-like precursor", "refseq_ac": [ { "id": "NP_001430424", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001430424", "type": "external" } ], "gene_names_uniprotkb": "LOC103909439", "gene_names_refseq": "LOC103909439", "protein_names_uniprotkb": "B-cell receptor CD22-like isoform X1", "protein_names_refseq": "B-cell receptor CD22-like precursor", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.24680550.1, SRR32588730.7786462.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505374 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Sep 18, 2025 this sequence version replaced XP_073762907.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58FZT8;A0AC58FZU4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATU9-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATX3-1", "uniprot_id": [ { "id": "A0A8M3ATX3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATX3", "type": "external" } ], "mass": 75751.0, "length": 659, "protein_name": "Calpain-5 isoform X1", "gene_name": "capn5b", "organism": "Zebrafish", "refseq_name": "calpain-5 isoform X1", "refseq_ac": [ { "id": "XP_009293672", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293672", "type": "external" } ], "gene_names_uniprotkb": "capn5b", "gene_names_refseq": "capn5b", "protein_names_uniprotkb": "Calpain-5 isoform X1", "protein_names_refseq": "calpain-5 isoform X1", "tax_id": 7955, "disease": "neovascular inflammatory vitreoretinopathy (Disease Ontology:DOID:9719)", "pathway": " (dre:100006332)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004198 calcium-dependent cysteine-type endopeptidase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATX3-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ATZ2-1", "uniprot_id": [ { "id": "A0A8M3ATZ2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ATZ2", "type": "external" } ], "mass": 36898.0, "length": 313, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC553509", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_003201690", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_003201690", "type": "external" } ], "gene_names_uniprotkb": "LOC553509", "gene_names_refseq": "LOC553509", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_003201690.1. COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58J147", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0010468 regulation of gene expression", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ATZ2-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AU01-1", "uniprot_id": [ { "id": "A0A8M3AU01_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AU01", "type": "external" } ], "mass": 120907.0, "length": 1072, "protein_name": "Uncharacterized protein si:dkey-28a3.2 isoform X1", "gene_name": "si:dkey-28a3.2", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-28a3.2 isoform X1", "refseq_ac": [ { "id": "XP_009301277", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301277", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-28a3.2", "gene_names_refseq": "si:dkey-28a3.2", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-28a3.2 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-28a3.2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884625)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009301277.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IFW6;A0AC58G3H6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0045892 negative regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AU01-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AU20-1", "uniprot_id": [ { "id": "A0A8M3AU20_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AU20", "type": "external" } ], "mass": 198189.0, "length": 1760, "protein_name": "Tetratricopeptide repeat protein 6 isoform X1", "gene_name": "ttc6", "organism": "Zebrafish", "refseq_name": "tetratricopeptide repeat protein 6 isoform X1", "refseq_ac": [ { "id": "XP_009291126", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291126", "type": "external" } ], "gene_names_uniprotkb": "ttc6", "gene_names_refseq": "ttc6", "protein_names_uniprotkb": "Tetratricopeptide repeat protein 6 isoform X1", "protein_names_refseq": "tetratricopeptide repeat protein 6 isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HQK4;A0AC58HQL1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AU20-1", "record_type": "protein", "filter_code": "0000000.0000000.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AU80-1", "uniprot_id": [ { "id": "A0A8M3AU80_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AU80", "type": "external" } ], "mass": 112994.0, "length": 990, "protein_name": "Transcription elongation regulator 1", "gene_name": "tcerg1b", "organism": "Zebrafish", "refseq_name": "transcription elongation regulator 1", "refseq_ac": [ { "id": "XP_009293957", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293957", "type": "external" } ], "gene_names_uniprotkb": "tcerg1b", "gene_names_refseq": "tcerg1b", "protein_names_uniprotkb": "Transcription elongation regulator 1; TATA box-binding protein-associated factor 2S; Transcription factor CA150", "protein_names_refseq": "transcription elongation regulator 1", "tax_id": 7955, "disease": "", "pathway": " (dre:797473)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0070063 RNA polymerase binding;GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AU80-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUA8-1", "uniprot_id": [ { "id": "A0A8M3AUA8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUA8", "type": "external" } ], "mass": 54028.0, "length": 484, "protein_name": "Cytospin-A", "gene_name": "si:ch211-195o20.7", "organism": "Zebrafish", "refseq_name": "cytospin-A isoform X1", "refseq_ac": [ { "id": "XP_009291345", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291345", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-195o20.7", "gene_names_refseq": "si:ch211-195o20.7", "protein_names_uniprotkb": "Cytospin-A", "protein_names_refseq": "cytospin-A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:564006)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Involved in cytokinesis and spindle organization. May play a role in actin cytoskeleton organization and microtubule stabilization and hence required for proper cell adhesion and migration., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005819 spindle;GO:0005815 microtubule organizing center;GO:0031941 filamentous actin;GO:0005921 gap junction", "go_biological_process": "GO:0051301 cell division;GO:0030036 actin cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUA8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUC1-1", "uniprot_id": [ { "id": "A0A8M3AUC1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUC1", "type": "external" } ], "mass": 39919.0, "length": 361, "protein_name": "Olfactory receptor class A-like protein 4 isoform X1", "gene_name": "ora3.1", "organism": "Zebrafish", "refseq_name": "olfactory receptor class A-like protein 4 isoform X1", "refseq_ac": [ { "id": "XP_009294044", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294044", "type": "external" } ], "gene_names_uniprotkb": "ora3.1", "gene_names_refseq": "ora3.1", "protein_names_uniprotkb": "Olfactory receptor class A-like protein 4 isoform X1", "protein_names_refseq": "olfactory receptor class A-like protein 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100004895)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0033038 bitter taste receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUC1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUG8-1", "uniprot_id": [ { "id": "A0A8M3AUG8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUG8", "type": "external" } ], "mass": 101257.0, "length": 885, "protein_name": "Protein NLRC3-like", "gene_name": "si:dkey-222h21.11", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "si:dkey-222h21.11", "gene_names_refseq": "", "protein_names_uniprotkb": "Protein NLRC3-like", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:103909520)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUG8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUJ8-1", "uniprot_id": [ { "id": "A0A8M3AUJ8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUJ8", "type": "external" } ], "mass": 139804.0, "length": 1282, "protein_name": "NHS-like protein 2 isoform X1", "gene_name": "nhsl2", "organism": "Zebrafish", "refseq_name": "NHS-like protein 2 isoform X1", "refseq_ac": [ { "id": "XP_009301724", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301724", "type": "external" } ], "gene_names_uniprotkb": "nhsl2", "gene_names_refseq": "nhsl2", "protein_names_uniprotkb": "NHS-like protein 2 isoform X1", "protein_names_refseq": "NHS-like protein 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:794153)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0030154 cell differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUJ8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUK5-1", "uniprot_id": [ { "id": "A0A8M3AUK5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUK5", "type": "external" } ], "mass": 24374.0, "length": 207, "protein_name": "Uncharacterized protein LOC569258; Uncharacterized protein isoform X1", "gene_name": "zgc:113372", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC569258", "refseq_ac": [ { "id": "NP_001025405", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001025405", "type": "external" } ], "gene_names_uniprotkb": "zgc:113372", "gene_names_refseq": "zgc:113372", "protein_names_uniprotkb": "Uncharacterized protein LOC569258; Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC569258", "tax_id": 7955, "disease": "", "pathway": " (dre:569258)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "26469318", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC096910.1, SRR32588724.1363077.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708828, SAMEA898399 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000017.1. On Jun 26, 2024 this sequence version replaced NP_001025405.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HNF5;F1QRU4", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.2, "record_id": "A0A8M3AUK5-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUK6-1", "uniprot_id": [ { "id": "A0A8M3AUK6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUK6", "type": "external" } ], "mass": 49188.0, "length": 422, "protein_name": "Uncharacterized protein si:dkey-253d23.11", "gene_name": "si:dkey-253d23.11", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-253d23.11", "refseq_ac": [ { "id": "XP_009294395", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294395", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-253d23.11", "gene_names_refseq": "si:dkey-253d23.11", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-253d23.11", "protein_names_refseq": "uncharacterized protein si:dkey-253d23.11", "tax_id": 7955, "disease": "", "pathway": " (dre:100034619)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUK6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUP9-1", "uniprot_id": [ { "id": "A0A8M3AUP9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUP9", "type": "external" } ], "mass": 59085.0, "length": 517, "protein_name": "Uncharacterized protein si:ch211-208g1.1", "gene_name": "si:ch211-208g1.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-208g1.1", "refseq_ac": [ { "id": "XP_009301836", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301836", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-208g1.1", "gene_names_refseq": "si:ch211-208g1.1", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-208g1.1", "protein_names_refseq": "uncharacterized protein si:ch211-208g1.1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886861)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009301836.3. 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This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004875 complement receptor activity;GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0002430 complement receptor mediated signaling pathway;GO:0006954 inflammatory response;GO:0007204 positive regulation of cytosolic calcium ion concentration;GO:0007200 phospholipase C-activating G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUQ4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUR2-1", "uniprot_id": [ { "id": "A0A8M3AUR2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUR2", "type": "external" } ], "mass": 76263.0, "length": 670, "protein_name": "C-Jun-amino-terminal kinase-interacting protein 1", "gene_name": "mapk8ip1b", "organism": "Zebrafish", "refseq_name": "C-Jun-amino-terminal kinase-interacting protein 1", "refseq_ac": [ { "id": "XP_009301942", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301942", "type": "external" } ], "gene_names_uniprotkb": "mapk8ip1b", "gene_names_refseq": "mapk8ip1b", "protein_names_uniprotkb": "C-Jun-amino-terminal kinase-interacting protein 1", "protein_names_refseq": "C-Jun-amino-terminal kinase-interacting protein 1", "tax_id": 7955, "disease": "type 2 diabetes mellitus (Disease Ontology:DOID:9352)", "pathway": " (dre:100333948)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005078 MAP-kinase scaffold activity;GO:0016301 kinase activity;GO:0008432 JUN kinase binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007254 JNK cascade;GO:0046328 regulation of JNK cascade", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUR2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUW1-1", "uniprot_id": [ { "id": "A0A8M3AUW1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUW1", "type": "external" } ], "mass": 25168.0, "length": 223, "protein_name": "Peroxiredoxin-like 2C isoform X1", "gene_name": "prxl2c", "organism": "Zebrafish", "refseq_name": "peroxiredoxin-like 2C isoform X1", "refseq_ac": [ { "id": "XP_009301975", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301975", "type": "external" } ], "gene_names_uniprotkb": "prxl2c", "gene_names_refseq": "prxl2c", "protein_names_uniprotkb": "Peroxiredoxin-like 2C isoform X1", "protein_names_refseq": "peroxiredoxin-like 2C isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100332791)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUW1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUX5-1", "uniprot_id": [ { "id": "A0A8M3AUX5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUX5", "type": "external" } ], "mass": 33390.0, "length": 297, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101886239", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009302010", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302010", "type": "external" } ], "gene_names_uniprotkb": "LOC101886239", "gene_names_refseq": "LOC101886239", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886239)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUX5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUX7-1", "uniprot_id": [ { "id": "A0A8M3AUX7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUX7", "type": "external" } ], "mass": 24273.0, "length": 225, "protein_name": "LHFPL tetraspan subfamily member 3 protein", "gene_name": "lhfpl4b", "organism": "Zebrafish", "refseq_name": "LHFPL tetraspan subfamily member 3 protein", "refseq_ac": [ { "id": "XP_009302025", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302025", "type": "external" } ], "gene_names_uniprotkb": "lhfpl4b", "gene_names_refseq": "lhfpl4b", "protein_names_uniprotkb": "LHFPL tetraspan subfamily member 3 protein", "protein_names_refseq": "LHFPL tetraspan subfamily member 3 protein", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 67 (Disease Ontology:DOID:0110518)", "pathway": " (dre:565558)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F8W4K4", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007605 sensory perception of sound", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUX7-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXY4-1", "uniprot_id": [ { "id": "A0A8M3AXY4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXY4", "type": "external" } ], "mass": 147724.0, "length": 1308, "protein_name": "E3 ubiquitin-protein ligase RNF123", "gene_name": "rnf123", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase RNF123 isoform X1", "refseq_ac": [ { "id": "XP_009294771", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294771", "type": "external" } ], "gene_names_uniprotkb": "rnf123", "gene_names_refseq": "rnf123", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RNF123; 2.3.2.27; Kip1 ubiquitination-promoting complex protein 1; RING finger protein 123", "protein_names_refseq": "E3 ubiquitin-protein ligase RNF123 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884269)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity;GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0016567 protein ubiquitination;GO:0030163 protein catabolic process;GO:0051603 proteolysis involved in protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXY4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AUZ8-1", "uniprot_id": [ { "id": "A0A8M3AUZ8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AUZ8", "type": "external" } ], "mass": 95440.0, "length": 859, "protein_name": "Extracellular calcium-sensing receptor isoform X1", "gene_name": "olfcv3", "organism": "Zebrafish", "refseq_name": "extracellular calcium-sensing receptor isoform X1", "refseq_ac": [ { "id": "XP_009291997", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291997", "type": "external" } ], "gene_names_uniprotkb": "olfcv3", "gene_names_refseq": "olfcv3", "protein_names_uniprotkb": "Extracellular calcium-sensing receptor isoform X1", "protein_names_refseq": "extracellular calcium-sensing receptor isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882886)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009291997.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AUZ8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AV03-1", "uniprot_id": [ { "id": "A0A8M3AV03_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AV03", "type": "external" } ], "mass": 95559.0, "length": 856, "protein_name": "Extracellular calcium-sensing receptor-like", "gene_name": "olfck3", "organism": "Zebrafish", "refseq_name": "extracellular calcium-sensing receptor-like", "refseq_ac": [ { "id": "XP_009292006", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292006", "type": "external" } ], "gene_names_uniprotkb": "olfck3", "gene_names_refseq": "olfck3", "protein_names_uniprotkb": "Extracellular calcium-sensing receptor-like", "protein_names_refseq": "extracellular calcium-sensing receptor-like", "tax_id": 7955, "disease": "", "pathway": " (dre:569011)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009292006.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AV03-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B4S6-1", "uniprot_id": [ { "id": "A0A8M3B4S6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B4S6", "type": "external" } ], "mass": 215727.0, "length": 1939, "protein_name": "Glutamate-rich protein 3 isoform X1", "gene_name": "erich3", "organism": "Zebrafish", "refseq_name": "glutamate-rich protein 3 isoform X1", "refseq_ac": [ { "id": "XP_009302134", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302134", "type": "external" } ], "gene_names_uniprotkb": "erich3; zgc:158613", "gene_names_refseq": "erich3; zgc:158613", "protein_names_uniprotkb": "Glutamate-rich protein 3 isoform X1", "protein_names_refseq": "glutamate-rich protein 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:797289)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M3B4S6-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AV27-1", "uniprot_id": [ { "id": "A0A8M3AV27_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AV27", "type": "external" } ], "mass": 40328.0, "length": 356, "protein_name": "LIM/homeobox protein Lhx8", "gene_name": "lhx8b", "organism": "Zebrafish", "refseq_name": "LIM/homeobox protein Lhx8", "refseq_ac": [ { "id": "XP_009302150", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302150", "type": "external" } ], "gene_names_uniprotkb": "lhx8b; LOC799481", "gene_names_refseq": "LOC799481", "protein_names_uniprotkb": "LIM/homeobox protein Lhx8", "protein_names_refseq": "LIM/homeobox protein Lhx8", "tax_id": 7955, "disease": "", "pathway": " (dre:799481)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009302150.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0046872 metal ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II;GO:0030182 neuron differentiation;GO:0021884 forebrain neuron development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AV27-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AV83-1", "uniprot_id": [ { "id": "A0A8M3AV83_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AV83", "type": "external" } ], "mass": 39650.0, "length": 357, "protein_name": "G-protein coupled receptor 20", "gene_name": "LOC100329768", "organism": "Zebrafish", "refseq_name": "G-protein coupled receptor 20", "refseq_ac": [ { "id": "XP_009292205", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292205", "type": "external" } ], "gene_names_uniprotkb": "LOC100329768", "gene_names_refseq": "LOC100329768", "protein_names_uniprotkb": "G-protein coupled receptor 20", "protein_names_refseq": "G-protein coupled receptor 20", "tax_id": 7955, "disease": "", "pathway": " (dre:100329768)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_009292205.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AV83-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVE8-1", "uniprot_id": [ { "id": "A0A8M3AVE8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVE8", "type": "external" } ], "mass": 21900.0, "length": 191, "protein_name": "Actin-associated protein FAM107A isoform X1", "gene_name": "si:ch211-218o21.4", "organism": "Zebrafish", "refseq_name": "actin-associated protein FAM107A isoform X1", "refseq_ac": [ { "id": "XP_009302419", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302419", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-218o21.4", "gene_names_refseq": "si:ch211-218o21.4", "protein_names_uniprotkb": "Actin-associated protein FAM107A isoform X1", "protein_names_refseq": "actin-associated protein FAM107A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100320132)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0045202 synapse;GO:0001725 stress fiber;GO:0043005 neuron projection", "go_biological_process": "GO:0032956 regulation of actin cytoskeleton organization;GO:0051017 actin filament bundle assembly;GO:0030041 actin filament polymerization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVE8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVG2-1", "uniprot_id": [ { "id": "A0A8M3AVG2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVG2", "type": "external" } ], "mass": 41304.0, "length": 355, "protein_name": "Class I histocompatibility antigen, Gogo-C*0202 alpha chain-like", "gene_name": "mhc1lba", "organism": "Zebrafish", "refseq_name": "class I histocompatibility antigen, Gogo-C*0202 alpha chain-like", "refseq_ac": [ { "id": "XP_009302506", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302506", "type": "external" } ], "gene_names_uniprotkb": "mhc1lba", "gene_names_refseq": "mhc1lba", "protein_names_uniprotkb": "Class I histocompatibility antigen, Gogo-C*0202 alpha chain-like", "protein_names_refseq": "class I histocompatibility antigen, Gogo-C*0202 alpha chain-like", "tax_id": 7955, "disease": "stomach cancer (Disease Ontology:DOID:10534); dengue hemorrhagic fever (Disease Ontology:DOID:12206); urinary schistosomiasis (Disease Ontology:DOID:1394); pulmonary tuberculosis (Disease Ontology:DOID:2957)", "pathway": " (dre:100150607)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009302506.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 4, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVG2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVH5-1", "uniprot_id": [ { "id": "A0A8M3AVH5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVH5", "type": "external" } ], "mass": 195191.0, "length": 1723, "protein_name": "RIMS-binding protein 2", "gene_name": "rimbp2b", "organism": "Zebrafish", "refseq_name": "RIMS-binding protein 2 isoform X1", "refseq_ac": [ { "id": "XP_009302494", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302494", "type": "external" } ], "gene_names_uniprotkb": "rimbp2b", "gene_names_refseq": "rimbp2b", "protein_names_uniprotkb": "RIMS-binding protein 2", "protein_names_refseq": "RIMS-binding protein 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:563166)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Plays a role in the synaptic transmission as bifunctional linker that interacts simultaneously with RIMS1, RIMS2, CACNA1D and CACNA1B., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GBQ1", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "GO:0007274 neuromuscular synaptic transmission", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVH5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVH6-1", "uniprot_id": [ { "id": "A0A8M3AVH6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVH6", "type": "external" } ], "mass": 72762.0, "length": 641, "protein_name": "Probable G-protein coupled receptor 153 isoform X1", "gene_name": "gpr153", "organism": "Zebrafish", "refseq_name": "probable G-protein coupled receptor 153 isoform X1", "refseq_ac": [ { "id": "XP_009302535", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302535", "type": "external" } ], "gene_names_uniprotkb": "gpr153", "gene_names_refseq": "gpr153", "protein_names_uniprotkb": "Probable G-protein coupled receptor 153 isoform X1", "protein_names_refseq": "probable G-protein coupled receptor 153 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883998)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVH6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AYL2-1", "uniprot_id": [ { "id": "A0A8M3AYL2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AYL2", "type": "external" } ], "mass": 81538.0, "length": 732, "protein_name": "Rho guanine nucleotide exchange factor 25", "gene_name": "arhgef25a", "organism": "Zebrafish", "refseq_name": "rho guanine nucleotide exchange factor 25 isoform X1", "refseq_ac": [ { "id": "XP_009295232", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295232", "type": "external" } ], "gene_names_uniprotkb": "arhgef25a", "gene_names_refseq": "arhgef25a", "protein_names_uniprotkb": "Rho guanine nucleotide exchange factor 25; Guanine nucleotide exchange factor GEFT; Rac/Cdc42/Rho exchange factor GEFT; RhoA/Rac/Cdc42 guanine nucleotide exchange factor GEFT; p63RhoGEF", "protein_names_refseq": "rho guanine nucleotide exchange factor 25 isoform X1", "tax_id": 7955, "disease": "epilepsy (Disease Ontology:DOID:1826)", "pathway": " (dre:100331456)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295232.1. COMPLETENESS: full length., [RefSeq]; May play a role in actin cytoskeleton reorganization in different tissues since its activation induces formation of actin stress fibers. It works as a guanine nucleotide exchange factor for Rho family of small GTPases. Links specifically G alpha q/11-coupled receptors to RHOA activation. May be an important regulator of processes involved in axon and dendrite formation. In neurons seems to be an exchange factor primarily for RAC1. Involved in skeletal myogenesis., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0030017 sarcomere;GO:0005737 cytoplasm;GO:0019898 extrinsic component of membrane", "go_biological_process": "GO:0007411 axon guidance", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AYL2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVN9-1", "uniprot_id": [ { "id": "A0A8M3AVN9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVN9", "type": "external" } ], "mass": 41633.0, "length": 370, "protein_name": "Uncharacterized protein cd58", "gene_name": "cd58", "organism": "Zebrafish", "refseq_name": "uncharacterized protein cd58", "refseq_ac": [ { "id": "XP_009302667", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302667", "type": "external" } ], "gene_names_uniprotkb": "cd58", "gene_names_refseq": "cd58", "protein_names_uniprotkb": "Uncharacterized protein cd58", "protein_names_refseq": "uncharacterized protein cd58", "tax_id": 7955, "disease": "", "pathway": " (dre:572028)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVN9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVP4-1", "uniprot_id": [ { "id": "A0A8M3AVP4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVP4", "type": "external" } ], "mass": 173753.0, "length": 1589, "protein_name": "Disco-interacting protein 2 homolog A isoform X1", "gene_name": "dip2a", "organism": "Zebrafish", "refseq_name": "disco-interacting protein 2 homolog A isoform X1", "refseq_ac": [ { "id": "XP_009302675", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302675", "type": "external" } ], "gene_names_uniprotkb": "dip2a", "gene_names_refseq": "dip2a", "protein_names_uniprotkb": "Disco-interacting protein 2 homolog A isoform X1", "protein_names_refseq": "disco-interacting protein 2 homolog A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100332244)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009302675.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0009986 cell surface;GO:0043005 neuron projection", "go_biological_process": "GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVP4-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2G2-1", "uniprot_id": [ { "id": "A0A8M3B2G2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2G2", "type": "external" } ], "mass": 64694.0, "length": 582, "protein_name": "Myc box-dependent-interacting protein 1", "gene_name": "bin1a", "organism": "Zebrafish", "refseq_name": "myc box-dependent-interacting protein 1 isoform X1", "refseq_ac": [ { "id": "XP_009302754", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302754", "type": "external" } ], "gene_names_uniprotkb": "bin1a", "gene_names_refseq": "bin1a", "protein_names_uniprotkb": "Myc box-dependent-interacting protein 1; Amphiphysin II; Amphiphysin-like protein; Bridging integrator 1", "protein_names_refseq": "myc box-dependent-interacting protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:563561)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005543 phospholipid binding;GO:0048156 tau protein binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005768 endosome;GO:0030424 axon;GO:0030315 T-tubule;GO:0005886 plasma membrane", "go_biological_process": "GO:0006897 endocytosis;GO:0030154 cell differentiation;GO:0051649 establishment of localization in cell", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2G2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVS3-1", "uniprot_id": [ { "id": "A0A8M3AVS3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVS3", "type": "external" } ], "mass": 57452.0, "length": 504, "protein_name": "Cytochrome P450 2J4 isoform X1", "gene_name": "LOC103909721", "organism": "Zebrafish", "refseq_name": "cytochrome P450 2J4 isoform X1", "refseq_ac": [ { "id": "XP_073795522", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_073795522", "type": "external" } ], "gene_names_uniprotkb": "LOC103909721", "gene_names_refseq": "LOC103909721", "protein_names_uniprotkb": "Cytochrome P450 2J4 isoform X1", "protein_names_refseq": "cytochrome P450 2J4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:103909721); (R-DRE-211935); (R-DRE-211981); (R-DRE-211999); (R-DRE-9027307); (R-DRE-9749641)", "pathway_count": 6, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A2R8Q5Q6;A0AC58IMU7", "ec_number_list": [], "go_molecular_function": "GO:0005506 iron ion binding;GO:0020037 heme binding;GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen;GO:0004497 monooxygenase activity;GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen", "go_cellular_component": "GO:0005737 cytoplasm;GO:0016020 membrane", "go_biological_process": "GO:0006805 xenobiotic metabolic process;GO:0006082 organic acid metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVS3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVT3-1", "uniprot_id": [ { "id": "A0A8M3AVT3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVT3", "type": "external" } ], "mass": 82134.0, "length": 731, "protein_name": "Uncharacterized protein gp1ba", "gene_name": "gp1ba", "organism": "Zebrafish", "refseq_name": "uncharacterized protein gp1ba", "refseq_ac": [ { "id": "XP_009295421", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295421", "type": "external" } ], "gene_names_uniprotkb": "gp1ba", "gene_names_refseq": "gp1ba", "protein_names_uniprotkb": "Uncharacterized protein gp1ba", "protein_names_refseq": "uncharacterized protein gp1ba", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295421.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IMT0;A0AC58IMT3", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0007596 blood coagulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVT3-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVU4-1", "uniprot_id": [ { "id": "A0A8M3AVU4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVU4", "type": "external" } ], "mass": 60581.0, "length": 532, "protein_name": "PB1 domain-containing protein", "gene_name": "LOC101885296", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009295485", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295485", "type": "external" } ], "gene_names_uniprotkb": "LOC101885296", "gene_names_refseq": "LOC101885296", "protein_names_uniprotkb": "PB1 domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101883431); (dre:101885296)", "pathway_count": 2, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295485.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVU4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVU8-1", "uniprot_id": [ { "id": "A0A8M3AVU8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVU8", "type": "external" } ], "mass": 71699.0, "length": 627, "protein_name": "MAGUK p55 subfamily member 4 isoform X1", "gene_name": "mpp4a", "organism": "Zebrafish", "refseq_name": "MAGUK p55 subfamily member 4 isoform X1", "refseq_ac": [ { "id": "XP_021334530", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021334530", "type": "external" } ], "gene_names_uniprotkb": "mpp4a", "gene_names_refseq": "mpp4a", "protein_names_uniprotkb": "MAGUK p55 subfamily member 4 isoform X1", "protein_names_refseq": "MAGUK p55 subfamily member 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100535324)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A286Y9N6", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005912 adherens junction", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVU8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVW0-1", "uniprot_id": [ { "id": "A0A8M3AVW0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVW0", "type": "external" } ], "mass": 46174.0, "length": 403, "protein_name": "Protein phosphatase 1 regulatory subunit 36 isoform X1", "gene_name": "ppp1r36", "organism": "Zebrafish", "refseq_name": "protein phosphatase 1 regulatory subunit 36 isoform X1", "refseq_ac": [ { "id": "XP_009292739", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292739", "type": "external" } ], "gene_names_uniprotkb": "ppp1r36", "gene_names_refseq": "ppp1r36", "protein_names_uniprotkb": "Protein phosphatase 1 regulatory subunit 36 isoform X1", "protein_names_refseq": "protein phosphatase 1 regulatory subunit 36 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101885519)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133194) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009292739.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019902 phosphatase binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AVW0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AVX8-1", "uniprot_id": [ { "id": "A0A8M3AVX8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AVX8", "type": "external" } ], "mass": 34733.0, "length": 296, "protein_name": "Syntaxin-19", "gene_name": "stx19", "organism": "Zebrafish", "refseq_name": "syntaxin-19", "refseq_ac": [ { "id": "XP_009302853", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302853", "type": "external" } ], "gene_names_uniprotkb": "stx19", "gene_names_refseq": "stx19", "protein_names_uniprotkb": "Syntaxin-19", "protein_names_refseq": "syntaxin-19", "tax_id": 7955, "disease": "", "pathway": " (dre:570366)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009302853.2. 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This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003712 transcription coregulator activity", "go_cellular_component": "GO:0032783 super elongation complex", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0050877 nervous system process;GO:0048666 neuron development;GO:0006354 DNA-templated transcription elongation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AW05-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AW20-1", "uniprot_id": [ { "id": "A0A8M3AW20_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AW20", "type": "external" } ], "mass": 56153.0, "length": 516, "protein_name": "Tyr recombinase domain-containing protein", "gene_name": "LOC103911649", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "LOC103911649", "gene_names_refseq": "", "protein_names_uniprotkb": "Tyr recombinase domain-containing protein", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:103911649)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "", "go_biological_process": "GO:0006310 DNA recombination;GO:0015074 DNA integration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AW20-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AW26-1", "uniprot_id": [ { "id": "A0A8M3AW26_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AW26", "type": "external" } ], "mass": 35854.0, "length": 319, "protein_name": "PiggyBac transposable element-derived protein domain-containing protein", "gene_name": "LOC103909294", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009292848", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292848", "type": "external" } ], "gene_names_uniprotkb": "LOC103909294", "gene_names_refseq": "LOC103909294", "protein_names_uniprotkb": "PiggyBac transposable element-derived protein domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103909294)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: 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This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009292848.1. 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This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009303247.3. 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This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AWD9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AWI4-1", "uniprot_id": [ { "id": "A0A8M3AWI4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AWI4", "type": "external" } ], "mass": 46165.0, "length": 408, "protein_name": "DDE Tnp4 domain-containing protein", "gene_name": "LOC103911715", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009303385", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303385", "type": "external" } ], "gene_names_uniprotkb": "LOC103911715", "gene_names_refseq": "LOC103911715", "protein_names_uniprotkb": "DDE Tnp4 domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103911715)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0016787 hydrolase activity;GO:0046872 metal ion binding;GO:0004518 nuclease activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AWI4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AWI5-1", "uniprot_id": [ { "id": "A0A8M3AWI5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AWI5", "type": "external" } ], "mass": 108363.0, "length": 967, "protein_name": "Rho GTPase-activating protein 39", "gene_name": "arhgap39", "organism": "Zebrafish", "refseq_name": "rho GTPase-activating protein 39", "refseq_ac": [ { "id": "XP_009293293", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293293", "type": "external" } ], "gene_names_uniprotkb": "arhgap39", "gene_names_refseq": "arhgap39", "protein_names_uniprotkb": "Rho GTPase-activating protein 39", "protein_names_refseq": "rho GTPase-activating protein 39", "tax_id": 7955, "disease": "", "pathway": " (dre:101884459)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009293293.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0005856 cytoskeleton", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AWI5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AWJ6-1", "uniprot_id": [ { "id": "A0A8M3AWJ6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AWJ6", "type": "external" } ], "mass": 57232.0, "length": 493, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101884484", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009293360", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293360", "type": "external" } ], "gene_names_uniprotkb": "LOC101884484", "gene_names_refseq": "LOC101884484", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884484)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AWJ6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AWK6-1", "uniprot_id": [ { "id": "A0A8M3AWK6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AWK6", "type": "external" } ], "mass": 84409.0, "length": 702, "protein_name": "C-type lectin domain-containing protein", "gene_name": "LOC103911722", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009303414", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303414", "type": "external" } ], "gene_names_uniprotkb": "LOC103911722", "gene_names_refseq": "LOC103911722", "protein_names_uniprotkb": "C-type lectin domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103911722)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009303414.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AWK6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AWN8-1", "uniprot_id": [ { "id": "A0A8M3AWN8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AWN8", "type": "external" } ], "mass": 52044.0, "length": 475, "protein_name": "Lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 isoform X1", "gene_name": "slc46a3", "organism": "Zebrafish", "refseq_name": "lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 isoform X1", "refseq_ac": [ { "id": "XP_009303566", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303566", "type": "external" } ], "gene_names_uniprotkb": "slc46a3", "gene_names_refseq": "slc46a3", "protein_names_uniprotkb": "Lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 isoform X1", "protein_names_refseq": "lysosomal proton-coupled steroid conjugate and bile acid symporter SLC46A3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556282)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009303566.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GM41;A0AC58GM44;A0AC58GM47;E7EYZ9", "ec_number_list": [], "go_molecular_function": "GO:0022857 transmembrane transporter activity;GO:0015293 symporter activity", "go_cellular_component": "GO:0005765 lysosomal membrane", "go_biological_process": "GO:0034486 vacuolar transmembrane transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AWN8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AWP4-1", "uniprot_id": [ { "id": "A0A8M3AWP4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AWP4", "type": "external" } ], "mass": 98114.0, "length": 858, "protein_name": "Uncharacterized protein mettl21ca isoform X1", "gene_name": "mettl21ca", "organism": "Zebrafish", "refseq_name": "uncharacterized protein mettl21ca isoform X1", "refseq_ac": [ { "id": "XP_009303521", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303521", "type": "external" } ], "gene_names_uniprotkb": "mettl21ca", "gene_names_refseq": "mettl21ca", "protein_names_uniprotkb": "Uncharacterized protein mettl21ca isoform X1", "protein_names_refseq": "uncharacterized protein mettl21ca isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100149425)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008276 protein methyltransferase activity", "go_cellular_component": "", "go_biological_process": "GO:0032259 methylation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AWP4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AWQ6-1", "uniprot_id": [ { "id": "A0A8M3AWQ6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AWQ6", "type": "external" } ], "mass": 22796.0, "length": 216, "protein_name": "P2R1A-PPP2R2A-interacting phosphatase regulator 1", "gene_name": "LOC101883815", "organism": "Zebrafish", "refseq_name": "P2R1A-PPP2R2A-interacting phosphatase regulator 1", "refseq_ac": [ { "id": "XP_009303551", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303551", "type": "external" } ], "gene_names_uniprotkb": "LOC101883815", "gene_names_refseq": "LOC101883815", "protein_names_uniprotkb": "P2R1A-PPP2R2A-interacting phosphatase regulator 1", "protein_names_refseq": "P2R1A-PPP2R2A-interacting phosphatase regulator 1", "tax_id": 7955, "disease": "", "pathway": " (dre:101883815)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AWQ6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AX50-1", "uniprot_id": [ { "id": "A0A8M3AX50_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AX50", "type": "external" } ], "mass": 83239.0, "length": 735, "protein_name": "F-BAR and double SH3 domains protein 2", "gene_name": "si:ch211-176g13.8", "organism": "Zebrafish", "refseq_name": "F-BAR and double SH3 domains protein 2 isoform X1", "refseq_ac": [ { "id": "XP_009303847", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303847", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-176g13.8", "gene_names_refseq": "si:ch211-176g13.8", "protein_names_uniprotkb": "F-BAR and double SH3 domains protein 2; Protein nervous wreck 1; SH3 multiple domains protein 3", "protein_names_refseq": "F-BAR and double SH3 domains protein 2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100536596)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Adapter protein that plays a role in endocytosis via clathrin-coated pits. Contributes to the internalization of cell surface receptors, such as integrin ITGB1 and transferrin receptor. Promotes endocytosis of EGFR in cancer cells, and thereby contributes to the down-regulation of EGFR signaling. Recruited to clathrin-coated pits during a mid-to-late stage of assembly, where it is required for normal progress from U-shaped intermediate stage pits to terminal, omega-shaped pits. Binds to membranes enriched in phosphatidylinositol 3,4-bisphosphate or phosphatidylinositol 3,4,5-trisphosphate. When bound to membranes, promotes actin polymerization via its interaction with WAS and/or WASL which leads to the activation of the Arp2/3 complex. Does not promote actin polymerisation in the absence of membranes., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008289 lipid binding", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005905 clathrin-coated pit;GO:0031594 neuromuscular junction;GO:0055037 recycling endosome;GO:0032420 stereocilium", "go_biological_process": "GO:1902905 positive regulation of supramolecular fiber organization;GO:0051495 positive regulation of cytoskeleton organization;GO:0006897 endocytosis;GO:0007274 neuromuscular synaptic transmission;GO:0015031 protein transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AX50-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AX62-1", "uniprot_id": [ { "id": "A0A8M3AX62_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AX62", "type": "external" } ], "mass": 56540.0, "length": 504, "protein_name": "prenylcysteine oxidase", "gene_name": "pcyox1l", "organism": "Zebrafish", "refseq_name": "prenylcysteine oxidase 1-like isoform X1", "refseq_ac": [ { "id": "XP_009293956", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293956", "type": "external" } ], "gene_names_uniprotkb": "pcyox1l", "gene_names_refseq": "pcyox1l", "protein_names_uniprotkb": "prenylcysteine oxidase; 1.8.3.5", "protein_names_refseq": "prenylcysteine oxidase 1-like isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884193)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009293956.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "1.8.3.5", "url": "https://www.rhea-db.org/rhea/?query=ec:1.8.3.5", "type": "external" } ], "go_molecular_function": "GO:0001735 prenylcysteine oxidase activity", "go_cellular_component": "", "go_biological_process": "GO:0030328 prenylcysteine catabolic process;GO:0030327 prenylated protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AX62-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AX74-1", "uniprot_id": [ { "id": "A0A8M3AX74_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AX74", "type": "external" } ], "mass": 39897.0, "length": 351, "protein_name": "Trace amine-associated receptor 13c", "gene_name": "LOC100149676", "organism": "Zebrafish", "refseq_name": "trace amine-associated receptor 13c", "refseq_ac": [ { "id": "XP_021335130", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335130", "type": "external" } ], "gene_names_uniprotkb": "LOC100149676", "gene_names_refseq": "LOC100149676", "protein_names_uniprotkb": "Trace amine-associated receptor 13c", "protein_names_refseq": "trace amine-associated receptor 13c", "tax_id": 7955, "disease": "", "pathway": " (dre:100149676)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 4% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_021335130.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001594 trace-amine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AX74-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AX92-1", "uniprot_id": [ { "id": "A0A8M3AX92_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AX92", "type": "external" } ], "mass": 26128.0, "length": 232, "protein_name": "Uncharacterized protein si:ch1073-456m8.1", "gene_name": "si:ch1073-456m8.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch1073-456m8.1", "refseq_ac": [ { "id": "XP_009303988", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303988", "type": "external" } ], "gene_names_uniprotkb": "si:ch1073-456m8.1", "gene_names_refseq": "si:ch1073-456m8.1", "protein_names_uniprotkb": "Uncharacterized protein si:ch1073-456m8.1", "protein_names_refseq": "uncharacterized protein si:ch1073-456m8.1", "tax_id": 7955, "disease": "", "pathway": " (dre:103911796)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AX92-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXE7-1", "uniprot_id": [ { "id": "A0A8M3AXE7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXE7", "type": "external" } ], "mass": 26432.0, "length": 227, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC103909513", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009294161", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294161", "type": "external" } ], "gene_names_uniprotkb": "LOC103909513", "gene_names_refseq": "LOC103909513", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IFQ8", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXE7-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXG0-1", "uniprot_id": [ { "id": "A0A8M3AXG0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXG0", "type": "external" } ], "mass": 302327.0, "length": 2677, "protein_name": "Telomerase protein component 1", "gene_name": "tep1", "organism": "Zebrafish", "refseq_name": "telomerase protein component 1", "refseq_ac": [ { "id": "XP_009296950", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296950", "type": "external" } ], "gene_names_uniprotkb": "tep1", "gene_names_refseq": "tep1", "protein_names_uniprotkb": "Telomerase protein component 1", "protein_names_refseq": "telomerase protein component 1", "tax_id": 7955, "disease": "stomach cancer (Disease Ontology:DOID:10534); intrahepatic cholangiocarcinoma (Disease Ontology:DOID:4928); hepatocellular carcinoma (Disease Ontology:DOID:684)", "pathway": " (dre:100321823)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_009296950.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0070034 telomerase RNA binding", "go_cellular_component": "GO:0005697 telomerase holoenzyme complex", "go_biological_process": "GO:0006278 RNA-templated DNA biosynthetic process;GO:0000722 telomere maintenance via recombination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXG0-1", "record_type": "protein", "filter_code": "0000000.0000011.001000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXH3-1", "uniprot_id": [ { "id": "A0A8M3AXH3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXH3", "type": "external" } ], "mass": 52155.0, "length": 466, "protein_name": "HERV-H LTR-associating protein 1", "gene_name": "hhla1", "organism": "Zebrafish", "refseq_name": "HERV-H LTR-associating protein 1", "refseq_ac": [ { "id": "XP_009297017", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297017", "type": "external" } ], "gene_names_uniprotkb": "hhla1", "gene_names_refseq": "hhla1", "protein_names_uniprotkb": "HERV-H LTR-associating protein 1", "protein_names_refseq": "HERV-H LTR-associating protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:103910106)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXH3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXJ2-1", "uniprot_id": [ { "id": "A0A8M3AXJ2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXJ2", "type": "external" } ], "mass": 36349.0, "length": 317, "protein_name": "Probable G-protein coupled receptor 148", "gene_name": "LOC101885431", "organism": "Zebrafish", "refseq_name": "probable G-protein coupled receptor 148", "refseq_ac": [ { "id": "XP_009297099", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297099", "type": "external" } ], "gene_names_uniprotkb": "LOC101885431", "gene_names_refseq": "LOC101885431", "protein_names_uniprotkb": "Probable G-protein coupled receptor 148", "protein_names_refseq": "probable G-protein coupled receptor 148", "tax_id": 7955, "disease": "", "pathway": " (dre:101885431)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004984 olfactory receptor activity;GO:0005549 odorant binding", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0050911 detection of chemical stimulus involved in sensory perception of smell", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXJ2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXK4-1", "uniprot_id": [ { "id": "A0A8M3AXK4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXK4", "type": "external" } ], "mass": 15102.0, "length": 135, "protein_name": "Chemokine-like protein TAFA-1", "gene_name": "tafa1b", "organism": "Zebrafish", "refseq_name": "chemokine-like protein TAFA-1", "refseq_ac": [ { "id": "XP_009304221", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304221", "type": "external" } ], "gene_names_uniprotkb": "tafa1b", "gene_names_refseq": "tafa1b", "protein_names_uniprotkb": "Chemokine-like protein TAFA-1", "protein_names_refseq": "chemokine-like protein TAFA-1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GSJ5;A0AC58GSK5", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXK4-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXL5-1", "uniprot_id": [ { "id": "A0A8M3AXL5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXL5", "type": "external" } ], "mass": 24238.0, "length": 215, "protein_name": "Heme-binding protein 1", "gene_name": "soul5l", "organism": "Zebrafish", "refseq_name": "heme-binding protein 2", "refseq_ac": [ { "id": "XP_009294483", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294483", "type": "external" } ], "gene_names_uniprotkb": "soul5l", "gene_names_refseq": "soul5l", "protein_names_uniprotkb": "Heme-binding protein 1", "protein_names_refseq": "heme-binding protein 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100007591)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May bind free porphyrinogens that may be present in the cell and thus facilitate removal of these potentially toxic compound. Binds with a high affinity to one molecule of heme or porphyrins. It binds metalloporphyrins, free porphyrins and N-methylprotoporphyrin with similar affinities., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0020037 heme binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXL5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXM5-1", "uniprot_id": [ { "id": "A0A8M3AXM5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXM5", "type": "external" } ], "mass": 48746.0, "length": 414, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC792627", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009297245", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297245", "type": "external" } ], "gene_names_uniprotkb": "LOC792627", "gene_names_refseq": "LOC792627", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:792627)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009297245.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXM5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXP6-1", "uniprot_id": [ { "id": "A0A8M3AXP6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXP6", "type": "external" } ], "mass": 107090.0, "length": 954, "protein_name": "Zinc finger CCCH-type containing 7Ba", "gene_name": "zc3h7ba", "organism": "Zebrafish", "refseq_name": "zinc finger CCCH-type containing 7Ba isoform 1", "refseq_ac": [ { "id": "NP_001430480", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001430480", "type": "external" } ], "gene_names_uniprotkb": "zc3h7ba", "gene_names_refseq": "fd11f03; wu:fd11f03; zc3h7ba; zgc:162198", "protein_names_uniprotkb": "Zinc finger CCCH-type containing 7Ba", "protein_names_refseq": "zinc finger CCCH-type containing 7Ba isoform 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100003994)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01045752.1, GDQH01016158.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Sep 22, 2025 this sequence version replaced XP_009297350.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0035198 miRNA binding", "go_cellular_component": "", "go_biological_process": "GO:0035196 miRNA processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXP6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXQ2-1", "uniprot_id": [ { "id": "A0A8M3AXQ2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXQ2", "type": "external" } ], "mass": 32889.0, "length": 293, "protein_name": "Interferon-induced protein 44", "gene_name": "ifi44a7", "organism": "Zebrafish", "refseq_name": "interferon-induced protein 44", "refseq_ac": [ { "id": "XP_009304400", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304400", "type": "external" } ], "gene_names_uniprotkb": "ifi44a7", "gene_names_refseq": "ifi44a7", "protein_names_uniprotkb": "Interferon-induced protein 44", "protein_names_refseq": "interferon-induced protein 44", "tax_id": 7955, "disease": "", "pathway": " (dre:100150009)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXQ2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXR1-1", "uniprot_id": [ { "id": "A0A8M3AXR1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXR1", "type": "external" } ], "mass": 168335.0, "length": 1558, "protein_name": "Caskin-1 isoform X1", "gene_name": "si:dkeyp-9d4.3", "organism": "Zebrafish", "refseq_name": "caskin-1 isoform X1", "refseq_ac": [ { "id": "XP_009304428", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304428", "type": "external" } ], "gene_names_uniprotkb": "si:dkeyp-9d4.3", "gene_names_refseq": "si:dkeyp-9d4.3", "protein_names_uniprotkb": "Caskin-1 isoform X1", "protein_names_refseq": "caskin-1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100148061)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0098978 glutamatergic synapse;GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXR1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXT9-1", "uniprot_id": [ { "id": "A0A8M3AXT9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXT9", "type": "external" } ], "mass": 28896.0, "length": 262, "protein_name": "Granzyme-like protein 1", "gene_name": "si:dkey-78l4.8", "organism": "Zebrafish", "refseq_name": "granzyme-like protein 1", "refseq_ac": [ { "id": "XP_009294635", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294635", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-78l4.8", "gene_names_refseq": "si:dkey-78l4.8", "protein_names_uniprotkb": "Granzyme-like protein 1", "protein_names_refseq": "granzyme-like protein 1", "tax_id": 7955, "disease": "", "pathway": " (dre:100034628)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009294635.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0006508 proteolysis;GO:0051604 protein maturation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXT9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXU4-1", "uniprot_id": [ { "id": "A0A8M3AXU4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXU4", "type": "external" } ], "mass": 36624.0, "length": 319, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC570723", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009294668", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294668", "type": "external" } ], "gene_names_uniprotkb": "LOC570723", "gene_names_refseq": "LOC570723", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:570723)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0043565 sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005694 chromosome", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0045893 positive regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXU4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXX2-1", "uniprot_id": [ { "id": "A0A8M3AXX2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXX2", "type": "external" } ], "mass": 95117.0, "length": 839, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC797542", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_021329221", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021329221", "type": "external" } ], "gene_names_uniprotkb": "LOC797542; si:dkey-38n4.2", "gene_names_refseq": "LOC797542", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:797542)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXX2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AXZ6-1", "uniprot_id": [ { "id": "A0A8M3AXZ6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AXZ6", "type": "external" } ], "mass": 46174.0, "length": 412, "protein_name": "Soluble calcium-activated nucleotidase 1", "gene_name": "cant1b", "organism": "Zebrafish", "refseq_name": "soluble calcium-activated nucleotidase 1b isoform X1", "refseq_ac": [ { "id": "XP_009304599", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304599", "type": "external" } ], "gene_names_uniprotkb": "cant1b; zgc:101021", "gene_names_refseq": "cant1b; zgc:101021", "protein_names_uniprotkb": "Soluble calcium-activated nucleotidase 1; 3.6.1.6; Apyrase homolog", "protein_names_refseq": "soluble calcium-activated nucleotidase 1b isoform X1", "tax_id": 7955, "disease": "Desbuquois dysplasia (Disease Ontology:DOID:0060462); multiple epiphyseal dysplasia 7 (Disease Ontology:DOID:0070302)", "pathway": " (dre:445201)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009304599.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [ { "id": "3.6.1.5", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.5", "type": "external" }, { "id": "3.6.1.6", "url": "https://www.rhea-db.org/rhea/?query=ec:3.6.1.6", "type": "external" } ], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0004382 GDP phosphatase activity;GO:0045134 UDP phosphatase activity", "go_cellular_component": "", "go_biological_process": "GO:0030166 proteoglycan biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AXZ6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AY04-1", "uniprot_id": [ { "id": "A0A8M3AY04_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AY04", "type": "external" } ], "mass": 139294.0, "length": 1226, "protein_name": "Transient receptor potential cation channel subfamily M member 4 isoform X1", "gene_name": "trpm4b.1", "organism": "Zebrafish", "refseq_name": "transient receptor potential cation channel subfamily M member 4 isoform X1", "refseq_ac": [ { "id": "XP_009304689", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304689", "type": "external" } ], "gene_names_uniprotkb": "trpm4b.1", "gene_names_refseq": "trpm4b.1", "protein_names_uniprotkb": "Transient receptor potential cation channel subfamily M member 4 isoform X1", "protein_names_refseq": "transient receptor potential cation channel subfamily M member 4 isoform X1", "tax_id": 7955, "disease": "cardiac arrest (Disease Ontology:DOID:0060319); erythrokeratodermia variabilis et progressiva 6 (Disease Ontology:DOID:0080766); progressive familial heart block type IB (Disease Ontology:DOID:0111076)", "pathway": " (dre:102659287)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005227 calcium-activated cation channel activity;GO:0005216 monoatomic ion channel activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0016020 membrane", "go_biological_process": "GO:0098655 monoatomic cation transmembrane transport;GO:0030001 metal ion transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AY04-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AY22-1", "uniprot_id": [ { "id": "A0A8M3AY22_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AY22", "type": "external" } ], "mass": 46861.0, "length": 405, "protein_name": "Uncharacterized protein si:cabz01071911.4", "gene_name": "si:cabz01071911.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:cabz01071911.4", "refseq_ac": [ { "id": "XP_009297802", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297802", "type": "external" } ], "gene_names_uniprotkb": "si:cabz01071911.4", "gene_names_refseq": "si:cabz01071911.4", "protein_names_uniprotkb": "Uncharacterized protein si:cabz01071911.4", "protein_names_refseq": "uncharacterized protein si:cabz01071911.4", "tax_id": 7955, "disease": "", "pathway": " (dre:103910265)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009297802.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0000122 negative regulation of transcription by RNA polymerase II;GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AY22-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AY38-1", "uniprot_id": [ { "id": "A0A8M3AY38_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AY38", "type": "external" } ], "mass": 74355.0, "length": 658, "protein_name": "Protein tyrosine phosphatase domain-containing protein 1", "gene_name": "ptpdc1b", "organism": "Zebrafish", "refseq_name": "protein tyrosine phosphatase domain-containing protein 1-like isoform X2", "refseq_ac": [ { "id": "XP_009294876", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294876", "type": "external" } ], "gene_names_uniprotkb": "ptpdc1b", "gene_names_refseq": "ptpdc1b", "protein_names_uniprotkb": "Protein tyrosine phosphatase domain-containing protein 1", "protein_names_refseq": "protein tyrosine phosphatase domain-containing protein 1-like isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:570928)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May play roles in cilia formation and/or maintenance., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004725 protein tyrosine phosphatase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0060271 cilium assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AY38-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AYA2-1", "uniprot_id": [ { "id": "A0A8M3AYA2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AYA2", "type": "external" } ], "mass": 61126.0, "length": 539, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC793338", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009297996", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297996", "type": "external" } ], "gene_names_uniprotkb": "LOC793338", "gene_names_refseq": "LOC793338", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:793338)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AYA2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AYE0-1", "uniprot_id": [ { "id": "A0A8M3AYE0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AYE0", "type": "external" } ], "mass": 13057.0, "length": 120, "protein_name": "Triggering receptor expressed on myeloid cells 2", "gene_name": "trem2", "organism": "Zebrafish", "refseq_name": "triggering receptor expressed on myeloid cells 2 precursor", "refseq_ac": [ { "id": "NP_001429402", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429402", "type": "external" } ], "gene_names_uniprotkb": "trem2", "gene_names_refseq": "trem2", "protein_names_uniprotkb": "Triggering receptor expressed on myeloid cells 2", "protein_names_refseq": "triggering receptor expressed on myeloid cells 2 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:101883794)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588728.36219814.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708828 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Aug 8, 2025 this sequence version replaced XP_009298122.2., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0019814 immunoglobulin complex", "go_biological_process": "GO:0006955 immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AYE0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AYF4-1", "uniprot_id": [ { "id": "A0A8M3AYF4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AYF4", "type": "external" } ], "mass": 46830.0, "length": 410, "protein_name": "E3 ubiquitin-protein ligase TRIM7", "gene_name": "si:dkey-219e21.4", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase TRIM7", "refseq_ac": [ { "id": "XP_009305001", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305001", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-219e21.4", "gene_names_refseq": "si:dkey-219e21.4", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase TRIM7", "protein_names_refseq": "E3 ubiquitin-protein ligase TRIM7", "tax_id": 7955, "disease": "", "pathway": " (dre:101883495)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009305001.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0R4IJ31", "ec_number_list": [], "go_molecular_function": "GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AYF4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AYI5-1", "uniprot_id": [ { "id": "A0A8M3AYI5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AYI5", "type": "external" } ], "mass": 145949.0, "length": 1321, "protein_name": "Ubiquitin carboxyl-terminal hydrolase 54 isoform X1", "gene_name": "usp54b", "organism": "Zebrafish", "refseq_name": "ubiquitin carboxyl-terminal hydrolase 54 isoform X1", "refseq_ac": [ { "id": "XP_009305020", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305020", "type": "external" } ], "gene_names_uniprotkb": "usp54b", "gene_names_refseq": "usp54b", "protein_names_uniprotkb": "Ubiquitin carboxyl-terminal hydrolase 54 isoform X1", "protein_names_refseq": "ubiquitin carboxyl-terminal hydrolase 54 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100535699)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "X1WG46", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007160 cell-matrix adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AYM0-1", "record_type": "protein", "filter_code": "0000000.0000001.000100.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AYM9-1", "uniprot_id": [ { "id": "A0A8M3AYM9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AYM9", "type": "external" } ], "mass": 50709.0, "length": 453, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC100536599", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009305186", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305186", "type": "external" } ], "gene_names_uniprotkb": "LOC100536599", "gene_names_refseq": "LOC100536599", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100536599)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0009986 cell surface;GO:0016324 apical plasma membrane;GO:0098552 side of membrane;GO:0005576 extracellular region", "go_biological_process": "GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AYN9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AYS2-1", "uniprot_id": [ { "id": "A0A8M3AYS2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AYS2", "type": "external" } ], "mass": 121401.0, "length": 1109, "protein_name": "Muscular LMNA-interacting protein isoform X1", "gene_name": "mlip", "organism": "Zebrafish", "refseq_name": "muscular LMNA-interacting protein isoform X1", "refseq_ac": [ { "id": "XP_009305329", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305329", "type": "external" } ], "gene_names_uniprotkb": "mlip", "gene_names_refseq": "mlip", "protein_names_uniprotkb": "Muscular LMNA-interacting protein isoform X1", "protein_names_refseq": "muscular LMNA-interacting protein isoform X1", "tax_id": 7955, "disease": "myopathy with myalgia, increased serum creatine kinase, and with or without episodic rhabdomyolysis 1 (Disease Ontology:DOID:0061183)", "pathway": " (dre:492702)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009305329.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AYS2-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AYU1-1", "uniprot_id": [ { "id": "A0A8M3AYU1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AYU1", "type": "external" } ], "mass": 240868.0, "length": 2181, "protein_name": "Brefeldin A-inhibited guanine nucleotide-exchange protein 3", "gene_name": "arfgef3", "organism": "Zebrafish", "refseq_name": "brefeldin A-inhibited guanine nucleotide-exchange protein 3", "refseq_ac": [ { "id": "XP_009305336", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305336", "type": "external" } ], "gene_names_uniprotkb": "arfgef3", "gene_names_refseq": "arfgef3", "protein_names_uniprotkb": "Brefeldin A-inhibited guanine nucleotide-exchange protein 3", "protein_names_refseq": "brefeldin A-inhibited guanine nucleotide-exchange protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:562652)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009305336.1. 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This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009298981.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 3, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005929 cilium;GO:0002142 stereocilia ankle link complex;GO:0032426 stereocilium tip;GO:0042995 cell projection", "go_biological_process": "GO:0007605 sensory perception of sound;GO:0060088 auditory receptor cell stereocilium organization", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AYZ6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZ47-1", "uniprot_id": [ { "id": "A0A8M3AZ47_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZ47", "type": "external" } ], "mass": 102649.0, "length": 932, "protein_name": "Suppressor of tumorigenicity 14 protein homolog isoform X1", "gene_name": "LOC100331291", "organism": "Zebrafish", "refseq_name": "suppressor of tumorigenicity 14 protein homolog isoform X1", "refseq_ac": [ { "id": "XP_009295692", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295692", "type": "external" } ], "gene_names_uniprotkb": "LOC100331291", "gene_names_refseq": "LOC100331291", "protein_names_uniprotkb": "Suppressor of tumorigenicity 14 protein homolog isoform X1", "protein_names_refseq": "suppressor of tumorigenicity 14 protein homolog isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100331291)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004252 serine-type endopeptidase activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0006508 proteolysis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZ47-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZ95-1", "uniprot_id": [ { "id": "A0A8M3AZ95_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZ95", "type": "external" } ], "mass": 27105.0, "length": 257, "protein_name": "Complement C1q-like protein 3", "gene_name": "c1ql3a", "organism": "Zebrafish", "refseq_name": "complement C1q-like protein 3", "refseq_ac": [ { "id": "XP_009295837", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295837", "type": "external" } ], "gene_names_uniprotkb": "c1ql3a", "gene_names_refseq": "c1ql3a", "protein_names_uniprotkb": "Complement C1q-like protein 3", "protein_names_refseq": "complement C1q-like protein 3", "tax_id": 7955, "disease": "", "pathway": " (dre:100151368)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005615 extracellular space;GO:0045202 synapse;GO:0043083 synaptic cleft", "go_biological_process": "GO:0099558 maintenance of synapse structure;GO:0099550 trans-synaptic signaling, modulating synaptic transmission", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZ95-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZA5-1", "uniprot_id": [ { "id": "A0A8M3AZA5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZA5", "type": "external" } ], "mass": 63107.0, "length": 553, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "wu:fb55g02", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009305755", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305755", "type": "external" } ], "gene_names_uniprotkb": "wu:fb55g02; fb55g02; zgc:172136", "gene_names_refseq": "fb55g02; wu:fb55g02; zgc:172136", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58H1N7", "ec_number_list": [], "go_molecular_function": "GO:0140311 protein sequestering activity", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005911 cell-cell junction", "go_biological_process": "GO:0035332 positive regulation of hippo signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZA5-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZA6-1", "uniprot_id": [ { "id": "A0A8M3AZA6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZA6", "type": "external" } ], "mass": 32464.0, "length": 286, "protein_name": "Uncharacterized protein si:dkey-187a12.4 isoform X1", "gene_name": "si:dkey-187a12.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:dkey-187a12.4 isoform X1", "refseq_ac": [ { "id": "XP_009305674", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305674", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-187a12.4", "gene_names_refseq": "si:dkey-187a12.4", "protein_names_uniprotkb": "Uncharacterized protein si:dkey-187a12.4 isoform X1", "protein_names_refseq": "uncharacterized protein si:dkey-187a12.4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100320511)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZA6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZD9-1", "uniprot_id": [ { "id": "A0A8M3AZD9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZD9", "type": "external" } ], "mass": 35032.0, "length": 309, "protein_name": "Galanin receptor 2a-like", "gene_name": "LOC101883414", "organism": "Zebrafish", "refseq_name": "galanin receptor 2a-like", "refseq_ac": [ { "id": "XP_009295985", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295985", "type": "external" } ], "gene_names_uniprotkb": "LOC101883414", "gene_names_refseq": "LOC101883414", "protein_names_uniprotkb": "Galanin receptor 2a-like", "protein_names_refseq": "galanin receptor 2a-like", "tax_id": 7955, "disease": "", "pathway": " (dre:101883414)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295985.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008188 neuropeptide receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZD9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZG2-1", "uniprot_id": [ { "id": "A0A8M3AZG2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZG2", "type": "external" } ], "mass": 180139.0, "length": 1620, "protein_name": "Kinase non-catalytic C-lobe domain-containing protein 1 isoform X1", "gene_name": "kndc1", "organism": "Zebrafish", "refseq_name": "kinase non-catalytic C-lobe domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_009305884", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305884", "type": "external" } ], "gene_names_uniprotkb": "kndc1", "gene_names_refseq": "kndc1", "protein_names_uniprotkb": "Kinase non-catalytic C-lobe domain-containing protein 1 isoform X1", "protein_names_refseq": "kinase non-catalytic C-lobe domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:799007)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity;GO:0016301 kinase activity", "go_cellular_component": "GO:0030425 dendrite;GO:0043025 neuronal cell body;GO:0032045 guanyl-nucleotide exchange factor complex", "go_biological_process": "GO:0048814 regulation of dendrite morphogenesis;GO:0007264 small GTPase-mediated signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZG2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZH5-1", "uniprot_id": [ { "id": "A0A8M3AZH5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZH5", "type": "external" } ], "mass": 38992.0, "length": 346, "protein_name": "Cytokine-dependent hematopoietic cell linker isoform X1", "gene_name": "clnk", "organism": "Zebrafish", "refseq_name": "cytokine-dependent hematopoietic cell linker isoform X1", "refseq_ac": [ { "id": "XP_009305915", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305915", "type": "external" } ], "gene_names_uniprotkb": "clnk", "gene_names_refseq": "clnk", "protein_names_uniprotkb": "Cytokine-dependent hematopoietic cell linker isoform X1", "protein_names_refseq": "cytokine-dependent hematopoietic cell linker isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101882093)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009305915.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007169 cell surface receptor protein tyrosine kinase signaling pathway;GO:0035556 intracellular signal transduction;GO:0043303 mast cell degranulation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZH5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZK3-1", "uniprot_id": [ { "id": "A0A8M3AZK3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZK3", "type": "external" } ], "mass": 22308.0, "length": 204, "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC103912050", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009305922", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305922", "type": "external" } ], "gene_names_uniprotkb": "LOC103912050", "gene_names_refseq": "LOC103912050", "protein_names_uniprotkb": "Ig-like domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103912050)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZK3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZK8-1", "uniprot_id": [ { "id": "A0A8M3AZK8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZK8", "type": "external" } ], "mass": 90980.0, "length": 824, "protein_name": "Protocadherin gamma-A4-like", "gene_name": "LOC100538188", "organism": "Zebrafish", "refseq_name": "protocadherin gamma-A4-like", "refseq_ac": [ { "id": "XP_009305938", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305938", "type": "external" } ], "gene_names_uniprotkb": "LOC100538188", "gene_names_refseq": "LOC100538188", "protein_names_uniprotkb": "Protocadherin gamma-A4-like", "protein_names_refseq": "protocadherin gamma-A4-like", "tax_id": 7955, "disease": "", "pathway": " (dre:100538188)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133189) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009305938.1. COMPLETENESS: full length., [RefSeq]; Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding;GO:0050839 cell adhesion molecule binding", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007155 cell adhesion;GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules;GO:0009653 anatomical structure morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZK8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZN4-1", "uniprot_id": [ { "id": "A0A8M3AZN4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZN4", "type": "external" } ], "mass": 70038.0, "length": 626, "protein_name": "Uncharacterized protein fbxl9 isoform X2", "gene_name": "fbxl9", "organism": "Zebrafish", "refseq_name": "uncharacterized protein fbxl9 isoform X2", "refseq_ac": [ { "id": "XP_009296234", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296234", "type": "external" } ], "gene_names_uniprotkb": "fbxl9", "gene_names_refseq": "fbxl9", "protein_names_uniprotkb": "Uncharacterized protein fbxl9 isoform X2", "protein_names_refseq": "uncharacterized protein fbxl9 isoform X2", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IY16", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0019005 SCF ubiquitin ligase complex", "go_biological_process": "GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZN4-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZQ6-1", "uniprot_id": [ { "id": "A0A8M3AZQ6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZQ6", "type": "external" } ], "mass": 124032.0, "length": 1072, "protein_name": "Uncharacterized protein si:ch211-102c2.8 isoform X1", "gene_name": "si:ch211-102c2.8", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-102c2.8 isoform X1", "refseq_ac": [ { "id": "XP_009299839", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299839", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-102c2.8", "gene_names_refseq": "si:ch211-102c2.8", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-102c2.8 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch211-102c2.8 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100002014)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZQ6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZV6-1", "uniprot_id": [ { "id": "A0A8M3AZV6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZV6", "type": "external" } ], "mass": 252213.0, "length": 2293, "protein_name": "Uncharacterized protein bdp1 isoform X1", "gene_name": "bdp1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein bdp1 isoform X1", "refseq_ac": [ { "id": "XP_009300002", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300002", "type": "external" } ], "gene_names_uniprotkb": "bdp1", "gene_names_refseq": "bdp1", "protein_names_uniprotkb": "Uncharacterized protein bdp1 isoform X1", "protein_names_refseq": "uncharacterized protein bdp1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:553492)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001156 TFIIIC-class transcription factor complex binding", "go_cellular_component": "GO:0000126 transcription factor TFIIIB complex", "go_biological_process": "GO:0070898 RNA polymerase III preinitiation complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZV6-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3AZW8-1", "uniprot_id": [ { "id": "A0A8M3AZW8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3AZW8", "type": "external" } ], "mass": 42311.0, "length": 377, "protein_name": "Arrestin domain-containing protein 3 isoform X1", "gene_name": "LOC799768", "organism": "Zebrafish", "refseq_name": "arrestin domain-containing protein 3 isoform X1", "refseq_ac": [ { "id": "XP_009300042", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300042", "type": "external" } ], "gene_names_uniprotkb": "LOC799768", "gene_names_refseq": "LOC799768", "protein_names_uniprotkb": "Arrestin domain-containing protein 3 isoform X1", "protein_names_refseq": "arrestin domain-containing protein 3 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:799768)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300042.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0060090 molecular adaptor activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0007399 nervous system development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3AZW8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2U4-1", "uniprot_id": [ { "id": "A0A8M3B2U4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2U4", "type": "external" } ], "mass": 64001.0, "length": 584, "protein_name": "Endosomal transmembrane epsin interactor 1 isoform X1", "gene_name": "fam189a2", "organism": "Zebrafish", "refseq_name": "endosomal transmembrane epsin interactor 1 isoform X1", "refseq_ac": [ { "id": "XP_009300088", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300088", "type": "external" } ], "gene_names_uniprotkb": "fam189a2", "gene_names_refseq": "fam189a2", "protein_names_uniprotkb": "Endosomal transmembrane epsin interactor 1 isoform X1", "protein_names_refseq": "endosomal transmembrane epsin interactor 1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:503960)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300088.1. 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This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300150.1. 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This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005198 structural molecule activity", "go_cellular_component": "GO:0005856 cytoskeleton;GO:0005882 intermediate filament", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B016-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B087-1", "uniprot_id": [ { "id": "A0A8M3B087_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B087", "type": "external" } ], "mass": 106194.0, "length": 963, "protein_name": "SH3 domain-containing protein 19 isoform X1", "gene_name": "sh3d19", "organism": "Zebrafish", "refseq_name": "SH3 domain-containing protein 19 isoform X1", "refseq_ac": [ { "id": "XP_009289295", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289295", "type": "external" } ], "gene_names_uniprotkb": "sh3d19; zgc:113078", "gene_names_refseq": "sh3d19; zgc:113078", "protein_names_uniprotkb": "SH3 domain-containing protein 19 isoform X1", "protein_names_refseq": "SH3 domain-containing protein 19 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:553811)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "12477932;26469318", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009289295.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030674 protein-macromolecule adaptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007010 cytoskeleton organization", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M3B087-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0B3-1", "uniprot_id": [ { "id": "A0A8M3B0B3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0B3", "type": "external" } ], "mass": 44479.0, "length": 390, "protein_name": "Interleukin-4 receptor subunit alpha", "gene_name": "LOC101886719", "organism": "Zebrafish", "refseq_name": "interleukin-4 receptor subunit alpha", "refseq_ac": [ { "id": "XP_009300536", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300536", "type": "external" } ], "gene_names_uniprotkb": "LOC101886719", "gene_names_refseq": "LOC101886719", "protein_names_uniprotkb": "Interleukin-4 receptor subunit alpha", "protein_names_refseq": "interleukin-4 receptor subunit alpha", "tax_id": 7955, "disease": "", "pathway": " (dre:101886719)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004896 cytokine receptor activity;GO:0019979 interleukin-4 binding", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0019221 cytokine-mediated signaling pathway;GO:0016064 immunoglobulin mediated immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0B3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0C4-1", "uniprot_id": [ { "id": "A0A8M3B0C4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0C4", "type": "external" } ], "mass": 126143.0, "length": 1102, "protein_name": "Uncharacterized protein triobpa isoform X1", "gene_name": "triobpa", "organism": "Zebrafish", "refseq_name": "uncharacterized protein triobpa isoform X1", "refseq_ac": [ { "id": "XP_009296900", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296900", "type": "external" } ], "gene_names_uniprotkb": "triobpa", "gene_names_refseq": "triobpa", "protein_names_uniprotkb": "Uncharacterized protein triobpa isoform X1", "protein_names_refseq": "uncharacterized protein triobpa isoform X1", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 28 (Disease Ontology:DOID:0110486)", "pathway": " (dre:555479)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0051015 actin filament binding", "go_cellular_component": "GO:0015629 actin cytoskeleton", "go_biological_process": "GO:1900026 positive regulation of substrate adhesion-dependent cell spreading", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0C4-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0F2-1", "uniprot_id": [ { "id": "A0A8M3B0F2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0F2", "type": "external" } ], "mass": 67807.0, "length": 605, "protein_name": "Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform X1", "gene_name": "nherf2", "organism": "Zebrafish", "refseq_name": "NHERF family PDZ scaffold protein 2 isoform 1", "refseq_ac": [ { "id": "NP_001429668", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429668", "type": "external" } ], "gene_names_uniprotkb": "nherf2", "gene_names_refseq": "nherf2; slc9a3r2", "protein_names_uniprotkb": "Na(+)/H(+) exchange regulatory cofactor NHE-RF2 isoform X1", "protein_names_refseq": "NHERF family PDZ scaffold protein 2 isoform 1; SLC9A3 regulator 2; solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2", "tax_id": 7955, "disease": "", "pathway": " (dre:100008366)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01015614.1, GDQH01013199.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505388, SAMEA3505390 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000001.1. On Aug 22, 2025 this sequence version replaced XP_009296992.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding;GO:0043495 protein-membrane adaptor activity", "go_cellular_component": "GO:0016324 apical plasma membrane", "go_biological_process": "GO:0072659 protein localization to plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0F2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0F5-1", "uniprot_id": [ { "id": "A0A8M3B0F5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0F5", "type": "external" } ], "mass": 86164.0, "length": 756, "protein_name": "Phosphoinositide 3-kinase regulatory subunit 6 isoform X1", "gene_name": "pik3r6a; pik3r6", "organism": "Zebrafish", "refseq_name": "phosphoinositide 3-kinase regulatory subunit 6 isoform X1", "refseq_ac": [ { "id": "XP_001345931", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001345931", "type": "external" } ], "gene_names_uniprotkb": "pik3r6a; pik3r6; zgc:158654", "gene_names_refseq": "pik3r6", "protein_names_uniprotkb": "Phosphoinositide 3-kinase regulatory subunit 6 isoform X1", "protein_names_refseq": "phosphoinositide 3-kinase regulatory subunit 6 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100007492)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001345931.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A0G2L4B6", "ec_number_list": [], "go_molecular_function": "GO:0046935 1-phosphatidylinositol-3-kinase regulator activity", "go_cellular_component": "GO:0005944 phosphatidylinositol 3-kinase complex, class IB;GO:0005942 phosphatidylinositol 3-kinase complex", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0042269 regulation of natural killer cell mediated cytotoxicity", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0F5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0H8-1", "uniprot_id": [ { "id": "A0A8M3B0H8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0H8", "type": "external" } ], "mass": 228126.0, "length": 1996, "protein_name": "Integrase catalytic domain-containing protein", "gene_name": "LOC103910115", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_068074145", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_068074145", "type": "external" } ], "gene_names_uniprotkb": "LOC103910115", "gene_names_refseq": "LOC103910115", "protein_names_uniprotkb": "Integrase catalytic domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103910115)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0003676 nucleic acid binding", "go_cellular_component": "", "go_biological_process": "GO:0015074 DNA integration", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0H8-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0J4-1", "uniprot_id": [ { "id": "A0A8M3B0J4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0J4", "type": "external" } ], "mass": 76395.0, "length": 692, "protein_name": "Leucine-rich repeat-containing protein 24 isoform X2", "gene_name": "lrrc24", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat-containing protein 24 isoform X2", "refseq_ac": [ { "id": "XP_009297158", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297158", "type": "external" } ], "gene_names_uniprotkb": "lrrc24", "gene_names_refseq": "lrrc24", "protein_names_uniprotkb": "Leucine-rich repeat-containing protein 24 isoform X2", "protein_names_refseq": "leucine-rich repeat-containing protein 24 isoform X2", "tax_id": 7955, "disease": "", "pathway": " (dre:565790)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009297158.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0J4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0L3-1", "uniprot_id": [ { "id": "A0A8M3B0L3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0L3", "type": "external" } ], "mass": 34686.0, "length": 311, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC100330694", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009300834", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300834", "type": "external" } ], "gene_names_uniprotkb": "LOC100330694", "gene_names_refseq": "LOC100330694", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100330694)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0L3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0M3-1", "uniprot_id": [ { "id": "A0A8M3B0M3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0M3", "type": "external" } ], "mass": 124665.0, "length": 1096, "protein_name": "NACHT, LRR and PYD domains-containing protein 3", "gene_name": "si:dkey-7i4.1", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "si:dkey-7i4.1", "gene_names_refseq": "", "protein_names_uniprotkb": "NACHT, LRR and PYD domains-containing protein 3", "protein_names_refseq": "", "tax_id": 7955, "disease": "Muckle-Wells syndrome (Disease Ontology:DOID:0050854); autosomal dominant nonsyndromic deafness 34 (Disease Ontology:DOID:0080270); CINCA Syndrome (Disease Ontology:DOID:0090029); familial cold autoinflammatory syndrome 1 (Disease Ontology:DOID:0090062); familial cold autoinflammatory syndrome 2 (Disease Ontology:DOID:0090063); alcoholic hepatitis (Disease Ontology:DOID:12351); urticaria (Disease Ontology:DOID:1555); myocardial infarction (Disease Ontology:DOID:5844); steatotic liver disease (Disease Ontology:DOID:9452)", "pathway": " (dre:556716)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 9, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HEC5;E7EZS1;F1R7W2", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0M3-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0N9-1", "uniprot_id": [ { "id": "A0A8M3B0N9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0N9", "type": "external" } ], "mass": 35765.0, "length": 311, "protein_name": "Probable G-protein coupled receptor 34", "gene_name": "si:dkey-83h2.2", "organism": "Zebrafish", "refseq_name": "P2Y purinoceptor 14", "refseq_ac": [ { "id": "XP_009289705", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289705", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-83h2.2", "gene_names_refseq": "si:dkey-83h2.2", "protein_names_uniprotkb": "Probable G-protein coupled receptor 34", "protein_names_refseq": "P2Y purinoceptor 14", "tax_id": 7955, "disease": "", "pathway": " (dre:101885518)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; G-protein-coupled receptor of lysophosphatidylserine (LysoPS) that plays different roles in immune response. Acts a damage-sensing receptor that triggers tissue repair upon recognition of dying neutrophils. Mechanistically, apoptotic neutrophils release lysophosphatydilserine that are recognized by type 3 innate lymphoid cells (ILC3s) via GPR34, which activates downstream PI3K-AKT and RAS-ERK signaling pathways leading to STAT3 activation and IL-22 production. Plays an important role in microglial function, controlling morphology and phagocytosis., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0045028 G protein-coupled purinergic nucleotide receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0N9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0P3-1", "uniprot_id": [ { "id": "A0A8M3B0P3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0P3", "type": "external" } ], "mass": 172562.0, "length": 1494, "protein_name": "Sterile alpha motif domain-containing protein 9", "gene_name": "LOC101882579", "organism": "Zebrafish", "refseq_name": "sterile alpha motif domain-containing protein 9", "refseq_ac": [ { "id": "XP_009297386", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297386", "type": "external" } ], "gene_names_uniprotkb": "LOC101882579", "gene_names_refseq": "LOC101882579", "protein_names_uniprotkb": "Sterile alpha motif domain-containing protein 9", "protein_names_refseq": "sterile alpha motif domain-containing protein 9", "tax_id": 7955, "disease": "", "pathway": " (dre:101882579)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0P3-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0Q8-1", "uniprot_id": [ { "id": "A0A8M3B0Q8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0Q8", "type": "external" } ], "mass": 73293.0, "length": 650, "protein_name": "BED-type domain-containing protein", "gene_name": "LOC100334312", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009300940", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300940", "type": "external" } ], "gene_names_uniprotkb": "LOC100334312", "gene_names_refseq": "LOC100334312", "protein_names_uniprotkb": "BED-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:100334312)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009300940.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0Q8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0U1-1", "uniprot_id": [ { "id": "A0A8M3B0U1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0U1", "type": "external" } ], "mass": 70638.0, "length": 616, "protein_name": "Crestin", "gene_name": "LOC103908810", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009289804", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289804", "type": "external" } ], "gene_names_uniprotkb": "LOC103908810", "gene_names_refseq": "LOC103908810", "protein_names_uniprotkb": "Crestin", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103908810)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009289804.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58HRH3;A0AC58HRH9;A0AC58HRI2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0U1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0W1-1", "uniprot_id": [ { "id": "A0A8M3B0W1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0W1", "type": "external" } ], "mass": 33930.0, "length": 302, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-88n24.5", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009301108", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301108", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-88n24.5", "gene_names_refseq": "si:dkey-88n24.5", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:572610)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G078", "ec_number_list": [], "go_molecular_function": "GO:0008017 microtubule binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0W1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0Z3-1", "uniprot_id": [ { "id": "A0A8M3B0Z3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0Z3", "type": "external" } ], "mass": 61109.0, "length": 531, "protein_name": "E3 ubiquitin-protein ligase TRIM21 isoform X1", "gene_name": "LOC100535633", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase TRIM21 isoform X1", "refseq_ac": [ { "id": "XP_009301252", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301252", "type": "external" } ], "gene_names_uniprotkb": "LOC100535633", "gene_names_refseq": "LOC100535633", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase TRIM21 isoform X1", "protein_names_refseq": "E3 ubiquitin-protein ligase TRIM21 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100535633)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G3C3;A0AC58G3C6", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0045087 innate immune response", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0Z3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B0Z8-1", "uniprot_id": [ { "id": "A0A8M3B0Z8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B0Z8", "type": "external" } ], "mass": 41700.0, "length": 357, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC103911361", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009301276", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301276", "type": "external" } ], "gene_names_uniprotkb": "LOC103911361", "gene_names_refseq": "LOC103911361", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103911361)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B0Z8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B172-1", "uniprot_id": [ { "id": "A0A8M3B172_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B172", "type": "external" } ], "mass": 40476.0, "length": 354, "protein_name": "Gap junction delta-2 protein", "gene_name": "LOC556987", "organism": "Zebrafish", "refseq_name": "gap junction delta-2 protein", "refseq_ac": [ { "id": "XP_009290046", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290046", "type": "external" } ], "gene_names_uniprotkb": "LOC556987", "gene_names_refseq": "LOC556987", "protein_names_uniprotkb": "Gap junction delta-2 protein", "protein_names_refseq": "gap junction delta-2 protein", "tax_id": 7955, "disease": "", "pathway": " (dre:556987)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005243 gap junction channel activity", "go_cellular_component": "GO:0005922 connexin complex", "go_biological_process": "GO:0007267 cell-cell signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B172-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B1E4-1", "uniprot_id": [ { "id": "A0A8M3B1E4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B1E4", "type": "external" } ], "mass": 68875.0, "length": 639, "protein_name": "WD repeat-containing protein 20", "gene_name": "zmp:0000000529", "organism": "Zebrafish", "refseq_name": "WD repeat-containing protein 20", "refseq_ac": [ { "id": "XP_009290280", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290280", "type": "external" } ], "gene_names_uniprotkb": "zmp:0000000529", "gene_names_refseq": "zmp:0000000529", "protein_names_uniprotkb": "WD repeat-containing protein 20", "protein_names_refseq": "WD repeat-containing protein 20", "tax_id": 7955, "disease": "", "pathway": " (dre:571996)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009290280.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0035800 deubiquitinase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B1E4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B1G1-1", "uniprot_id": [ { "id": "A0A8M3B1G1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B1G1", "type": "external" } ], "mass": 125019.0, "length": 1158, "protein_name": "Insulin receptor substrate 2-B", "gene_name": "irs4b", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "irs4b", "gene_names_refseq": "", "protein_names_uniprotkb": "Insulin receptor substrate 2-B", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:794462)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005158 insulin receptor binding;GO:0043548 phosphatidylinositol 3-kinase binding", "go_cellular_component": "GO:0005829 cytosol;GO:0005886 plasma membrane", "go_biological_process": "GO:0008286 insulin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B1G1-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B1N0-1", "uniprot_id": [ { "id": "A0A8M3B1N0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B1N0", "type": "external" } ], "mass": 172035.0, "length": 1548, "protein_name": "Synaptopodin-2", "gene_name": "synpo2a", "organism": "Zebrafish", "refseq_name": "synaptopodin-2", "refseq_ac": [ { "id": "XP_009301905", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301905", "type": "external" } ], "gene_names_uniprotkb": "synpo2a", "gene_names_refseq": "synpo2a", "protein_names_uniprotkb": "Synaptopodin-2", "protein_names_refseq": "synaptopodin-2", "tax_id": 7955, "disease": "", "pathway": " (dre:570526)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009301905.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 4, "predicted_n_glycosites": 0, "predicted_o_glycosites": 4, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 4, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003779 actin binding", "go_cellular_component": "GO:0005634 nucleus;GO:0015629 actin cytoskeleton;GO:0030018 Z disc", "go_biological_process": "GO:0032233 positive regulation of actin filament bundle assembly", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B1N0-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B4L0-1", "uniprot_id": [ { "id": "A0A8M3B4L0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B4L0", "type": "external" } ], "mass": 483836.0, "length": 4419, "protein_name": "Probable E3 ubiquitin-protein ligase HECTD4 isoform X1", "gene_name": "hectd4", "organism": "Zebrafish", "refseq_name": "probable E3 ubiquitin-protein ligase HECTD4 isoform X1", "refseq_ac": [ { "id": "XP_009301943", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009301943", "type": "external" } ], "gene_names_uniprotkb": "hectd4", "gene_names_refseq": "hectd4", "protein_names_uniprotkb": "Probable E3 ubiquitin-protein ligase HECTD4 isoform X1", "protein_names_refseq": "probable E3 ubiquitin-protein ligase HECTD4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101885095)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133182) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004842 ubiquitin-protein transferase activity", "go_cellular_component": "", "go_biological_process": "GO:0042593 glucose homeostasis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B4L0-1", "record_type": "protein", "filter_code": "0000000.0000001.001000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B1S8-1", "uniprot_id": [ { "id": "A0A8M3B1S8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B1S8", "type": "external" } ], "mass": 60032.0, "length": 516, "protein_name": "TBC1 domain family member 22B isoform X1", "gene_name": "tbc1d22b", "organism": "Zebrafish", "refseq_name": "TBC1 domain family member 22B isoform X1", "refseq_ac": [ { "id": "XP_009302051", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302051", "type": "external" } ], "gene_names_uniprotkb": "tbc1d22b", "gene_names_refseq": "tbc1d22b", "protein_names_uniprotkb": "TBC1 domain family member 22B isoform X1", "protein_names_refseq": "TBC1 domain family member 22B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:557377)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May act as a GTPase-activating protein for Rab family protein(s)., [UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity;GO:0071889 14-3-3 protein binding", "go_cellular_component": "GO:0005794 Golgi apparatus", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B1S8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B1X5-1", "uniprot_id": [ { "id": "A0A8M3B1X5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B1X5", "type": "external" } ], "mass": 40643.0, "length": 359, "protein_name": "DUF6729 domain-containing protein", "gene_name": "LOC103910680", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009298918", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298918", "type": "external" } ], "gene_names_uniprotkb": "LOC103910680", "gene_names_refseq": "LOC103910680", "protein_names_uniprotkb": "DUF6729 domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103910680)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_009298918.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B1X5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B217-1", "uniprot_id": [ { "id": "A0A8M3B217_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B217", "type": "external" } ], "mass": 39098.0, "length": 339, "protein_name": "C2H2-type domain-containing protein", "gene_name": "LOC101882667", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009299273", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299273", "type": "external" } ], "gene_names_uniprotkb": "LOC101882667", "gene_names_refseq": "LOC101882667", "protein_names_uniprotkb": "C2H2-type domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101882667)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B217-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B221-1", "uniprot_id": [ { "id": "A0A8M3B221_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B221", "type": "external" } ], "mass": 22193.0, "length": 190, "protein_name": "Uncharacterized protein si:cabz01032474.1", "gene_name": "si:cabz01032474.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:cabz01032474.1", "refseq_ac": [ { "id": "XP_009299296", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009299296", "type": "external" } ], "gene_names_uniprotkb": "si:cabz01032474.1", "gene_names_refseq": "si:cabz01032474.1", "protein_names_uniprotkb": "Uncharacterized protein si:cabz01032474.1", "protein_names_refseq": "uncharacterized protein si:cabz01032474.1", "tax_id": 7955, "disease": "", "pathway": " (dre:101884732)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009299296.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003700 DNA-binding transcription factor activity;GO:0008270 zinc ion binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006357 regulation of transcription by RNA polymerase II", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B221-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B297-1", "uniprot_id": [ { "id": "A0A8M3B297_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B297", "type": "external" } ], "mass": 164185.0, "length": 1367, "protein_name": "Uncharacterized protein", "gene_name": "LOC101884100", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009302539", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302539", "type": "external" } ], "gene_names_uniprotkb": "LOC101884100", "gene_names_refseq": "LOC101884100", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101884100)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B297-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2C3-1", "uniprot_id": [ { "id": "A0A8M3B2C3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2C3", "type": "external" } ], "mass": 42840.0, "length": 354, "protein_name": "Uncharacterized protein", "gene_name": "LOC103911582", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009302601", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302601", "type": "external" } ], "gene_names_uniprotkb": "LOC103911582", "gene_names_refseq": "LOC103911582", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103911582)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009302601.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2C3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2E6-1", "uniprot_id": [ { "id": "A0A8M3B2E6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2E6", "type": "external" } ], "mass": 90489.0, "length": 814, "protein_name": "Lysosomal cholesterol signaling protein", "gene_name": "gpr155a", "organism": "Zebrafish", "refseq_name": "lysosomal cholesterol signaling protein", "refseq_ac": [ { "id": "XP_005172576", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_005172576", "type": "external" } ], "gene_names_uniprotkb": "gpr155a", "gene_names_refseq": "gpr155a", "protein_names_uniprotkb": "Lysosomal cholesterol signaling protein", "protein_names_refseq": "lysosomal cholesterol signaling protein", "tax_id": 7955, "disease": "", "pathway": " (dre:100535239)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "E9QEQ9", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0055085 transmembrane transport;GO:0030514 negative regulation of BMP signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2E6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2F7-1", "uniprot_id": [ { "id": "A0A8M3B2F7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2F7", "type": "external" } ], "mass": 153194.0, "length": 1368, "protein_name": "NACHT, LRR and PYD domains-containing protein 3 isoform X1", "gene_name": "si:dkey-13n15.11", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "si:dkey-13n15.11", "gene_names_refseq": "", "protein_names_uniprotkb": "NACHT, LRR and PYD domains-containing protein 3 isoform X1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:562819)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2F7-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2N8-1", "uniprot_id": [ { "id": "A0A8M3B2N8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2N8", "type": "external" } ], "mass": 84510.0, "length": 743, "protein_name": "Envelope protein", "gene_name": "LOC100534830", "organism": "Zebrafish", "refseq_name": "uncharacterized LOC100534830 precursor", "refseq_ac": [ { "id": "NP_001429910", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429910", "type": "external" } ], "gene_names_uniprotkb": "LOC100534830", "gene_names_refseq": "LOC100534830", "protein_names_uniprotkb": "Envelope protein", "protein_names_refseq": "uncharacterized LOC100534830 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100534830)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588734.828844.1, SRR32588720.2438557.1 [ECO:0000332] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000009.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2N8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2P2-1", "uniprot_id": [ { "id": "A0A8M3B2P2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2P2", "type": "external" } ], "mass": 72538.0, "length": 651, "protein_name": "Leucine-rich repeat-containing protein 74A", "gene_name": "lrrc74a", "organism": "Zebrafish", "refseq_name": "leucine-rich repeat-containing protein 74A", "refseq_ac": [ { "id": "XP_009291611", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291611", "type": "external" } ], "gene_names_uniprotkb": "lrrc74a", "gene_names_refseq": "lrrc74a", "protein_names_uniprotkb": "Leucine-rich repeat-containing protein 74A", "protein_names_refseq": "leucine-rich repeat-containing protein 74A", "tax_id": 7955, "disease": "", "pathway": " (dre:101886467)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133192) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009291611.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005509 calcium ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2P2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2V0-1", "uniprot_id": [ { "id": "A0A8M3B2V0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2V0", "type": "external" } ], "mass": 77178.0, "length": 764, "protein_name": "SEA domain-containing protein", "gene_name": "LOC799879", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009291809", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291809", "type": "external" } ], "gene_names_uniprotkb": "LOC799879", "gene_names_refseq": "LOC799879", "protein_names_uniprotkb": "SEA domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:799879)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2V0-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2X6-1", "uniprot_id": [ { "id": "A0A8M3B2X6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2X6", "type": "external" } ], "mass": 28709.0, "length": 253, "protein_name": "RRM domain-containing protein", "gene_name": "LOC103908610", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009291892", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291892", "type": "external" } ], "gene_names_uniprotkb": "LOC103908610", "gene_names_refseq": "LOC103908610", "protein_names_uniprotkb": "RRM domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:103908610)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 24, 2016 this sequence version replaced XP_009291892.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2X6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2X7-1", "uniprot_id": [ { "id": "A0A8M3B2X7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2X7", "type": "external" } ], "mass": 66218.0, "length": 567, "protein_name": "Transcription termination factor 1.2", "gene_name": "ttf1.2", "organism": "Zebrafish", "refseq_name": "transcription termination factor 1.2", "refseq_ac": [ { "id": "NP_001353684", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001353684", "type": "external" } ], "gene_names_uniprotkb": "ttf1.2; si:ch73-376l24.6", "gene_names_refseq": "si:ch73-376l24.6; ttf1.2", "protein_names_uniprotkb": "Transcription termination factor 1.2", "protein_names_refseq": "transcription termination factor 1.2", "tax_id": 7955, "disease": "", "pathway": " (dre:100334190)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "26469318;27189481;34791311", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.4456574.1, SRR26395050.195225.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4476734, SAMEA4476737 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000005.1. On Oct 18, 2018 this sequence version replaced XP_009300203.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1R591", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M3B2X7-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2Y9-1", "uniprot_id": [ { "id": "A0A8M3B2Y9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2Y9", "type": "external" } ], "mass": 70170.0, "length": 622, "protein_name": "Uncharacterized protein si:ch73-90k17.1", "gene_name": "si:ch73-90k17.1", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch73-90k17.1", "refseq_ac": [ { "id": "XP_009291927", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291927", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-90k17.1", "gene_names_refseq": "si:ch73-90k17.1", "protein_names_uniprotkb": "Uncharacterized protein si:ch73-90k17.1", "protein_names_refseq": "uncharacterized protein si:ch73-90k17.1", "tax_id": 7955, "disease": "", "pathway": " (dre:100330497)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 6, "predicted_n_glycosites": 0, "predicted_o_glycosites": 6, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 6, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2Y9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B2Z8-1", "uniprot_id": [ { "id": "A0A8M3B2Z8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B2Z8", "type": "external" } ], "mass": 92636.0, "length": 832, "protein_name": "Extracellular calcium-sensing receptor-like", "gene_name": "olfcg8", "organism": "Zebrafish", "refseq_name": "extracellular calcium-sensing receptor-like", "refseq_ac": [ { "id": "XP_009291957", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009291957", "type": "external" } ], "gene_names_uniprotkb": "olfcg8", "gene_names_refseq": "olfcg8", "protein_names_uniprotkb": "Extracellular calcium-sensing receptor-like", "protein_names_refseq": "extracellular calcium-sensing receptor-like", "tax_id": 7955, "disease": "", "pathway": " (dre:100147924)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133193) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B2Z8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B380-1", "uniprot_id": [ { "id": "A0A8M3B380_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B380", "type": "external" } ], "mass": 38901.0, "length": 338, "protein_name": "Uncharacterized protein si:ch211-214k5.3", "gene_name": "si:ch211-214k5.3", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-214k5.3", "refseq_ac": [ { "id": "XP_009303575", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303575", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-214k5.3", "gene_names_refseq": "si:ch211-214k5.3", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-214k5.3", "protein_names_refseq": "uncharacterized protein si:ch211-214k5.3", "tax_id": 7955, "disease": "", "pathway": " (dre:100034611)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 8, 2024 this sequence version replaced XP_009303575.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0030246 carbohydrate binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B380-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B396-1", "uniprot_id": [ { "id": "A0A8M3B396_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B396", "type": "external" } ], "mass": 118425.0, "length": 1046, "protein_name": "Proto-oncogene DBL isoform X1", "gene_name": "mcf2b", "organism": "Zebrafish", "refseq_name": "proto-oncogene DBL isoform X1", "refseq_ac": [ { "id": "XP_009303604", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303604", "type": "external" } ], "gene_names_uniprotkb": "mcf2b", "gene_names_refseq": "mcf2b", "protein_names_uniprotkb": "Proto-oncogene DBL isoform X1", "protein_names_refseq": "proto-oncogene DBL isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:559907)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009303604.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0016358 dendrite development;GO:0035556 intracellular signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B396-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B3D5-1", "uniprot_id": [ { "id": "A0A8M3B3D5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B3D5", "type": "external" } ], "mass": 37446.0, "length": 326, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "si:dkey-266f7.4", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC565661", "refseq_ac": [ { "id": "NP_001093488", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001093488", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-266f7.4", "gene_names_refseq": "si:dkey-266f7.4", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC565661", "tax_id": 7955, "disease": "", "pathway": " (dre:565661)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588717.43841012.1, SRR32588730.24885398.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA708836, SAMN01765705 [ECO:0000348] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000019.1. On or before Aug 13, 2025 this sequence version replaced XP_009292325.1, NP_001093488.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B3D5-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B3J4-1", "uniprot_id": [ { "id": "A0A8M3B3J4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B3J4", "type": "external" } ], "mass": 60307.0, "length": 533, "protein_name": "Putative GTP-binding protein 6", "gene_name": "gtpbp6", "organism": "Zebrafish", "refseq_name": "putative GTP-binding protein 6 isoform X1", "refseq_ac": [ { "id": "XP_009300799", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300799", "type": "external" } ], "gene_names_uniprotkb": "gtpbp6", "gene_names_refseq": "gtpbp6", "protein_names_uniprotkb": "Putative GTP-binding protein 6", "protein_names_refseq": "putative GTP-binding protein 6 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:563225)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding;GO:0046872 metal ion binding;GO:0043022 ribosome binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B3J4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B3L3-1", "uniprot_id": [ { "id": "A0A8M3B3L3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B3L3", "type": "external" } ], "mass": 56650.0, "length": 521, "protein_name": "G-protein coupled receptor 22", "gene_name": "LOC100332423", "organism": "Zebrafish", "refseq_name": "G-protein coupled receptor 22", "refseq_ac": [ { "id": "XP_009300869", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300869", "type": "external" } ], "gene_names_uniprotkb": "LOC100332423", "gene_names_refseq": "LOC100332423", "protein_names_uniprotkb": "G-protein coupled receptor 22", "protein_names_refseq": "G-protein coupled receptor 22", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 5, "predicted_n_glycosites": 0, "predicted_o_glycosites": 5, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 5, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JVK7", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0032870 cellular response to hormone stimulus", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B3L3-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B3L9-1", "uniprot_id": [ { "id": "A0A8M3B3L9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B3L9", "type": "external" } ], "mass": 40658.0, "length": 356, "protein_name": "Trace amine-associated receptor 13c", "gene_name": "taar19o", "organism": "Zebrafish", "refseq_name": "trace amine-associated receptor 13c", "refseq_ac": [ { "id": "XP_009303913", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009303913", "type": "external" } ], "gene_names_uniprotkb": "taar19o", "gene_names_refseq": "taar19o", "protein_names_uniprotkb": "Trace amine-associated receptor 13c", "protein_names_refseq": "trace amine-associated receptor 13c", "tax_id": 7955, "disease": "", "pathway": " (dre:100003319)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133185) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009303913.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001594 trace-amine receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B3L9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B3Y2-1", "uniprot_id": [ { "id": "A0A8M3B3Y2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B3Y2", "type": "external" } ], "mass": 30722.0, "length": 278, "protein_name": "E3 ubiquitin-protein ligase RBBP6-like isoform X1", "gene_name": "si:dkey-23f9.12", "organism": "Zebrafish", "refseq_name": "E3 ubiquitin-protein ligase RBBP6-like isoform X1", "refseq_ac": [ { "id": "XP_009304145", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304145", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-23f9.12", "gene_names_refseq": "si:dkey-23f9.12", "protein_names_uniprotkb": "E3 ubiquitin-protein ligase RBBP6-like isoform X1", "protein_names_refseq": "E3 ubiquitin-protein ligase RBBP6-like isoform X1", "tax_id": 7955, "disease": "cancer (Disease Ontology:DOID:162)", "pathway": " (dre:100537692)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009304145.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0061630 ubiquitin protein ligase activity", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006397 mRNA processing;GO:0016567 protein ubiquitination", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B3Y2-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B405-1", "uniprot_id": [ { "id": "A0A8M3B405_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B405", "type": "external" } ], "mass": 31160.0, "length": 270, "protein_name": "Coiled-coil domain-containing protein 190 isoform X1", "gene_name": "ccdc190", "organism": "Zebrafish", "refseq_name": "coiled-coil domain-containing protein 190 isoform X1", "refseq_ac": [ { "id": "XP_009292891", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009292891", "type": "external" } ], "gene_names_uniprotkb": "ccdc190", "gene_names_refseq": "ccdc190", "protein_names_uniprotkb": "Coiled-coil domain-containing protein 190 isoform X1", "protein_names_refseq": "coiled-coil domain-containing protein 190 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:103909306)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133195) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B405-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B491-1", "uniprot_id": [ { "id": "A0A8M3B491_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B491", "type": "external" } ], "mass": 77123.0, "length": 680, "protein_name": "Uncharacterized protein il17rc", "gene_name": "il17rc", "organism": "Zebrafish", "refseq_name": "uncharacterized protein il17rc", "refseq_ac": [ { "id": "XP_009304517", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304517", "type": "external" } ], "gene_names_uniprotkb": "il17rc", "gene_names_refseq": "il17rc", "protein_names_uniprotkb": "Uncharacterized protein il17rc", "protein_names_refseq": "uncharacterized protein il17rc", "tax_id": 7955, "disease": "chronic mucocutaneous candidiasis (Disease Ontology:DOID:2058); interstitial lung disease (Disease Ontology:DOID:3082)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon. 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This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; May play a role in intracellular calcium sensing and homeostasis. May act as a negative regulator of plasma membrane calcium-transporting ATPases preventing calcium efflux from the cell., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0005789 endoplasmic reticulum membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B4E3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B4M0-1", "uniprot_id": [ { "id": "A0A8M3B4M0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B4M0", "type": "external" } ], "mass": 51162.0, "length": 450, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC101886821", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009304950", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009304950", "type": "external" } ], "gene_names_uniprotkb": "LOC101886821", "gene_names_refseq": "LOC101886821", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:101886821)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009304950.2. 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This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009293661.1. 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This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M3B4S8-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B4V4-1", "uniprot_id": [ { "id": "A0A8M3B4V4_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B4V4", "type": "external" } ], "mass": 48558.0, "length": 434, "protein_name": "non-specific serine/threonine protein kinase", "gene_name": "si:ch211-27e6.1", "organism": "Zebrafish", "refseq_name": "serine/threonine-protein kinase H2", "refseq_ac": [ { "id": "XP_009305164", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305164", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-27e6.1", "gene_names_refseq": "si:ch211-27e6.1", "protein_names_uniprotkb": "non-specific serine/threonine protein kinase; 2.7.11.1", "protein_names_refseq": "serine/threonine-protein kinase H2", "tax_id": 7955, "disease": "", "pathway": " (dre:566628)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009305164.3. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0004674 protein serine/threonine kinase activity;GO:0005524 ATP binding", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B4V4-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B4W2-1", "uniprot_id": [ { "id": "A0A8M3B4W2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B4W2", "type": "external" } ], "mass": 49854.0, "length": 452, "protein_name": "Uncharacterized protein si:ch73-329n5.6", "gene_name": "si:ch73-329n5.6", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch73-329n5.6", "refseq_ac": [ { "id": "XP_009305187", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305187", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-329n5.6", "gene_names_refseq": "si:ch73-329n5.6", "protein_names_uniprotkb": "Uncharacterized protein si:ch73-329n5.6", "protein_names_refseq": "uncharacterized protein si:ch73-329n5.6", "tax_id": 7955, "disease": "", "pathway": " (dre:101883339)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0007160 cell-matrix adhesion", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B4W2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B4W3-1", "uniprot_id": [ { "id": "A0A8M3B4W3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B4W3", "type": "external" } ], "mass": 30204.0, "length": 270, "protein_name": "RRM domain-containing protein", "gene_name": "LOC101887118", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009293810", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009293810", "type": "external" } ], "gene_names_uniprotkb": "LOC101887118", "gene_names_refseq": "LOC101887118", "protein_names_uniprotkb": "RRM domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101887118)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009293810.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B4W3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B540-1", "uniprot_id": [ { "id": "A0A8M3B540_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B540", "type": "external" } ], "mass": 57921.0, "length": 510, "protein_name": "Uncharacterized protein isoform X2", "gene_name": "zgc:174931", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100000633", "refseq_ac": [ { "id": "NP_001429616", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429616", "type": "external" } ], "gene_names_uniprotkb": "zgc:174931", "gene_names_refseq": "LOC100000633", "protein_names_uniprotkb": "Uncharacterized protein isoform X2", "protein_names_refseq": "uncharacterized protein LOC100000633", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000008.1., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58G7Z9", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B540-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B216-1", "uniprot_id": [ { "id": "A0A8M3B216_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B216", "type": "external" } ], "mass": 11366.0, "length": 100, "protein_name": "Uncharacterized protein", "gene_name": "LOC101882231", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009290958", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009290958", "type": "external" } ], "gene_names_uniprotkb": "LOC101882231", "gene_names_refseq": "LOC101882231", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101882231)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133191) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005576 extracellular region", "go_biological_process": "GO:0007218 neuropeptide signaling pathway;GO:0007217 tachykinin receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B216-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3ASB5-1", "uniprot_id": [ { "id": "A0A8M3ASB5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3ASB5", "type": "external" } ], "mass": 32592.0, "length": 291, "protein_name": "Latexin isoform X1", "gene_name": "lxn", "organism": "Zebrafish", "refseq_name": "latexin isoform X1", "refseq_ac": [ { "id": "XP_009289595", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009289595", "type": "external" } ], "gene_names_uniprotkb": "lxn; RARRES1; wu:fk66c02; zgc:103612", "gene_names_refseq": "RARRES1; lxn; wu:fk66c02; zgc:103612", "protein_names_uniprotkb": "Latexin isoform X1", "protein_names_refseq": "latexin isoform X1", "tax_id": 7955, "disease": "follicular lymphoma (Disease Ontology:DOID:0050873)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133190) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009289595.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008191 metalloendopeptidase inhibitor activity", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3ASB5-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6YXT9-1", "uniprot_id": [ { "id": "A0A8M6YXT9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6YXT9", "type": "external" } ], "mass": 41159.0, "length": 358, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC110439586", "organism": "Zebrafish", "refseq_name": "", "refseq_ac": [], "gene_names_uniprotkb": "LOC110439586", "gene_names_refseq": "", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "", "tax_id": 7955, "disease": "", "pathway": " (dre:110439586)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "May be involved in transcriptional regulation., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58JBR2", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding;GO:0008270 zinc ion binding;GO:0042802 identical protein binding;GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006351 DNA-templated transcription;GO:0006355 regulation of DNA-templated transcription", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6YXT9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PWZ2-1", "uniprot_id": [ { "id": "A0A8M9PWZ2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PWZ2", "type": "external" } ], "mass": 131292.0, "length": 1196, "protein_name": "Uncharacterized protein si:ch211-14k19.8 isoform X1", "gene_name": "vap", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-14k19.8 isoform X1", "refseq_ac": [ { "id": "XP_021326786", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021326786", "type": "external" } ], "gene_names_uniprotkb": "vap; si:ch211-14k19.8", "gene_names_refseq": "si:ch211-14k19.8", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-14k19.8 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch211-14k19.8 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:567378)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133176) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "GO:0001525 angiogenesis;GO:0030218 erythrocyte differentiation;GO:0042541 hemoglobin biosynthetic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PWZ2-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3BA19-1", "uniprot_id": [ { "id": "A0A8M3BA19_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3BA19", "type": "external" } ], "mass": 89117.0, "length": 805, "protein_name": "Disks large homolog 4 isoform X1", "gene_name": "dlg4a", "organism": "Zebrafish", "refseq_name": "disks large homolog 4 isoform X1", "refseq_ac": [ { "id": "XP_009300293", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300293", "type": "external" } ], "gene_names_uniprotkb": "dlg4a", "gene_names_refseq": "dlg4a", "protein_names_uniprotkb": "Disks large homolog 4 isoform X1", "protein_names_refseq": "disks large homolog 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100000823)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133180) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0019900 kinase binding", "go_cellular_component": "GO:0016020 membrane;GO:0031594 neuromuscular junction;GO:0043005 neuron projection", "go_biological_process": "GO:0007268 chemical synaptic transmission", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3BA19-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PTM9-1", "uniprot_id": [ { "id": "A0A8M9PTM9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PTM9", "type": "external" } ], "mass": 43589.0, "length": 383, "protein_name": "Galanin receptor 2a-like", "gene_name": "LOC110438944", "organism": "Zebrafish", "refseq_name": "galanin receptor 2a-like", "refseq_ac": [ { "id": "XP_021328259", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021328259", "type": "external" } ], "gene_names_uniprotkb": "LOC110438944", "gene_names_refseq": "LOC110438944", "protein_names_uniprotkb": "Galanin receptor 2a-like", "protein_names_refseq": "galanin receptor 2a-like", "tax_id": 7955, "disease": "", "pathway": " (dre:110438944)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021328259.2. COMPLETENESS: full length., [RefSeq]; Receptor for the hormone galanin. Receptor for the hormones spexin-1 and spexin-2., [UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0A8M9QJA4", "ec_number_list": [], "go_molecular_function": "GO:0004930 G protein-coupled receptor activity;GO:0004966 galanin receptor activity", "go_cellular_component": "GO:0005886 plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PTM9-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PU72-1", "uniprot_id": [ { "id": "A0A8M9PU72_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PU72", "type": "external" } ], "mass": 179800.0, "length": 1611, "protein_name": "Uncharacterized protein psda isoform X1", "gene_name": "psda", "organism": "Zebrafish", "refseq_name": "uncharacterized protein psda isoform X1", "refseq_ac": [ { "id": "XP_009305653", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305653", "type": "external" } ], "gene_names_uniprotkb": "psda", "gene_names_refseq": "psda", "protein_names_uniprotkb": "Uncharacterized protein psda isoform X1", "protein_names_refseq": "uncharacterized protein psda isoform X1", "tax_id": 7955, "disease": "alcohol use disorder (Disease Ontology:DOID:1574)", "pathway": " (dre:570918)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005543 phospholipid binding;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "GO:0032587 ruffle membrane", "go_biological_process": "GO:0032012 regulation of ARF protein signal transduction;GO:0016192 vesicle-mediated transport", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PU72-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PW91-1", "uniprot_id": [ { "id": "A0A8M9PW91_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PW91", "type": "external" } ], "mass": 27375.0, "length": 234, "protein_name": "Regulator of G-protein signaling 19 isoform X1", "gene_name": "rgs19", "organism": "Zebrafish", "refseq_name": "regulator of G-protein signaling 19 isoform X1", "refseq_ac": [ { "id": "XP_021325390", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325390", "type": "external" } ], "gene_names_uniprotkb": "rgs19; zgc:194426", "gene_names_refseq": "rgs19; zgc:194426", "protein_names_uniprotkb": "Regulator of G-protein signaling 19 isoform X1", "protein_names_refseq": "regulator of G-protein signaling 19 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100170801)", "pathway_count": 1, "publication_count": 3, "publication_id_list": "16754745;20463905;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]; Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins., [UniProtKB, UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005096 GTPase activator activity", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm;GO:0016020 membrane;GO:0009898 cytoplasmic side of plasma membrane", "go_biological_process": "GO:0007186 G protein-coupled receptor signaling pathway;GO:0009968 negative regulation of signal transduction;GO:0045744 negative regulation of G protein-coupled receptor signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M9PW91-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B6A1-1", "uniprot_id": [ { "id": "A0A8M3B6A1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B6A1", "type": "external" } ], "mass": 222808.0, "length": 2022, "protein_name": "Zinc finger protein castor homolog 1 isoform X1", "gene_name": "casz1", "organism": "Zebrafish", "refseq_name": "zinc finger protein castor homolog 1 isoform X1", "refseq_ac": [ { "id": "XP_009295241", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295241", "type": "external" } ], "gene_names_uniprotkb": "casz1", "gene_names_refseq": "casz1", "protein_names_uniprotkb": "Zinc finger protein castor homolog 1 isoform X1", "protein_names_refseq": "zinc finger protein castor homolog 1 isoform X1", "tax_id": 7955, "disease": "chromosome 1p36 deletion syndrome (Disease Ontology:DOID:0060410)", "pathway": " (dre:559053)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding;GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific", "go_cellular_component": "GO:0005634 nucleus", "go_biological_process": "GO:0006355 regulation of DNA-templated transcription;GO:0045944 positive regulation of transcription by RNA polymerase II;GO:0045664 regulation of neuron differentiation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B6A1-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PU52-1", "uniprot_id": [ { "id": "A0A8M9PU52_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PU52", "type": "external" } ], "mass": 200637.0, "length": 1838, "protein_name": "La-related protein 4B isoform X1", "gene_name": "larp4b", "organism": "Zebrafish", "refseq_name": "la-related protein 4B isoform X1", "refseq_ac": [ { "id": "XP_021325871", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021325871", "type": "external" } ], "gene_names_uniprotkb": "larp4b; zgc:153918", "gene_names_refseq": "larp4b; zgc:153918", "protein_names_uniprotkb": "La-related protein 4B isoform X1", "protein_names_refseq": "la-related protein 4B isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_021325871.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003723 RNA binding;GO:0003730 mRNA 3'-UTR binding", "go_cellular_component": "GO:0005829 cytosol;GO:0010494 cytoplasmic stress granule", "go_biological_process": "GO:0045727 positive regulation of translation", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PU52-1", "record_type": "protein", "filter_code": "0000000.0000000.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6YY64-1", "uniprot_id": [ { "id": "A0A8M6YY64_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6YY64", "type": "external" } ], "mass": 47699.0, "length": 427, "protein_name": "Proline-rich protein 5 isoform X1", "gene_name": "prr5b", "organism": "Zebrafish", "refseq_name": "proline-rich protein 5 isoform X1", "refseq_ac": [ { "id": "XP_017210725", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017210725", "type": "external" } ], "gene_names_uniprotkb": "prr5b", "gene_names_refseq": "prr5b", "protein_names_uniprotkb": "Proline-rich protein 5 isoform X1", "protein_names_refseq": "proline-rich protein 5 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100537865)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0031932 TORC2 complex", "go_biological_process": "GO:0038203 TORC2 signaling", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6YY64-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6YV87-1", "uniprot_id": [ { "id": "A0A8M6YV87_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6YV87", "type": "external" } ], "mass": 102054.0, "length": 880, "protein_name": "Guanine nucleotide exchange factor VAV2 isoform X1", "gene_name": "vav2", "organism": "Zebrafish", "refseq_name": "guanine nucleotide exchange factor VAV2 isoform X1", "refseq_ac": [ { "id": "XP_017208431", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_017208431", "type": "external" } ], "gene_names_uniprotkb": "vav2", "gene_names_refseq": "vav2", "protein_names_uniprotkb": "Guanine nucleotide exchange factor VAV2 isoform X1", "protein_names_refseq": "guanine nucleotide exchange factor VAV2 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:556413)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133196) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_017208431.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0008270 zinc ion binding;GO:0005085 guanyl-nucleotide exchange factor activity", "go_cellular_component": "", "go_biological_process": "GO:0035556 intracellular signal transduction;GO:0033334 fin morphogenesis", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M6YV87-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M6YV30-1", "uniprot_id": [ { "id": "A0A8M6YV30_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M6YV30", "type": "external" } ], "mass": 179398.0, "length": 1627, "protein_name": "Uncharacterized protein LOC553495; Uncharacterized protein isoform X1", "gene_name": "im:7160152; wu:fc57d05; zgc:162472", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC553495", "refseq_ac": [ { "id": "NP_001417743", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001417743", "type": "external" } ], "gene_names_uniprotkb": "im:7160152; wu:fc57d05; zgc:162472; im:7160152; wu:fc57d05; zgc:162472", "gene_names_refseq": "im:7160152; wu:fc57d05; zgc:162472", "protein_names_uniprotkb": "Uncharacterized protein LOC553495; Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC553495", "tax_id": 7955, "disease": "autosomal recessive nonsyndromic deafness 112 (Disease Ontology:DOID:0111637)", "pathway": " (dre:553495)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;35991544", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: GFIL01043598.1, SRR32588732.18109813.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505372 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000021.1. On May 29, 2024 this sequence version replaced XP_005161078.1., [RefSeq]", "predicted_glycosites": 2, "predicted_n_glycosites": 0, "predicted_o_glycosites": 2, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 2, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0001156 TFIIIC-class transcription factor complex binding", "go_cellular_component": "GO:0000126 transcription factor TFIIIB complex", "go_biological_process": "GO:0070898 RNA polymerase III preinitiation complex assembly", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M6YV30-1", "record_type": "protein", "filter_code": "0000000.0000111.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B6S1-1", "uniprot_id": [ { "id": "A0A8M3B6S1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B6S1", "type": "external" } ], "mass": 61547.0, "length": 545, "protein_name": "Netrin-G1 isoform X1", "gene_name": "ntng1a", "organism": "Zebrafish", "refseq_name": "netrin-G1 isoform X1", "refseq_ac": [ { "id": "XP_009295804", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295804", "type": "external" } ], "gene_names_uniprotkb": "ntng1a", "gene_names_refseq": "ntng1a", "protein_names_uniprotkb": "Netrin-G1 isoform X1", "protein_names_refseq": "netrin-G1 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:569075)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133199) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_009295804.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58IRX2", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005604 basement membrane", "go_biological_process": "GO:0007409 axonogenesis;GO:0009887 animal organ morphogenesis;GO:0009888 tissue development", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B6S1-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B6F5-1", "uniprot_id": [ { "id": "A0A8M3B6F5_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B6F5", "type": "external" } ], "mass": 77502.0, "length": 704, "protein_name": "Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1", "gene_name": "si:ch73-217n20.1", "organism": "Zebrafish", "refseq_name": "sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1", "refseq_ac": [ { "id": "XP_009295403", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009295403", "type": "external" } ], "gene_names_uniprotkb": "si:ch73-217n20.1", "gene_names_refseq": "si:ch73-217n20.1", "protein_names_uniprotkb": "Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1", "protein_names_refseq": "sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1", "tax_id": 7955, "disease": "COVID-19 (Disease Ontology:DOID:0080600); prostate cancer (Disease Ontology:DOID:10283); protein-losing enteropathy (Disease Ontology:DOID:10611); breast cancer (Disease Ontology:DOID:1612); endometrial adenocarcinoma (Disease Ontology:DOID:2870); cervical cancer (Disease Ontology:DOID:4362)", "pathway": " (dre:100329788)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133198) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009295403.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 6, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0003677 DNA binding", "go_cellular_component": "", "go_biological_process": "GO:0015074 DNA integration;GO:0006313 DNA transposition", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B6F5-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B6Y1-1", "uniprot_id": [ { "id": "A0A8M3B6Y1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B6Y1", "type": "external" } ], "mass": 91030.0, "length": 824, "protein_name": "von Willebrand factor A domain-containing protein 5A isoform X1", "gene_name": "si:ch1073-340j19.1", "organism": "Zebrafish", "refseq_name": "von Willebrand factor A domain-containing protein 5A isoform X1", "refseq_ac": [ { "id": "XP_009296021", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296021", "type": "external" } ], "gene_names_uniprotkb": "si:ch1073-340j19.1", "gene_names_refseq": "si:ch1073-340j19.1", "protein_names_uniprotkb": "von Willebrand factor A domain-containing protein 5A isoform X1", "protein_names_refseq": "von Willebrand factor A domain-containing protein 5A isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100002600)", "pathway_count": 1, "publication_count": 1, "publication_id_list": "40044042", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133200) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 1, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 1, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 1, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 1, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 0, "biomarker_type": "", "glycan_count": 1, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.4, "record_id": "A0A8M3B6Y1-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0100000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B7R8-1", "uniprot_id": [ { "id": "A0A8M3B7R8_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B7R8", "type": "external" } ], "mass": 16654.0, "length": 146, "protein_name": "Uncharacterized protein si:ch211-106h4.12 isoform X1", "gene_name": "si:ch211-106h4.12", "organism": "Zebrafish", "refseq_name": "uncharacterized protein si:ch211-106h4.12 isoform X1", "refseq_ac": [ { "id": "XP_009296868", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009296868", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-106h4.12", "gene_names_refseq": "si:ch211-106h4.12", "protein_names_uniprotkb": "Uncharacterized protein si:ch211-106h4.12 isoform X1", "protein_names_refseq": "uncharacterized protein si:ch211-106h4.12 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:561742)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133177) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B7R8-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B8G6-1", "uniprot_id": [ { "id": "A0A8M3B8G6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B8G6", "type": "external" } ], "mass": 248121.0, "length": 2246, "protein_name": "Protein sidekick-1 isoform X1", "gene_name": "sdk1a", "organism": "Zebrafish", "refseq_name": "protein sidekick-1 isoform X1", "refseq_ac": [ { "id": "XP_009297968", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009297968", "type": "external" } ], "gene_names_uniprotkb": "sdk1a", "gene_names_refseq": "sdk1a", "protein_names_uniprotkb": "Protein sidekick-1 isoform X1", "protein_names_refseq": "protein sidekick-1 isoform X1", "tax_id": 7955, "disease": "obesity (Disease Ontology:DOID:9970)", "pathway": " (dre:558391)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009297968.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005886 plasma membrane;GO:0045202 synapse", "go_biological_process": "GO:0007155 cell adhesion;GO:0007416 synapse assembly;GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B8G6-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B8Z1-1", "uniprot_id": [ { "id": "A0A8M3B8Z1_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B8Z1", "type": "external" } ], "mass": 156680.0, "length": 1429, "protein_name": "Bridge-like lipid transfer protein family member 3B isoform X1", "gene_name": "bltp3b", "organism": "Zebrafish", "refseq_name": "bridge-like lipid transfer protein family member 3B isoform X1", "refseq_ac": [ { "id": "XP_009298565", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298565", "type": "external" } ], "gene_names_uniprotkb": "bltp3b; si:dkeyp-90a8.1; uhrf1bp1l", "gene_names_refseq": "bltp3b; si:dkeyp-90a8.1; uhrf1bp1l", "protein_names_uniprotkb": "Bridge-like lipid transfer protein family member 3B isoform X1", "protein_names_refseq": "bridge-like lipid transfer protein family member 3B isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:562208)", "pathway_count": 1, "publication_count": 2, "publication_id_list": "26469318;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 1, "predicted_n_glycosites": 0, "predicted_o_glycosites": 1, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 1, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M3B8Z1-1", "record_type": "protein", "filter_code": "0000000.0000101.010000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B930-1", "uniprot_id": [ { "id": "A0A8M3B930_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B930", "type": "external" } ], "mass": 69758.0, "length": 606, "protein_name": "GRAM domain-containing protein 4 isoform X1", "gene_name": "gramd4a", "organism": "Zebrafish", "refseq_name": "GRAM domain-containing protein 4 isoform X1", "refseq_ac": [ { "id": "XP_009298731", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009298731", "type": "external" } ], "gene_names_uniprotkb": "gramd4a", "gene_names_refseq": "gramd4a", "protein_names_uniprotkb": "GRAM domain-containing protein 4 isoform X1", "protein_names_refseq": "GRAM domain-containing protein 4 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:558571)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133179) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "GO:0006915 apoptotic process;GO:0034164 negative regulation of toll-like receptor 9 signaling pathway", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B930-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3BAK2-1", "uniprot_id": [ { "id": "A0A8M3BAK2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3BAK2", "type": "external" } ], "mass": 62063.0, "length": 555, "protein_name": "Solute carrier family 2, facilitated glucose transporter member 5", "gene_name": "slc2a11a", "organism": "Zebrafish", "refseq_name": "solute carrier family 2, facilitated glucose transporter member 11 isoform X1", "refseq_ac": [ { "id": "XP_009300884", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009300884", "type": "external" } ], "gene_names_uniprotkb": "slc2a11a", "gene_names_refseq": "slc2a11a", "protein_names_uniprotkb": "Solute carrier family 2, facilitated glucose transporter member 5; Fructose transporter; Glucose transporter type 5, small intestine", "protein_names_refseq": "solute carrier family 2, facilitated glucose transporter member 11 isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:560358)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133181) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009302930.1. 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This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009304364.1. 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This record is derived from a genomic sequence (NC_133178) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005525 GTP binding", "go_cellular_component": "GO:0005634 nucleus;GO:0005737 cytoplasm", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M9PTV9-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M9PVJ7-1", "uniprot_id": [ { "id": "A0A8M9PVJ7_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M9PVJ7", "type": "external" } ], "mass": 179477.0, "length": 1630, "protein_name": "Actin remodeling regulator NHS isoform X1", "gene_name": "nhsb", "organism": "Zebrafish", "refseq_name": "actin remodeling regulator NHS isoform X1", "refseq_ac": [ { "id": "XP_021335532", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021335532", "type": "external" } ], "gene_names_uniprotkb": "nhsb", "gene_names_refseq": "nhsb", "protein_names_uniprotkb": "Actin remodeling regulator NHS isoform X1", "protein_names_refseq": "actin remodeling regulator NHS isoform X1", "tax_id": 7955, "disease": "Nance-Horan syndrome (Disease Ontology:DOID:0060599); cataract 40 (Disease Ontology:DOID:0110272)", "pathway": " (dre:559636)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133186) annotated using gene prediction method: Gnomon, supported by EST evidence. 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This record is derived from a genomic sequence (NC_133187) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0005737 cytoplasm", "go_biological_process": "GO:0007165 signal transduction", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B7H5-1", "record_type": "protein", "filter_code": "0000000.0000001.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B5F0-1", "uniprot_id": [ { "id": "A0A8M3B5F0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B5F0", "type": "external" } ], "mass": 99082.0, "length": 889, "protein_name": "Phosphofurin acidic cluster sorting protein 2 isoform X1", "gene_name": "pacs2", "organism": "Zebrafish", "refseq_name": "phosphofurin acidic cluster sorting protein 2 isoform X1", "refseq_ac": [ { "id": "XP_009305758", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009305758", "type": "external" } ], "gene_names_uniprotkb": "pacs2", "gene_names_refseq": "pacs2", "protein_names_uniprotkb": "Phosphofurin acidic cluster sorting protein 2 isoform X1", "protein_names_refseq": "phosphofurin acidic cluster sorting protein 2 isoform X1", "tax_id": 7955, "disease": "developmental and epileptic encephalopathy 66 (Disease Ontology:DOID:0080446)", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 3, "predicted_n_glycosites": 0, "predicted_o_glycosites": 3, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 3, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0044325 transmembrane transporter binding", "go_cellular_component": "", "go_biological_process": "GO:0072659 protein localization to plasma membrane", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B5F0-1", "record_type": "protein", "filter_code": "0000000.0000010.100000.000000000000000001.0000000001000.001.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B812-1", "uniprot_id": [ { "id": "A0A8M3B812_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B812", "type": "external" } ], "mass": 64342.0, "length": 569, "protein_name": "Uncharacterized protein LOC100007703 precursor; Uncharacterized protein isoform X1", "gene_name": "si:ch1073-464p5.2; wu:fb61g08; zgc:153921", "organism": "Zebrafish", "refseq_name": "uncharacterized protein LOC100007703 precursor", "refseq_ac": [ { "id": "NP_001104722", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001104722", "type": "external" } ], "gene_names_uniprotkb": "si:ch1073-464p5.2; wu:fb61g08; zgc:153921; wu:fb61g08; wu:fd58d10; zgc:153921", "gene_names_refseq": "wu:fb61g08; wu:fd58d10; zgc:153921", "protein_names_uniprotkb": "Uncharacterized protein LOC100007703 precursor; Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein LOC100007703 precursor", "tax_id": 7955, "disease": "", "pathway": " (dre:100007703); (dre:791500)", "pathway_count": 2, "publication_count": 2, "publication_id_list": "16631158;27189481", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: BC154125.1, SRR32588726.3055304.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505382 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000003.1. On Sep 15, 2018 this sequence version replaced NP_001104722.1. Sequence Note: The RefSeq transcript and protein were derived from genomic sequence to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on alignments., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "F1QNL8", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.3, "record_id": "A0A8M3B812-1", "record_type": "protein", "filter_code": "0000000.0000101.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B5B0-1", "uniprot_id": [ { "id": "A0A8M3B5B0_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B5B0", "type": "external" } ], "mass": 69585.0, "length": 634, "protein_name": "Interleukin-17 receptor C isoform X1", "gene_name": "wu:fl23c11", "organism": "Zebrafish", "refseq_name": "interleukin-17 receptor C isoform X1", "refseq_ac": [ { "id": "XP_009302640", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302640", "type": "external" } ], "gene_names_uniprotkb": "wu:fl23c11; wu:fl23c11", "gene_names_refseq": "wu:fl23c11", "protein_names_uniprotkb": "Interleukin-17 receptor C isoform X1", "protein_names_refseq": "interleukin-17 receptor C isoform X1", "tax_id": 7955, "disease": "chronic mucocutaneous candidiasis (Disease Ontology:DOID:2058); interstitial lung disease (Disease Ontology:DOID:3082)", "pathway": " (dre:335307)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133183) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58GCI0;A0AC58GCI1;A0AC58GCI8;A0AC58GCJ1;A0AC58GCJ2;A0AC58GCJ6;A0AC58GCK1", "ec_number_list": [], "go_molecular_function": "GO:0030368 interleukin-17 receptor activity", "go_cellular_component": "GO:0016020 membrane", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B5B0-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B5C3-1", "uniprot_id": [ { "id": "A0A8M3B5C3_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B5C3", "type": "external" } ], "mass": 81797.0, "length": 718, "protein_name": "Uncharacterized protein isoform X1", "gene_name": "LOC100006875", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_001345491", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001345491", "type": "external" } ], "gene_names_uniprotkb": "LOC100006875", "gene_names_refseq": "LOC100006875", "protein_names_uniprotkb": "Uncharacterized protein isoform X1", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "", "pathway": " (dre:100006875)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 1, 2013 this sequence version replaced XP_001345491.4. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B5C3-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B5C6-1", "uniprot_id": [ { "id": "A0A8M3B5C6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B5C6", "type": "external" } ], "mass": 44119.0, "length": 402, "protein_name": "Ig-like domain-containing protein", "gene_name": "LOC101886679", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_009294355", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294355", "type": "external" } ], "gene_names_uniprotkb": "LOC101886679", "gene_names_refseq": "LOC101886679", "protein_names_uniprotkb": "Ig-like domain-containing protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:101886679)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009294355.1. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B5C6-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B5D2-1", "uniprot_id": [ { "id": "A0A8M3B5D2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B5D2", "type": "external" } ], "mass": 43993.0, "length": 382, "protein_name": "Uncharacterized protein", "gene_name": "LOC110440185", "organism": "Zebrafish", "refseq_name": "uncharacterized protein", "refseq_ac": [ { "id": "XP_021336545", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_021336545", "type": "external" } ], "gene_names_uniprotkb": "LOC110440185", "gene_names_refseq": "LOC110440185", "protein_names_uniprotkb": "Uncharacterized protein", "protein_names_refseq": "uncharacterized protein", "tax_id": 7955, "disease": "", "pathway": " (dre:110440185)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "", "go_biological_process": "", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B5D2-1", "record_type": "protein", "filter_code": "0000000.0000001.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B5E2-1", "uniprot_id": [ { "id": "A0A8M3B5E2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B5E2", "type": "external" } ], "mass": 28224.0, "length": 252, "protein_name": "CD276 antigen isoform X1", "gene_name": "si:dkey-71p21.13", "organism": "Zebrafish", "refseq_name": "CD276 antigen isoform X1", "refseq_ac": [ { "id": "XP_001339740", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_001339740", "type": "external" } ], "gene_names_uniprotkb": "si:dkey-71p21.13", "gene_names_refseq": "si:dkey-71p21.13", "protein_names_uniprotkb": "CD276 antigen isoform X1", "protein_names_refseq": "CD276 antigen isoform X1", "tax_id": 7955, "disease": "", "pathway": "", "pathway_count": 0, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133188) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Sep 24, 2014 this sequence version replaced XP_001339740.2. COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 0, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "A0AC58H2P2", "ec_number_list": [], "go_molecular_function": "GO:0005102 signaling receptor binding", "go_cellular_component": "GO:0009897 external side of plasma membrane", "go_biological_process": "GO:0050852 T cell receptor signaling pathway;GO:0001817 regulation of cytokine production", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B5E2-1", "record_type": "protein", "filter_code": "0000000.0000000.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B8C2-1", "uniprot_id": [ { "id": "A0A8M3B8C2_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B8C2", "type": "external" } ], "mass": 189790.0, "length": 1732, "protein_name": "Biorientation of chromosomes in cell division protein 1-like 1 isoform X1", "gene_name": "bod1l1", "organism": "Zebrafish", "refseq_name": "biorientation of chromosomes in cell division 1-like 1 isoform 1", "refseq_ac": [ { "id": "NP_001429346", "url": "https://www.ncbi.nlm.nih.gov/protein/NP_001429346", "type": "external" } ], "gene_names_uniprotkb": "bod1l1", "gene_names_refseq": "bod1l1", "protein_names_uniprotkb": "Biorientation of chromosomes in cell division protein 1-like 1 isoform X1", "protein_names_refseq": "biorientation of chromosomes in cell division 1-like 1 isoform 1", "tax_id": 7955, "disease": "intellectual disability (Disease Ontology:DOID:1059)", "pathway": " (dre:100332682)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Evidence-Data-START## Transcript exon combination :: SRR32588729.22798792.1, SRR26395028.1203885.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA3505370, SAMEA3505371 [ECO:0006172] ##Evidence-Data-END## VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from JBMGRA010000014.1. On Aug 5, 2025 this sequence version replaced XP_009305901.1., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 1, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "", "go_cellular_component": "GO:0048188 Set1C/COMPASS complex", "go_biological_process": "GO:0031297 replication fork processing", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B8C2-1", "record_type": "protein", "filter_code": "0000000.0000011.010000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B5K9-1", "uniprot_id": [ { "id": "A0A8M3B5K9_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B5K9", "type": "external" } ], "mass": 47998.0, "length": 477, "protein_name": "ATP synthase peripheral stalk subunit F6, mitochondrial", "gene_name": "si:ch211-140m22.7", "organism": "Zebrafish", "refseq_name": "uncharacterized protein isoform X1", "refseq_ac": [ { "id": "XP_009302913", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009302913", "type": "external" } ], "gene_names_uniprotkb": "si:ch211-140m22.7", "gene_names_refseq": "si:ch211-140m22.7", "protein_names_uniprotkb": "ATP synthase peripheral stalk subunit F6, mitochondrial; ATP synthase peripheral stalk subunit F6", "protein_names_refseq": "uncharacterized protein isoform X1", "tax_id": 7955, "disease": "essential hypertension (Disease Ontology:DOID:10825); pulmonary hypertension (Disease Ontology:DOID:6432)", "pathway": " (dre:570370)", "pathway_count": 1, "publication_count": 4, "publication_id_list": "15520368;26469318;27189481;28252024", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133184) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process On May 12, 2025 this sequence version replaced XP_009302913.1. COMPLETENESS: full length., [RefSeq]; Subunit F6, of the mitochondrial membrane ATP synthase complex (F(1)F(0) ATP synthase or Complex V) that produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. ATP synthase complex consist of a soluble F(1) head domain - the catalytic core - and a membrane F(1) domain - the membrane proton channel. These two domains are linked by a central stalk rotating inside the F(1) region and a stationary peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. In vivo, can only synthesize ATP although its ATP hydrolase activity can be activated artificially in vitro. Part of the complex F(0) domain. Part of the complex F(0) domain and the peripheric stalk, which acts as a stator to hold the catalytic alpha(3)beta(3) subcomplex and subunit a/ATP6 static relative to the rotary elements., [UniProtKB, UniProtKB, UniProtKB, UniProtKB]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0015078 proton transmembrane transporter activity", "go_cellular_component": "GO:0005743 mitochondrial inner membrane;GO:0045259 proton-transporting ATP synthase complex", "go_biological_process": "GO:0015986 proton motive force-driven ATP synthesis", "synthesized_glycan_count": 0, "hit_score": 0.5, "record_id": "A0A8M3B5K9-1", "record_type": "protein", "filter_code": "0000000.0000111.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true }, { "uniprot_canonical_ac": "A0A8M3B5L6-1", "uniprot_id": [ { "id": "A0A8M3B5L6_DANRE", "url": "https://www.uniprot.org/uniprot/A0A8M3B5L6", "type": "external" } ], "mass": 77043.0, "length": 701, "protein_name": "Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1", "gene_name": "pip5k1ca", "organism": "Zebrafish", "refseq_name": "phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1", "refseq_ac": [ { "id": "XP_009294612", "url": "https://www.ncbi.nlm.nih.gov/protein/XP_009294612", "type": "external" } ], "gene_names_uniprotkb": "pip5k1ca", "gene_names_refseq": "pip5k1ca", "protein_names_uniprotkb": "Phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1", "protein_names_refseq": "phosphatidylinositol 4-phosphate 5-kinase type-1 gamma isoform X1", "tax_id": 7955, "disease": "lethal congenital contracture syndrome 3 (Disease Ontology:DOID:0060653); cancer (Disease Ontology:DOID:162)", "pathway": " (dre:798876)", "pathway_count": 1, "publication_count": 0, "publication_id_list": "", "class_list": "", "function": "##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049306965.1-RS_2025_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/11/2025 ##Genome-Annotation-Data-END## MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133197) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process COMPLETENESS: full length., [RefSeq]", "predicted_glycosites": 0, "predicted_n_glycosites": 0, "predicted_o_glycosites": 0, "predicted_c_glycosites": 0, "predicted_s_glycosites": 0, "mined_glycosites": 0, "mined_n_glycosites": 0, "mined_o_glycosites": 0, "mined_c_glycosites": 0, "mined_s_glycosites": 0, "reported_n_glycosites": 0, "reported_o_glycosites": 0, "reported_c_glycosites": 0, "reported_s_glycosites": 0, "reported_n_glycosites_with_glycan": 0, "reported_o_glycosites_with_glycan": 0, "reported_c_glycosites_with_glycan": 0, "reported_s_glycosites_with_glycan": 0, "total_reported_n_glycosites": 0, "total_reported_o_glycosites": 0, "total_reported_c_glycosites": 0, "total_reported_s_glycosites": 0, "total_n_glycosites": 0, "total_o_glycosites": 0, "total_c_glycosites": 0, "total_s_glycosites": 0, "reported_fully_resolved_glycans": 0, "reported_phosphosites": 0, "reported_mutagensis": 0, "reported_glycation": 0, "reported_snv": 0, "reported_interactions": 0, "missing_score": 10000, "biomarker_type": "", "glycan_count": 0, "disease_count": 2, "glyco_site_count": 0, "binding_glycan_count": 0, "secondary_ac_list": "", "ec_number_list": [], "go_molecular_function": "GO:0005524 ATP binding;GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity;GO:0052742 phosphatidylinositol kinase activity", "go_cellular_component": "GO:0005737 cytoplasm;GO:0005886 plasma membrane", "go_biological_process": "GO:0046854 phosphatidylinositol phosphate biosynthetic process;GO:0046488 phosphatidylinositol metabolic process", "synthesized_glycan_count": 0, "hit_score": 0.1, "record_id": "A0A8M3B5L6-1", "record_type": "protein", "filter_code": "0000000.0000011.100000.000000000000000001.0000000000000.000.00000", "kg_view_protein": true } ]